209 lines
22 KiB
XML
209 lines
22 KiB
XML
<document id="FD872367CA5AF02E2AA33EE2638EE915" ID-CLB-Dataset="278721" ID-DOI="10.11646/phytotaxa.626.3.4" ID-GBIF-Dataset="2a08495a-f90d-406e-9bf5-dbef1349eaec" ID-ISSN="1179-3163" ID-Zenodo-Dep="10200325" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="felipe" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="GgImagineBatch" IM.taxonomicNames_approvedBy="felipe" IM.treatments_approvedBy="felipe" checkinTime="1700733214062" checkinUser="plazi" docAuthor="Li, Shu-Yin, Xu, Yuan-Zhao, Guo, Wen-Si, Zhu, Huan & Liu, Guo-Xiang" docDate="2023" docId="03E4B155D540FFD4CFBB38A62DC3FBAB" docLanguage="en" docName="phytotaxa.626.3.4.pdf" docOrigin="Phytotaxa 626 (3)" docSource="https://phytotaxa.mapress.com/pt/article/download/phytotaxa.626.3.4/51309" docStyle="DocumentStyle:96748F8F1B6C902996E134952A3A36B9.7:Phytotaxa.2014-.journal_article" docStyleId="96748F8F1B6C902996E134952A3A36B9" docStyleName="Phytotaxa.2014-.journal_article" docStyleVersion="7" docTitle="Obliquicauda xianninga S. Y. Li & G. X. Liu 2023, sp. nov." docType="treatment" docVersion="2" lastPageNumber="188" masterDocId="FFDDC92DD545FFD3CF333E682907FFC2" masterDocTitle="Obliquicauda longipens sp. nov. and Obliquicauda xianninga sp. nov.: two new species of foliicolous algae from China" masterLastPageNumber="190" masterPageNumber="181" pageNumber="186" updateTime="1700733901421" updateUser="ExternalLinkService" zenodo-license-figures="UNSPECIFIED" zenodo-license-treatments="UNSPECIFIED">
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<mods:title id="883D0BD172C3C5DE8F10A54E833CA6D1">Obliquicauda longipens sp. nov. and Obliquicauda xianninga sp. nov.: two new species of foliicolous algae from China</mods:title>
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<mods:namePart id="64A21F9755B559338797F3C3BBD23E4F">Li, Shu-Yin</mods:namePart>
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<mods:affiliation id="BF75CAEB0ABB4F583846B4703D5121BE">Yangtze River Basin Ecological Environment Monitoring and Scientific Research Center, Yangtze River Basin Ecological Environment Supervision and Administration Bureau, Ministry of Ecological Environment, Wuhan 430010, China & Department of Transdisciplinary Science and Engineering, Tokyo Institute of Technology, Tokyo 152 - 8550, Japan & 18202744580 @ 139. com; https: // orcid. org / 0000 - 0002 - 4121 - 5038</mods:affiliation>
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<mods:namePart id="64B985CD453B4BBF2EF495FC944C20EF">Xu, Yuan-Zhao</mods:namePart>
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<mods:nameIdentifier id="5BE392BB135EC5A6ED359EE2A7D6601C" type="ORCID">0009-0003-5398-6803</mods:nameIdentifier>
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<mods:affiliation id="7D5D0DE4F0912F28A30F5252CDBA6FFE">Yangtze River Basin Ecological Environment Monitoring and Scientific Research Center, Yangtze River Basin Ecological Environment Supervision and Administration Bureau, Ministry of Ecological Environment, Wuhan 430010, China & xuyz- 3917 @ 139. com; https: // orcid. org / 0009 - 0003 - 5398 - 6803</mods:affiliation>
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<mods:namePart id="B632078E75DAD0C6B9D664F3407EF636">Guo, Wen-Si</mods:namePart>
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<mods:affiliation id="718083A0706A8DD636704D775A90C8A0">Yangtze River Basin Ecological Environment Monitoring and Scientific Research Center, Yangtze River Basin Ecological Environment Supervision and Administration Bureau, Ministry of Ecological Environment, Wuhan 430010, China & guowensi @ cjjg. mee. gov. cn; https: // orcid. org / 0009 - 0000 - 4870 - 1074</mods:affiliation>
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<mods:namePart id="8B1481B92E54258E8F2C7649B4B2AAB1">Zhu, Huan</mods:namePart>
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<mods:affiliation id="14BD955A74D2F4B24439842BBA0A9D5F">Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China & huanzhu @ ihb. ac. cn; https: // orcid. org / 0000 - 0002 - 8531 - 2067</mods:affiliation>
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<mods:nameIdentifier id="DA8CDAF4B20FBE3BD1FA3F30ABD6A89B" type="email">huanzhu@ihb.ac.cn</mods:nameIdentifier>
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<mods:title id="CB5CDC89114E44E6BEE9506E7E5F64B7">Phytotaxa</mods:title>
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<mods:date id="987ECD079D87EDBF3A6310955B22B07A">2023</mods:date>
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<mods:number id="0B61DD53A9B29729A9012A493D452F8A">626</mods:number>
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<subSubSection id="C35753C8D540FFD6CFBB38A62A6CF92A" box="[136,875,1742,1769]" pageId="5" pageNumber="186" type="nomenclature">
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<paragraph id="8BF20043D540FFD6CFBB38A62A6CF92A" blockId="5.[136,875,1742,1769]" box="[136,875,1742,1769]" pageId="5" pageNumber="186">
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<heading id="D0BAB72FD540FFD6CFBB38A62A6CF92A" bold="true" box="[136,875,1742,1769]" fontSize="11" level="1" pageId="5" pageNumber="186" reason="1">
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<emphasis id="B939DC51D540FFD6CFBB38A62A6CF92A" bold="true" box="[136,875,1742,1769]" pageId="5" pageNumber="186">
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<taxonomicName id="4C4D7BC0D540FFD6CFBB38A62B7DF92A" authority="S.Y.Li & G.X.Liu" authorityName="S. Y. Li & G. X. Liu" authorityYear="2023" box="[136,634,1742,1769]" class="Trebouxiophyceae" family="Botryococcaceae" genus="Obliquicauda" higherTaxonomySource="GBIF" kingdom="Plantae" order="Trebouxiales" pageId="5" pageNumber="186" phylum="Chlorophyta" rank="species" species="xianninga" status="sp. nov.">
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<emphasis id="B939DC51D540FFD6CFBB38A628A5F92B" bold="true" box="[136,418,1742,1769]" italics="true" pageId="5" pageNumber="186">Obliquicauda xianninga</emphasis>
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S.Y.Li & G.X.Liu
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</taxonomicName>
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<emphasis id="B939DC51D540FFD6CDB238A72BDFF92B" bold="true" box="[641,728,1743,1769]" italics="true" pageId="5" pageNumber="186">
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<taxonomicNameLabel id="A20A612AD540FFD6CDB238A72BDFF92B" box="[641,728,1743,1769]" pageId="5" pageNumber="186" rank="species">sp. nov.</taxonomicNameLabel>
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</emphasis>
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<figureCitation id="13761CC6D540FFD6CDEC38A62A6CF92A" box="[735,875,1742,1768]" captionStart="FIGURE 3" captionStartId="4.[136,229,1535,1557]" captionTargetBox="[151,1436,175,1526]" captionTargetId="figure-27@4.[151,1436,175,1526]" captionTargetPageId="4" captionText="FIGURE 3. Light photomicrographs of O. xianninga S.Y.Li & G.X. Liu sp.nov.strain FACHB-2471.A: Cultured colony in the laboratory. B–F: Details of cells from young to mature. G–J: Details of autospores and released spores. Scale bars: 10 μm." figureDoi="http://doi.org/10.5281/zenodo.10200331" httpUri="https://zenodo.org/record/10200331/files/figure.png" pageId="5" pageNumber="186">Figs. 3A–3J</figureCitation>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C35753C8D540FFD4CFBB39782DACFC77" lastPageId="7" lastPageNumber="188" pageId="5" pageNumber="186" type="description">
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<paragraph id="8BF20043D540FFD6CFBB39782C4CF7E4" blockId="5.[136,1452,1808,2087]" pageId="5" pageNumber="186">
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<emphasis id="B939DC51D540FFD6CFBB3978281BF8E8" bold="true" box="[136,284,1808,1834]" pageId="5" pageNumber="186">Description:</emphasis>
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—Foliicolous, vegetative cells solitary, fusiform, slightly asymmetrical, without stalk or with a hardly found short stalk. Young cells narrow and elongated, 10.2–13.7 μm long and 3.6–4.0 μm wide, L:W ratio 3.3–3.7. Chloroplasts single, parietal, plate- or saucer-shaped and an inconspicuous pyrenoid. Mature cells much broader, 11.6– 15.9 μm long and 3.6–8.0 μm wide, L:W ratio 1.6–3.4. Most cells have no stalks, and several cells have short stalks of less than 2 μm. Chloroplasts single, parietal, saucer-shaped, with slightly waved margins and a pyrenoid surrounded by starch grains. Multiple chloroplasts transitorily exist during development of autospores due to chloroplast fission before spore cell wall formation. Asexual reproduction by release of 2 or 4 autospores after splitting of the mother cell wall. Sexual reproduction not observed. Representative DNA-sequences: 18S, OR492007;
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<emphasis id="B939DC51D540FFD6CBB736642DAEF7E4" box="[1156,1193,2060,2086]" italics="true" pageId="5" pageNumber="186">rbc</emphasis>
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L, OR493441.
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</paragraph>
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<caption id="DF3250CBD543FFD5CFBB3AF72B08FB3F" ID-DOI="http://doi.org/10.5281/zenodo.10200333" ID-Zenodo-Dep="10200333" httpUri="https://zenodo.org/record/10200333/files/figure.png" pageId="6" pageNumber="187" startId="6.[136,229,1183,1205]" targetBox="[220,1362,186,1144]" targetPageId="6" targetType="figure">
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<paragraph id="8BF20043D543FFD5CFBB3AF72B08FB3F" blockId="6.[136,1452,1183,1278]" pageId="6" pageNumber="187">
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<emphasis id="B939DC51D543FFD5CFBB3AF729F8FB76" bold="true" box="[136,255,1183,1205]" pageId="6" pageNumber="187">FIGURE 4.</emphasis>
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Comparison of the cell morphology of the four species in
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<emphasis id="B939DC51D543FFD5CC0D3AC82ACEFB77" box="[830,969,1184,1205]" italics="true" pageId="6" pageNumber="187">
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<taxonomicName id="4C4D7BC0D543FFD5CC0D3AC82AC2FB77" authorityName="S. Y. Li & G. X. Liu" authorityYear="2020" box="[830,965,1184,1205]" class="Trebouxiophyceae" family="Botryococcaceae" genus="Obliquicauda" higherTaxonomySource="GBIF" kingdom="Plantae" order="Trebouxiales" pageId="6" pageNumber="187" phylum="Chlorophyta" rank="genus">Obliquicauda</taxonomicName>
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.
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</emphasis>
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A: Comparison of cell width (X-axis) and length (Y-axis), achieved by the R package
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<emphasis id="B939DC51D543FFD5CED83AAC2B33FB1B" box="[491,564,1220,1241]" italics="true" pageId="6" pageNumber="187">ggplot2</emphasis>
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with Linear Model. B: Comparison of stalk length, achieved by the R packages
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<emphasis id="B939DC51D543FFD5CA0E3AAC2C85FB1B" box="[1341,1410,1220,1241]" italics="true" pageId="6" pageNumber="187">ggpubr</emphasis>
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and
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<emphasis id="B939DC51D543FFD5CFBB3A8029D6FB3F" box="[136,209,1256,1277]" italics="true" pageId="6" pageNumber="187">ggplot2</emphasis>
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with “anova” method and T test.
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</paragraph>
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</caption>
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<caption id="DF3250CBD543FFD5CFBB39A32884F7EB" ID-DOI="http://doi.org/10.5281/zenodo.10200335" ID-Zenodo-Dep="10200335" httpUri="https://zenodo.org/record/10200335/files/figure.png" pageId="6" pageNumber="187" startId="6.[136,229,1995,2017]" targetBox="[295,1303,1313,1952]" targetPageId="6" targetType="figure">
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<paragraph id="8BF20043D543FFD5CFBB39A32884F7EB" blockId="6.[136,1451,1995,2089]" pageId="6" pageNumber="187">
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<emphasis id="B939DC51D543FFD5CFBB39A329FAF822" bold="true" box="[136,253,1995,2017]" pageId="6" pageNumber="187">FIGURE 5.</emphasis>
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Phylogenetic tree of
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<taxonomicName id="4C4D7BC0D543FFD5CEFA39A32B7CF823" box="[457,635,1995,2017]" class="Trebouxiophyceae" higherTaxonomySource="GBIF" kingdom="Plantae" pageId="6" pageNumber="187" phylum="Chlorophyta" rank="class">Trebouxiophyceae</taxonomicName>
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based on 18S rDNA sequences. Bootstrap support from Bayesian inference posterior probabilities and maximum likelihood are presented on the nodes (Values of key nodes are shown in red bold). Values above 0.50 for BI and 50 for ML are shown.
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</paragraph>
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</caption>
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<caption id="DF3250CBD542FFD4CFBB3C822B35FC8B" ID-DOI="http://doi.org/10.5281/zenodo.10200337" ID-Zenodo-Dep="10200337" httpUri="https://zenodo.org/record/10200337/files/figure.png" pageId="7" pageNumber="188" startId="7.[136,229,746,768]" targetBox="[169,1415,219,703]" targetPageId="7" targetType="figure">
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<paragraph id="8BF20043D542FFD4CFBB3C822B35FC8B" blockId="7.[136,1451,746,841]" pageId="7" pageNumber="188">
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<emphasis id="B939DC51D542FFD4CFBB3C8229F8FD3D" bold="true" box="[136,255,746,768]" pageId="7" pageNumber="188">FIGURE 6.</emphasis>
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Phylogenetic tree of the
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<emphasis id="B939DC51D542FFD4CECB3C832BE8FCC2" box="[504,751,747,768]" italics="true" pageId="7" pageNumber="188">
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<taxonomicName id="4C4D7BC0D542FFD4CECB3C832B65FCC2" authorityName="B. Fott" authorityYear="1976" baseAuthorityName="H. Skuja" box="[504,610,747,768]" class="Chlorophyceae" family="Coccomyxaceae" genus="Choricystis" kingdom="Plantae" order="Chlamydomonadales" pageId="7" pageNumber="188" phylum="Chlorophyta" rank="genus">Choricystis</taxonomicName>
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/Botryococcus
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</emphasis>
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clade based on
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<emphasis id="B939DC51D542FFD4CCBC3C832AA8FCC2" box="[911,943,747,768]" italics="true" pageId="7" pageNumber="188">rbc</emphasis>
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L gene sequences. Bootstrap support from Bayesian inference posterior probabilities and maximum likelihood are presented on the nodes (Values of key nodes are shown in red bold). Values above 0.50 for BI and 50 for ML are shown.
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</paragraph>
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</caption>
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<paragraph id="8BF20043D542FFD4CF8E3D1F2DACFC77" blockId="7.[136,1451,887,1129]" pageId="7" pageNumber="188">
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||
<emphasis id="B939DC51D542FFD4CF8E3D1F2897FC53" bold="true" box="[189,400,887,913]" pageId="7" pageNumber="188">Reference strain:</emphasis>
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—A living culture was deposited in the Freshwater Algae Culture Collection, Institute of Hydrobiology, Chinese Academy of Science, Wuhan,
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<collectingCountry id="F35A40D3D542FFD4CDD73DF32A20FC77" box="[740,807,923,949]" name="China" pageId="7" pageNumber="188">China</collectingCountry>
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(FACHB) as strain FACHB-2471.
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</paragraph>
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||
</subSubSection>
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||
<subSubSection id="C35753C8D542FFD4CF8E3DD728F7FB87" pageId="7" pageNumber="188" type="materials_examined">
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<paragraph id="8BF20043D542FFD4CF8E3DD72D6AFC3F" blockId="7.[136,1451,887,1129]" pageId="7" pageNumber="188">
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<materialsCitation id="3B250A1ED542FFD4CF8E3DD72D6AFC3F" collectionCode="HBI" country="China" county="Wuhan" location="Freshwater Algal Herbarium" municipality="Chinese Academy of Science" pageId="7" pageNumber="188" specimenCode="G179" specimenCount="1" stateProvince="Hubei" typeStatus="holotype">
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<emphasis id="B939DC51D542FFD4CF8E3DD72833FC1B" bold="true" box="[189,308,959,985]" pageId="7" pageNumber="188">
|
||
<typeStatus id="54F6BEE1D542FFD4CF8E3DD72829FC1B" box="[189,302,959,985]" pageId="7" pageNumber="188" type="holotype">Holotype</typeStatus>
|
||
:
|
||
</emphasis>
|
||
—Deposited as
|
||
<specimenCode id="DBEBA838D542FFD4CEDC3DD72B2BFC1B" box="[495,556,959,985]" collectionCode="G" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" pageId="7" pageNumber="188" type="Herbarium">G179</specimenCode>
|
||
(formaldehyde-fixed algal fluids) in the
|
||
<location id="8E925698D542FFD4CB3D3DD72C51FC1B" LSID="urn:lsid:plazi:treatment:03E4B155D540FFD4CFBB38A62DC3FBAB:8E925698D542FFD4CB3D3DD72C51FC1B" box="[1038,1366,959,985]" country="China" county="Wuhan" municipality="Chinese Academy of Science" name="Freshwater Algal Herbarium" pageId="7" pageNumber="188" stateProvince="Hubei">Freshwater Algal Herbarium</location>
|
||
(
|
||
<collectionCode id="ED5C9886D542FFD4CA593DD72C98FC1B" box="[1386,1439,959,985]" country="China" httpUri="http://biocol.org/urn:lsid:biocol.org:col:13303" lsid="urn:lsid:biocol.org:col:13303" name="Institute of Hydrobiology, Chinese Academy of Sciences" pageId="7" pageNumber="188" type="Herbarium">HBI</collectionCode>
|
||
),
|
||
<location id="8E925698D542FFD4CFBB3D8B28A0FC3F" LSID="urn:lsid:plazi:treatment:03E4B155D540FFD4CFBB38A62DC3FBAB:8E925698D542FFD4CFBB3D8B28A0FC3F" box="[136,423,995,1021]" country="China" county="Wuhan" municipality="Chinese Academy of Science" name="Institute of Hydrobiology" pageId="7" pageNumber="188" stateProvince="Hubei">Institute of Hydrobiology</location>
|
||
,
|
||
<collectingMunicipality id="6B969A39D542FFD4CE813D8B2BFAFC3F" box="[434,765,995,1021]" pageId="7" pageNumber="188">Chinese Academy of Science</collectingMunicipality>
|
||
,
|
||
<collectingCounty id="629378CFD542FFD4CC343D8B2A5DFC3F" box="[775,858,995,1021]" pageId="7" pageNumber="188">Wuhan</collectingCounty>
|
||
,
|
||
<collectingRegion id="4989CEA1D542FFD4CC563D8B2D11FC3F" box="[869,1046,995,1021]" country="China" name="Hubei" pageId="7" pageNumber="188">Hubei Province</collectingRegion>
|
||
,
|
||
<collectingCountry id="F35A40D3D542FFD4CB113D8B2D6EFC3F" box="[1058,1129,995,1021]" name="China" pageId="7" pageNumber="188">China</collectingCountry>
|
||
.
|
||
</materialsCitation>
|
||
</paragraph>
|
||
<paragraph id="8BF20043D542FFD4CF8E3A6F28F7FB87" blockId="7.[136,1451,887,1129]" pageId="7" pageNumber="188">
|
||
<emphasis id="B939DC51D542FFD4CF8E3A6F2858FBE3" bold="true" box="[189,351,1031,1057]" pageId="7" pageNumber="188">Type locality:</emphasis>
|
||
—
|
||
<materialsCitation id="3B250A1ED542FFD4CE4F3A6F28EBFB87" collectingDate="2019-04" country="China" latitude="29.411066" location="Hubei Province" longLatPrecision="1" longitude="114.589836" pageId="7" pageNumber="188" specimenCount="1" stateProvince="Hubei">
|
||
Xianning city (
|
||
<geoCoordinate id="EE796684D542FFD4CD103A6F2BCAFBE3" box="[547,717,1031,1057]" degrees="29" direction="north" minutes="24" orientation="latitude" pageId="7" pageNumber="188" precision="1" seconds="39.84" value="29.411066">29°24'39.84"N</geoCoordinate>
|
||
,
|
||
<geoCoordinate id="EE796684D542FFD4CDEA3A6F2A8AFBE0" box="[729,909,1031,1058]" degrees="114" direction="east" minutes="35" orientation="longitude" pageId="7" pageNumber="188" precision="1" seconds="23.41" value="114.589836">114°35'23.41"E</geoCoordinate>
|
||
),
|
||
<collectingRegion id="4989CEA1D542FFD4CC933A6F2D56FBE3" box="[928,1105,1031,1057]" country="China" name="Hubei" pageId="7" pageNumber="188">Hubei Province</collectingRegion>
|
||
,
|
||
<collectingCountry id="F35A40D3D542FFD4CB6E3A6F2DA4FBE3" box="[1117,1187,1031,1057]" name="China" pageId="7" pageNumber="188">China</collectingCountry>
|
||
; collected from a living
|
||
<taxonomicName id="4C4D7BC0D542FFD4CFBB3A44281CFB87" box="[136,283,1067,1093]" class="Magnoliopsida" family="Moraceae" genus="Ficus" kingdom="Plantae" order="Rosales" pageId="7" pageNumber="188" phylum="Tracheophyta" rank="species" species="pumila">
|
||
<emphasis id="B939DC51D542FFD4CFBB3A44281CFB87" box="[136,283,1067,1093]" italics="true" pageId="7" pageNumber="188">Ficus pumila</emphasis>
|
||
</taxonomicName>
|
||
leaf in
|
||
<date id="FFF32683D542FFD4CE5D3A4328EBFB87" box="[366,492,1067,1093]" pageId="7" pageNumber="188" value="2019-04">
|
||
<collectingDate id="EFB7DF6BD542FFD4CE5D3A4328EBFB87" box="[366,492,1067,1093]" pageId="7" pageNumber="188" value="2019-04">April 2019</collectingDate>
|
||
</date>
|
||
</materialsCitation>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C35753C8D542FFD4CF8E3A272DC3FBAB" box="[189,1220,1103,1129]" pageId="7" pageNumber="188" type="etymology">
|
||
<paragraph id="8BF20043D542FFD4CF8E3A272DC3FBAB" blockId="7.[136,1451,887,1129]" box="[189,1220,1103,1129]" pageId="7" pageNumber="188">
|
||
<emphasis id="B939DC51D542FFD4CF8E3A27284FFBAB" bold="true" box="[189,328,1103,1129]" pageId="7" pageNumber="188">Etymology:</emphasis>
|
||
—The species was named for the geographic origin (Xianning) of the
|
||
<typeStatus id="54F6BEE1D542FFD4CB693A272DC7FBAB" box="[1114,1216,1103,1129]" pageId="7" pageNumber="188" type="holotype">holotype</typeStatus>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |