122 lines
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122 lines
14 KiB
XML
<document id="9D41492CA30617ACE31025B83B7DA2B8" ID-DOI="10.11646/phytotaxa.388.1.2" ID-ISSN="1179-3163" ID-Zenodo-Dep="13725500" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="felipe" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.taxonomicNames_approvedBy="felipe" IM.treatments_approvedBy="felipe" checkinTime="1725673815287" checkinUser="felipe" docAuthor="Darienko, Tatyana & Pröschold, Thomas" docDate="2019" docId="03BBD82074379832FF2DF8B6FC19FD64" docLanguage="en" docName="phytotaxa.388.1.2.pdf" docOrigin="Phytotaxa 388 (1)" docSource="http://dx.doi.org/10.11646/phytotaxa.388.1.2" docStyle="DocumentStyle:96748F8F1B6C902996E134952A3A36B9.13:Phytotaxa.2014-.journal_article" docStyleId="96748F8F1B6C902996E134952A3A36B9" docStyleName="Phytotaxa.2014-.journal_article" docStyleVersion="13" docTitle="Jaagichlorella africana Darienko & Proschold 2019, sp. nov." docType="treatment" docVersion="2" lastPageNumber="64" masterDocId="FF82A05874279823FFA5FFF9FFB7FFD5" masterDocTitle="The genus Jaagichlorella Reisigl (Trebouxiophyceae, Chlorophyta) and its close relatives: an evolutionary puzzle" masterLastPageNumber="68" masterPageNumber="47" pageNumber="63" updateTime="1725685413678" updateUser="ExternalLinkService" zenodo-license-figures="UNSPECIFIED" zenodo-license-treatments="UNSPECIFIED">
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<mods:title id="8FA85A9F60942A4A915BE3BC0A166168">The genus Jaagichlorella Reisigl (Trebouxiophyceae, Chlorophyta) and its close relatives: an evolutionary puzzle</mods:title>
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<mods:name id="E5DB7E3F3F40977576ED7CA5DA4A1524" type="personal">
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<mods:roleTerm id="CAA981AD01BE4DB0089A66CA1535366A">Author</mods:roleTerm>
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<mods:namePart id="2775482BD441657B69E82DA0C658369F">Darienko, Tatyana</mods:namePart>
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<mods:affiliation id="4FF586BBDD14741BD3F64183726C8A6A">University of Göttingen, Albrecht-von-Haller-Institute of Plant Sciences, Experimental Phycology and Sammlung für Algenkulturen, D- 37073 Göttingen, Germany & M. G. Kholodny Institute of Botany, National Academy Science of Ukraine, Kyiv 01601, Ukraine</mods:affiliation>
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<mods:roleTerm id="A48A5076D5558F723DFAECD7097BE18A">Author</mods:roleTerm>
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<mods:namePart id="E5498395734EF4B887BF2D23BBF488ED">Pröschold, Thomas</mods:namePart>
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<mods:affiliation id="6C688628AD5A88E70134E2B9D95F24E9">University of Innsbruck, Research Department for Limnology, A- 5310 Mondsee, Austria</mods:affiliation>
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<mods:title id="388D7EFC2DCDF5334935A17C0B8A77DC">Phytotaxa</mods:title>
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<mods:part id="20673734D9B3AECD8C5882FE152A0AC0">
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<mods:date id="B50413FD4E9EF6A1CFAA6148BC105460">2019</mods:date>
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<mods:number id="1EA9D1B41F80474EB76F008528007C28">2019-01-14</mods:number>
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<mods:number id="1E99C6899AB0F6DA992D0A098ADC4F48">388</mods:number>
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<mods:url id="AF8700E7FB29E5CAA8B8B3E11E411C99">http://dx.doi.org/10.11646/phytotaxa.388.1.2</mods:url>
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<mods:classification id="AEEAAFF35A37D2374508F18F2CF610B1">journal article</mods:classification>
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<mods:identifier id="CF981B8DD019FB82A21D34C801383098" type="DOI">10.11646/phytotaxa.388.1.2</mods:identifier>
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<mods:identifier id="EC06E1F78D3790A7254F2657B9EF836F" type="ISSN">1179-3163</mods:identifier>
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<mods:identifier id="C1B9EFDF4928F0B00028E6CAD9CAA1A4" type="Zenodo-Dep">13725500</mods:identifier>
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<treatment id="03BBD82074379832FF2DF8B6FC19FD64" ID-DOI="http://doi.org/10.5281/zenodo.13725514" ID-Zenodo-Dep="13725514" LSID="urn:lsid:plazi:treatment:03BBD82074379832FF2DF8B6FC19FD64" httpUri="http://treatment.plazi.org/id/03BBD82074379832FF2DF8B6FC19FD64" lastPageId="17" lastPageNumber="64" pageId="16" pageNumber="63">
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<subSubSection id="C3083ABD74379833FF2DF8B6FCCCF8BE" box="[136,891,1871,1899]" pageId="16" pageNumber="63" type="nomenclature">
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<paragraph id="8BAD693674379833FF2DF8B6FCCCF8BE" blockId="16.[136,891,1871,1899]" box="[136,891,1871,1899]" pageId="16" pageNumber="63">
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<heading id="D0E5DE5A74379833FF2DF8B6FCCCF8BE" box="[136,891,1871,1899]" fontSize="11" level="2" pageId="16" pageNumber="63" reason="3">
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<taxonomicName id="4C1212B574379833FF2DF8B6FD2DF8BE" authority="Darienko & Proschold" authorityName="Darienko & Proschold" authorityYear="2019" box="[136,666,1871,1899]" class="Trebouxiophyceae" family="Oocystaceae" genus="Jaagichlorella" kingdom="Plantae" order="Oocystales" pageId="16" pageNumber="63" phylum="Chlorophyta" rank="species" species="africana" status="sp. nov.">
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<emphasis id="B966B52474379833FF2DF8B6FE2FF8BF" bold="true" box="[136,408,1871,1898]" italics="true" pageId="16" pageNumber="63">Jaagichlorella africana</emphasis>
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Darienko & Pröschold
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</taxonomicName>
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<emphasis id="B966B52474379833FD04F8ABFD41F8BE" box="[673,758,1874,1899]" italics="true" pageId="16" pageNumber="63">
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<taxonomicNameLabel id="A255085F74379833FD04F8ABFD41F8BE" box="[673,758,1874,1899]" pageId="16" pageNumber="63" rank="species">sp. nov.</taxonomicNameLabel>
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</emphasis>
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(
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<figureCitation id="132975B374379833FCA0F8ABFCC5F8BE" box="[773,882,1874,1899]" captionStart="FIGURE 4" captionStartId="10.[136,229,1601,1622]" captionTargetBox="[151,1435,221,1494]" captionTargetId="figure-15@10.[151,1436,221,1494]" captionTargetPageId="10" captionText="FIGURE 4. Morphology and phenotypic plasticity of Jaagichlorella luteoviridis (SAG 211-2a; A.–I.) and J. africana (SAG 2213; H.–T.); scale bar = 10 μm." figureDoi="http://doi.org/10.5281/zenodo.13725510" httpUri="https://zenodo.org/record/13725510/files/figure.png" pageId="16" pageNumber="63">Fig. 4J–T</figureCitation>
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)
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C3083ABD74379832FF2DF863FDBAFE28" lastPageId="17" lastPageNumber="64" pageId="16" pageNumber="63" type="description">
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<paragraph id="8BAD693674379832FF2DF863FEE1FEF0" blockId="16.[136,1452,1946,2079]" lastBlockId="17.[136,1452,160,689]" lastPageId="17" lastPageNumber="64" pageId="16" pageNumber="63">
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<emphasis id="B966B52474379833FF2DF863FEABF866" bold="true" box="[136,284,1946,1971]" pageId="16" pageNumber="63">Description:</emphasis>
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Young cells are spherical (5.5–6.4 μm in diameter) or slightly ovoid to irregular (6.4 x 5.5 μm in size). Cell wall by young cells is relative thick. Chloroplast cup-shaped to saucer-shaped, covers 2/3 of the cell with a single, distinct pyrenoid surrounded by several starch grains. Mature vegetative cells are mostly spherical, 7.3–9.1 μm, sometimes 11.8 μm in size. Cell wall is relative thick. Chloroplast deep cup-shaped, often with small incisions or wavy margins, in the bottom part sometimes slightly removed from the cell wall. Chloroplast thick, with dark-green color, which covers 2/3 or more of the cell. The single pyrenoid is distinct surrounded by many starch grains. Numerous, small vacuoles and inclusions are present. Old cells often have a reduced chloroplast, which is only slightly removed from the cell wall.
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</paragraph>
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<paragraph id="8BAD693674369832FF18FEC9FDBAFE28" blockId="17.[136,1452,160,689]" pageId="17" pageNumber="64">
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Reproduction is by 2-4-8 unequal autospores. Autospores have a saucer-shaped or band-shaped chloroplast with a visible pyrenoid. Liberation of spores by rupture of the sporangial cell wall. Remains of the sporangial cell wall are usually bag-shaped. Often one autospore remains in the cell wall and develops to a mature cell or a new sporangium. Autosporangia are spherical or often irregular, 9.1–11.8 μm, sometimes up to 15.5 μm in size. Large autospores between 6.4–11.8 μm, small autospores 3.7–5.4 μm in size. SSU and ITS rDNA sequences (GenBank: MH780938) and ITS-2 Barcode BC-
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<quantity id="4CEAC4D374369832FE36FE1DFE09FE28" box="[403,446,484,509]" metricMagnitude="-2" metricUnit="m" metricValue="5.08" pageId="17" pageNumber="64" unit="in" value="2.0">2 in</quantity>
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<figureCitation id="132975B374369832FE60FE1DFDBFFE28" box="[453,520,484,509]" captionStart="FIGURE 3" captionStartId="9.[136,229,1113,1134]" captionTargetBox="[171,1421,208,1067]" captionTargetId="figure-14@9.[151,1436,187,1085]" captionTargetPageId="9" captionText="FIGURE 3. Comparison of the conserved region of ITS-2 among the species of Jaagichlorella and Kalinella. Extraction of this region and translation into a number code for its usage as barcode. The ‘/’ indicated the position of the site loop in Helix III, which we excluded from the barcode. Number code for each base pair: 1 = A-U; 2 = U-A; 3 = G-C; 4 = C-G; 5 = G•U; 6 = U•G; 7 = pyrimidine-pyrimidine mismatch; 8 = deletion, single or unpaired bases. The phylogenetic tree shown was calculated using the neighbor-joining method based on the data set (69 number-coded positions of 11 haplotypes) using PAUP 4.0b10." figureDoi="http://doi.org/10.5281/zenodo.13725508" httpUri="https://zenodo.org/record/13725508/files/figure.png" pageId="17" pageNumber="64">Fig. 3</figureCitation>
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.
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</paragraph>
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</subSubSection>
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<subSubSection id="C3083ABD74369832FF18FDF1FC40FD58" pageId="17" pageNumber="64" type="materials_examined">
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<paragraph id="8BAD693674369832FF18FDF1FC65FDF4" blockId="17.[136,1452,160,689]" box="[189,978,520,545]" pageId="17" pageNumber="64">
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<emphasis id="B966B52474369832FF18FDF1FEE8FDF4" bold="true" box="[189,351,520,545]" pageId="17" pageNumber="64">Type locality:</emphasis>
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Lithophytic on the surface of a concrete wall,
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<collectingCountry id="F30529A674369832FCCFFDF1FC79FDF4" box="[874,974,520,545]" name="Namibia" pageId="17" pageNumber="64">Namibia</collectingCountry>
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.
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</paragraph>
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<paragraph id="8BAD693674369832FF18FDD5FC11FDBC" blockId="17.[136,1452,160,689]" pageId="17" pageNumber="64">
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<materialsCitation id="3B7A636B74369832FF18FDD5FC11FDBC" collectionCode="SAG" country="Germany" location="Culture Collection of Algae" municipality="University of Gottingen" pageId="17" pageNumber="64" specimenCode="SAG 2213" specimenCount="1" typeStatus="holotype">
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<emphasis id="B966B52474369832FF18FDD5FE9DFD90" bold="true" box="[189,298,556,581]" pageId="17" pageNumber="64">
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<typeStatus id="54A9D79474369832FF18FDD5FE9DFD90" box="[189,298,556,581]" pageId="17" pageNumber="64" type="holotype">Holotype</typeStatus>
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</emphasis>
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(designated here): The authentic strain
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<specimenCode id="DBB4C14D74369832FD4EFDD5FCD5FD90" box="[747,866,556,581]" collectionCode="SAG" country="Germany" httpUri="http://grbio.org/cool/2vvw-hn58" name="Sammlung von Algenkulturen at Universitat Gottingen" pageId="17" pageNumber="64">SAG 2213</specimenCode>
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is cryopreserved in a metabolic inactive state at the
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<location id="8ECD3FED74369832FF2DFDA9FE08FDBC" LSID="urn:lsid:plazi:treatment:03BBD82074379832FF2DF8B6FC19FD64:8ECD3FED74369832FF2DFDA9FE08FDBC" box="[136,447,592,617]" country="Germany" municipality="University of Gottingen" name="Culture Collection of Algae" pageId="17" pageNumber="64">Culture Collection of Algae</location>
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(
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<collectionCode id="ED03F1F374369832FE68FDA9FDBDFDBC" box="[461,522,592,617]" country="Germany" httpUri="http://grbio.org/cool/2vvw-hn58" name="Sammlung von Algenkulturen at Universitat Gottingen" pageId="17" pageNumber="64">SAG</collectionCode>
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),
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<collectingMunicipality id="6BC9F34C74369832FDBBFDA9FC9AFDBC" box="[542,813,592,617]" pageId="17" pageNumber="64">University of Göttingen</collectingMunicipality>
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,
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<collectingCountry id="F30529A674369832FC9DFDA9FC15FDBC" box="[824,930,592,617]" name="Germany" pageId="17" pageNumber="64">Germany</collectingCountry>
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.
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</materialsCitation>
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</paragraph>
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<paragraph id="8BAD693674369832FF18FD8DFC40FD58" blockId="17.[136,1452,160,689]" box="[189,1015,628,653]" pageId="17" pageNumber="64">
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<emphasis id="B966B52474369832FF18FD8DFE84FD58" bold="true" box="[189,307,628,653]" pageId="17" pageNumber="64">
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<typeStatus id="54A9D79474369832FF18FD8DFE84FD58" box="[189,307,628,653]" pageId="17" pageNumber="64" type="iconotype">Iconotype</typeStatus>
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</emphasis>
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(designated here to support the
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<typeStatus id="54A9D79474369832FD3EFD8DFCB4FD58" box="[667,771,628,653]" pageId="17" pageNumber="64" type="holotype">holotype</typeStatus>
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):
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<figureCitation id="132975B374369832FCB0FD8DFCD6FD58" box="[789,865,628,653]" captionStart="FIGURE 4" captionStartId="10.[136,229,1601,1622]" captionTargetBox="[151,1435,221,1494]" captionTargetId="figure-15@10.[151,1436,221,1494]" captionTargetPageId="10" captionText="FIGURE 4. Morphology and phenotypic plasticity of Jaagichlorella luteoviridis (SAG 211-2a; A.–I.) and J. africana (SAG 2213; H.–T.); scale bar = 10 μm." figureDoi="http://doi.org/10.5281/zenodo.13725510" httpUri="https://zenodo.org/record/13725510/files/figure.png" pageId="17" pageNumber="64">Fig. 4J</figureCitation>
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in this study.
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</paragraph>
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</subSubSection>
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<subSubSection id="C3083ABD74369832FF18FD61FC19FD64" box="[189,942,664,689]" pageId="17" pageNumber="64" type="etymology">
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<paragraph id="8BAD693674369832FF18FD61FC19FD64" blockId="17.[136,1452,160,689]" box="[189,942,664,689]" pageId="17" pageNumber="64">
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<emphasis id="B966B52474369832FF18FD61FE89FD64" bold="true" box="[189,318,664,689]" pageId="17" pageNumber="64">Etymology</emphasis>
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: The species epithet indicates the origin of this species.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |