165 lines
16 KiB
XML
165 lines
16 KiB
XML
<document id="DBD6BF3A99A9B48B255414076A890A46" ID-CLB-Dataset="20675" ID-DOI="10.1099/ijsem.0.003121" ID-GBIF-Dataset="ce8b8745-205c-4fdb-9f48-11de4033940f" ID-ISSN="1466-5034" ID-Zenodo-Dep="6048610" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1644596871754" checkinUser="felipe" docAuthor="Kim, Jong-Hwa, Kanjanasuntree, Rungravee, Kim, Dae-Hoon, Lee, Jung-Sook, Sukhoom, Ampaitip, Kantachote, Duangporn & Kim, Wonyong" docDate="2019" docId="A3324055590BFFF6FFADFB1DFB8AFD28" docLanguage="en" docName="IntJSystEvolMicrobiol.69.1.153-158.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 69 (1)" docSource="http://dx.doi.org/10.1099/ijsem.0.003121" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Arenibacillus arenosus Kim & Kanjanasuntree & Kim & Lee & Sukhoom & Kantachote & Kim 2019, SP. NOV." docType="treatment" docVersion="8" lastPageNumber="157" masterDocId="5F0B382D590FFFF2FFD4FFA1FFEEFFEF" masterDocTitle="Arenibacillus arenosus gen. nov., sp. nov., a member of the family Rhodobacteraceae isolated from sea sand" masterLastPageNumber="158" masterPageNumber="153" pageNumber="157" updateTime="1699310145150" updateUser="ExternalLinkService">
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<mods:title id="5AF60B3CD7987992DDFE3367DCC23D87">Arenibacillus arenosus gen. nov., sp. nov., a member of the family Rhodobacteraceae isolated from sea sand</mods:title>
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<mods:namePart id="F36F6EB55899B94E2C5DD271DF656D7F">Kim, Jong-Hwa</mods:namePart>
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<mods:namePart id="57ADD1C7F647033383CBADD0D4391998">Kanjanasuntree, Rungravee</mods:namePart>
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<mods:namePart id="29A06CF45EA0FA77D262A342A61083D2">Kim, Dae-Hoon</mods:namePart>
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<mods:namePart id="7FBA36F0B5D5E87D1427E31075C1BFCE">Lee, Jung-Sook</mods:namePart>
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<mods:roleTerm id="D3F43063FA06FDC4DA54D0BC86CDF764">Author</mods:roleTerm>
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<mods:namePart id="12F347848920CC391F256689A8150EDC">Sukhoom, Ampaitip</mods:namePart>
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<mods:namePart id="95CEAF609294669F28942B7ED4B90900">Kantachote, Duangporn</mods:namePart>
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<mods:namePart id="B45644FCCDEEC40D82F5B4B5163312FE">Kim, Wonyong</mods:namePart>
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<mods:title id="3D25E66D5E69C2B2153C4F6E3AD2A163">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:part id="5C61D5D8A93DC38856CE71F768A9A9E6">
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<mods:date id="EF8F977A7EE52E7E80B438B2878EAD09">2019</mods:date>
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<mods:number id="F360B03EC58E15FA0AE99DD156A0C894">2019-01-01</mods:number>
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<mods:identifier id="593CB50F4439CD3E361B4E6AFC19D47B" type="CLB-Dataset">20675</mods:identifier>
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<mods:identifier id="D0A21277F4338025A6BBF698E85538F5" type="DOI">10.1099/ijsem.0.003121</mods:identifier>
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<mods:identifier id="60AA69F108E03A975F93D04323EB1DEF" type="GBIF-Dataset">ce8b8745-205c-4fdb-9f48-11de4033940f</mods:identifier>
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<mods:identifier id="643B87903468108FF15E25AE95DCDD62" type="ISSN">1466-5034</mods:identifier>
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<treatment id="A3324055590BFFF6FFADFB1DFB8AFD28" ID-DOI="http://doi.org/10.5281/zenodo.6309511" ID-GBIF-Taxon="193365112" ID-Zenodo-Dep="6309511" LSID="urn:lsid:plazi:treatment:A3324055590BFFF6FFADFB1DFB8AFD28" httpUri="http://treatment.plazi.org/id/A3324055590BFFF6FFADFB1DFB8AFD28" lastPageNumber="157" pageId="4" pageNumber="157">
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<subSubSection id="6381A2C8590BFFF6FFADFB1DFF1AFB11" pageId="4" pageNumber="157" type="nomenclature">
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<heading id="706C462F590BFFF6FFADFB1DFF1AFB11" allCaps="true" bold="true" centered="true" fontSize="12" level="2" pageId="4" pageNumber="157" reason="3">
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<emphasis id="19EF2D51590BFFF6FFADFB1DFF1AFB11" bold="true" pageId="4" pageNumber="157">
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DESCRIPTION OF
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<taxonomicName id="EC9B8AC0590BFFF6FEBAFB1DFD07FB36" authority="Kim & Kanjanasuntree & Kim & Lee & Sukhoom & Kantachote & Kim, 2019" authorityName="Kim & Kanjanasuntree & Kim & Lee & Sukhoom & Kantachote & Kim" authorityYear="2019" box="[366,745,1212,1241]" class="Alphaproteobacteria" family="Rhodobacteraceae" genus="Arenibacillus" kingdom="Bacteria" order="Rhodobacterales" pageId="4" pageNumber="153" phylum="Proteobacteria" rank="species" species="arenosus" status="gen. nov., sp. nov.">
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<emphasis id="19EF2D51590BFFF6FEBAFB1DFD07FB36" bold="true" box="[366,745,1212,1241]" italics="true" pageId="4" pageNumber="157">ARENIBACILLUS ARENOSUS</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="02DC902A590BFFF6FFADFB40FF1AFB11" box="[121,244,1249,1278]" pageId="4" pageNumber="157" rank="species">SP. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="6381A2C8590BFFF6FFADFAACFD4FFAAB" pageId="4" pageNumber="157" type="etymology">
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<paragraph id="2B24F143590BFFF6FFADFAACFD4FFAAB" blockId="4.[121,759,1212,1949]" pageId="4" pageNumber="157">
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<taxonomicName id="EC9B8AC0590BFFF6FFADFAACFE85FACA" authority="Kim & Kanjanasuntree & Kim & Lee & Sukhoom & Kantachote & Kim, 2019" authorityName="Kim & Kanjanasuntree & Kim & Lee & Sukhoom & Kantachote & Kim" authorityYear="2019" box="[121,363,1293,1317]" class="Alphaproteobacteria" family="Rhodobacteraceae" genus="Arenibacillus" kingdom="Bacteria" order="Rhodobacterales" pageId="4" pageNumber="157" phylum="Proteobacteria" rank="species" species="arenosus" status="sp. nov.">
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<emphasis id="19EF2D51590BFFF6FFADFAACFE85FACA" box="[121,363,1293,1317]" italics="true" pageId="4" pageNumber="157">Arenibacillus arenosus</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="02DC902A590BFFF6FEACFAAFFE3EFACA" box="[376,464,1294,1317]" pageId="4" pageNumber="157" rank="species">sp. nov.</taxonomicNameLabel>
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(a.re.no′ sus. L. masc. adj.
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<taxonomicName id="EC9B8AC0590BFFF6FFADFA8CFF3BFAAB" authorityName="Kim & Kanjanasuntree & Kim & Lee & Sukhoom & Kantachote & Kim" authorityYear="2019" box="[121,213,1325,1348]" class="Alphaproteobacteria" family="Rhodobacteraceae" genus="Arenibacillus" kingdom="Bacteria" order="Rhodobacterales" pageId="4" pageNumber="157" phylum="Proteobacteria" rank="species" species="arenosus">
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<emphasis id="19EF2D51590BFFF6FFADFA8CFF3BFAAB" box="[121,213,1325,1348]" italics="true" pageId="4" pageNumber="157">arenosus</emphasis>
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sandy, dwelling in marine sediment, sand).
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</paragraph>
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<subSubSection id="6381A2C8590BFFF6FFADFAFBFB8AFD28" pageId="4" pageNumber="157" type="description">
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Cells are rod-shaped, 0.1–0.9×2.6–3.4 µm, Gram-stain-negative, non-motile and non-spore-forming. Colonies on MA are cream-coloured, circular, smooth, convex and
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<quantity id="EC635CA6590BFFF6FD1EFA39FF29FA21" metricMagnitude="-4" metricUnit="m" metricValue="1.5" metricValueMax="2.0" metricValueMin="1.0" pageId="4" pageNumber="157" unit="mm" value="0.15" valueMax="0.2" valueMin="0.1">0.1– 0.2 mm</quantity>
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in diameter after 3 days of incubation at 30
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C. Growth occurs at 20–37
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<superScript id="DCEE5C0B590BFFF6FE56FA72FE67FA31" attach="right" box="[386,393,1491,1502]" fontSize="6" pageId="4" pageNumber="157">Ǫ</superScript>
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C, but not at 4
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<superScript id="DCEE5C0B590BFFF6FDE5FA72FDD6FA31" attach="right" box="[561,568,1491,1502]" fontSize="6" pageId="4" pageNumber="157">Ǫ</superScript>
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C or above 40
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<superScript id="DCEE5C0B590BFFF6FD03FA72FD30FA31" attach="right" box="[727,734,1491,1502]" fontSize="6" pageId="4" pageNumber="157">Ǫ</superScript>
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C; optimum growth is at 30
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<superScript id="DCEE5C0B590BFFF6FE53FA53FE60FA12" attach="right" box="[391,398,1522,1533]" fontSize="6" pageId="4" pageNumber="157">Ǫ</superScript>
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C. Growth occurs at pH 6.5–10.0, but not at pH 6.0 or pH 10.5; optimum growth is at pH 8.5. Growth occurs in the presence of 0–4 % (w/v) NaCl with optimum growth at 1 % (w/v) NaCl, but not at above 5 % (w/v) NaCl. Negative results in tests for slime production, intracytoplasmic membrane system and growth under photoautotrophic and photoheterotrophic conditions. Bchl
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<emphasis id="19EF2D51590BFFF6FFADF96CFF68F90B" box="[121,134,1741,1764]" italics="true" pageId="4" pageNumber="157">a</emphasis>
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is not present. Indole production is negative and Voges– Proskauer reaction is positive. Reduces nitrate to nitrite. Aesculin is hydrolysed but starch, casein and gelatin are not. Citrate is not utilized. The following substrates are utilized as sole carbon sources: D- mannose, D- mannitol, L- arabinose,
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<subScript id="B71FF306590BFFF6FFADF8CDFF60F891" attach="none" box="[121,142,1894,1918]" fontSize="7" pageId="4" pageNumber="157">D-</subScript>
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ribose and
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<subScript id="B71FF306590BFFF6FEDCF8CDFEF0F891" attach="right" box="[264,286,1894,1918]" fontSize="7" pageId="4" pageNumber="157">D-</subScript>
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xylose. The following substrates are not utilized as sole carbon sources: D- arabinose, D- adonitol, D-galactose, D- glucose, D- fructose, D- fucose, D- mannose, L-sorbose, L- rhamnose, D- sorbitol, melibiose, cellobiose, maltose, lactose, D- arabitol, potassium 2-ketogluconate and potassium 5-ketogluconate. In the API ZYM system, alkaline phosphatase, esterase (C4), esterase lipase (C8), leucine arylamidase, valine arylamidase, naphthol-AS-BI-phosphohydrolase, a- glucosidase and b- glucosidase show positive results, but cystine arylamidase, trypsin, a- chymotrypsin and acid phosphatase are negative. The respiratory quinone is Q-10. The polar lipid pattern consists of phosphatidylglycerol, phosphatidylcholine and an unidentified aminolipid. The predominant cellular fatty acid (>10 % of the total) is C
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<emphasis id="19EF2D51590BFFF6FCA0FD8AFC6AFDD2" box="[884,900,555,573]" italics="true" pageId="4" pageNumber="157">Ɯ</emphasis>
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7
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<emphasis id="19EF2D51590BFFF6FC45FD87FC75FDD2" box="[913,923,550,573]" italics="true" pageId="4" pageNumber="157">c</emphasis>
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.
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</paragraph>
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<materialsCitation id="9BF3FB1E590BFFF6FCEFFDF2FB8FFD28" ID-GBIF-Occurrence="3465774301" collectionCode="T" country="South Korea" location="Eurwangri" municipality="The" pageId="4" pageNumber="157" specimenCode="CAU 1304, KCTC 42827, NBRC 113022" specimenCount="2" typeStatus="holotype">
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The
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<typeStatus id="F4204FE1590BFFF6FCA7FDF5FC4EFD83" box="[883,928,596,620]" pageId="4" pageNumber="157">type</typeStatus>
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strain is
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<specimenCode id="7B3D5938590BFFF6FBCDFDF5FB7CFD83" box="[1049,1170,596,620]" collectionCode="CAU" country="China" httpUri="http://biocol.org/urn:lsid:biocol.org:col:33074" lsid="urn:lsid:biocol.org:col:33074" name="China Agricultural University" pageId="4" pageNumber="157">CAU 1304</specimenCode>
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<collectionCode id="4D8A6986590BFFF6FB46FDECFB70FDB1" box="[1170,1182,589,606]" name="Tavera, Department of Geology and Geophysics" pageId="4" pageNumber="157">T</collectionCode>
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(=
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<specimenCode id="7B3D5938590BFFF6FB16FDF5FAB7FD83" box="[1218,1369,596,620]" collectionCode="KCTC" country="South Korea" httpUri="http://grbio.org/cool/2inw-p49s" name="Korean Collection for Type Cultures" pageId="4" pageNumber="157">KCTC 42827</specimenCode>
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<collectionCode id="4D8A6986590BFFF6FA8CFDECFA8AFDB1" box="[1368,1380,589,606]" name="Tavera, Department of Geology and Geophysics" pageId="4" pageNumber="157">T</collectionCode>
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=
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<specimenCode id="7B3D5938590BFFF6FAA6FDF5FC69FD65" collectionCode="NBRC" country="Japan" httpUri="http://grbio.org/cool/sq2m-rc8c" name="NITE Biological Resource Center" pageId="4" pageNumber="157">NBRC 113022</specimenCode>
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<collectionCode id="4D8A6986590BFFF6FC53FDCDFC7DFD92" box="[903,915,620,637]" name="Tavera, Department of Geology and Geophysics" pageId="4" pageNumber="157">T</collectionCode>
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</superScript>
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), isolated from sea sand collected in
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<location id="2E44A798590BFFF6FAFFFDD3FA74FD65" LSID="urn:lsid:plazi:treatment:A3324055590BFFF6FFADFB1DFB8AFD28:2E44A798590BFFF6FAFFFDD3FA74FD65" box="[1323,1434,626,650]" country="South Korea" municipality="The" name="Eurwangri" pageId="4" pageNumber="157">Eurwangri</location>
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in the
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<collectingCountry id="538CB1D3590BFFF6FCB1FD30FBC4FD47" box="[869,1066,657,681]" name="South Korea" pageId="4" pageNumber="157">Republic of Korea</collectingCountry>
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.
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<collectingMunicipality id="CB406B39590BFFF6FBE3FD30FB8EFD46" box="[1079,1120,657,681]" pageId="4" pageNumber="157">The</collectingMunicipality>
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genomic DNA G+C content of the type strain is 55.9 mol%
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</materialsCitation>
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.
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</paragraph>
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</subSubSection>
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</treatment>
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||
</document> |