178 lines
16 KiB
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178 lines
16 KiB
XML
<document ID-DOI="http://dx.doi.org/10.3897/mycokeys.95.98384" ID-Pensoft-Pub="1314-4049-95-15" ID-Pensoft-UUID="9265B921F42B5539BB743F8937C677B0" ModsDocID="1314-4049-95-15" checkinTime="1673408651837" checkinUser="pensoft" docAuthor="Jiang, Ning, Zhu, Ya-Quan, Xue, Han, Piao, Chun-Gen & Li, Yong" docDate="2023" docId="24795432F4C2587985F3C7B99BE789D1" docLanguage="en" docName="MycoKeys 95: 15-25" docOrigin="MycoKeys 95" docPubDate="2023-01-09" docSource="http://dx.doi.org/10.3897/mycokeys.95.98384" docTitle="Phaeotubakia Ning Jiang 2023, gen. nov." docType="treatment" docVersion="1" id="9265B921F42B5539BB743F8937C677B0" lastPageNumber="15" masterDocId="9265B921F42B5539BB743F8937C677B0" masterDocTitle="Phaeotubakia lithocarpicola gen. et sp. nov. (Tubakiaceae, Diaporthales) from leaf spots in China" masterLastPageNumber="25" masterPageNumber="15" pageNumber="15" updateTime="1673408651837" updateUser="pensoft">
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<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo>
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<mods:title>Phaeotubakia lithocarpicola gen. et sp. nov. (Tubakiaceae, Diaporthales) from leaf spots in China</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Jiang, Ning</mods:namePart>
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<mods:nameIdentifier type="ORCID">https://orcid.org/0000-0002-9656-8500</mods:nameIdentifier>
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<mods:affiliation>Key Laboratory of Biodiversity Conservation of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Zhu, Ya-Quan</mods:namePart>
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<mods:affiliation>Key Laboratory of Biodiversity Conservation of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Xue, Han</mods:namePart>
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<mods:affiliation>Key Laboratory of Biodiversity Conservation of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Piao, Chun-Gen</mods:namePart>
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<mods:affiliation>Key Laboratory of Biodiversity Conservation of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Li, Yong</mods:namePart>
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<mods:affiliation>Key Laboratory of Biodiversity Conservation of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, China</mods:affiliation>
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<mods:nameIdentifier type="email">aisuntaifu@163.com</mods:nameIdentifier>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:relatedItem type="host">
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<mods:titleInfo>
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<mods:title>MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2023</mods:date>
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<mods:detail type="pubDate">
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<mods:number>2023-01-09</mods:number>
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</mods:detail>
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<mods:detail type="volume">
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<mods:number>95</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>15</mods:start>
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<mods:end>25</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:location>
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<mods:url>http://dx.doi.org/10.3897/mycokeys.95.98384</mods:url>
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</mods:location>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">http://dx.doi.org/10.3897/mycokeys.95.98384</mods:identifier>
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<mods:identifier type="Pensoft-Pub">1314-4049-95-15</mods:identifier>
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<mods:identifier type="Pensoft-UUID">9265B921F42B5539BB743F8937C677B0</mods:identifier>
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</mods:mods>
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<treatment LSID="urn:lsid:plazi:treatment:24795432F4C2587985F3C7B99BE789D1" httpUri="http://treatment.plazi.org/id/24795432F4C2587985F3C7B99BE789D1" lastPageNumber="15" pageId="0" pageNumber="15">
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<subSubSection pageId="0" pageNumber="15" type="nomenclature">
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<paragraph pageId="0" pageNumber="15">
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<taxonomicName LSID="24795432-F4C2-5879-85F3-C7B99BE789D1" authority="Ning Jiang" authorityName="Ning Jiang" authorityYear="2023" family="Tubakiaceae" genus="Phaeotubakia" higherTaxonomySource="treatment-meta" kingdom="Fungi" lsidName="Phaeotubakia" order="Diaporthales" pageId="0" pageNumber="15" rank="genus" status="gen. nov.">Phaeotubakia Ning Jiang</taxonomicName>
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<taxonomicNameLabel pageId="0" pageNumber="15">gen. nov.</taxonomicNameLabel>
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="15" type="etymology">
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<paragraph pageId="0" pageNumber="15">Etymology.</paragraph>
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<paragraph pageId="0" pageNumber="15">
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Named derived from
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<emphasis italics="true" pageId="0" pageNumber="15">phaeo</emphasis>
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(= pigmented) and its morphological similarity to
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<taxonomicName authorityName="B.C.Sutton" authorityYear="1973" class="Sordariomycetes" family="Tubakiaceae" genus="Tubakia" kingdom="Fungi" lsidName="Tubakia" order="Diaporthales" pageId="0" pageNumber="15" phylum="Ascomycota" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="15">Tubakia</emphasis>
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</taxonomicName>
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.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="15" type="type species">
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<paragraph pageId="0" pageNumber="15">Type species.</paragraph>
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<paragraph pageId="0" pageNumber="15">
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<taxonomicName authorityName="Y. Q. Zhu & Ning Jiang" authorityYear="2023" family="Fagaceae" genus="Phaeotubakia" kingdom="Fungi" lsidName="Phaeotubakia lithocarpicola" order="Diaporthales" pageId="0" pageNumber="15" rank="species" species="lithocarpicola">
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<emphasis italics="true" pageId="0" pageNumber="15">Phaeotubakia lithocarpicola</emphasis>
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</taxonomicName>
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Y.Q. Zhu & Ning Jiang.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="15" type="description">
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<paragraph pageId="0" pageNumber="15">Description.</paragraph>
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<paragraph pageId="0" pageNumber="15">Sexual morph: Unknown. Asexual morph in vitro: Conidiomata sporodochial, slimy, black, semi-submerged. Conidiophores reduced to conidiogenous cells. Conidiogenous cells brown, smooth, guttulate, cylindrical to ampulliform, attenuate towards apex, phialidic. Conidia blastic, subglobose, broad ellipsoid to ellipsoid, seldom irregular, brown to dark brown, walls smooth, becoming thicker with age, base rounded or with truncate basal hilum.</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="15" type="notes">
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<paragraph pageId="0" pageNumber="15">Notes.</paragraph>
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<paragraph pageId="0" pageNumber="15">
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<taxonomicName authorityName="Ning Jiang" authorityYear="2023" family="Fagaceae" genus="Phaeotubakia" kingdom="Fungi" lsidName="Phaeotubakia" order="Diaporthales" pageId="0" pageNumber="15" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="15">Phaeotubakia</emphasis>
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</taxonomicName>
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is proposed as the eleventh genus of
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<taxonomicName authorityName="Ning Jiang" authorityYear="2023" family="Tubakiaceae" kingdom="Fungi" lsidName="" order="Diaporthales" pageId="0" pageNumber="15" rank="family">Tubakiaceae</taxonomicName>
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based on morphological features and phylogeny of combined ITS, LSU,
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<emphasis italics="true" pageId="0" pageNumber="15">tef1</emphasis>
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and
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<emphasis italics="true" pageId="0" pageNumber="15">tub2</emphasis>
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loci (Fig.
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<figureCitation captionStart="Figure 1" captionStartId="F1" captionText="Figure 1. Phylogram of Tubakiaceae based on combined ITS, LSU, tef 1 and tub 2 loci. Numbers above the branches indicate maximum parsimony bootstrap (MP BP ≥ 50 %), ML bootstrap values (ML-BS ≥ 50 %) and Bayesian Posterior Probabilities (BPP ≥ 0.9). The tree is rooted with Melanconis groenlandica (CBS 116540). Ex-type strains are marked with *, and strains from the present study are marked in bold blue." figureDoi="10.3897/mycokeys.95.98384.figure1" httpUri="https://binary.pensoft.net/fig/793188" pageId="0" pageNumber="15">1</figureCitation>
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).
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<taxonomicName authorityName="Ning Jiang" authorityYear="2023" family="Fagaceae" genus="Phaeotubakia" kingdom="Fungi" lsidName="Phaeotubakia" order="Diaporthales" pageId="0" pageNumber="15" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="15">Phaeotubakia</emphasis>
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</taxonomicName>
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is distinguished from
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<taxonomicName authorityName="U.Braun, J.Z.Groenew. & Crous" authorityYear="2018" class="Sordariomycetes" family="Tubakiaceae" genus="Apiognomonioides" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Apiognomonioides" order="Diaporthales" pageId="0" pageNumber="15" phylum="Ascomycota" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="15">Apiognomonioides</emphasis>
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</taxonomicName>
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,
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<taxonomicName authorityName="S.B.Liu, J.W.Xia & X.G.Zhang" authorityYear="2022" class="Sordariomycetes" family="Tubakiaceae" genus="Ellipsoidisporodochium" kingdom="Fungi" lsidName="Ellipsoidisporodochium" order="Diaporthales" pageId="0" pageNumber="15" phylum="Ascomycota" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="15">Ellipsoidisporodochium</emphasis>
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</taxonomicName>
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,
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<taxonomicName class="Sordariomycetes" family="Melanconiellaceae" genus="Involutiscutellula" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Involutiscutellula" order="Diaporthales" pageId="0" pageNumber="15" phylum="Ascomycota" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="15">Involutiscutellula</emphasis>
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</taxonomicName>
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,
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<taxonomicName class="Sordariomycetes" family="Melanconiellaceae" genus="Oblongisporothyrium" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Oblongisporothyrium" order="Diaporthales" pageId="0" pageNumber="15" phylum="Ascomycota" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="15">Oblongisporothyrium</emphasis>
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</taxonomicName>
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,
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<taxonomicName authorityName="Z.X.Zhang, J.W.Xia & X.G.Zhang" authorityYear="2021" class="Sordariomycetes" family="Tubakiaceae" genus="Obovoideisporodochium" kingdom="Fungi" lsidName="Obovoideisporodochium" order="Diaporthales" pageId="0" pageNumber="15" phylum="Ascomycota" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="15">Obovoideisporodochium</emphasis>
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</taxonomicName>
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,
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<taxonomicName class="Sordariomycetes" family="Tubakiaceae" genus="Paratubakia" kingdom="Fungi" lsidName="Paratubakia" order="Diaporthales" pageId="0" pageNumber="15" phylum="Ascomycota" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="15">Paratubakia</emphasis>
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</taxonomicName>
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,
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<taxonomicName class="Sordariomycetes" family="Tubakiaceae" genus="Racheliella" kingdom="Fungi" lsidName="Racheliella" order="Diaporthales" pageId="0" pageNumber="15" phylum="Ascomycota" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="15">Racheliella</emphasis>
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</taxonomicName>
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,
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<taxonomicName class="Sordariomycetes" family="Tubakiaceae" genus="Saprothyrium" kingdom="Fungi" lsidName="Saprothyrium" order="Diaporthales" pageId="0" pageNumber="15" phylum="Ascomycota" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="15">Saprothyrium</emphasis>
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</taxonomicName>
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and
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<taxonomicName class="Sordariomycetes" family="Tubakiaceae" genus="Sphaerosporithyrium" kingdom="Fungi" lsidName="Sphaerosporithyrium" order="Diaporthales" pageId="0" pageNumber="15" phylum="Ascomycota" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="15">Sphaerosporithyrium</emphasis>
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</taxonomicName>
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by having brown to dark brown conidia (
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<bibRefCitation DOI="https://doi.org/10.3114/fuse.2018.01.04" author="Braun, U" journalOrPublisher="Fungal Systematics and Evolution" pageId="0" pageNumber="15" pagination="41 - 99" refId="B2" refString="Braun, U, Nakashima, C, Crous, PW, Groenewald, JZ, Moreno-Rico, O, Rooney-Latham, S, Blomquist, CL, Haas, J, Marmolejo, J, 2018. Phylogeny and taxonomy of the genus Tubakia s. lat. Fungal Systematics and Evolution 1 (1): 41 - 99, DOI: https://doi.org/10.3114/fuse.2018.01.04" title="Phylogeny and taxonomy of the genus Tubakia s. lat." url="https://doi.org/10.3114/fuse.2018.01.04" volume="1" year="2018">Braun et al. 2018</bibRefCitation>
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;
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<bibRefCitation DOI="https://doi.org/10.3897/mycokeys.84.73940" author="Zhang, ZX" journalOrPublisher="MycoKeys" pageId="0" pageNumber="15" pagination="185 - 201" refId="B28" refString="Zhang, ZX, Mu, TC, Liu, SB, Liu, RY, Zhang, XG, Xia, JW, 2021. Morphological and phylogenetic analyses reveal a new genus and two new species of Tubakiaceae from China. MycoKeys 84: 185 - 201, DOI: https://doi.org/10.3897/mycokeys.84.73940" title="Morphological and phylogenetic analyses reveal a new genus and two new species of Tubakiaceae from China." url="https://doi.org/10.3897/mycokeys.84.73940" volume="84" year="2021">Zhang et al. 2021</bibRefCitation>
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). Several species of
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<taxonomicName authorityName="B.C.Sutton" authorityYear="1973" class="Sordariomycetes" family="Tubakiaceae" genus="Tubakia" kingdom="Fungi" lsidName="Tubakia" order="Diaporthales" pageId="0" pageNumber="15" phylum="Ascomycota" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="15">Tubakia</emphasis>
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</taxonomicName>
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are known to have brown conidia, which is similar to
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<taxonomicName authorityName="Y. Q. Zhu & Ning Jiang" authorityYear="2023" family="Fagaceae" genus="Phaeotubakia" kingdom="Fungi" lsidName="Phaeotubakia lithocarpicola" order="Diaporthales" pageId="0" pageNumber="15" rank="species" species="lithocarpicola">
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<emphasis italics="true" pageId="0" pageNumber="15">Phaeotubakia lithocarpicola</emphasis>
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</taxonomicName>
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(
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<bibRefCitation DOI="https://doi.org/10.3114/fuse.2018.01.04" author="Braun, U" journalOrPublisher="Fungal Systematics and Evolution" pageId="0" pageNumber="15" pagination="41 - 99" refId="B2" refString="Braun, U, Nakashima, C, Crous, PW, Groenewald, JZ, Moreno-Rico, O, Rooney-Latham, S, Blomquist, CL, Haas, J, Marmolejo, J, 2018. Phylogeny and taxonomy of the genus Tubakia s. lat. Fungal Systematics and Evolution 1 (1): 41 - 99, DOI: https://doi.org/10.3114/fuse.2018.01.04" title="Phylogeny and taxonomy of the genus Tubakia s. lat." url="https://doi.org/10.3114/fuse.2018.01.04" volume="1" year="2018">Braun et al. 2018</bibRefCitation>
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;
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<bibRefCitation DOI="https://doi.org/10.3390/jof8111143" author="Zhu, YQ" journalOrPublisher="Journal of Fungi (Basel, Switzerland)" pageId="0" pageNumber="15" pagination=": 1143" refId="B29" refString="Zhu, YQ, Jiang, N, Dou, ZP, Xue, H, Piao, CG, Li, Y, 2022. Additions to the knowledge of Tubakia (Tubakiaceae, Diaporthales) in China. Journal of Fungi (Basel, Switzerland) 8 (11): 1143, DOI: https://doi.org/10.3390/jof8111143" title="Additions to the knowledge of Tubakia (Tubakiaceae, Diaporthales) in China." url="https://doi.org/10.3390/jof8111143" volume="8" year="2022">Zhu et al. 2022</bibRefCitation>
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). However, they are phylogenetically distinct (Fig.
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<figureCitation captionStart="Figure 1" captionStartId="F1" captionText="Figure 1. Phylogram of Tubakiaceae based on combined ITS, LSU, tef 1 and tub 2 loci. Numbers above the branches indicate maximum parsimony bootstrap (MP BP ≥ 50 %), ML bootstrap values (ML-BS ≥ 50 %) and Bayesian Posterior Probabilities (BPP ≥ 0.9). The tree is rooted with Melanconis groenlandica (CBS 116540). Ex-type strains are marked with *, and strains from the present study are marked in bold blue." figureDoi="10.3897/mycokeys.95.98384.figure1" httpUri="https://binary.pensoft.net/fig/793188" pageId="0" pageNumber="15">1</figureCitation>
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).
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |