162 lines
15 KiB
XML
162 lines
15 KiB
XML
<document id="1D40ECED3ADF79953CDDCC9DE5F92618" ID-CLB-Dataset="20544" ID-DOI="10.1099/ijsem.0.002794" ID-GBIF-Dataset="14345e8c-1222-4fed-a432-8676d29d3017" ID-ISSN="1466-5034" ID-Zenodo-Dep="6223779" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1645465675132" checkinUser="felipe" docAuthor="Xi, Lijun, Qiao, Nenghu, Liu, Dejian, Li, Jing, Zhang, Jingjing & Liu, Jianguo" docDate="2018" docId="03BE2777FF92FFC8FFB36578559E0C19" docLanguage="en" docName="IntJSystEvolMicrobiol.68.6.2042-2047.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 68 (6)" docSource="http://dx.doi.org/10.1099/ijsem.0.002794" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Pannonibacter carbonis Xi & Qiao & Liu & Li & Zhang & Liu 2018, SP. NOV." docType="treatment" docVersion="7" lastPageNumber="2046" masterDocId="FF875F0FFF96FFCCFFCA674055730A6F" masterDocTitle="Pannonibacter carbonis sp. nov., isolated from coal mine water" masterLastPageNumber="2047" masterPageNumber="2042" pageNumber="2046" updateTime="1699315824134" updateUser="ExternalLinkService">
|
||
<mods:mods id="118C4E3D2445248EAB886C65D5107958" xmlns:mods="http://www.loc.gov/mods/v3">
|
||
<mods:titleInfo id="21324917354F4B46EFB880003BE74B10">
|
||
<mods:title id="B1CB9024E009AA2CB7F4AC1D5C087AD6">Pannonibacter carbonis sp. nov., isolated from coal mine water</mods:title>
|
||
</mods:titleInfo>
|
||
<mods:name id="923A4995783D92BD5F05433464E9D879" type="personal">
|
||
<mods:role id="8CD704B4080DBC9EA6BE14B208D1718E">
|
||
<mods:roleTerm id="1B8B044075D1E417B92DCE8012AB19E2">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="B55B8BF613973CBA9DD8EAD108337A56">Xi, Lijun</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="DB3390D5A8CDF289A2E5A974203518F6" type="personal">
|
||
<mods:role id="3FD4C500C6F24EDC9453812E58D09C4A">
|
||
<mods:roleTerm id="25527959C25399D6FDABCAC645EA033A">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="50793822F8377C351CB724CC444CAA00">Qiao, Nenghu</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="C0F74D5323F878BD9E3C344B1A17BBFD" type="personal">
|
||
<mods:role id="B346AA6864E90F96B7C1F3E1B17C2176">
|
||
<mods:roleTerm id="4F95B4D63F19415BB3DAB80086FD0F81">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="CF309771514272AA90856C44988E1FB4">Liu, Dejian</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="D030A066B273247FE18753271F633C54" type="personal">
|
||
<mods:role id="05740E9CEA5390A3C2F0BE7C2244BD1D">
|
||
<mods:roleTerm id="6F1B72A73EFEFCF54A15CC7DFAAEC7DE">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="CE137085A3E183618DB532563B26677C">Li, Jing</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="136740EBED121FC1102582780177D325" type="personal">
|
||
<mods:role id="226CC9D60B09100610992A17A3C40EBB">
|
||
<mods:roleTerm id="5AEE878FFAC4F6540B0596A8D3AC64C1">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="06FCC873C6A4B80478209140C6ED3956">Zhang, Jingjing</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="F605EF256C99C7ADB176E321B12F5D08" type="personal">
|
||
<mods:role id="454587F0BE74639CB7A9C3E5DEFB5582">
|
||
<mods:roleTerm id="93D6FF83596855757B4B67000DFD096C">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="A6D1B260A211EACF32E13B9B3314DBFE">Liu, Jianguo</mods:namePart>
|
||
</mods:name>
|
||
<mods:typeOfResource id="D055DD924A92320C3AFF16FBBAD68C0D">text</mods:typeOfResource>
|
||
<mods:relatedItem id="4262B27D489C01C7F7A28EF3757C19A8" type="host">
|
||
<mods:titleInfo id="D4E171014972F48A301B3F13CB6E8C80">
|
||
<mods:title id="AC41F419A2364DB3693790968BDCB4B6">International Journal of Systematic and Evolutionary Microbiology</mods:title>
|
||
</mods:titleInfo>
|
||
<mods:part id="9C868EC47319AFB4D38DE249A319E6C8">
|
||
<mods:date id="1AB26FE9343AA7147DFD9AE24A9F42B0">2018</mods:date>
|
||
<mods:detail id="0CE105692B4850E59EE0C578D1064D84" type="pubDate">
|
||
<mods:number id="CF8BFFAA593BCE84F06E552FEC438413">2018-06-01</mods:number>
|
||
</mods:detail>
|
||
<mods:detail id="54AEA84147B2CBEC4F541234A4F61455" type="volume">
|
||
<mods:number id="57F2378DBDCA18E9048C7F9B4DB51AB2">68</mods:number>
|
||
</mods:detail>
|
||
<mods:detail id="40F1B65CCC8138E065E0BEC9A57A976F" type="issue">
|
||
<mods:number id="733CC1FFD2F7D822C2B7926E38B6CFC4">6</mods:number>
|
||
</mods:detail>
|
||
<mods:extent id="79CC3A59131B48DEE513284450B4F568" unit="page">
|
||
<mods:start id="B1F17ACA2F9F852AC8DC3E114538BEA7">2042</mods:start>
|
||
<mods:end id="D7F4400F7435B6CB8DDD8B9CD09C1034">2047</mods:end>
|
||
</mods:extent>
|
||
</mods:part>
|
||
</mods:relatedItem>
|
||
<mods:location id="1DF5C679197CF0A51313189D1AC9F95D">
|
||
<mods:url id="43C9FD00CE1D98FB1C374ADD8BCD0A57">http://dx.doi.org/10.1099/ijsem.0.002794</mods:url>
|
||
</mods:location>
|
||
<mods:classification id="7CD1E325AEF3FEEB5C9805F71AFD7BB3">journal article</mods:classification>
|
||
<mods:identifier id="CF1748AB8051B8D344B62B7EBBCEB54C" type="CLB-Dataset">20544</mods:identifier>
|
||
<mods:identifier id="FD292F876AAFB483FA302785BDE08225" type="DOI">10.1099/ijsem.0.002794</mods:identifier>
|
||
<mods:identifier id="FA7901A8B55B556473FAFAB571E7A61E" type="GBIF-Dataset">14345e8c-1222-4fed-a432-8676d29d3017</mods:identifier>
|
||
<mods:identifier id="6049A562F9F998114EE960782968996F" type="ISSN">1466-5034</mods:identifier>
|
||
<mods:identifier id="57583CA213E8F5ED910844EEB376E53B" type="Zenodo-Dep">6223779</mods:identifier>
|
||
</mods:mods>
|
||
<treatment id="03BE2777FF92FFC8FFB36578559E0C19" ID-GBIF-Taxon="193437496" LSID="urn:lsid:plazi:treatment:03BE2777FF92FFC8FFB36578559E0C19" httpUri="http://treatment.plazi.org/id/03BE2777FF92FFC8FFB36578559E0C19" lastPageNumber="2046" pageId="4" pageNumber="2046">
|
||
<subSubSection id="C30DC5EAFF92FFC8FFB3657855870815" pageId="4" pageNumber="2046" type="nomenclature">
|
||
<paragraph id="8BA89661FF92FFC8FFB3657855870815" blockId="4.[121,759,568,1654]" pageId="4" pageNumber="2046">
|
||
<heading id="D0E0210DFF92FFC8FFB3657855870815" allCaps="true" bold="true" centered="true" fontSize="12" level="2" pageId="4" pageNumber="2046" reason="3">
|
||
<emphasis id="B9634A73FF92FFC8FFB3657855870815" bold="true" pageId="4" pageNumber="2046">
|
||
DESCRIPTION OF
|
||
<taxonomicName id="4C17EDE2FF92FFC8FEA46578579E083A" authority="Xi & Qiao & Liu & Li & Zhang & Liu, 2018" authorityName="Xi & Qiao & Liu & Li & Zhang & Liu" authorityYear="2018" box="[366,749,568,597]" class="Alphaproteobacteria" family="Rhodobacteraceae" genus="Pannonibacter" kingdom="Bacteria" order="Rhodobacterales" pageId="4" pageNumber="2042" phylum="Proteobacteria" rank="species" species="carbonis" status="sp. nov.">
|
||
<emphasis id="B9634A73FF92FFC8FEA46578579E083A" bold="true" box="[366,749,568,597]" italics="true" pageId="4" pageNumber="2046">PANNONIBACTER CARBONIS</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="A250F708FF92FFC8FFB3651D55870815" box="[121,244,605,634]" pageId="4" pageNumber="2046" rank="species">SP. NOV.</taxonomicNameLabel>
|
||
</emphasis>
|
||
</heading>
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C30DC5EAFF92FFC8FFB365C9544708D0" pageId="4" pageNumber="2046" type="etymology">
|
||
<paragraph id="8BA89661FF92FFC8FFB365C9544708D0" blockId="4.[121,759,568,1654]" pageId="4" pageNumber="2046">
|
||
<taxonomicName id="4C17EDE2FF92FFC8FFB365C9540408CE" authorityName="Xi & Qiao & Liu & Li & Zhang & Liu" authorityYear="2018" box="[121,375,649,673]" class="Alphaproteobacteria" family="Rhodobacteraceae" genus="Pannonibacter" kingdom="Bacteria" order="Rhodobacterales" pageId="4" pageNumber="2046" phylum="Proteobacteria" rank="species" species="carbonis">
|
||
<emphasis id="B9634A73FF92FFC8FFB365C9540408CE" box="[121,375,649,673]" italics="true" pageId="4" pageNumber="2046">Pannonibacter carbonis</emphasis>
|
||
</taxonomicName>
|
||
(car.bo′ nis. L. gen. n.
|
||
<taxonomicName id="4C17EDE2FF92FFC8FDB765C957A608CE" authorityName="Xi & Qiao & Liu & Li & Zhang & Liu" authorityYear="2018" box="[637,725,649,673]" class="Alphaproteobacteria" family="Rhodobacteraceae" genus="Pannonibacter" kingdom="Bacteria" order="Rhodobacterales" pageId="4" pageNumber="2046" phylum="Proteobacteria" rank="species" species="carbonis">
|
||
<emphasis id="B9634A73FF92FFC8FDB765C957A608CE" box="[637,725,649,673]" italics="true" pageId="4" pageNumber="2046">carbonis</emphasis>
|
||
</taxonomicName>
|
||
of coal, of charcoal).
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C30DC5EAFF92FFC8FFB36596559E0C19" pageId="4" pageNumber="2046" type="description">
|
||
<paragraph id="8BA89661FF92FFC8FFB3659654E10FA2" blockId="4.[121,759,568,1654]" pageId="4" pageNumber="2046">
|
||
Cells are facultatively anaerobic, Gram-stain-negative, rod shaped, motile by means of a single polar flagellum and contain PHA. They are 0.3
|
||
<emphasis id="B9634A73FF92FFC8FEB3645A54F40943" box="[377,391,794,812]" italics="true" pageId="4" pageNumber="2046">–</emphasis>
|
||
0.7 µm wide and 1.8
|
||
<emphasis id="B9634A73FF92FFC8FDAE645A57010943" box="[612,626,794,812]" italics="true" pageId="4" pageNumber="2046">–</emphasis>
|
||
3.0 µm long. Colonies grown on TSA plates are smooth, cream-coloured and approximately
|
||
<quantity id="4CEF3B84FF92FFC8FE8D641154C20907" box="[327,433,848,873]" metricMagnitude="-3" metricUnit="m" metricValue="1.3" metricValueMax="1.6" metricValueMin="1.0" pageId="4" pageNumber="2046" unit="mm" value="1.3" valueMax="1.6" valueMin="1.0">
|
||
1
|
||
<emphasis id="B9634A73FF92FFC8FE9E641754110906" box="[340,354,855,873]" italics="true" pageId="4" pageNumber="2046">–</emphasis>
|
||
1.6 mm
|
||
</quantity>
|
||
in diameter. They do not produce BChl a. Cells grow in TSB in the presence of 0
|
||
<emphasis id="B9634A73FF92FFC8FD78643557B309E8" box="[690,704,885,903]" italics="true" pageId="4" pageNumber="2046">–</emphasis>
|
||
5.5 % (w/v) NaCl (optimum 0
|
||
<emphasis id="B9634A73FF92FFC8FE4B64D454FC09C9" box="[385,399,916,934]" italics="true" pageId="4" pageNumber="2046">–</emphasis>
|
||
2.0 %), at 4
|
||
<emphasis id="B9634A73FF92FFC8FDC064D4576B09C9" box="[522,536,916,934]" italics="true" pageId="4" pageNumber="2046">–</emphasis>
|
||
55
|
||
<superScript id="7C623B29FF92FFC8FDFF64CC574F09F8" attach="right" box="[565,572,908,919]" fontSize="6" pageId="4" pageNumber="2046">Ǫ</superScript>
|
||
C (optimum 30
|
||
<emphasis id="B9634A73FF92FFC8FD2364D4578409C9" box="[745,759,916,934]" italics="true" pageId="4" pageNumber="2046">–</emphasis>
|
||
35
|
||
<superScript id="7C623B29FF92FFC8FF5D64EA55ED09DA" attach="right" box="[151,158,938,949]" fontSize="6" pageId="4" pageNumber="2046">Ǫ</superScript>
|
||
C) and at pH 3.5
|
||
<emphasis id="B9634A73FF92FFC8FE9B64F3542C09AA" box="[337,351,947,965]" italics="true" pageId="4" pageNumber="2046">–</emphasis>
|
||
10.5 (optimum 6.5
|
||
<emphasis id="B9634A73FF92FFC8FDE964F3574209AA" box="[547,561,947,965]" italics="true" pageId="4" pageNumber="2046">–</emphasis>
|
||
8.0). They are positive for catalase, oxidase, urease, VP test, gelatin hydrolysis and H
|
||
<subScript id="17939424FF92FFC8FF0964B455BE0E6A" attach="both" box="[195,205,1012,1029]" fontSize="7" pageId="4" pageNumber="2046">2</subScript>
|
||
S production, but negative for nitrate reduction, indole production and Tween 80 hydrolyzation. D- Galactose, D- glucose, maltose, trehalose, o-nitrophenyl-b- D- galactoside, arginine, lysine, ornithine, sodium citrate, sorbitol, mannitol, potassium gluconate, wood sugar and xylitol can be used as a sole carbon source; however, arabinose, erythritol, mannose, lactose, adipic acid, inositol and starch cannot be used as a sole carbon source. Sucrose is weakly assimilated. Acid is aerobically produced from adipic acid, D- galactose, D- glucose, sorbitol, xylitol, mannose, lactose, potassium gluconate and wood sugar. The major cellular fatty acid is C
|
||
<subScript id="17939424FF92FFC8FEC4620554450F39" attach="right" box="[270,310,1349,1366]" fontSize="7" pageId="4" pageNumber="2046">18: 1</subScript>
|
||
<emphasis id="B9634A73FF92FFC8FEFF6201542F0F3D" box="[309,348,1339,1363]" italics="true" pageId="4" pageNumber="2046">Ɯ7c</emphasis>
|
||
. The principal quinone is Q-10. Polar lipids include diphosphatidyl glycerol, phosphatidyl glycerol, phosphatidyl ethanolamine, phosphatidyl choline, an unidentified amino lipid, two unidentified phospholipids and one unidentified lipid.
|
||
</paragraph>
|
||
<paragraph id="8BA89661FF92FFC8FFB362A4559E0C19" blockId="4.[121,759,568,1654]" pageId="4" pageNumber="2046">
|
||
<materialsCitation id="3B7F9C3CFF92FFC8FFB362A4559E0C19" ID-GBIF-Occurrence="3470286301" collectionCode="Q" country="China" location="Jinchen" pageId="4" pageNumber="2046" specimenCode="Q4.6T" specimenCount="1" stateProvince="Shanxi Province" typeStatus="holotype">
|
||
The
|
||
<typeStatus id="54AC28C3FF92FFC8FF6362A455A50F93" box="[169,214,1508,1532]" pageId="4" pageNumber="2046">type</typeStatus>
|
||
strain is
|
||
<taxonomicName id="4C17EDE2FF92FFC8FEF362A457410F93" authorityName="Xi & Qiao & Liu & Li & Zhang & Liu" authorityYear="2018" box="[313,562,1508,1532]" class="Alphaproteobacteria" family="Rhodobacteraceae" genus="Pannonibacter" kingdom="Bacteria" order="Rhodobacterales" pageId="4" pageNumber="2046" phylum="Proteobacteria" rank="species" species="carbonis">
|
||
<emphasis id="B9634A73FF92FFC8FEF362A457410F93" box="[313,562,1508,1532]" italics="true" pageId="4" pageNumber="2046">Pannonibacter carbonis</emphasis>
|
||
</taxonomicName>
|
||
<specimenCode id="DBB13E1AFF92FFC8FDF362A4570B0F80" box="[569,632,1502,1532]" pageId="4" pageNumber="2046">
|
||
Q4.6
|
||
<superScript id="7C623B29FF92FFC8FDA6629E570B0F80" attach="left" box="[620,632,1502,1519]" fontSize="7" pageId="4" pageNumber="2046">T</superScript>
|
||
</specimenCode>
|
||
(=CGMCC 1.15703
|
||
<superScript id="7C623B29FF92FFC8FF0162BC55A40C62" attach="none" box="[203,215,1532,1549]" fontSize="7" pageId="4" pageNumber="2046">T</superScript>
|
||
=KCTC 52466
|
||
<superScript id="7C623B29FF92FFC8FEBC62BC54F10C62" attach="none" box="[374,386,1532,1549]" fontSize="7" pageId="4" pageNumber="2046">T</superScript>
|
||
), which was isolated from a coal mine water sample collected from a coal-producing well in
|
||
<location id="8EC8C0BAFF92FFC8FFB3610055BF0C37" LSID="urn:lsid:plazi:treatment:03BE2777FF92FFC8FFB36578559E0C19:8EC8C0BAFF92FFC8FFB3610055BF0C37" box="[121,204,1600,1624]" country="China" municipality="The" name="Jinchen" pageId="4" pageNumber="2046" stateProvince="Shanxi Province">Jinchen</location>
|
||
,
|
||
<collectingRegion id="49D35883FF92FFC8FF1D610054FB0C37" box="[215,392,1600,1624]" country="China" name="Shanxi" pageId="4" pageNumber="2046">Shanxi Province</collectingRegion>
|
||
,
|
||
<collectingCountry id="F300D6F1FF92FFC8FE5E610054A40C37" box="[404,471,1600,1624]" name="China" pageId="4" pageNumber="2046">China</collectingCountry>
|
||
. The DNA G+C content is 63.6 mol%.
|
||
</materialsCitation>
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |