247 lines
33 KiB
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247 lines
33 KiB
XML
<document id="44C3A504421FC4516D7011543189054F" ID-DOI="10.11646/phytotaxa.365.1.1" ID-ISSN="1179-3163" ID-Zenodo-Dep="13704923" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="felipe" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="GgImagineBatch" IM.taxonomicNames_approvedBy="felipe" IM.treatments_approvedBy="felipe" checkinTime="1725584015738" checkinUser="felipe" docAuthor="Mai, Truc, Johansen, Jeffrey R., Pietrasiak, Nicole, Bohunická, Markéta & Martin, Michael P." docDate="2018" docId="03BFDE646C43FFAA009AFC76FEF4FE07" docLanguage="en" docName="phytotaxa.365.1.1.pdf" docOrigin="Phytotaxa 365 (1)" docSource="http://dx.doi.org/10.11646/phytotaxa.365.1.1" docStyle="DocumentStyle:96748F8F1B6C902996E134952A3A36B9.13:Phytotaxa.2014-.journal_article" docStyleId="96748F8F1B6C902996E134952A3A36B9" docStyleName="Phytotaxa.2014-.journal_article" docStyleVersion="13" docTitle="Kaiparowitsia implicata Mai, Johansen et Bohunicka 2018, sp. nov." docType="treatment" docVersion="2" lastPageNumber="47" masterDocId="FF86A61C6C6EFF840012FFAAFF98FF96" masterDocTitle="Revision of the Synechococcales (Cyanobacteria) through recognition of four families including Oculatellaceae fam. nov. and Trichocoleaceae fam. nov. and six new genera containing 14 species" masterLastPageNumber="59" masterPageNumber="1" pageNumber="46" updateTime="1725596029488" updateUser="ExternalLinkService" zenodo-license-figures="UNSPECIFIED" zenodo-license-treatments="UNSPECIFIED">
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<mods:title id="A37EF48309357D57DBFA6A0B1A3FF533">Revision of the Synechococcales (Cyanobacteria) through recognition of four families including Oculatellaceae fam. nov. and Trichocoleaceae fam. nov. and six new genera containing 14 species</mods:title>
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<mods:namePart id="70EF8DDAA3B03DE09B74587D41AEF74E">Mai, Truc</mods:namePart>
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<mods:affiliation id="8524810A3D68C28D9ECE30534F468C6E">Department of Biology, John Carroll University, 1 John Carroll Blvd., University Heights, Ohio 44118, USA & Department of Plant and Environmental Sciences, New Mexico State University, Skeen Hall Room N 127, P. O Box 30003 MSC 3 Q, Las Cruces, New Mexico 88003, USA.</mods:affiliation>
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<mods:namePart id="0ABC48999C71F87A34DF90AE74CC2ABE">Johansen, Jeffrey R.</mods:namePart>
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<mods:affiliation id="A0F1AF7787FC50A68CDC5F456CB64037">Department of Biology, John Carroll University, 1 John Carroll Blvd., University Heights, Ohio 44118, USA & Department of Botany, Faculty of Science, University of South Bohemia, 31 Branišovská, 37005 České Budějovice, Czech Republic</mods:affiliation>
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<mods:namePart id="003DF491231ECBDE3315B0EA94942B5F">Pietrasiak, Nicole</mods:namePart>
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<mods:affiliation id="2B051BAFC16FB3F1EEE8A495099A0728">Department of Plant and Environmental Sciences, New Mexico State University, Skeen Hall Room N 127, P. O Box 30003 MSC 3 Q, Las Cruces, New Mexico 88003, USA.</mods:affiliation>
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<mods:namePart id="68E0568A887BB6174EEE8C78D8F73D49">Bohunická, Markéta</mods:namePart>
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<mods:namePart id="16C11CC542E4E7E1F0CDDC74C68E75D3">Martin, Michael P.</mods:namePart>
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<mods:affiliation id="F590B9EA6B5795BB276E4DA684557E14">Department of Biology, John Carroll University, 1 John Carroll Blvd., University Heights, Ohio 44118, USA</mods:affiliation>
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<mods:title id="B2B64FE5375A803BDC84447A67CBB54E">Phytotaxa</mods:title>
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<mods:part id="2FF3EBEDF42B740C4B599F8A5FF6D8B5">
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<mods:date id="F13E380A89940D87A095E2B33AD429FD">2018</mods:date>
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<mods:number id="049ED5006FA06753AE9700E65D9AE923">2018-08-16</mods:number>
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<mods:number id="16668321D025E6A24CC64EBE91A853F3">365</mods:number>
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<mods:url id="49F333C1F91580327A514D5363CED10B">http://dx.doi.org/10.11646/phytotaxa.365.1.1</mods:url>
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<mods:classification id="81F1E705558ACB2B5453C14E5586E7A5">journal article</mods:classification>
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<mods:identifier id="C1AA80E3B6C85889595C2023959BED3D" type="DOI">10.11646/phytotaxa.365.1.1</mods:identifier>
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<mods:identifier id="93159893F40C2439B6E73CD9BEF26FDA" type="ISSN">1179-3163</mods:identifier>
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<treatment id="03BFDE646C43FFAA009AFC76FEF4FE07" ID-DOI="http://doi.org/10.5281/zenodo.13704902" ID-Zenodo-Dep="13704902" LSID="urn:lsid:plazi:treatment:03BFDE646C43FFAA009AFC76FEF4FE07" httpUri="http://treatment.plazi.org/id/03BFDE646C43FFAA009AFC76FEF4FE07" lastPageId="46" lastPageNumber="47" pageId="45" pageNumber="46">
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<subSubSection id="C30C3CF96C43FFA9009AFC76FCC9FC63" box="[136,849,988,1013]" pageId="45" pageNumber="46" type="nomenclature">
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<paragraph id="8BA96F726C43FFA9009AFC76FCC9FC63" blockId="45.[136,1452,988,2093]" box="[136,849,988,1013]" pageId="45" pageNumber="46">
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<heading id="D0E1D81E6C43FFA9009AFC76FCC9FC63" bold="true" box="[136,849,988,1013]" fontSize="11" level="1" pageId="45" pageNumber="46" reason="1">
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<emphasis id="B962B3606C43FFA9009AFC76FCC9FC63" bold="true" box="[136,849,988,1013]" pageId="45" pageNumber="46">
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<taxonomicName id="4C1614F16C43FFA9009AFC76FD6BFC63" authority="Mai, Johansen et Bohunicka" authorityName="Mai, Johansen et Bohunicka" authorityYear="2018" box="[136,755,988,1013]" class="Cyanobacteriia" family="Oculatellaceae" genus="Kaiparowitsia" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="45" pageNumber="46" phylum="Cyanobacteria" rank="species" species="implicata" status="sp. nov.">
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<emphasis id="B962B3606C43FFA9009AFC76FE02FC63" bold="true" box="[136,410,988,1013]" italics="true" pageId="45" pageNumber="46">Kaiparowitsia implicata</emphasis>
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Mai, Johansen
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<emphasis id="B962B3606C43FFA90245FC76FDF3FC63" bold="true" box="[599,619,988,1013]" italics="true" pageId="45" pageNumber="46">et</emphasis>
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Bohunická
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</taxonomicName>
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<emphasis id="B962B3606C43FFA902E8FC76FCC9FC63" bold="true" box="[762,849,988,1013]" italics="true" pageId="45" pageNumber="46">
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<taxonomicNameLabel id="A2510E1B6C43FFA902E8FC76FCC9FC63" box="[762,849,988,1013]" pageId="45" pageNumber="46" rank="species">sp. nov.</taxonomicNameLabel>
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</emphasis>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C30C3CF96C43FFA9009AFBAAFB5BFB13" pageId="45" pageNumber="46" type="diagnosis">
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<paragraph id="8BA96F726C43FFA9009AFBAAFB5BFB13" blockId="45.[136,1452,988,2093]" pageId="45" pageNumber="46">
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<emphasis id="B962B3606C43FFA9009AFBAAFEB9FB8F" bold="true" box="[136,289,1024,1049]" pageId="45" pageNumber="46">Diagnosis:—</emphasis>
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Considerably similar to the morphology of
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<taxonomicName id="4C1614F16C43FFA90337FBAAFCE5FB8F" authorityName="ZEHNDER" authorityYear="1965" box="[805,893,1024,1049]" class="Cyanobacteriia" family="Oculatellaceae" genus="Tildeniella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="45" pageNumber="46" phylum="Cyanobacteria" rank="species" species="nuda">
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<emphasis id="B962B3606C43FFA90337FBAAFCE5FB8F" box="[805,893,1024,1049]" italics="true" pageId="45" pageNumber="46">T. nuda</emphasis>
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</taxonomicName>
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, however differing in the occasional formation of
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<taxonomicName id="4C1614F16C43FFA900BBFB8EFEB7FBAB" authorityName="Komarek & Lukavsky" authorityYear="1988" box="[169,303,1060,1085]" class="Insecta" family="Stratiomyidae" genus="Arthronema" kingdom="Animalia" order="Diptera" pageId="45" pageNumber="46" phylum="Arthropoda" rank="genus">
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<emphasis id="B962B3606C43FFA900BBFB8EFEB7FBAB" box="[169,303,1060,1085]" italics="true" pageId="45" pageNumber="46">Arthronema</emphasis>
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</taxonomicName>
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-like outgrowths (
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<figureCitation id="132D73F76C43FFA901EFFB8EFDE7FBAB" box="[509,639,1060,1085]" captionStart="FIGURE 23" captionStartId="46.[136,229,1951,1972]" captionTargetBox="[164,1422,422,1923]" captionTargetId="figure-101@46.[164,1423,422,1923]" captionTargetPageId="46" captionText="FIGURE 23.Kaiparowitsiaimplicata.A.Fasicles of trichomeswithout common sheath.B–C.Tightlyentangled filaments forming compact coils. D. Disintegration of trichomes within common sheath occasionally observed. E–F. Nodule formation common. F–H. Distinctively longer than width common cells and crooked, Arthronema-like involution from cells along trichomes. G–I. Multiple trichomes entangled within one common sheath also observed. Scale bar 10μm in 1000X magnification." figureDoi="http://doi.org/10.5281/zenodo.13704981" httpUri="https://zenodo.org/record/13704981/files/figure.png" pageId="45" pageNumber="46">
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Figs.
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<quantity id="4CEEC2976C43FFA9022DFB8EFDF1FBAB" box="[575,617,1060,1085]" metricMagnitude="-2" metricUnit="kg" metricValue="2.3" pageId="45" pageNumber="46" unit="g" value="23.0">23g</quantity>
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–i
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</figureCitation>
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at arrows). Other distinctive characteristics observed in the secondary structure of conserved ITS domains, especially in the long and unique sequence of D1-D1’ helix and a likely C→ U mutation (position 101) in the 3’ basal unilateral bulge unique among
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<taxonomicName id="4C1614F16C43FFA90385FBC6FBA4FB13" authorityName="Mai et Johansen" authorityYear="2018" box="[919,1084,1132,1157]" class="Cyanobacteriia" family="Oculatellaceae" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="45" pageNumber="46" phylum="Cyanobacteria" rank="family">Oculatellaceae</taxonomicName>
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(
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<figureCitation id="132D73F76C43FFA90459FBC6FB2FFB13" box="[1099,1207,1132,1157]" captionStart="FIGURE 6" captionStartId="15.[136,229,1976,1997]" captionTargetBox="[157,1425,273,1857]" captionTargetId="figure-14@15.[151,1436,267,1882]" captionTargetPageId="15" captionText="FIGURE 6. D1-D1’ stems of species described in Oculatellaceae.The stem structures of genera described previously in other publications (Oculatella, Thermoleptolyngbya, Timaviella) or in publications under provision (Trichotorquatus) are not shown here." figureDoi="http://doi.org/10.5281/zenodo.13704935" httpUri="https://zenodo.org/record/13704935/files/figure.png" pageId="45" pageNumber="46">Fig. 6q–r</figureCitation>
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).
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</paragraph>
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</subSubSection>
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||
<subSubSection id="C30C3CF96C43FFA900AFFB3AFB3AF953" pageId="45" pageNumber="46" type="description">
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<paragraph id="8BA96F726C43FFA900AFFB3AFAA5FA33" blockId="45.[136,1452,988,2093]" pageId="45" pageNumber="46">
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<emphasis id="B962B3606C43FFA900AFFB3AFEF5FB3F" bold="true" box="[189,365,1168,1193]" pageId="45" pageNumber="46">Description:—</emphasis>
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Colony radially spreading, becoming mucilaginous with age, bright blue-green, green, or olive green. Filaments flexuous, entangled, sometimes fasciculated (
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<figureCitation id="132D73F76C43FFA90341FB1EFC4AFB5B" box="[851,978,1204,1229]" captionStart="FIGURE 23" captionStartId="46.[136,229,1951,1972]" captionTargetBox="[164,1422,422,1923]" captionTargetId="figure-101@46.[164,1423,422,1923]" captionTargetPageId="46" captionText="FIGURE 23.Kaiparowitsiaimplicata.A.Fasicles of trichomeswithout common sheath.B–C.Tightlyentangled filaments forming compact coils. D. Disintegration of trichomes within common sheath occasionally observed. E–F. Nodule formation common. F–H. Distinctively longer than width common cells and crooked, Arthronema-like involution from cells along trichomes. G–I. Multiple trichomes entangled within one common sheath also observed. Scale bar 10μm in 1000X magnification." figureDoi="http://doi.org/10.5281/zenodo.13704981" httpUri="https://zenodo.org/record/13704981/files/figure.png" pageId="45" pageNumber="46">Fig. 23a–b</figureCitation>
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), sometimes with multiple trichomes in a common sheath (
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<figureCitation id="132D73F76C43FFA9015EFB72FE4AFB67" box="[332,466,1240,1265]" captionStart="FIGURE 23" captionStartId="46.[136,229,1951,1972]" captionTargetBox="[164,1422,422,1923]" captionTargetId="figure-101@46.[164,1423,422,1923]" captionTargetPageId="46" captionText="FIGURE 23.Kaiparowitsiaimplicata.A.Fasicles of trichomeswithout common sheath.B–C.Tightlyentangled filaments forming compact coils. D. Disintegration of trichomes within common sheath occasionally observed. E–F. Nodule formation common. F–H. Distinctively longer than width common cells and crooked, Arthronema-like involution from cells along trichomes. G–I. Multiple trichomes entangled within one common sheath also observed. Scale bar 10μm in 1000X magnification." figureDoi="http://doi.org/10.5281/zenodo.13704981" httpUri="https://zenodo.org/record/13704981/files/figure.png" pageId="45" pageNumber="46">Figs. 23d–f</figureCitation>
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), without false branching, 1.3
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<emphasis id="B962B3606C43FFA90335FB72FCADFB67" bold="true" box="[807,821,1240,1265]" pageId="45" pageNumber="46">–</emphasis>
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1.5
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<emphasis id="B962B3606C43FFA9034AFB72FCFEFB67" bold="true" box="[856,870,1240,1265]" pageId="45" pageNumber="46">–</emphasis>
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(2.3) μm wide. Sheath thin, occasionally expanded (
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<figureCitation id="132D73F76C43FFA90082FB56FF69FA83" box="[144,241,1276,1301]" captionStart="FIGURE 23" captionStartId="46.[136,229,1951,1972]" captionTargetBox="[164,1422,422,1923]" captionTargetId="figure-101@46.[164,1423,422,1923]" captionTargetPageId="46" captionText="FIGURE 23.Kaiparowitsiaimplicata.A.Fasicles of trichomeswithout common sheath.B–C.Tightlyentangled filaments forming compact coils. D. Disintegration of trichomes within common sheath occasionally observed. E–F. Nodule formation common. F–H. Distinctively longer than width common cells and crooked, Arthronema-like involution from cells along trichomes. G–I. Multiple trichomes entangled within one common sheath also observed. Scale bar 10μm in 1000X magnification." figureDoi="http://doi.org/10.5281/zenodo.13704981" httpUri="https://zenodo.org/record/13704981/files/figure.png" pageId="45" pageNumber="46">Fig. 23d</figureCitation>
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), sometimes absent, up to 0.7 μm wide. Trichomes untapered, bent, flexuous, entangled, sometimes forming nodules (
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<figureCitation id="132D73F76C43FFA900FDFA8AFEEAFAAF" box="[239,370,1312,1337]" captionStart="FIGURE 23" captionStartId="46.[136,229,1951,1972]" captionTargetBox="[164,1422,422,1923]" captionTargetId="figure-101@46.[164,1423,422,1923]" captionTargetPageId="46" captionText="FIGURE 23.Kaiparowitsiaimplicata.A.Fasicles of trichomeswithout common sheath.B–C.Tightlyentangled filaments forming compact coils. D. Disintegration of trichomes within common sheath occasionally observed. E–F. Nodule formation common. F–H. Distinctively longer than width common cells and crooked, Arthronema-like involution from cells along trichomes. G–I. Multiple trichomes entangled within one common sheath also observed. Scale bar 10μm in 1000X magnification." figureDoi="http://doi.org/10.5281/zenodo.13704981" httpUri="https://zenodo.org/record/13704981/files/figure.png" pageId="45" pageNumber="46">Figs. 23c–f</figureCitation>
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), with cell division occurring throughout trichome length, not constricted at the indistinct cross-walls, 1.3–1.5 μm wide. Hormogonia and necridia absent. Cells cylindrical, longer than wide, with
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<emphasis id="B962B3606C43FFA904E0FAEEFA1AFACB" box="[1266,1410,1348,1373]" italics="true" pageId="45" pageNumber="46">Arthronema-</emphasis>
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like involution cells with outgrowths (
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<figureCitation id="132D73F76C43FFA90219FAC2FD14FA17" box="[523,652,1384,1409]" captionStart="FIGURE 23" captionStartId="46.[136,229,1951,1972]" captionTargetBox="[164,1422,422,1923]" captionTargetId="figure-101@46.[164,1423,422,1923]" captionTargetPageId="46" captionText="FIGURE 23.Kaiparowitsiaimplicata.A.Fasicles of trichomeswithout common sheath.B–C.Tightlyentangled filaments forming compact coils. D. Disintegration of trichomes within common sheath occasionally observed. E–F. Nodule formation common. F–H. Distinctively longer than width common cells and crooked, Arthronema-like involution from cells along trichomes. G–I. Multiple trichomes entangled within one common sheath also observed. Scale bar 10μm in 1000X magnification." figureDoi="http://doi.org/10.5281/zenodo.13704981" httpUri="https://zenodo.org/record/13704981/files/figure.png" pageId="45" pageNumber="46">
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Figs.
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–i
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</figureCitation>
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at arrows), with homogenous content, typically 3.1–3.7 μm long, but abnormally long cells (as much as 20 μm) commonly encountered. End cells rounded or conically rounded.
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</paragraph>
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<paragraph id="8BA96F726C43FFA900AFFA1AFB3AF953" blockId="45.[136,1452,988,2093]" pageId="45" pageNumber="46">
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D1-D1’ helix 142 nucleotides long, with basal 3’ unilateral bulge of 7 nucleotides (5’-UAUCCCA-3’), with additional large 3’ unilateral bulge at position 100–113; mid-helix with 5–6 internal loops due to adenine and guanine mismatches of 3–5 nucleotides, at positions 15–17/111–112, 29–30/92–93, 35–37/86–87, 41–42/81–82, 45–47/77–78 and 53/70–71; terminal loop having sequence 5’-UUAAUU-3’ (
|
||
<figureCitation id="132D73F76C43FFA90347F9B6FC59F9A3" box="[853,961,1564,1589]" captionStart="FIGURE 6" captionStartId="15.[136,229,1976,1997]" captionTargetBox="[157,1425,273,1857]" captionTargetId="figure-14@15.[151,1436,267,1882]" captionTargetPageId="15" captionText="FIGURE 6. D1-D1’ stems of species described in Oculatellaceae.The stem structures of genera described previously in other publications (Oculatella, Thermoleptolyngbya, Timaviella) or in publications under provision (Trichotorquatus) are not shown here." figureDoi="http://doi.org/10.5281/zenodo.13704935" httpUri="https://zenodo.org/record/13704935/files/figure.png" pageId="45" pageNumber="46">Fig. 6q–r</figureCitation>
|
||
). Box B helix 36 nucleotides long, with one basal internal loop at position 5/31–32, one unpaired adenine at position 9, terminal loop of 4 nucleotides (
|
||
<figureCitation id="132D73F76C43FFA9055BF9EAFA06F9CF" box="[1353,1438,1600,1625]" captionStart="FIGURE 7" captionStartId="17.[136,229,1928,1949]" captionTargetBox="[314,1274,759,1806]" captionTargetId="figure-238@17.[311,1276,751,1831]" captionTargetPageId="17" captionText="FIGURE 7. Box B helices of species described in Oculatellaceae. The structures of genera described previously in other publications (Oculatella, Thermoleptolyngbya, Timaviella) or in publications under provision (Trichotorquatus) are not shown here." figureDoi="http://doi.org/10.5281/zenodo.13704937" httpUri="https://zenodo.org/record/13704937/files/figure.png" pageId="45" pageNumber="46">Fig. 7p</figureCitation>
|
||
). V2 between
|
||
<superScript id="7C63C23A6C43FFA90107F9CEFEE8F9E6" attach="left" box="[277,368,1634,1661]" fontSize="6" pageId="45" pageNumber="46">tRNAAla</superScript>
|
||
and
|
||
<superScript id="7C63C23A6C43FFA901B4F9CEFE62F9E6" attach="left" box="[422,506,1634,1661]" fontSize="6" pageId="45" pageNumber="46">tRNAIle</superScript>
|
||
absent. V3 helix 113 nucleotides long, with a5’-G/A-3’and 5’-A/G-3’ mismatches at positions 5/109 and 42/72, several internal loops at positions 14–18/95–99, 22–25/88–91, 34–37/77–79, two unpaired nucleotides of guanine and adenine at positions 67 and 105 respectively of 3’ strand (
|
||
<figureCitation id="132D73F76C43FFA90450F906FB0DF953" box="[1090,1173,1708,1733]" captionStart="FIGURE 9" captionStartId="19.[136,229,1958,1979]" captionTargetBox="[229,912,769,1871]" captionTargetId="figure-135@19.[151,1436,768,1875]" captionTargetPageId="19" captionText="FIGURE 9. V3 helices of species described in Oculatellaceae. All species described have this structure. The V3 helix of Cartusia aeruginosa is missing because we do not have the full length of its ITS region." figureDoi="http://doi.org/10.5281/zenodo.13704943" httpUri="https://zenodo.org/record/13704943/files/figure.png" pageId="45" pageNumber="46">Fig. 9n</figureCitation>
|
||
).
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C30C3CF96C43FFA900AFF97AFDC1F97F" box="[189,601,1744,1769]" pageId="45" pageNumber="46" type="etymology">
|
||
<paragraph id="8BA96F726C43FFA900AFF97AFDC1F97F" blockId="45.[136,1452,988,2093]" box="[189,601,1744,1769]" pageId="45" pageNumber="46">
|
||
<emphasis id="B962B3606C43FFA900AFF97AFEFCF97F" bold="true" box="[189,356,1744,1769]" pageId="45" pageNumber="46">Etymology:—</emphasis>
|
||
<taxonomicName id="4C1614F16C43FFA90176F97AFE56F97F" authorityName="Mai, Johansen et Bohunicka" authorityYear="2018" box="[356,462,1744,1769]" class="Cyanobacteriia" family="Oculatellaceae" genus="Kaiparowitsia" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="45" pageNumber="46" phylum="Cyanobacteria" rank="species" species="implicata">
|
||
<emphasis id="B962B3606C43FFA90176F97AFE56F97F" box="[356,462,1744,1769]" italics="true" pageId="45" pageNumber="46">implicata</emphasis>
|
||
</taxonomicName>
|
||
(L): tangled
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C30C3CF96C43FFAA00AFF95EFEF4FE07" lastPageId="46" lastPageNumber="47" pageId="45" pageNumber="46" type="materials_examined">
|
||
<paragraph id="8BA96F726C43FFA900AFF95EFEC6F80B" blockId="45.[136,1452,988,2093]" pageId="45" pageNumber="46">
|
||
<emphasis id="B962B3606C43FFA900AFF95EFEE7F89B" bold="true" box="[189,383,1780,1805]" pageId="45" pageNumber="46">Type locality:—</emphasis>
|
||
<collectingCountry id="F3012FE26C43FFA9016DF95EFE23F89B" box="[383,443,1780,1805]" name="United States of America" pageId="45" pageNumber="46">USA</collectingCountry>
|
||
.
|
||
<collectingRegion id="49D2A1906C43FFA901DBF95EFD9CF89B" box="[457,516,1780,1805]" country="United States of America" name="Utah" pageId="45" pageNumber="46">Utah</collectingRegion>
|
||
: Camp Spring Site 1, Grand Staircase-Escalante National Monument (
|
||
<collectionCode id="ED07F7B76C43FFA9052AF95EFA38F89B" box="[1336,1440,1780,1805]" pageId="45" pageNumber="46">GSENM</collectionCode>
|
||
),
|
||
<geoCoordinate id="EE2209B56C43FFA9009AF8B2FEB0F8A7" box="[136,296,1816,1841]" degrees="37" direction="north" minutes="32" orientation="latitude" pageId="45" pageNumber="46" precision="15" seconds="35" value="37.543056">37°32’35” N-</geoCoordinate>
|
||
<geoCoordinate id="EE2209B56C43FFA9013BF8B2FE54F8A7" box="[297,460,1816,1841]" degrees="111" direction="west" minutes="38" orientation="longitude" pageId="45" pageNumber="46" precision="15" seconds="26" value="-111.64056">111°38’26” W</geoCoordinate>
|
||
, collected on
|
||
<date id="FFA849B26C43FFA90261F8B2FCB5F8A7" box="[627,813,1816,1841]" pageId="45" pageNumber="46" value="2006-08-15">15 August 2006</date>
|
||
by Markéta Bohunická. Small horizontal seep wall in sandstone of Kaiparowits Plateau formation, colored intensely orange by iron bacteria, in the Grand Staircase-Escalante National Monument (
|
||
<collectionCode id="ED07F7B76C43FFA90165F8CAFE47F8EF" box="[375,479,1888,1913]" pageId="45" pageNumber="46">GSENM</collectionCode>
|
||
), Kane County,
|
||
<collectingRegion id="49D2A1906C43FFA9029DF8CAFD50F8EF" box="[655,712,1888,1913]" country="United States of America" name="Utah" pageId="45" pageNumber="46">Utah</collectingRegion>
|
||
,
|
||
<collectingCountry id="F3012FE26C43FFA902C0F8CAFC96F8EF" box="[722,782,1888,1913]" name="United States of America" pageId="45" pageNumber="46">USA</collectingCountry>
|
||
. Found in wet soil under the overhang with pH 7.7–8.1, with mottled coloration.
|
||
</paragraph>
|
||
<paragraph id="8BA96F726C43FFA900AFF802FE8FF873" blockId="45.[136,1452,988,2093]" pageId="45" pageNumber="46">
|
||
<materialsCitation id="3B7E652F6C43FFA900AFF802FE8FF873" collectionCode="BRY" collectorName="Monte L. Bean Museum" location="Utah" pageId="45" pageNumber="46" specimenCode="BRY37784" specimenCount="1" stateProvince="Utah" typeStatus="holotype">
|
||
<emphasis id="B962B3606C43FFA900AFF802FD8FF857" bold="true" box="[189,535,1960,1985]" pageId="45" pageNumber="46">
|
||
<typeStatus id="54ADD1D06C43FFA900AFF802FEB2F857" box="[189,298,1960,1985]" pageId="45" pageNumber="46" type="holotype">Holotype</typeStatus>
|
||
here designated:—
|
||
</emphasis>
|
||
<specimenCode id="DBB0C7096C43FFA90204F802FD05F857" box="[534,669,1960,1985]" collectionCode="BRY" country="USA" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15673" lsid="urn:lsid:biocol.org:col:15673" name="Brigham Young University - S.L. Welsh Herbarium" pageId="45" pageNumber="46" type="Herbarium">BRY37784</specimenCode>
|
||
!, Herbarium for Nonvascular Cryptogams,
|
||
<collectorName id="26E30AA46C43FFA90499F802FA3FF857" box="[1163,1447,1960,1985]" pageId="45" pageNumber="46">Monte L. Bean Museum</collectorName>
|
||
, Provo,
|
||
<collectingRegion id="49D2A1906C43FFA900CBF866FE8BF873" box="[217,275,1996,2021]" country="United States of America" name="Utah" pageId="45" pageNumber="46">Utah</collectingRegion>
|
||
.
|
||
</materialsCitation>
|
||
</paragraph>
|
||
<paragraph id="8BA96F726C43FFA900AFF85AFE50F7BB" blockId="45.[136,1452,988,2093]" pageId="45" pageNumber="46">
|
||
<emphasis id="B962B3606C43FFA900AFF85AFD93F79F" bold="true" box="[189,523,2032,2057]" pageId="45" pageNumber="46">
|
||
<typeStatus id="54ADD1D06C43FFA900AFF85AFE87F79F" box="[189,287,2032,2057]" pageId="45" pageNumber="46" type="isotype">Isotypes</typeStatus>
|
||
here designated:—
|
||
</emphasis>
|
||
<collectionCode id="ED07F7B76C43FFA90219F85AFDDFF79F" box="[523,583,2032,2057]" country="USA" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15673" lsid="urn:lsid:biocol.org:col:15673" name="Brigham Young University - S.L. Welsh Herbarium" pageId="45" pageNumber="46" type="Herbarium">BRY</collectionCode>
|
||
37785! and
|
||
<collectionCode id="ED07F7B76C43FFA902DFF85AFC91F79F" box="[717,777,2032,2057]" country="USA" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15673" lsid="urn:lsid:biocol.org:col:15673" name="Brigham Young University - S.L. Welsh Herbarium" pageId="45" pageNumber="46" type="Herbarium">BRY</collectionCode>
|
||
37786!, Herbarium for Nonvascular Cryptogams, Monte L. Bean Museum, Provo,
|
||
<collectingRegion id="49D2A1906C43FFA90198F7BEFE5CF7BB" box="[394,452,2068,2093]" country="United States of America" name="Utah" pageId="45" pageNumber="46">Utah</collectingRegion>
|
||
.
|
||
</paragraph>
|
||
<paragraph id="8BA96F726C40FFAA00AFFF0AFB8AFF4B" blockId="46.[136,1452,160,401]" pageId="46" pageNumber="47">
|
||
<emphasis id="B962B3606C40FFAA00AFFF0AFE3EFF2F" bold="true" box="[189,422,160,185]" pageId="46" pageNumber="47">Reference strain:—</emphasis>
|
||
GSE-PSE-MK54-09C, Algal Culture Collection at John Carroll University, Cleveland,
|
||
<collectingCountry id="F3012FE26C40FFAA057EFF0AFA30FF2F" box="[1388,1448,160,185]" name="United States of America" pageId="46" pageNumber="47">USA</collectingCountry>
|
||
. Additional reference strains: GSE-TBC-9
|
||
<collectionCode id="ED07F7B76C40FFAA024AFF6EFDE7FF4B" box="[600,639,196,221]" country="USA" name="Chicago Academy of Sciences" pageId="46" pageNumber="47" type="Museum">CA</collectionCode>
|
||
and GSE-TBC-9
|
||
<collectionCode id="ED07F7B76C40FFAA0356FF6EFCF4FF4B" box="[836,876,196,221]" country="USA" name="Chicago Academy of Sciences" pageId="46" pageNumber="47" type="Museum">CA</collectionCode>
|
||
2, respectively.
|
||
</paragraph>
|
||
<paragraph id="8BA96F726C40FFAA00AFFF42FEF4FE07" blockId="46.[136,1452,160,401]" pageId="46" pageNumber="47">
|
||
<emphasis id="B962B3606C40FFAA00AFFF42FE09FE97" bold="true" box="[189,401,232,257]" pageId="46" pageNumber="47">Taxonomic notes</emphasis>
|
||
:
|
||
<emphasis id="B962B3606C40FFAA018BFF42FE2DFE97" bold="true" box="[409,437,232,257]" pageId="46" pageNumber="47">—</emphasis>
|
||
<taxonomicName id="4C1614F16C40FFAA01A7FF42FD48FE97" authorityName="Mai, Johansen et Bohunicka" authorityYear="2018" box="[437,720,232,257]" class="Cyanobacteriia" family="Oculatellaceae" genus="Kaiparowitsia" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="46" pageNumber="47" phylum="Cyanobacteria" rank="species" species="implicata">
|
||
<emphasis id="B962B3606C40FFAA01A7FF42FD48FE97" box="[437,720,232,257]" italics="true" pageId="46" pageNumber="47">Kaiparowitsia implicata</emphasis>
|
||
</taxonomicName>
|
||
is distinguished from previously described species in the
|
||
<taxonomicName id="4C1614F16C40FFAA009AFEA6FEDFFEB3" box="[136,327,268,293]" class="Cyanobacteriia" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="46" pageNumber="47" phylum="Cyanobacteria" rank="order">Synechococcales</taxonomicName>
|
||
by the characteristic involution cells with outgrowths on the side of the cell. These strange cells are reported only for
|
||
<taxonomicName id="4C1614F16C40FFAA015FFE9AFD82FEDF" box="[333,538,304,329]" class="Cyanophyceae" family="Oscillatoriaceae" genus="Leptolyngbya" kingdom="Bacteria" order="Nostocales" pageId="46" pageNumber="47" phylum="Cyanobacteria" rank="species" species="yellowstonensis">
|
||
<emphasis id="B962B3606C40FFAA015FFE9AFD82FEDF" box="[333,538,304,329]" italics="true" pageId="46" pageNumber="47">L. yellowstonensis</emphasis>
|
||
</taxonomicName>
|
||
and
|
||
<taxonomicName id="4C1614F16C40FFAA0242FE9AFB7DFEDF" authority="Zammit, Billi and Albertano 2012" authorityName="Zammit, Billi and Albertano" authorityYear="2012" box="[592,1253,304,329]" class="Cyanophyceae" family="Leptolyngbyaceae" genus="Oculatella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="46" pageNumber="47" phylum="Cyanobacteria" rank="species" species="subterrannea">
|
||
<emphasis id="B962B3606C40FFAA0242FE9AFCFAFEDF" box="[592,866,304,329]" italics="true" pageId="46" pageNumber="47">Oculatella subterrannea</emphasis>
|
||
<bibRefCitation id="EF8712836C40FFAA037BFE9AFB7DFEDF" author="Zammit, G. & Billi, D. & Albertano, P." box="[873,1253,304,329]" pageId="46" pageNumber="47" pagination="341 - 354" refId="ref38590" refString="Zammit, G., Billi, D. & Albertano, P. (2012) The subaerophytic cyanobacterium Oculatella subterranea (Oscillatoriales, Cyanophyceae) gen. et sp. nov.: a cytomorphological and molecular description. European Journal of Phycology 47: 341 - 354. https: // doi. org / 10.1080 / 09670262.2012.717106" type="journal article" year="2012">Zammit, Billi and Albertano 2012</bibRefCitation>
|
||
</taxonomicName>
|
||
(see
|
||
<bibRefCitation id="EF8712836C40FFAA050DFE9AFEC0FEFB" author="Albertano, P. & Grilli-Caiola, M." pageId="46" pageNumber="47" pagination="55 - 57" refId="ref30623" refString="Albertano, P. & Grilli-Caiola, M. (1988) Structural and ultrastructural characters of a red biodeteriorating Lyngbya sp. in culture. Archiv fur Hydrobiologie, Supplement 80: 55 - 57." type="journal article" year="1988">Albertano & Grilli-Caiola 1988</bibRefCitation>
|
||
and
|
||
<bibRefCitation id="EF8712836C40FFAA0180FEFEFCD7FEFB" author="Komarek, J. & Anagnostidis, K." box="[402,847,340,365]" pageId="46" pageNumber="47" refId="ref34263" refString="Komarek, J. & Anagnostidis, K. (2005) Cyanoprokaryota II. In: Budel, B., Krienitz, L., Gartner, G. & Schagerl, M. (Eds.) Susswasserflora von Mittleuropa 19 / 2. Elsevier / Spektrum, Munchen, 759 pp." type="book" year="2005">Komárek & Anagnostidis (2005: 222))</bibRefCitation>
|
||
. However, these two species are molecularly distinct from
|
||
<taxonomicName id="4C1614F16C40FFAA00D7FED2FEFCFE07" authorityName="Mai, Johansen et Bohunicka" authorityYear="2018" box="[197,356,376,401]" class="Cyanobacteriia" family="Oculatellaceae" genus="Kaiparowitsia" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="46" pageNumber="47" phylum="Cyanobacteria" rank="genus">
|
||
<emphasis id="B962B3606C40FFAA00D7FED2FEFCFE07" box="[197,356,376,401]" italics="true" pageId="46" pageNumber="47">Kaiparowitsia</emphasis>
|
||
</taxonomicName>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |