treatments-xml/data/03/89/87/0389878AFFA42158DA0BFDBFFA886185.xml
2024-06-21 12:22:17 +02:00

215 lines
18 KiB
XML
Raw Blame History

This file contains ambiguous Unicode characters

This file contains Unicode characters that might be confused with other characters. If you think that this is intentional, you can safely ignore this warning. Use the Escape button to reveal them.

<document id="FEE9C7E33FEEEAE9B929B6235ACD998F" ID-DOI="10.1099/ijsem.0.004107" ID-ISSN="1466-5034" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.taxonomicNames_approvedBy="felipe" checkinTime="1644597203828" checkinUser="felipe" docAuthor="Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, OToole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G. &amp; Lebeer, Sarah" docDate="2020" docId="0389878AFFA42158DA0BFDBFFA886185" docLanguage="en" docName="IntJSystEvolMicrobiol.70.4.2782-2858.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 70 (4)" docSource="http://dx.doi.org/10.1099/ijsem.0.004107" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Ligilactobacillus faecis Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, OToole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle &amp; Lebeer, 2020, COMB. NOV." docType="treatment" docVersion="4" lastPageNumber="2823" masterDocId="FFB0FFF2FF8D2171D937FF96FFAF6267" masterDocTitle="A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae" masterLastPageNumber="2858" masterPageNumber="2782" pageNumber="2823" updateTime="1699295455673" updateUser="plazi">
<mods:mods id="18FAC9971E9A6C56580F121358217C5E" xmlns:mods="http://www.loc.gov/mods/v3">
<mods:titleInfo id="B2FE1AFE7DB5C6AAE7BAD70FAE7022C4">
<mods:title id="0E9A55B4F51AB9CF5ADB1A9FB8F04E00">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
</mods:titleInfo>
<mods:name id="5D97871BE5BC921B811815F88BB44032" type="personal">
<mods:role id="40177ECA358F19C9E75DC9C66D7D80D8">
<mods:roleTerm id="A664237057919C082793DC38A68DA0B0">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="90698CFEBEC4C5107FCC43B49E6AD50B">Zheng, Jinshui</mods:namePart>
</mods:name>
<mods:name id="A315E43623286DE5AB5665F8CEC979D7" type="personal">
<mods:role id="922731001010CDB42256D0A2E60E68F5">
<mods:roleTerm id="EB2452100B5A1DEB16BD955390109C9B">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="E48451C3455E7985BFD2A0EBC01CC1CA">Wittouck, Stijn</mods:namePart>
</mods:name>
<mods:name id="72422D4A29ADA328C7991A96035F372C" type="personal">
<mods:role id="076FEC7E58EC68FFF7CEF4AB573673E0">
<mods:roleTerm id="1A6A99EC8C5B9087964E5E8A3B07F8F8">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="B7D9440AA3DD8FA63B06B3FC399CBFBA">Salvetti, Elisa</mods:namePart>
</mods:name>
<mods:name id="2E96B198A79BDBC84BDFDBD4F2378DEC" type="personal">
<mods:role id="2519DC91D68142DCB539C4BCBDCAB8B9">
<mods:roleTerm id="371B9849F338956BE7D7D4716904A5E9">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="907B008DE16CE4259F6CAAF0202CCA91">Franz, Charles M. A. P.</mods:namePart>
</mods:name>
<mods:name id="D8A470DE4D62B6967718903995F5FD66" type="personal">
<mods:role id="27F0CC25884BEBE8DB8640B9A2C5B260">
<mods:roleTerm id="AED8CE7AFBC669E67C8B918216151C4D">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="2CE1FBD29780599AFA5992DA37EA408A">Harris, Hugh M. B.</mods:namePart>
</mods:name>
<mods:name id="539C7FB963EC743D2CBF6CCE848CC008" type="personal">
<mods:role id="B828FB62F57CCE600D072ED180F6783D">
<mods:roleTerm id="0402D0B9D3D6A277FD5B309322B225C3">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="AC2AF24708E9D72BE2D26F8F2A06E1AF">Mattarelli, Paola</mods:namePart>
</mods:name>
<mods:name id="93D0A0F9F3E8612749848A15F9B4A9E7" type="personal">
<mods:role id="A61ACA412C892B41944D95B3EBB8240D">
<mods:roleTerm id="A0B9EA06BB0CE3310C1B1452DEB171BC">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="FF5B6D5929E6E43A7CEFB867BBF03C22">OToole, Paul W.</mods:namePart>
</mods:name>
<mods:name id="36309401FE217C6CF0E97E06025E144E" type="personal">
<mods:role id="300AB82DF3BDF477040FDBC9F69FE4AB">
<mods:roleTerm id="52E1B4FAF3AC15293DA573BFF535777D">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="23A8DD9419336108D63EB9EE878D0568">Pot, Bruno</mods:namePart>
</mods:name>
<mods:name id="00D1981A44CCDBB853E77B09491F5644" type="personal">
<mods:role id="50E93896AACC0408700B0B725E2B3DD8">
<mods:roleTerm id="F11F29A6847298DECCF82BA739A62531">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="A5AEC9B58A21DC681B245CA4B466E0B1">Vandamme, Peter</mods:namePart>
</mods:name>
<mods:name id="CC6DA4D325DE4C39708D73EC03AB4A16" type="personal">
<mods:role id="9815DC8F5D64303ABEE5BC3DF17EF506">
<mods:roleTerm id="A8E4A06D4B60F5A4875DD51BD59DDBEB">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="EDBB92CB9FA10661253FD0B531DF1225">Walter, Jens</mods:namePart>
</mods:name>
<mods:name id="56E6D756065BB0844AA5C4E2813D5FE2" type="personal">
<mods:role id="0A1A516686C1BCC0950C2123BD062B24">
<mods:roleTerm id="756349D9E190860E7187A0EC57D938B6">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="D50E4D4CB85BBFDBE2C79EB5F2629F2B">Watanabe, Koichi</mods:namePart>
</mods:name>
<mods:name id="7EC894C9CEA99B821D54E17BDA13BD23" type="personal">
<mods:role id="8A7AB443063CA8E5589DBBBE76392366">
<mods:roleTerm id="3F9E9B7DD00AA157A5B57826242E2A9E">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="04182F32ABBF474B16F29D56A7975BB7">Wuyts, Sander</mods:namePart>
</mods:name>
<mods:name id="67C8E19EF7E3A85C05BD879D3FD8E937" type="personal">
<mods:role id="4E67BAB8C4E05AB0CE403489A83D3710">
<mods:roleTerm id="276231C7958FC1CEEAD6E189C47DD5B7">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="99C01315F817025BF3574C257F93648E">Felis, Giovanna E.</mods:namePart>
</mods:name>
<mods:name id="084B6DF7AA290F61A6A1F77E6F1B86EB" type="personal">
<mods:role id="D88B30678BF82717CF0ED81321A2763D">
<mods:roleTerm id="754AA6DFFD72283E84A92C019A9FC329">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="9BA29042619664920A4B1345630C8696">Gänzle, Michael G.</mods:namePart>
</mods:name>
<mods:name id="9FE3D6FA6BF3F7F24506B0A1C1BF9B05" type="personal">
<mods:role id="FDC849928CA637219775393D230F75AE">
<mods:roleTerm id="B5C1DE8047667C57BCDF5E24735DDE3B">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="AF5527D9826E73041A48E8243488131D">Lebeer, Sarah</mods:namePart>
</mods:name>
<mods:typeOfResource id="96D59D2CE263076BDDD233CB626DDFCF">text</mods:typeOfResource>
<mods:relatedItem id="72F84ABC18714A152F127875CEF7C992" type="host">
<mods:titleInfo id="7D0646D1A050EA1DA53E6AA87A5EBE5D">
<mods:title id="9CA906E4CBE264F4324DD73C9091A122">International Journal of Systematic and Evolutionary Microbiology</mods:title>
</mods:titleInfo>
<mods:part id="46994FCC2297AD10B4734A032106A5A0">
<mods:date id="63B3053C0ADAD49F699EAFEC5A4AAD4C">2020</mods:date>
<mods:detail id="542C8E406C1D3C4D92C429DF0F19BE2D" type="pubDate">
<mods:number id="18EDDD737855E185AF3FF2C68EE93BA3">2020-04-01</mods:number>
</mods:detail>
<mods:detail id="2B5D6D2D13FDAAF1DA7F50866816C064" type="volume">
<mods:number id="920EA8E063ECFD0200C504D57E245843">70</mods:number>
</mods:detail>
<mods:detail id="4F194E5AE08D73C7D1C69832FACA5F8A" type="issue">
<mods:number id="5B2D4AB4EE5C5A60924E267B04B77CE3">4</mods:number>
</mods:detail>
<mods:extent id="FE85780F63A05BDA305309C6D3450229" unit="page">
<mods:start id="7F5E6A7F93CCF43B4710DD99AA857FAA">2782</mods:start>
<mods:end id="CB912BA9710D5BFC1314D99A87617C95">2858</mods:end>
</mods:extent>
</mods:part>
</mods:relatedItem>
<mods:location id="F9775E0E14D50361B0537046C7BD16B4">
<mods:url id="3A30C1FB887E363C5EB97360E6C8C2A9">http://dx.doi.org/10.1099/ijsem.0.004107</mods:url>
</mods:location>
<mods:classification id="1DF97F96F7522C2BF3C4BD1879FE8547">journal article</mods:classification>
<mods:identifier id="D92FEA8A8B829C56121B8218F778C5C0" type="DOI">10.1099/ijsem.0.004107</mods:identifier>
<mods:identifier id="8F1BAD3C17F2E73D3A37FE06728847C4" type="ISSN">1466-5034</mods:identifier>
</mods:mods>
<treatment id="0389878AFFA42158DA0BFDBFFA886185" ID-DOI="http://doi.org/10.5281/zenodo.6309857" ID-Zenodo-Dep="6309857" LSID="urn:lsid:plazi:treatment:0389878AFFA42158DA0BFDBFFA886185" httpUri="http://treatment.plazi.org/id/0389878AFFA42158DA0BFDBFFA886185" lastPageNumber="2823" pageId="41" pageNumber="2823">
<subSubSection id="C33A6517FFA42158DA0BFDBFFC4E600C" pageId="41" pageNumber="2823" type="nomenclature">
<paragraph id="8B9F369CFFA42158DA0BFDBFFC4E600C" blockId="41.[828,1467,553,995]" pageId="41" pageNumber="2823">
<heading id="D0D781F0FFA42158DA0BFDBFFC4E600C" allCaps="true" bold="true" centered="true" fontSize="12" level="2" pageId="41" pageNumber="2823" reason="3">
<emphasis id="B954EA8EFFA42158DA0BFDBFFC4E600C" bold="true" pageId="41" pageNumber="2823">
DESCRIPTION OF
<taxonomicName id="4C204D1FFFA42158DD02FDBFFA176021" authorityName="Zheng &amp; Wittouck &amp; Salvetti &amp; Franz &amp; Harris &amp; Mattarelli &amp; OToole &amp; Pot &amp; Vandamme &amp; Walter &amp; Watanabe &amp; Wuyts &amp; Felis &amp; Gänzle &amp; Lebeer" authorityYear="2020" baseAuthorityName="Zheng &amp; Wittouck &amp; Salvetti &amp; Franz &amp; Harris &amp; Mattarelli &amp; OToole &amp; Pot &amp; Vandamme &amp; Walter &amp; Watanabe &amp; Wuyts &amp; Felis &amp; Gänzle &amp; Lebeer" baseAuthorityYear="2020" box="[1077,1464,553,582]" class="Bacilli" family="Lactobacillaceae" genus="Ligilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="41" pageNumber="2823" phylum="Firmicutes" rank="species" species="faecis" status="comb. nov.">
<emphasis id="B954EA8EFFA42158DD02FDBFFA176021" bold="true" box="[1077,1464,553,582]" italics="true" pageId="41" pageNumber="2823">LIGILACTOBACILLUS FAECIS</emphasis>
</taxonomicName>
<taxonomicNameLabel id="A26757F5FFA42158DA0BFDD8FC4E600C" box="[828,993,590,619]" pageId="41" pageNumber="2823" rank="species">COMB. NOV.</taxonomicNameLabel>
</emphasis>
</heading>
</paragraph>
</subSubSection>
<subSubSection id="C33A6517FFA42158DA0BFDEEFA2460F7" box="[828,1419,632,657]" pageId="41" pageNumber="2823" type="etymology">
<paragraph id="8B9F369CFFA42158DA0BFDEEFA2460F7" blockId="41.[828,1467,553,995]" box="[828,1419,632,657]" pageId="41" pageNumber="2823">
<taxonomicName id="4C204D1FFFA42158DA0BFDEEFB8C60F7" authorityName="Zheng &amp; Wittouck &amp; Salvetti &amp; Franz &amp; Harris &amp; Mattarelli &amp; OToole &amp; Pot &amp; Vandamme &amp; Walter &amp; Watanabe &amp; Wuyts &amp; Felis &amp; Gänzle &amp; Lebeer" authorityYear="2020" baseAuthorityName="Zheng &amp; Wittouck &amp; Salvetti &amp; Franz &amp; Harris &amp; Mattarelli &amp; OToole &amp; Pot &amp; Vandamme &amp; Walter &amp; Watanabe &amp; Wuyts &amp; Felis &amp; Gänzle &amp; Lebeer" baseAuthorityYear="2020" box="[828,1059,632,656]" class="Bacilli" family="Lactobacillaceae" genus="Ligilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="41" pageNumber="2823" phylum="Firmicutes" rank="species" species="faecis">
<emphasis id="B954EA8EFFA42158DA0BFDEEFB8C60F7" box="[828,1059,632,656]" italics="true" pageId="41" pageNumber="2823">Ligilactobacillus faecis</emphasis>
</taxonomicName>
(faecis. L. gen. n.
<taxonomicName id="4C204D1FFFA42158DDD5FDEEFAB460F7" authorityName="Zheng &amp; Wittouck &amp; Salvetti &amp; Franz &amp; Harris &amp; Mattarelli &amp; OToole &amp; Pot &amp; Vandamme &amp; Walter &amp; Watanabe &amp; Wuyts &amp; Felis &amp; Gänzle &amp; Lebeer" authorityYear="2020" baseAuthorityName="Zheng &amp; Wittouck &amp; Salvetti &amp; Franz &amp; Harris &amp; Mattarelli &amp; OToole &amp; Pot &amp; Vandamme &amp; Walter &amp; Watanabe &amp; Wuyts &amp; Felis &amp; Gänzle &amp; Lebeer" baseAuthorityYear="2020" box="[1250,1307,632,656]" class="Bacilli" family="Lactobacillaceae" genus="Ligilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="41" pageNumber="2823" phylum="Firmicutes" rank="species" species="faecis">
<emphasis id="B954EA8EFFA42158DDD5FDEEFAB460F7" box="[1250,1307,632,656]" italics="true" pageId="41" pageNumber="2823">faecis</emphasis>
</taxonomicName>
of faeces).
</paragraph>
</subSubSection>
<subSubSection id="C33A6517FFA42158DA0BFD31FBFF613F" pageId="41" pageNumber="2823" type="description">
<paragraph id="8B9F369CFFA42158DA0BFD31FAD460D9" blockId="41.[828,1467,553,995]" box="[828,1403,677,703]" pageId="41" pageNumber="2823">
Basonym:
<taxonomicName id="4C204D1FFFA42158DA9CFD30FA8A60D9" authority="Endo et al. 2013" authorityName="Endo" authorityYear="2013" box="[939,1317,678,702]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="41" pageNumber="2823" phylum="Firmicutes" rank="species" species="faecis">
<emphasis id="B954EA8EFFA42158DA9CFD30FBDC60D9" box="[939,1139,678,702]" italics="true" pageId="41" pageNumber="2823">Lactobacillus faecis</emphasis>
Endo
<emphasis id="B954EA8EFFA42158DD8FFD31FB4460D9" box="[1208,1259,678,702]" italics="true" pageId="41" pageNumber="2823">et al.</emphasis>
2013
</taxonomicName>
, 4505
<superScript id="7C559BD4FFA42158DC54FD33FADA60D4" attach="none" box="[1379,1397,677,691]" fontSize="6" pageId="41" pageNumber="2823">VP</superScript>
.
</paragraph>
<paragraph id="8B9F369CFFA42158DA0BFD42FB1B616C" blockId="41.[828,1467,553,995]" pageId="41" pageNumber="2823">
Original characteristics of the species described in [
<bibRefCitation id="EFB14B6DFFA42158DC61FD42FA2B608B" author="Endo A &amp; Irisawa T &amp; Futagawa-Endo Y &amp; Salminen S &amp; Ohkuma M" box="[1366,1412,724,748]" pageId="41" pageNumber="2823" pagination="4502 - 4507" refId="ref69482" refString="220. Endo A, Irisawa T, Futagawa-Endo Y, Salminen S, Ohkuma M et al. Lactobacillus faecis sp. nov., isolated from animal faeces. Int J Syst Evol Microbiol 2013; 63: 4502 - 4507." type="journal article" year="2013">220</bibRefCitation>
]. The mol% G+C content of DNA is 41.1.
</paragraph>
<paragraph id="8B9F369CFFA42158DA0BFCB7FBFF613F" blockId="41.[828,1467,553,995]" pageId="41" pageNumber="2823">
Isolated from faeces of a jackal (
<taxonomicName id="4C204D1FFFA42158DD88FCB4FAD4615E" authorityName="Schreber" authorityYear="1775" box="[1215,1403,801,825]" class="Bacilli" family="Lactobacillaceae" genus="Canis" kingdom="Bacteria" order="Lactobacillales" pageId="41" pageNumber="2823" phylum="Firmicutes" rank="species" species="mesomelas">
<emphasis id="B954EA8EFFA42158DD88FCB4FAD4615E" box="[1215,1403,801,825]" italics="true" pageId="41" pageNumber="2823">Canis mesomelas</emphasis>
</taxonomicName>
) and raccoons (
<emphasis id="B954EA8EFFA42158DA9DFCD7FBEF613F" box="[938,1088,832,856]" italics="true" pageId="41" pageNumber="2823">Procyron lotor</emphasis>
).
</paragraph>
</subSubSection>
<subSubSection id="C33A6517FFA42158DA0BFCF8FA0A61E1" box="[828,1445,877,903]" pageId="41" pageNumber="2823" type="materials_examined">
<paragraph id="8B9F369CFFA42158DA0BFCF8FA0A61E1" blockId="41.[828,1467,553,995]" box="[828,1445,877,903]" pageId="41" pageNumber="2823">
<materialsCitation id="3B483CC1FFA42158DA0BFCF8FA30611C" accessionNumber="JCM 17300, DSM 23956" box="[828,1439,877,903]" collectionCode="T, JCM, DSM" pageId="41" pageNumber="2823" specimenCount="1" typeStatus="holotype">
The
<typeStatus id="549B883EFFA42158DA5DFCF9FC3761E0" box="[874,920,879,903]" pageId="41" pageNumber="2823">type</typeStatus>
strain is AFL13-2
<superScript id="7C559BD4FFA42158DD61FCFBFBCF611C" attach="left" box="[1110,1120,877,891]" fontSize="6" pageId="41" pageNumber="2823">
<collectionCode id="ED31AE59FFA42158DD61FCFBFBCF611C" box="[1110,1120,877,891]" name="Tavera, Department of Geology and Geophysics" pageId="41" pageNumber="2823">T</collectionCode>
</superScript>
=
<collectionCode id="ED31AE59FFA42158DD4BFCF8FB0161E1" box="[1148,1198,878,902]" country="Japan" httpUri="http://grbio.org/cool/iyky-md37" name="Japan Collection of Microorganisms" pageId="41" pageNumber="2823">JCM</collectionCode>
17300
<superScript id="7C559BD4FFA42158DDC3FCFBFB51611C" attach="left" box="[1268,1278,877,891]" fontSize="6" pageId="41" pageNumber="2823">
<collectionCode id="ED31AE59FFA42158DDC3FCFBFB51611C" box="[1268,1278,877,891]" name="Tavera, Department of Geology and Geophysics" pageId="41" pageNumber="2823">T</collectionCode>
</superScript>
=
<collectionCode id="ED31AE59FFA42158DC2EFCF8FAFE61E1" box="[1305,1361,878,902]" country="Germany" httpUri="http://grbio.org/cool/4644-42cg" name="Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH" pageId="41" pageNumber="2823">DSM</collectionCode>
23956
<superScript id="7C559BD4FFA42158DCA0FCFBFA30611C" attach="none" box="[1431,1439,877,891]" fontSize="6" pageId="41" pageNumber="2823">
<collectionCode id="ED31AE59FFA42158DCA0FCFBFA30611C" box="[1431,1439,877,891]" name="Tavera, Department of Geology and Geophysics" pageId="41" pageNumber="2823">T</collectionCode>
</superScript>
</materialsCitation>
.
</paragraph>
</subSubSection>
<subSubSection id="C33A6517FFA42158DA0BFC0AFA1561D3" box="[828,1466,924,948]" pageId="41" pageNumber="2823" type="description">
<paragraph id="8B9F369CFFA42158DA0BFC0AFA1561D3" blockId="41.[828,1467,553,995]" box="[828,1466,924,948]" pageId="41" pageNumber="2823">Genome accession number:not available at time of publication</paragraph>
</subSubSection>
<subSubSection id="C33A6517FFA42158DA0BFC5CFA886185" box="[828,1319,970,995]" pageId="41" pageNumber="2823" type="materials_examined">
<paragraph id="8B9F369CFFA42158DA0BFC5CFA886185" blockId="41.[828,1467,553,995]" box="[828,1319,970,995]" pageId="41" pageNumber="2823">
16S rRNA gene accession number:
<accessionNumber id="9473AB7FFFA42158DD86FC5CFA8C6185" box="[1201,1315,970,994]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/AB812750" pageId="41" pageNumber="2823">AB812750</accessionNumber>
.
</paragraph>
</subSubSection>
</treatment>
</document>