268 lines
14 KiB
XML
268 lines
14 KiB
XML
<document ID-DOI="10.1038/s41467-019-08438-0" ID-GBIF-Dataset="c1ebfd12-0ea2-4062-9463-99c646f80485" ID-PMC="PMC6355912" ID-PubMed="30705269" ID-Zenodo-Dep="2554790" checkinTime="1549543447453" checkinUser="plazi" docAuthor="Chevrette, Marc G., Carlson, Caitlin M., Ortega, Humberto E., Thomas, Chris, Ananiev, Gene E., Barns, Kenneth J., Book, Adam J., Cagnazzo, Julian, Carlos, Camila, Flanigan, Will, Grubbs, Kirk J., Horn, Heidi A., Hoffmann, Michael, Klassen, Jonathan L., Knack, Jennifer J., Lewin, Gina R., McDonald, Bradon R., Mulle, Laura, Melo, Weilan G. P., Pinto-Tomás, Adrián A., Schmitz, Amber, Wendt-Pienkowski, Evelyn, Wildman, Scott, Zhao, Miao, Zhang, Fan, Bugni, Tim S., Andes, David R., Pupo, Monica T. & Currie, Cameron R." docDate="2019" docId="03F987928955FFEBFC51C6D8FD28FB0B" docLanguage="en" docName="nature_s41467-019-08438-0.pdf" docOrigin="Nature Communications 10 (516)" docStyle="DocumentStyle{}" docTitle="Data Walker 1862" docType="treatment" docVersion="5" lastPageNumber="10" masterDocId="FFC0FFEA895CFFE2FC25C548FFACFFD0" masterDocTitle="The antimicrobial potential from insect microbiomes of Streptomyces" masterLastPageNumber="11" masterPageNumber="1" originalUpdateDomain="Boston" originalUpdateTime="1549005664000" originalUpdateUser="plazi" pageNumber="10" updateTime="1668137207571" updateUser="ExternalLinkService">
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<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo>
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<mods:title>The antimicrobial potential from insect microbiomes of Streptomyces</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Chevrette, Marc G.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Carlson, Caitlin M.</mods:namePart>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Ortega, Humberto E.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Thomas, Chris</mods:namePart>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Ananiev, Gene E.</mods:namePart>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Barns, Kenneth J.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Book, Adam J.</mods:namePart>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Cagnazzo, Julian</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Carlos, Camila</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Flanigan, Will</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Grubbs, Kirk J.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Horn, Heidi A.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Hoffmann, Michael</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Klassen, Jonathan L.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Knack, Jennifer J.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Lewin, Gina R.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>McDonald, Bradon R.</mods:namePart>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Mulle, Laura</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Melo, Weilan G. P.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Pinto-Tomás, Adrián A.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Schmitz, Amber</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Wendt-Pienkowski, Evelyn</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Wildman, Scott</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Zhao, Miao</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Zhang, Fan</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Bugni, Tim S.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Andes, David R.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Pupo, Monica T.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Currie, Cameron R.</mods:namePart>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:relatedItem type="host">
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<mods:titleInfo>
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<mods:title>Nature Communications</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2019</mods:date>
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<mods:detail type="volume">
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<mods:number>10</mods:number>
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</mods:detail>
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<mods:detail type="issue">
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<mods:number>516</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>1</mods:start>
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<mods:end>11</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">10.1038/s41467-019-08438-0</mods:identifier>
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<mods:identifier type="GBIF-Dataset">c1ebfd12-0ea2-4062-9463-99c646f80485</mods:identifier>
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<mods:identifier type="PMC">PMC6355912</mods:identifier>
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<mods:identifier type="PubMed">30705269</mods:identifier>
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<mods:identifier type="Zenodo-Dep">2554790</mods:identifier>
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</mods:mods>
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<treatment ID-DOI="http://doi.org/10.5281/zenodo.5945287" ID-GBIF-Taxon="152409655" ID-Zenodo-Dep="5945287" LSID="urn:lsid:plazi:treatment:03F987928955FFEBFC51C6D8FD28FB0B" httpUri="http://treatment.plazi.org/id/03F987928955FFEBFC51C6D8FD28FB0B" lastPageNumber="10" pageId="9" pageNumber="10">
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<subSubSection pageId="9" pageNumber="10" type="nomenclature">
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<paragraph blockId="9.[116,778,912,1183]" box="[116,294,912,935]" pageId="9" pageNumber="10">
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<heading bold="true" box="[116,294,912,935]" fontSize="9" level="2" pageId="9" pageNumber="10" reason="0">
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<emphasis bold="true" box="[116,294,912,935]" pageId="9" pageNumber="10">
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<taxonomicName authorityName="Walker" authorityYear="1862" box="[116,168,912,935]" class="Insecta" family="Noctuidae" genus="Data" higherTaxonomySource="GBIF" kingdom="Animalia" order="Lepidoptera" pageId="9" pageNumber="10" phylum="Arthropoda" rank="genus">Data</taxonomicName>
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availability
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</emphasis>
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</heading>
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</paragraph>
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<paragraph blockId="9.[116,778,912,1183]" pageId="9" pageNumber="10">
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Genomic
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<taxonomicName authorityName="Walker" authorityYear="1862" box="[196,230,940,957]" class="Insecta" family="Noctuidae" genus="Data" higherTaxonomySource="GBIF" kingdom="Animalia" order="Lepidoptera" pageId="9" pageNumber="11" phylum="Arthropoda" rank="genus">data</taxonomicName>
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can be found at DOI: 10.5281/zenodo.2436565. All other
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<taxonomicName authorityName="Walker" authorityYear="1862" box="[705,739,940,957]" class="Insecta" family="Noctuidae" genus="Data" higherTaxonomySource="GBIF" kingdom="Animalia" order="Lepidoptera" pageId="9" pageNumber="11" phylum="Arthropoda" rank="genus">data</taxonomicName>
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are available in the main text or the supplementary materials; Permits for collections and accessing genetic resources in
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<collectingCountry box="[399,445,985,1002]" name="Brazil" pageId="9" pageNumber="10">Brazil</collectingCountry>
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were issued by SISBIO #46555
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<emphasis box="[700,710,985,1001]" italics="true" pageId="9" pageNumber="10">–</emphasis>
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5 and CNPq #
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<date box="[182,240,1008,1025]" pageId="9" pageNumber="10" value="36-01-09">010936</date>
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/2014
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<emphasis box="[284,294,1008,1024]" italics="true" pageId="9" pageNumber="10">–</emphasis>
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9. Costa Rican collecting permits were issued by the Comisión Institucional de Biodiversidad (Institutional Biodiversity Committee, University of
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<collectingCountry box="[198,285,1053,1070]" name="Costa Rica" pageId="9" pageNumber="10">Costa Rica</collectingCountry>
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; Resolutions # 0 12 and 020; Material Transfer Agreement
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<collectionCode box="[116,160,1076,1093]" country="Turkey" httpUri="http://grbio.org/cool/t3mt-752q" name="Maden Tetkik ve Arama Enstituesue" pageId="9" pageNumber="10">MTA</collectionCode>
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<collectionCode box="[166,192,1075,1092]" pageId="9" pageNumber="10">VI-</collectionCode>
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4307
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<emphasis box="[232,242,1076,1092]" italics="true" pageId="9" pageNumber="10">–</emphasis>
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2013) and authorized by La Selva Biological Station and Las Brisas Nature Reserve.
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<collectionCode box="[247,261,1098,1115]" country="USA" lsid="urn:lsid:biocol.org:col:15406" name="Harvard University - Arnold Arboretum" pageId="9" pageNumber="10">A</collectionCode>
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modified version of the southern pine beetle (
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<figureCitation box="[629,675,1098,1115]" captionStart="Fig. 1" captionStartId="1.[116,146,1894,1914]" captionTargetBox="[231,1356,883,1870]" captionTargetId="figure@1.[249,1354,883,1871]" captionTargetPageId="1" captionText="Fig. 1 Sampling strategy for Streptomyces from insect microbiomes. Streptomyces were isolated from a wide range of insects and geographies (1445 insects; 10,178 strains; dot size, insects sampled). Streptomyces production of the antifungal mycangimycin (1) in the Southern Pine Beetle system is shown at right. Cyphomycin (2) is a new antifungal described herein. Photo credits: southern pine beetle - Erich G. Vallery; fungus-growing ant – Alexander Wild" httpUri="https://zenodo.org/record/2554792/files/figure.png" pageId="9" pageNumber="10">Fig. 1</figureCitation>
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) photo from Erich
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<collectionCode box="[165,181,1121,1138]" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" pageId="9" pageNumber="10">G</collectionCode>
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. Vallery is used under the Creative Commons Attribution 3.0 License. Photos of
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<taxonomicName authorityName="Mayr" authorityYear="1862" box="[200,315,1143,1160]" class="Insecta" family="Formicidae" genus="Cyphomyrmex" higherTaxonomySource="GBIF" kingdom="Animalia" order="Hymenoptera" pageId="9" pageNumber="10" phylum="Arthropoda" rank="genus">
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<emphasis box="[200,315,1143,1160]" italics="true" pageId="9" pageNumber="10">Cyphomyrmex</emphasis>
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</taxonomicName>
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(
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<figureCitation box="[327,382,1143,1160]" captionStart="Fig. 1" captionStartId="1.[116,146,1894,1914]" captionTargetBox="[231,1356,883,1870]" captionTargetId="figure@1.[249,1354,883,1871]" captionTargetPageId="1" captionText="Fig. 1 Sampling strategy for Streptomyces from insect microbiomes. Streptomyces were isolated from a wide range of insects and geographies (1445 insects; 10,178 strains; dot size, insects sampled). Streptomyces production of the antifungal mycangimycin (1) in the Southern Pine Beetle system is shown at right. Cyphomycin (2) is a new antifungal described herein. Photo credits: southern pine beetle - Erich G. Vallery; fungus-growing ant – Alexander Wild" httpUri="https://zenodo.org/record/2554792/files/figure.png" pageId="9" pageNumber="10">Figs. 1</figureCitation>
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and
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<figureCitation box="[424,434,1143,1160]" captionStart="Fig. 5" captionStartId="5.[116,146,1261,1281]" captionTargetBox="[312,1273,140,1239]" captionTargetId="graphics@5.[334,852,641,813]" captionTargetPageId="5" captionText="Fig. 5 Insect-associated Streptomyces are a source of active antimicrobials. a Fractionated extracts from insect microbiomes are active in multiple murine models of drug-resistant infection. Less infective burden is seen in intraperitoneally treated mice after 8 h of infection. Each dot represents a unique fraction in one mouse study. (n = 15, 11, and 8 for C. albicans, E. coli, and P. aeruginosa models, respectively; center, median; box, upper and lower quantiles; whiskers, 1.5× interquartile range. b Most fractions from insect microbiomes show no hemolysis in cell-based assays. Safe indicates no toxicity at>100× concentration associated with efficacy. c The antifungal cyphomycin is produced by Streptomyces isolated from d the fungus-growing ant Cyphomyrmex sp. Photo credit: Alexander Wild e Cyphomycin-containing fractions show potency against the ant pathogen Escovopsis sp. (top left, bottom). f Purified cyphomycin exhibits potency against resistant pathogens. g Mouse candidiasis (C. albicans) models showcase reduced infection and a dose-like response to cyphomycin. Dots indicate individual mice" httpUri="https://zenodo.org/record/2554800/files/figure.png" pageId="9" pageNumber="10">5</figureCitation>
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) are used under a perpetual commercial license from Alexander Wild.
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</paragraph>
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||
</subSubSection>
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<subSubSection box="[116,644,1222,1244]" pageId="9" pageNumber="10" type="description">
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||
<paragraph blockId="9.[116,644,1222,1244]" box="[116,644,1222,1244]" pageId="9" pageNumber="10">
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||
Received:
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<date box="[214,376,1222,1244]" pageId="9" pageNumber="10" value="2018-10-18">
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18 October
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||
<date box="[330,376,1222,1243]" pageId="9" pageNumber="10" value="2018" year="2018">2018</date>
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||
</date>
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||
Accepted:
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||
<date box="[485,644,1222,1244]" pageId="9" pageNumber="10" value="2019-01-11">
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||
11 January
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||
<date box="[598,644,1222,1243]" pageId="9" pageNumber="10" value="2019" year="2019">2019</date>
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</date>
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |