222 lines
21 KiB
XML
222 lines
21 KiB
XML
<document id="971619E728BC8EFFB815555DA3B469D8" ID-DOI="10.11646/phytotaxa.345.3.2" ID-ISSN="1179-3163" ID-Zenodo-Dep="13708429" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="felipe" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="GgImagineBatch" IM.taxonomicNames_approvedBy="felipe" IM.treatmentCitations_approvedBy="felipe" IM.treatments_approvedBy="felipe" checkinTime="1725592851508" checkinUser="felipe" docAuthor="Parra, Luis A., Angelini, Claudio, Ortiz-Santana, Beatriz, Mata, Gerardo, Billette, Christophe, Rojo, Carlos, Chen, Jie & Callac, Philippe" docDate="2018" docId="03B9FE3AA31AFFF1F1F4FE72FC20FA95" docLanguage="en" docName="phytotaxa.345.3.2.pdf" docOrigin="Phytotaxa 345 (3)" docSource="http://dx.doi.org/10.11646/phytotaxa.345.3.2" docStyle="DocumentStyle:96748F8F1B6C902996E134952A3A36B9.13:Phytotaxa.2014-.journal_article" docStyleId="96748F8F1B6C902996E134952A3A36B9" docStyleName="Phytotaxa.2014-.journal_article" docStyleVersion="13" docTitle="Agaricus (sect. Pantropicales) L. A. Parra, Angelini, B. Ortiz, Linda J. Chen & Callac 2018, sect. nov." docType="treatment" docVersion="3" lastPageNumber="236" masterDocId="FF808642A30BFFE0F17CFFE8FFC8FF80" masterDocTitle="The genus Agaricus in the Caribbean. Nine new taxa mostly based on collections from the Dominican Republic" masterLastPageNumber="271" masterPageNumber="219" pageNumber="236" updateTime="1725605383008" updateUser="ExternalLinkService" zenodo-license-figures="UNSPECIFIED" zenodo-license-treatments="UNSPECIFIED">
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<mods:title id="222473831CAADC0D93761ABCB545CBF7">The genus Agaricus in the Caribbean. Nine new taxa mostly based on collections from the Dominican Republic</mods:title>
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<mods:namePart id="0E823143B370BCC5166CFB290119E832">Parra, Luis A.</mods:namePart>
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<mods:affiliation id="B9CFFCBD5B8C6087BD7ACFA63414763B">Avda. Padre Claret 7, 5 º G, 09400 Aranda de Duero, Burgos, Spain.</mods:affiliation>
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<mods:namePart id="AA81B0200CDB6910B7344E6F9F5FEF7A">Angelini, Claudio</mods:namePart>
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<mods:affiliation id="A675DB36B159EA3299B3238BBCC09AC5">Jardín Botánico Nacional Dr. Rafael Ma. Moscoso, Apartado 21 - 9, Santo Domingo, Dominican Republic. & Via Cappuccini 78 / 8, 33170 Pordenone, Italia.</mods:affiliation>
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<mods:namePart id="8BB8E4DE32E1EF29E43F4DD7053CE427">Ortiz-Santana, Beatriz</mods:namePart>
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<mods:affiliation id="F1490D0B9C7C38EE9FEFDBB3B67C4F65">US Forest Service, Northern Research Station, Center for Forest Mycology Research, One Gifford Pinchot Drive, Madison, Wisconsin 53726, USA.</mods:affiliation>
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<mods:namePart id="8C1A549C292879DF7D3476A50421A171">Mata, Gerardo</mods:namePart>
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<mods:affiliation id="BC083B512A5D73E03CEC6F8EC33AB225">Instituto de Ecología, A. C., Apartado Postal 63, 91000 Xalapa, Veracruz, Mexico.</mods:affiliation>
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<mods:namePart id="5056BE0B2EF700A3816BD9056945468A">Billette, Christophe</mods:namePart>
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<mods:affiliation id="94F54946FBD13923ABD6E6EBF4941CA1">INRA, MycSA, CS 20032, 33882 Villenave d’Ornon CEDEX, France</mods:affiliation>
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<mods:namePart id="C0271F003D9D68BB303C4FF6560DA77E">Rojo, Carlos</mods:namePart>
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<mods:affiliation id="1F64F9EE0BCED755B90DBD1902EDDB0D">Biotecnología Forestal Aplicada (IdForest), Calle Curtidores 17, 34004 Palencia, Palencia, Spain.</mods:affiliation>
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<mods:namePart id="0E0A878F35107FBB31D4BFD93F3B7FAF">Chen, Jie</mods:namePart>
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<mods:affiliation id="0F04392C74F8416BF3CFD52EA4295B85">AV 7 1715, Córdoba Centro, 94500 Córdoba, Veracruz, Mexico.</mods:affiliation>
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<mods:namePart id="617038CE908338AEB34668C31D30C377">Callac, Philippe</mods:namePart>
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<mods:affiliation id="12367698DB06306A16E340E4CB75A144">INRA, MycSA, CS 20032, 33882 Villenave d’Ornon CEDEX, France</mods:affiliation>
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<mods:title id="F4C40E8004C5188CC2D9AF1323D3E5A3">Phytotaxa</mods:title>
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<mods:part id="8E09E9C26D1891EBDA6258C6AFF2E6ED">
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<mods:date id="5AF790AFA940E7606B898257721B1760">2018</mods:date>
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<mods:number id="D634CAFFA4FE51B74D7229E9E3CD283C">2018-03-27</mods:number>
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<mods:number id="FCC28891AE6ED583F32D698AF44AC200">345</mods:number>
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<mods:detail id="19DC5C13ED9EA110CC7C3A89E6A496EB" type="issue">
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<mods:number id="6719645E8C9AF3EFD803A50EBCC4EFBC">3</mods:number>
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<mods:start id="CE0BF8542FDCE2BE82D0ACDB9B8CFC4B">219</mods:start>
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<mods:url id="9C2C9907C2704E026FBD03CC21F22F90">http://dx.doi.org/10.11646/phytotaxa.345.3.2</mods:url>
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<mods:classification id="D2D327699F0998491B83F6D689C78A94">journal article</mods:classification>
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<mods:identifier id="AFA8C60388B1C3774FB82DD50537219D" type="DOI">10.11646/phytotaxa.345.3.2</mods:identifier>
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<mods:identifier id="2597900C8725A299FC36F1475354B5D8" type="ISSN">1179-3163</mods:identifier>
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<treatment id="03B9FE3AA31AFFF1F1F4FE72FC20FA95" ID-DOI="http://doi.org/10.5281/zenodo.13709239" ID-Zenodo-Dep="13709239" LSID="urn:lsid:plazi:treatment:03B9FE3AA31AFFF1F1F4FE72FC20FA95" httpUri="http://treatment.plazi.org/id/03B9FE3AA31AFFF1F1F4FE72FC20FA95" lastPageNumber="236" pageId="17" pageNumber="236">
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<subSubSection id="C30A1CA7A31AFFF1F1F4FE72FEB3FE7B" pageId="17" pageNumber="236" type="nomenclature">
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<paragraph id="8BAF4F2CA31AFFF1F1F4FE72FB66FE35" blockId="17.[136,1198,410,437]" box="[136,1198,410,437]" pageId="17" pageNumber="236">
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<heading id="D0E7F840A31AFFF1F1F4FE72FB66FE35" box="[136,1198,410,437]" fontSize="11" level="2" pageId="17" pageNumber="236" reason="3">
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<taxonomicName id="4C1034AFA31AFFF1F1F4FE72FBF3FE35" authority="L.A. Parra, Angelini, B. Ortiz, Linda J. Chen & Callac" authorityName="L. A. Parra, Angelini, B. Ortiz, Linda J. Chen & Callac" authorityYear="2018" box="[136,1083,410,437]" class="Agaricomycetes" family="Agaricaceae" genus="Agaricus" kingdom="Fungi" order="Agaricales" pageId="17" pageNumber="236" phylum="Basidiomycota" rank="section" section="Pantropicales" status="sect. nov.">
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<emphasis id="B964933EA31AFFF1F1F4FE72FF38FE34" bold="true" box="[136,240,410,436]" italics="true" pageId="17" pageNumber="236">Agaricus</emphasis>
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sect.
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||
<emphasis id="B964933EA31AFFF1F04DFE72FE18FE35" bold="true" box="[305,464,410,437]" italics="true" pageId="17" pageNumber="236">Pantropicales</emphasis>
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||
L.A. Parra, Angelini, B. Ortiz, Linda J. Chen & Callac
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||
</taxonomicName>
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||
,
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||
<emphasis id="B964933EA31AFFF1F53AFE74FB66FE35" box="[1094,1198,412,437]" italics="true" pageId="17" pageNumber="236">
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||
<taxonomicNameLabel id="A2572E45A31AFFF1F53AFE74FB66FE35" box="[1094,1198,412,437]" pageId="17" pageNumber="236" rank="section">sect. nov.</taxonomicNameLabel>
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</emphasis>
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||
</heading>
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</paragraph>
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||
<paragraph id="8BAF4F2CA31AFFF1F1F4FE0EFEB3FE7B" blockId="17.[136,684,486,543]" box="[136,379,486,507]" pageId="17" pageNumber="236">
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||
<emphasis id="B964933EA31AFFF1F1F4FE0EFEC8FE7B" bold="true" box="[136,256,486,507]" pageId="17" pageNumber="236">MycoBank:</emphasis>
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||
MB823276.
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||
</paragraph>
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||
</subSubSection>
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||
<subSubSection id="C30A1CA7A31AFFF1F1F4FDE2FD64FD9F" box="[136,684,522,543]" pageId="17" pageNumber="236" type="materials_examined">
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||
<paragraph id="8BAF4F2CA31AFFF1F1F4FDE2FD64FD9F" blockId="17.[136,684,486,543]" box="[136,684,522,543]" pageId="17" pageNumber="236">
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||
<emphasis id="B964933EA31AFFF1F1F4FDE2FF72FD9F" bold="true" box="[136,186,522,543]" pageId="17" pageNumber="236">
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||
<typeStatus id="54ABF18EA31AFFF1F1F4FDE2FF72FD9F" box="[136,186,522,543]" pageId="17" pageNumber="236">Type</typeStatus>
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||
</emphasis>
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||
:
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||
<taxonomicName id="4C1034AFA31AFFF1F1BBFDE2FD64FD9F" authority="L. A. Parra, Angelini & B. Ortiz." authorityName="L. A. Parra, Angelini & B. Ortiz." box="[199,684,522,543]" class="Agaricomycetes" family="Agaricaceae" genus="Agaricus" kingdom="Fungi" order="Agaricales" pageId="17" pageNumber="236" phylum="Basidiomycota" rank="species" species="lodgeae">
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||
<emphasis id="B964933EA31AFFF1F1BBFDE2FEB8FD9F" box="[199,368,522,543]" italics="true" pageId="17" pageNumber="236">Agaricus lodgeae</emphasis>
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||
L.A. Parra, Angelini & B. Ortiz.
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</taxonomicName>
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</paragraph>
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||
</subSubSection>
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||
<subSubSection id="C30A1CA7A31AFFF1F1F4FDB8FC20FA95" pageId="17" pageNumber="236" type="etymology">
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||
<paragraph id="8BAF4F2CA31AFFF1F1F4FDB8FA6AFD31" blockId="17.[136,1452,592,1301]" pageId="17" pageNumber="236">
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||
<emphasis id="B964933EA31AFFF1F1F4FDB8FEDBFDE9" bold="true" box="[136,275,592,617]" pageId="17" pageNumber="236">Etymology:</emphasis>
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because of its distribution in tropical America (Caribbean region) and tropical Asia (
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<collectingCountry id="F3070FBCA31AFFF1F5C2FDB8FACBFDE9" box="[1214,1283,592,617]" name="China" pageId="17" pageNumber="236">China</collectingCountry>
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and
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<collectingCountry id="F3070FBCA31AFFF1F444FDB8FA69FDE9" box="[1336,1441,592,617]" name="Thailand" pageId="17" pageNumber="236">Thailand</collectingCountry>
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). From the Greek “
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<emphasis id="B964933EA31AFFF1F031FD9CFEBFFD0D" box="[333,375,628,653]" italics="true" pageId="17" pageNumber="236">pan</emphasis>
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” meaning all, and the Latin nominative plural adjective
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<emphasis id="B964933EA31AFFF1F28EFD9CFBA9FD0D" box="[1010,1121,628,653]" italics="true" pageId="17" pageNumber="236">tropicales</emphasis>
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meaning of the tropics (from the Latin
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<emphasis id="B964933EA31AFFF1F18FFD70FE86FD31" box="[243,334,664,689]" italics="true" pageId="17" pageNumber="236">tropicus</emphasis>
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, which, in turn, derives from the Greek
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<emphasis id="B964933EA31AFFF1F26CFD70FCA3FD31" box="[784,875,664,689]" italics="true" pageId="17" pageNumber="236">tropikos</emphasis>
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). Thus, the epithet means:
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<taxonomicName id="4C1034AFA31AFFF1F5E7FD70FAC8FD31" box="[1179,1280,664,689]" class="Agaricomycetes" family="Agaricaceae" genus="Agaricus" kingdom="Fungi" order="Agaricales" pageId="17" pageNumber="236" phylum="Basidiomycota" rank="genus">
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<emphasis id="B964933EA31AFFF1F5E7FD70FAC8FD31" box="[1179,1280,664,689]" italics="true" pageId="17" pageNumber="236">Agaricus</emphasis>
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</taxonomicName>
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of the tropics.
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</paragraph>
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<paragraph id="8BAF4F2CA31AFFF1F1C1FD54FC93FCE5" blockId="17.[136,1452,592,1301]" pageId="17" pageNumber="236">
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||
<emphasis id="B964933EA31AFFF1F1C1FD54FCC1FD55" bold="true" box="[189,777,700,725]" pageId="17" pageNumber="236">Original description, Morphological description:</emphasis>
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Schäffer’s reaction positive dark reddish purple or reddish brown, and KOH reaction yellow when observable on the pileus surface of dried collections. Odor of anise or of almonds when rubbed or cut. Annulus superous, thin, one-layered (simple), without scales in its lower surface. Cheilocystidia generally simple or with one or two septa at the base, usually clavate, pyriform or more or less globose. Spores lacking a rudimentary apical pore, except in some spores of LAPAM 45.
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||
</paragraph>
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||
<paragraph id="8BAF4F2CA31AFFF1F1C1FC98FDD9FC51" blockId="17.[136,1452,592,1301]" pageId="17" pageNumber="236">
|
||
<emphasis id="B964933EA31AFFF1F1C1FC98FF37FC09" bold="true" box="[189,255,880,905]" pageId="17" pageNumber="236">Note:</emphasis>
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||
<taxonomicName id="4C1034AFA31AFFF1F079FC98FBE8FC09" authority="Linda J. Chen & R. L. Zhao (Zhao et al. 2016: 258)" box="[261,1056,880,905]" class="Agaricomycetes" family="Agaricaceae" genus="Agaricus" kingdom="Fungi" order="Agaricales" pageId="17" pageNumber="236" phylum="Basidiomycota" rank="species" species="candidolutescens">
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<emphasis id="B964933EA31AFFF1F079FC98FE2CFC09" box="[261,484,880,905]" italics="true" pageId="17" pageNumber="236">A. candidolutescens</emphasis>
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||
Linda J. Chen & R.L. Zhao (
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||
<bibRefCitation id="EF8132DDA31AFFF1F25BFC98FBD0FC09" author="Zhao, R. - L. & Zhou, J. - L. & Chen, J. & Margaritescu, S. & Sanchez-Ramirez, S. & Hyde, K. D. & Callac, P. & Parra, L. A. & Li, G. - J. & Moncalvo, J. - M." box="[807,1048,880,905]" pageId="17" pageNumber="236" pagination="239 - 292" refId="ref31905" refString="Zhao, R. - L., Zhou, J. - L., Chen, J., Margaritescu, S., Sanchez-Ramirez, S., Hyde, K. D., Callac, P., Parra, L. A., Li, G. - J. & Moncalvo, J. - M. (2016) Towards standardizing taxonomic ranks using divergence times - a case study for reconstruction of the Agaricus taxonomic system. Fungal Diversity 78 (1): 239 - 292. https: // doi. org / 10.1007 / s 13225 - 016 - 0357 - x" type="journal article" year="2016">
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||
Zhao
|
||
<emphasis id="B964933EA31AFFF1F215FC98FC69FC09" box="[873,929,880,905]" italics="true" pageId="17" pageNumber="236">et al.</emphasis>
|
||
2016: 258
|
||
</bibRefCitation>
|
||
)
|
||
</taxonomicName>
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||
was described as having a negative Schäffer’s reaction when fresh. However, reexamination of the dry
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<typeStatus id="54ABF18EA31AFFF1F2F7FC7CFC25FC2D" box="[907,1005,916,941]" pageId="17" pageNumber="236" type="holotype">holotype</typeStatus>
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specimen showed that it had a reddish brown positive Schäffer’s reaction.
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</paragraph>
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||
<paragraph id="8BAF4F2CA31AFFF1F1C1FC34FBC3FB05" blockId="17.[136,1452,592,1301]" pageId="17" pageNumber="236">
|
||
<emphasis id="B964933EA31AFFF1F1C1FC34FDD2FC75" bold="true" box="[189,538,988,1013]" pageId="17" pageNumber="236">Section-specific ITS markers:</emphasis>
|
||
cagctCatgct@136.This marker characterizes the members of
|
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<emphasis id="B964933EA31AFFF1F5C1FC34FB1DFC75" box="[1213,1237,988,1013]" italics="true" pageId="17" pageNumber="236">A.</emphasis>
|
||
sect.
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<emphasis id="B964933EA31AFFF1F473FC34FA63FC75" box="[1295,1451,988,1013]" italics="true" pageId="17" pageNumber="236">Pantropicales</emphasis>
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among all the available sequences of
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<emphasis id="B964933EA31AFFF1F346FBE8FD9BFB99" box="[570,595,1024,1049]" italics="true" pageId="17" pageNumber="236">A.</emphasis>
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subg.
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<taxonomicName id="4C1034AFA31AFFF1F3DDFBE8FD35FB99" box="[673,765,1024,1049]" pageId="17" pageNumber="269" rank="section" section="Minores">
|
||
<emphasis id="B964933EA31AFFF1F3DDFBE8FD35FB99" box="[673,765,1024,1049]" italics="true" pageId="17" pageNumber="236">Minores</emphasis>
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||
</taxonomicName>
|
||
. However, the characteristic nucleotide C is also present at homologous positions in samples of
|
||
<emphasis id="B964933EA31AFFF1F355FBCCFD8AFBBD" box="[553,578,1060,1085]" italics="true" pageId="17" pageNumber="236">A.</emphasis>
|
||
subg.
|
||
<emphasis id="B964933EA31AFFF1F3F2FBCCFCDDFBBD" box="[654,789,1060,1085]" italics="true" pageId="17" pageNumber="236">Minoriopsis</emphasis>
|
||
. Using the two flanking nucleotides [cagcTCAtgct@135– 137], we found that the short DNA segment [TCA] characterizes all samples of
|
||
<emphasis id="B964933EA31AFFF1F57EFBA0FBDBFBE1" box="[1026,1043,1096,1121]" italics="true" pageId="17" pageNumber="236">A</emphasis>
|
||
. sect.
|
||
<emphasis id="B964933EA31AFFF1F526FBA0FB3EFBE1" box="[1114,1270,1096,1121]" italics="true" pageId="17" pageNumber="236">Pantropicales</emphasis>
|
||
exclusively and is not found in other sections in either
|
||
<emphasis id="B964933EA31AFFF1F34BFB84FD80FB05" box="[567,584,1132,1157]" italics="true" pageId="17" pageNumber="236">A</emphasis>
|
||
. subg.
|
||
<taxonomicName id="4C1034AFA31AFFF1F3E5FB84FD3DFB05" box="[665,757,1132,1157]" pageId="17" pageNumber="269" rank="section" section="Minores">
|
||
<emphasis id="B964933EA31AFFF1F3E5FB84FD3DFB05" box="[665,757,1132,1157]" italics="true" pageId="17" pageNumber="236">Minores</emphasis>
|
||
</taxonomicName>
|
||
or
|
||
<emphasis id="B964933EA31AFFF1F266FB84FCE3FB05" box="[794,811,1132,1157]" italics="true" pageId="17" pageNumber="236">A</emphasis>
|
||
. subg.
|
||
<emphasis id="B964933EA31AFFF1F200FB84FBCBFB05" box="[892,1027,1132,1157]" italics="true" pageId="17" pageNumber="236">Minoriopsis</emphasis>
|
||
.
|
||
</paragraph>
|
||
<paragraph id="8BAF4F2CA31AFFF1F1C1FB78FC20FA95" blockId="17.[136,1452,592,1301]" pageId="17" pageNumber="236">
|
||
<emphasis id="B964933EA31AFFF1F1C1FB78FDB9FB29" bold="true" box="[189,625,1168,1193]" pageId="17" pageNumber="236">Stem age and phylogenetic support:</emphasis>
|
||
In the maximum clade credibility (MCC) tree of
|
||
<bibRefCitation id="EF8132DDA31AFFF1F5D2FB78FA48FB29" author="Chen, J. & Callac, P. & Parra, L. A. & Karunarathna, S. C. & He, M. - Q. & Moinard, M. & De Kesel, A. & Raspe, O. & Wisitrassameewong, K. & Hyde, K. D. & Zhao, R. - L." box="[1198,1408,1168,1193]" pageId="17" pageNumber="236" pagination="170 - 196" refId="ref28096" refString="Chen, J., Callac, P., Parra, L. A., Karunarathna, S. C., He, M. - Q., Moinard, M., De Kesel, A., Raspe, O., Wisitrassameewong, K., Hyde, K. D. & Zhao, R. - L., (2017) Study in Agaricus subgenus Minores and allied clades reveals a new American subgenus and contrasting phylogenetic patterns in Europe and Greater Mekong Subregion. Persoonia 38: 170 - 196. https: // doi. org / 10.3767 / 003158517 X 695521" type="journal article" year="2017">
|
||
Chen
|
||
<emphasis id="B964933EA31AFFF1F58EFB78FAEEFB29" box="[1266,1318,1168,1193]" italics="true" pageId="17" pageNumber="236">et al</emphasis>
|
||
. (2017)
|
||
</bibRefCitation>
|
||
the well-supported (PP ≥ 0.99)
|
||
<emphasis id="B964933EA31AFFF1F0B0FB5CFE2CFB4D" box="[460,484,1204,1229]" italics="true" pageId="17" pageNumber="236">A.</emphasis>
|
||
sect.
|
||
<emphasis id="B964933EA31AFFF1F350FB5CFD00FB4D" box="[556,712,1204,1229]" italics="true" pageId="17" pageNumber="236">Pantropicales</emphasis>
|
||
, which was provisionally named
|
||
<emphasis id="B964933EA31AFFF1F52FFB5CFBA3FB4D" box="[1107,1131,1204,1229]" italics="true" pageId="17" pageNumber="236">A.</emphasis>
|
||
sect. 1, is sister to
|
||
<emphasis id="B964933EA31AFFF1F42AFB5CFAAFFB4D" box="[1366,1383,1204,1229]" italics="true" pageId="17" pageNumber="236">A</emphasis>
|
||
. sect.
|
||
<emphasis id="B964933EA31AFFF1F1F4FB30FEC0FB71" box="[136,264,1240,1265]" italics="true" pageId="17" pageNumber="236">Leucocarpi</emphasis>
|
||
and consequently has the same stem age of 27.64 Ma. In our ITS tree (
|
||
<figureCitation id="132B53A9A31AFFF1F56AFB30FB9EFB71" box="[1046,1110,1240,1265]" captionStart="FIGURE 1" captionStartId="7.[136,229,1885,1906]" captionTargetBox="[157,1436,434,1847]" captionTargetId="figure-93@7.[151,1437,425,1860]" captionTargetPageId="7" captionText="FIGURE 1. Maximum likelihood phylogram of Agaricus subg. Minores, A. subg. Minoriopsis, and A. subg. Flavoagaricus resulting from analysis of ITS sequence data. The best scoring RAxML ITS tree is rooted with A. campestris. The bootstrap support values greater than 50% are indicated, and branches with Bayesian posterior probabilities greater than 0.8 are in bold. Species sampled from the Dominican Republic are in red; new taxa are in bold. T = Type specimen." figureDoi="http://doi.org/10.5281/zenodo.13708431" httpUri="https://zenodo.org/record/13708431/files/figure.png" pageId="17" pageNumber="236">Fig. 1</figureCitation>
|
||
), it is also well supported (ML bootstrap support 84%; PP = 1) and includes four species or putative species.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |