160 lines
16 KiB
XML
160 lines
16 KiB
XML
<document id="2B20511047DEE29083ABB056EE29176C" ID-DOI="10.1515/bot-2023-0032" ID-ISSN="1437-4323" ID-Zenodo-Dep="11000251" IM.bibliography_approvedBy="valdenar" IM.illustrations_approvedBy="valdenar" IM.materialsCitations_approvedBy="valdenar" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="GgImagineBatch" IM.taxonomicNames_approvedBy="valdenar" IM.treatmentCitations_approvedBy="felipe" IM.treatments_approvedBy="valdenar" checkinTime="1713580231042" checkinUser="felipe" docAuthor="Calabon, Mark S., Jones, E. B. Gareth, Pang, Ka-Lai, Abdel-Wahab, Mohamed A., Jin, Jing, Devadatha, Bandarupalli, Sadaba, Resurreccion B., Apurillo, Carlo Chris & Hyde, Kevin D." docDate="2023" docId="03C1853BAD65FF63FF37D7EEFB4387AC" docLanguage="en" docName="BotMar.66.4.213-238.pdf" docOrigin="Botanica Marina (Warsaw, Poland) 66 (4)" docSource="http://dx.doi.org/10.1515/bot-2023-0032" docStyle="DocumentStyle:852F6101A3F2630EFBDAB42A7703A325.1:BotMar.2015-.journal_article.open" docStyleId="852F6101A3F2630EFBDAB42A7703A325" docStyleName="BotMar.2015-.journal_article.open" docStyleVersion="1" docTitle="Remispora submersa" docType="treatment" docVersion="3" lastPageNumber="228" masterDocId="FFF8FD43AD6AFF6CFF91D62FFF828755" masterDocTitle="Updates on the classification and numbers of marine fungi" masterLastPageNumber="238" masterPageNumber="213" pageNumber="228" updateTime="1714668755427" updateUser="valdenar" zenodo-license-document="CC-BY-4.0">
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<mods:title id="81C33F1DDEA9A5B40B3FAC12DD6C94E0">Updates on the classification and numbers of marine fungi</mods:title>
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<mods:namePart id="FE41BF71D097B8FA87948F5660D06AA6">Calabon, Mark S.</mods:namePart>
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<mods:namePart id="BB72277E080CAA1E5CCB9D3E076A17B1">Jones, E. B. Gareth</mods:namePart>
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<mods:namePart id="32A302E32906218BF6A8BBF911CCC563">Pang, Ka-Lai</mods:namePart>
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<mods:namePart id="BFDFDE37DE445325B6A63C9C2267D4FB">Abdel-Wahab, Mohamed A.</mods:namePart>
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<mods:namePart id="11CBC2D93DB6FB6A476C02103E914CD7">Jin, Jing</mods:namePart>
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<mods:namePart id="8E8203C3A9E69596354F09041C8F0EBB">Devadatha, Bandarupalli</mods:namePart>
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<mods:namePart id="2D6EDB5EB05D4AC24BC5D0E23EA0570F">Sadaba, Resurreccion B.</mods:namePart>
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<mods:namePart id="46205A4E65141A0837E425C05B090521">Apurillo, Carlo Chris</mods:namePart>
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<mods:namePart id="D42D274CBAD9B9A6EFD9CB4E911B2C69">Hyde, Kevin D.</mods:namePart>
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<mods:title id="B0068FF258BBB11C5F6188CFEB3E6EC8">Botanica Marina</mods:title>
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<mods:date id="B479843FFEFE8EB4C921DEEA991033C7">2023</mods:date>
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<mods:title id="3CD26A8F6C752C54D9481605AE009FCF">Warsaw, Poland</mods:title>
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<mods:number id="08FB69FD1F09B4C62759F615E76E0C78">2023-07-21</mods:number>
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<mods:number id="0B4948FAF9D307BECDDE6926F41630FB">66</mods:number>
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<mods:number id="8DFD464E8569EA57F8DF5613A61F4191">4</mods:number>
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<mods:url id="2938988970C70801B9ABA8D1404F2012">http://dx.doi.org/10.1515/bot-2023-0032</mods:url>
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<mods:classification id="180A6A2206A09B64A5D0ECEB673657F1">journal article</mods:classification>
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<mods:identifier id="18183070C278A00617E972F3E86E1046" type="DOI">10.1515/bot-2023-0032</mods:identifier>
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<mods:identifier id="1B79620975B3A2E7541F3718498D5532" type="ISSN">1437-4323</mods:identifier>
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<mods:identifier id="98356B914298E46ED422A422F01E2B53" type="Zenodo-Dep">11000251</mods:identifier>
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<treatment id="03C1853BAD65FF63FF37D7EEFB4387AC" LSID="urn:lsid:plazi:treatment:03C1853BAD65FF63FF37D7EEFB4387AC" httpUri="http://treatment.plazi.org/id/03C1853BAD65FF63FF37D7EEFB4387AC" lastPageNumber="228" pageId="15" pageNumber="228">
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<subSubSection id="C37267A6AD65FF63FF37D7EEFE4A868D" box="[166,456,449,472]" pageId="15" pageNumber="228" type="nomenclature">
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<paragraph id="8BD7342DAD65FF63FF37D7EEFE4A868D" blockId="15.[166,456,449,472]" box="[166,456,449,472]" pageId="15" pageNumber="228">
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<heading id="D09F8341AD65FF63FF37D7EEFE4A868D" box="[166,456,449,472]" fontSize="36" level="2" pageId="15" pageNumber="228" reason="3">
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<emphasis id="B91CE83FAD65FF63FF37D7EEFE4A868D" bold="true" box="[166,456,449,472]" pageId="15" pageNumber="228">
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2.5.19
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<taxonomicName id="4C684FAEAD65FF63FF60D7EEFE4A868D" ID-CoL="9ZF5Q" box="[241,456,449,472]" class="Sordariomycetes" family="Halosphaeriaceae" genus="Remispora" kingdom="Fungi" order="Microascales" pageId="15" pageNumber="228" phylum="Ascomycota" rank="species" species="submersa">
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<emphasis id="B91CE83FAD65FF63FF60D7EEFE4A868D" bold="true" box="[241,456,449,472]" italics="true" pageId="15" pageNumber="228">Remispora submersa</emphasis>
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</taxonomicName>
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</emphasis>
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</heading>
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</paragraph>
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<subSubSection id="C37267A6AD65FF63FF37D428FB4387AC" pageId="15" pageNumber="228" type="description">
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<paragraph id="8BD7342DAD65FF63FF37D428FB4387AC" blockId="15.[166,794,519,1128]" lastBlockId="15.[824,1451,193,249]" pageId="15" pageNumber="228">
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This new species was described based on the close phylogenetic relationship with
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<taxonomicName id="4C684FAEAD65FF63FD83D404FC98856A" box="[530,794,554,576]" class="Sordariomycetes" family="Halosphaeriaceae" genus="Remispora" kingdom="Fungi" order="Microascales" pageId="15" pageNumber="228" phylum="Ascomycota" rank="species" species="quadri-remis">
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<emphasis id="B91CE83FAD65FF63FD83D404FC98856A" box="[530,794,554,576]" italics="true" pageId="15" pageNumber="228">Remispora quadri-remis</emphasis>
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</taxonomicName>
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and
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<taxonomicName id="4C684FAEAD65FF63FF46D462FEC28534" box="[215,320,588,610]" class="Sordariomycetes" family="Halosphaeriaceae" genus="Remispora" kingdom="Fungi" order="Microascales" pageId="15" pageNumber="228" phylum="Ascomycota" rank="species" species="stellata">
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<emphasis id="B91CE83FAD65FF63FF46D462FEC28534" box="[215,320,588,610]" italics="true" pageId="15" pageNumber="228">R. stellata</emphasis>
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</taxonomicName>
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in a phylogenetic tree of 28S and
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<collectionCode id="ED79ACE8AD65FF63FD24D462FD548537" box="[693,726,589,610]" pageId="15" pageNumber="228">ITS</collectionCode>
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rDNA (
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<bibRefCitation id="EFF949DCAD65FF63FF3CD440FE0885D0" author="Goncalves, M. F. M. & Abreu, A. C. & Hilario, S. & Alves, A." box="[173,394,623,645]" pageId="15" pageNumber="228" pagination="664 - 683" refId="ref15413" refString="Goncalves, M. F. M., Abreu, A. C., Hilario, S., and Alves, A. (2021). Diversity of marine fungi associated with wood baits in the estuary Ria de Aveiro, with descriptions of Paralulworthia halima, comb. nov., Remispora submersa, sp. nov., and Zalerion pseudomaritima, sp. nov. Mycologia 113: 664 - 683." type="journal article" year="2021">Gonçalves et al. 2021</bibRefCitation>
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||
). This is an asexual fungus producing white mycelia and abundant cylindrical conidia. The conidiogenesis was unclear although it was described as
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<emphasis id="B91CE83FAD65FF63FF37D4F9FF3285B8" bold="true" box="[166,176,726,749]" italics="true" pageId="15" pageNumber="228">“</emphasis>
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conidiophores reduced to conidiogenous cells
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||
<emphasis id="B91CE83FAD65FF63FD0CD4F9FD2585B8" bold="true" box="[669,679,726,749]" italics="true" pageId="15" pageNumber="228">”</emphasis>
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. This type of asexual morphology is unusual in the
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<taxonomicName id="4C684FAEAD65FF63FDC8D4D6FC94845A" box="[601,790,761,783]" class="Sordariomycetes" family="Halosphaeriaceae" kingdom="Fungi" order="Microascales" pageId="15" pageNumber="228" phylum="Ascomycota" rank="family">Halosphaeriaceae</taxonomicName>
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, as they generally have brown, septate conidia. A wider range of taxa should have been included in the phylogenetic analysis, especially the type species of
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<taxonomicName id="4C684FAEAD65FF63FD34D54EFC968423" baseAuthorityName="Bakhit and Abdel-Wahab" baseAuthorityYear="2022" box="[677,788,865,886]" class="Sordariomycetes" family="Halosphaeriaceae" genus="Remispora" kingdom="Fungi" order="Microascales" pageId="15" pageNumber="228" phylum="Ascomycota" rank="genus">
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<emphasis id="B91CE83FAD65FF63FD34D54EFC968423" box="[677,788,865,886]" italics="true" pageId="15" pageNumber="228">Remispora</emphasis>
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</taxonomicName>
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,
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<taxonomicName id="4C684FAEAD65FF63FF37D5ABFEA584CC" box="[166,295,900,921]" class="Sordariomycetes" family="Halosphaeriaceae" genus="Remispora" kingdom="Fungi" order="Microascales" pageId="15" pageNumber="228" phylum="Ascomycota" rank="species" species="maritima">
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<emphasis id="B91CE83FAD65FF63FF37D5ABFEA584CC" box="[166,295,900,921]" italics="true" pageId="15" pageNumber="228">R. maritima</emphasis>
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</taxonomicName>
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.
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<typeStatus id="54D38A8FAD65FF63FEA9D5ACFE1584CC" box="[312,407,899,921]" pageId="15" pageNumber="228" type="holotype">Holotype</typeStatus>
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material was requested, especially slides of the conidiophores and conidia, but these were not available. A culture of
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<taxonomicName id="4C684FAEAD65FF63FE04D5E6FD918488" box="[405,531,968,990]" class="Sordariomycetes" family="Halosphaeriaceae" genus="Remispora" kingdom="Fungi" order="Microascales" pageId="15" pageNumber="228" phylum="Ascomycota" rank="species" species="submersa">
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<emphasis id="B91CE83FAD65FF63FE04D5E6FD918488" box="[405,531,968,990]" italics="true" pageId="15" pageNumber="228">R. submersa</emphasis>
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</taxonomicName>
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was provided, but failed to sporulate, despite growth on three different media and wood picks (
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<figureCitation id="135328A8AD65FF63FEF0D222FE3E8371" box="[353,444,1037,1060]" captionStart="Figure 5" captionStartId="15.[166,224,1781,1800]" captionTargetBox="[167,679,1200,1741]" captionTargetId="figure-561@15.[166,680,1199,1742]" captionTargetPageId="15" captionText="Figure 5: Colony of Remispora submersa (MUM 20.48) in malt extract agar (MEA) for 7 days at 25 °C: (A) obverse, (B) reverse." figureDoi="http://doi.org/10.5281/zenodo.11000261" httpUri="https://zenodo.org/record/11000261/files/figure.png" pageId="15" pageNumber="228">Figure 5</figureCitation>
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). The culture was re-sequenced, grouping in the
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<taxonomicName id="4C684FAEAD65FF63FEDDD21FFE528310" box="[332,464,1072,1093]" class="Sordariomycetes" genus="Sarocladium" kingdom="Fungi" order="Hypocreales" pageId="15" pageNumber="228" phylum="Ascomycota" rank="genus">
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<emphasis id="B91CE83FAD65FF63FEDDD21FFE528310" box="[332,464,1072,1093]" italics="true" pageId="15" pageNumber="228">Sarocladium</emphasis>
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</taxonomicName>
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clade and the species
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<taxonomicName id="4C684FAEAD65FF63FD24D21FFC9B8310" box="[693,793,1072,1093]" class="Sordariomycetes" genus="Sarocladium" kingdom="Fungi" order="Hypocreales" pageId="15" pageNumber="228" phylum="Ascomycota" rank="species" species="kiliense">
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<emphasis id="B91CE83FAD65FF63FD24D21FFC9B8310" box="[693,793,1072,1093]" italics="true" pageId="15" pageNumber="228">S. kiliense</emphasis>
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</taxonomicName>
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with high statistical support (
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<figureCitation id="135328A8AD65FF63FE43D27DFDAA833D" box="[466,552,1106,1128]" captionStart="Figure 6" captionStartId="16.[136,194,1417,1436]" captionTargetBox="[146,1199,192,1376]" captionTargetId="figure-48@16.[136,1200,191,1377]" captionTargetPageId="16" captionText="Figure 6: Phylogram generated from maximum likelihood (ML) analysis based on combined LSU, ITS, and act1 sequence data representing Sarocladiaceae (Hypocreales). Thirty-seven strains are included in the combined analyses which comprised 1753 characters (504 characters for LSU, 478 characters for ITS,771 characters for act1) after alignment. Acremonium variecolor strains CBS 130360 and FMR 11141 in Bionectriaceae (Hypocreales) were used as the outgroup taxa. The best scoring RAxML tree with a final likelihood value of −8526.836 is presented. The matrix had 435 distinct alignment patterns, 356 parsimony-informative, 73 singleton sites, and 1332 constant sites. Estimated base frequencies were as follows: A = 0.216, C = 0.298, G = 0.265, T = 0.221; substitution rates: AC = 2.09479, AG = 3.08268, AT = 2.09479, CG = 1.00000, CT = 10.05849, GT = 1.000000; gamma distribution shape parameter α = 0.574. Bootstrap support values for ML equal to or greater than 75 % are given above the nodes (left side). Bayesian posterior probabilities (BYPP) equal to or greater than 0.95 are given above the nodes (right side). Ex-type strains are in bold and newly generated sequences are in blue." figureDoi="http://doi.org/10.5281/zenodo.11000263" httpUri="https://zenodo.org/record/11000263/files/figure.png" pageId="15" pageNumber="228">Figure 6</figureCitation>
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), a species with hyaline conidia as in those reported for
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<taxonomicName id="4C684FAEAD65FF63FB12D6EEFA828783" box="[1155,1280,193,214]" class="Sordariomycetes" family="Halosphaeriaceae" genus="Remispora" kingdom="Fungi" order="Microascales" pageId="15" pageNumber="228" phylum="Ascomycota" rank="species" species="submersa">
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<emphasis id="B91CE83FAD65FF63FB12D6EEFA828783" box="[1155,1280,193,214]" italics="true" pageId="15" pageNumber="228">R. submersa</emphasis>
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</taxonomicName>
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. Further studies are required to resolve this anomaly.
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</paragraph>
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</subSubSection>
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||
</treatment>
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</document> |