189 lines
23 KiB
XML
189 lines
23 KiB
XML
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<mods:title id="D34A9FCE15D234FD4A73CAF519B8D4C4">A new integrated morpho- and molecular systematic classification of Cenozoic radiolarians (Class Polycystinea) - suprageneric taxonomy and logical nomenclatorial acts</mods:title>
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<mods:namePart id="FE5104AA0C1E54DC4E1FA841CECD3F23">Suzuki, Noritoshi</mods:namePart>
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<mods:namePart id="96AEABEDD633A4B2879415AE4B2B304D">Caulet, Jean-Pierre</mods:namePart>
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<mods:namePart id="2A453B7A584C0B20617DB0FAD21DE2DC">Dumitrica, Paulian</mods:namePart>
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<mods:title id="EE95EA51F1948F56842873E1C9AEBF47">Geodiversitas</mods:title>
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<paragraph id="8B9B6B65FFE8FE490675F926FAD0485E" blockId="124.[832,1437,1783,1842]" pageId="124" pageNumber="527">
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Family
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<taxonomicName id="4C2410E6FFE8FE4906A5F926FB0E487D" authority="Biard & Suzuki" authorityName="Biard & Suzuki" authorityYear="2015" box="[912,1271,1783,1809]" class="Polycystinea" family="Collophidiidae" higherTaxonomySource="GBIF" kingdom="Chromista" order="Collodaria" pageId="124" pageNumber="527" phylum="Retaria" rank="family">COLLOPHIDIIDAE Biard & Suzuki</taxonomicName>
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<emphasis id="B950B777FFE8FE4901CBF929FAED487D" box="[1278,1300,1784,1809]" italics="true" pageId="124" pageNumber="527">in</emphasis>
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<bibRefCitation id="EFB51694FFE8FE49002EF926FAD0485E" author="BIARD T. & PILLET L. & DECELLE J. & POIRIER C. & SUZUKI N. & NOT F." pageId="124" pageNumber="527" pagination="374 - 388" refId="ref168296" refString="BIARD T., PILLET L., DECELLE J., POIRIER C., SUZUKI N. & NOT F. 2015. - Towards an Integrative Morpho-molecular Classification of the Collodaria (Polycystinea, Radiolaria). Protist 166 (3): 374 - 388. https: // doi. org / 10.1016 / j. protis. 2015.05.002" type="journal article" year="2015">
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Biard, Pillet, Decelle, Poirier,
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<taxonomicName id="4C2410E6FFE8FE490162F8C8FB63485D" authority="Suzuki & Caulet & Dumitrica, 2021" authorityName="Suzuki & Caulet & Dumitrica" authorityYear="2021" box="[1111,1178,1817,1841]" family="Suzuki" pageId="124" pageNumber="571" rank="family" status="fam. nov.">Suzuki</taxonomicName>
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& Not, 2015
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</bibRefCitation>
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</paragraph>
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<subSubSection id="C33E38EEFFE8FE490618F883FB274886" pageId="124" pageNumber="527" type="reference_group">
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<paragraph id="8B9B6B65FFE8FE490618F883FBC948E9" blockId="124.[813,1455,1874,1925]" pageId="124" pageNumber="527">
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<treatmentCitationGroup id="AB344C4BFFE8FE490618F883FBC948E9" pageId="124" pageNumber="527">
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<taxonomicName id="4C2410E6FFE8FE490618F883FB9E4806" authority="Biard & Suzuki" authorityName="Biard & Suzuki" authorityYear="2015" box="[813,1127,1874,1898]" class="Polycystinea" family="Collophidiidae" higherTaxonomySource="GBIF" kingdom="Chromista" order="Collodaria" pageId="124" pageNumber="527" phylum="Retaria" rank="family">Collophidiidae Biard & Suzuki</taxonomicName>
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<emphasis id="B950B777FFE8FE490145F882FB7D4806" box="[1136,1156,1875,1898]" italics="true" pageId="124" pageNumber="527">in</emphasis>
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<treatmentCitation id="0A854D74FFE8FE4901BEF883FBD548E9" author="BIARD T. & PILLET L. & DECELLE J. & POIRIER C. & SUZUKI N. & NOT F." page="384" pageId="124" pageNumber="527" year="2015">
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<bibRefCitation id="EFB51694FFE8FE4901BEF883FBD548E9" author="BIARD T. & PILLET L. & DECELLE J. & POIRIER C. & SUZUKI N. & NOT F." pageId="124" pageNumber="527" pagination="374 - 388" refId="ref168296" refString="BIARD T., PILLET L., DECELLE J., POIRIER C., SUZUKI N. & NOT F. 2015. - Towards an Integrative Morpho-molecular Classification of the Collodaria (Polycystinea, Radiolaria). Protist 166 (3): 374 - 388. https: // doi. org / 10.1016 / j. protis. 2015.05.002" type="journal article" year="2015">
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Biard, Pillet, Decelle, Poirier,
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<taxonomicName id="4C2410E6FFE8FE49061BF8BDFC8948E8" authority="Suzuki & Caulet & Dumitrica, 2021" authorityName="Suzuki & Caulet & Dumitrica" authorityYear="2021" box="[814,880,1900,1924]" family="Suzuki" pageId="124" pageNumber="571" rank="family" status="fam. nov.">Suzuki</taxonomicName>
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& Not, 2015: 384
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</bibRefCitation>
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</treatmentCitation>
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.
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</treatmentCitationGroup>
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</paragraph>
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<paragraph id="8B9B6B65FFE8FE490618F84FFB274886" blockId="124.[811,1456,1950,2027]" pageId="124" pageNumber="527">
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<taxonomicName id="4C2410E6FFE8FE490618F84FFC5C48DA" box="[813,933,1950,1974]" class="Polycystinea" family="Collophidae" higherTaxonomySource="GBIF" kingdom="Chromista" order="Collodarida" pageId="124" pageNumber="527" phylum="Retaria" rank="family">Collophidae</taxonomicName>
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–
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<bibRefCitation id="EFB51694FFE8FE4906F7F84FFB8548DA" author="ISHITANI Y. & UJIIE Y. & DE VARGAS C. & NOT F. & TAKAHASHI K." box="[962,1148,1950,1974]" pageId="124" pageNumber="527" pagination="35775" refId="ref181935" refString="ISHITANI Y., UJIIE Y., DE VARGAS C., NOT F. & TAKAHASHI K. 2012. - Phylogenetic Relationships and Evolutionary Patterns of the Order Collodaria (Radiolaria). PLoS ONE 7 (5): e 35775. https: // doi. org / 10.1371 / journal. pone. 0035775" type="journal article" year="2012">
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Ishitani
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<emphasis id="B950B777FFE8FE490127F84EFBBB48DA" box="[1042,1090,1950,1974]" italics="true" pageId="124" pageNumber="527">et al.</emphasis>
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2012
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</bibRefCitation>
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||
[no pages can be specified due to ambiguous indication, no
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||
<typeStatus id="549FD5C7FFE8FE490171F868FB9748BD" box="[1092,1134,1977,2001]" pageId="124" pageNumber="527">type</typeStatus>
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genus indication, and grammatic error in name formation, unavailable name].
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</paragraph>
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||
</subSubSection>
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<subSubSection id="C33E38EEFFE9FE4805B1FF09FE834E48" pageId="125" pageNumber="528" type="type_taxon">
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<paragraph id="8B9B6B65FFE9FE4805B1FF09FE834E48" blockId="125.[132,775,215,293]" pageId="125" pageNumber="528">
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<typeStatus id="549FD5C7FFE9FE4805B1FF09FF4C4F81" box="[132,181,216,239]" pageId="125" pageNumber="528">TYPE</typeStatus>
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GENUS. —
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<taxonomicName id="4C2410E6FFE9FE48041CFF06FD9E4F83" authority="Haeckel, 1887: 26" authorityName="Haeckel" authorityPageNumber="26" authorityYear="1887" box="[297,615,215,240]" class="Polycystinea" family="Collophidiidae" genus="Collophidium" higherTaxonomySource="GBIF" kingdom="Chromista" order="Collodaria" pageId="125" pageNumber="528" phylum="Retaria" rank="genus">
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<emphasis id="B950B777FFE9FE48041CFF06FE524F83" box="[297,427,215,239]" italics="true" pageId="125" pageNumber="528">Collophidium</emphasis>
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<bibRefCitation id="EFB51694FFE9FE480487FF06FD9E4F83" author="HAECKEL E." box="[434,615,215,240]" pageId="125" pageNumber="528" refId="ref179311" refString="HAECKEL E. 1887. - Report on the Radiolaria collected by H. M. S. Challenger during the years 1873 - 1876. Report on the Scientific Results of the Voyage of the H. M. S. Challenger, Zoology 18: clxxxviii + 1803. https: // www. biodiversitylibrary. org / page / 23487916" type="url" year="1887">Haeckel, 1887: 26</bibRefCitation>
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</taxonomicName>
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[
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<typeStatus id="549FD5C7FFE9FE480746FF09FD664F9C" box="[627,671,216,240]" pageId="125" pageNumber="528">type</typeStatus>
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||
species by subsequent designation (
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||
<bibRefCitation id="EFB51694FFE9FE480445FF23FDFF4E66" author="CAMPBELL A. S." box="[368,518,242,266]" pageId="125" pageNumber="528" pagination="11 - 195" refId="ref170808" refString="CAMPBELL A. S. 1954. - Radiolaria, in MOORE R. C. (ed.), Treatise on Invertebrate Paleontology. Vol. Part. D, Protista 3. Geological Society of America and University of Kansas Press, Lawrence / Kansas: 11 - 195." type="book chapter" year="1954">Campbell 1954</bibRefCitation>
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||
: D44):
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||
<taxonomicName id="4C2410E6FFE9FE48077AFF23FE894E48" authority="Haeckel, 1887: 26" authorityName="Haeckel" authorityPageNumber="26" authorityYear="1887" class="Polycystinea" family="Collozoidae" genus="Collozoum" higherTaxonomySource="GBIF" kingdom="Chromista" order="Spumellaria" pageId="125" pageNumber="528" phylum="Retaria" rank="species" species="serpentinum">
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<emphasis id="B950B777FFE9FE48077AFF23FF494E48" italics="true" pageId="125" pageNumber="528">Collozoum serpentinum</emphasis>
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<bibRefCitation id="EFB51694FFE9FE480583FEDDFE894E48" author="HAECKEL E." box="[182,368,268,293]" pageId="125" pageNumber="528" refId="ref179311" refString="HAECKEL E. 1887. - Report on the Radiolaria collected by H. M. S. Challenger during the years 1873 - 1876. Report on the Scientific Results of the Voyage of the H. M. S. Challenger, Zoology 18: clxxxviii + 1803. https: // www. biodiversitylibrary. org / page / 23487916" type="url" year="1887">Haeckel, 1887: 26</bibRefCitation>
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</taxonomicName>
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].
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</paragraph>
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</subSubSection>
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||
<subSubSection id="C33E38EEFFE9FE4805B1FEEFFE2E4EE9" pageId="125" pageNumber="528" type="reference_group">
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||
<paragraph id="8B9B6B65FFE9FE4805B1FEEFFD554E39" blockId="125.[132,684,317,341]" box="[132,684,317,341]" pageId="125" pageNumber="528">
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INCLUDED GENERA. —
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<taxonomicName id="4C2410E6FFE9FE48045DFEECFD514E39" authority="Haeckel, 1887: 26" authorityName="Haeckel" authorityPageNumber="26" authorityYear="1887" box="[360,680,317,341]" class="Polycystinea" family="Collophidiidae" genus="Collophidium" higherTaxonomySource="GBIF" kingdom="Chromista" order="Collodaria" pageId="125" pageNumber="528" phylum="Retaria" rank="genus">
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<emphasis id="B950B777FFE9FE48045DFEECFE134E39" box="[360,490,317,341]" italics="true" pageId="125" pageNumber="528">Collophidium</emphasis>
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<bibRefCitation id="EFB51694FFE9FE4804C4FEECFD514E39" author="HAECKEL E." box="[497,680,317,341]" pageId="125" pageNumber="528" refId="ref179311" refString="HAECKEL E. 1887. - Report on the Radiolaria collected by H. M. S. Challenger during the years 1873 - 1876. Report on the Scientific Results of the Voyage of the H. M. S. Challenger, Zoology 18: clxxxviii + 1803. https: // www. biodiversitylibrary. org / page / 23487916" type="url" year="1887">Haeckel, 1887: 26</bibRefCitation>
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</taxonomicName>
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||
.
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||
</paragraph>
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||
<paragraph id="8B9B6B65FFE9FE4805B1FEBFFE2E4EE9" blockId="125.[132,471,366,390]" box="[132,471,366,390]" pageId="125" pageNumber="528">
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||
NOMEN DUBIUM. —
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<taxonomicName id="4C2410E6FFE9FE480461FEBFFE2B4EEA" authorityName="Haeckel" authorityYear="1887" box="[340,466,366,390]" class="Polycystinea" genus="Colloprunum" higherTaxonomySource="GBIF" kingdom="Chromista" pageId="125" pageNumber="528" phylum="Retaria" rank="genus">
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<emphasis id="B950B777FFE9FE480461FEBFFE2B4EEA" box="[340,466,366,390]" italics="true" pageId="125" pageNumber="528">Colloprunum</emphasis>
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</taxonomicName>
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||
.
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||
</paragraph>
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||
</subSubSection>
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||
<subSubSection id="C33E38EEFFE9FE4805B1FE4EFDEE4DEA" pageId="125" pageNumber="528" type="diagnosis">
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||
<paragraph id="8B9B6B65FFE9FE4805B1FE4EFD514D39" blockId="125.[131,777,414,597]" pageId="125" pageNumber="528">
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DIAGNOSIS. —
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<taxonomicName id="4C2410E6FFE9FE48042CFE4FFE524EDA" authorityName="Biard & Suzuki" authorityYear="2015" box="[281,427,414,438]" class="Polycystinea" family="Collophidiidae" higherTaxonomySource="GBIF" kingdom="Chromista" order="Collodaria" pageId="125" pageNumber="528" phylum="Retaria" rank="family">Collophidiidae</taxonomicName>
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are Colonial
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<taxonomicName id="4C2410E6FFE9FE480719FE4FFD6A4EDA" authorityName="Haeckel" authorityYear="1882" box="[556,659,414,438]" class="Polycystinea" higherTaxonomySource="GBIF" kingdom="Chromista" order="Collodaria" pageId="125" pageNumber="528" phylum="Retaria" rank="order">Collodaria</taxonomicName>
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||
with a variable elongated, cylindrical, or spherical appearance. Each colony is comprised of a delicate gelatinous material that encompasses the scattered algal symbionts and the string-like aggregations. A stringlike aggregation includes tens to a hundred collodarian cells within a firm gelatinous material. The central capsule is of an elongated cylindrical shape, with an endoplasm highly vacuolated.
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||
</paragraph>
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<paragraph id="8B9B6B65FFE9FE4805B1FDBFFDEE4DEA" blockId="125.[132,535,622,646]" box="[132,535,622,646]" pageId="125" pageNumber="528">STRATIGRAPHIC OCCURRENCE. — Living.</paragraph>
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||
</subSubSection>
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||
<subSubSection id="C33E38EEFFE9FE4805B1FD6AFCFE4BB9" pageId="125" pageNumber="528" type="discussion">
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||
<paragraph id="8B9B6B65FFE9FE4805B1FD6AFF114DBF" blockId="125.[130,775,699,1237]" box="[132,232,699,725]" pageId="125" pageNumber="528">REMARKS</paragraph>
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<paragraph id="8B9B6B65FFE9FE4805B1FD0AFD014C1A" blockId="125.[130,775,699,1237]" pageId="125" pageNumber="528">
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||
The taxonomic independency of
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<taxonomicName id="4C2410E6FFE9FE4804DAFD0AFD874D99" authorityName="Haeckel" authorityYear="1887" box="[495,638,731,757]" class="Polycystinea" family="Collophidiidae" genus="Collophidium" higherTaxonomySource="GBIF" kingdom="Chromista" order="Collodaria" pageId="125" pageNumber="528" phylum="Retaria" rank="genus">
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||
<emphasis id="B950B777FFE9FE4804DAFD0AFD874D99" box="[495,638,731,757]" italics="true" pageId="125" pageNumber="528">Collophidium</emphasis>
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</taxonomicName>
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was initially recognized by the studies of
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<bibRefCitation id="EFB51694FFE9FE48049AFD2AFD584C7A" author="ANDERSON O. R. & GASTRICH M. D. & AMARAL ZETTLER L." box="[431,673,763,790]" pageId="125" pageNumber="528" pagination="81 - 89" refId="ref167499" refString="ANDERSON O. R., GASTRICH M. D. & AMARAL ZETTLER L. 1999. - Fine structure of the colonial radiolarian Collozoum serpentinum (Polycystinea: Spumellaria) with a reconsideration of its taxonomic status and re-establishment of the genus Collophidium (Haeckel). Marine Micropaleontology 36 (2 - 3): 81 - 89. https: // doi. org / 10.1016 / S 0377 - 8398 (98) 00029 - 2" type="journal article" year="1999">
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||
Anderson
|
||
<emphasis id="B950B777FFE9FE480728FD2DFDA94C79" box="[541,592,763,789]" italics="true" pageId="125" pageNumber="528">et al.</emphasis>
|
||
(1999)
|
||
</bibRefCitation>
|
||
. This was achieved by the observation of ultrafine cellular structure and the publication of “living” images.Their results were later supported by a molecular phylogenetic study by
|
||
<bibRefCitation id="EFB51694FFE9FE480722FC8AFD0A4C1A" author="ISHITANI Y. & UJIIE Y. & DE VARGAS C. & NOT F. & TAKAHASHI K." box="[535,755,859,886]" pageId="125" pageNumber="528" pagination="35775" refId="ref181935" refString="ISHITANI Y., UJIIE Y., DE VARGAS C., NOT F. & TAKAHASHI K. 2012. - Phylogenetic Relationships and Evolutionary Patterns of the Order Collodaria (Radiolaria). PLoS ONE 7 (5): e 35775. https: // doi. org / 10.1371 / journal. pone. 0035775" type="journal article" year="2012">
|
||
Ishitani
|
||
<emphasis id="B950B777FFE9FE48075AFC8DFD5B4C19" box="[623,674,859,885]" italics="true" pageId="125" pageNumber="528">et al.</emphasis>
|
||
(2012)
|
||
</bibRefCitation>
|
||
.
|
||
</paragraph>
|
||
<paragraph id="8B9B6B65FFE9FE4805AEFCADFCFE4BB9" blockId="125.[130,775,699,1237]" pageId="125" pageNumber="528">
|
||
The microbial eukaryotes (0.8-20 Μm) of the bathypelagic zone (
|
||
<quantity id="4CDCC680FFE9FE4805FDFC4DFE9C4CDA" box="[200,357,924,950]" metricMagnitude="3" metricUnit="m" metricValue="3.5" metricValueMax="4.0" metricValueMin="3.0" pageId="125" pageNumber="528" unit="m" value="3500.0" valueMax="4000.0" valueMin="3000.0">3000-4000 m</quantity>
|
||
in water depth) in global oceans are dominated by
|
||
<taxonomicName id="4C2410E6FFE9FE48042EFC6DFE504CBA" authorityName="Haeckel" authorityYear="1887" box="[283,425,956,982]" class="Polycystinea" family="Collophidiidae" genus="Collophidium" higherTaxonomySource="GBIF" kingdom="Chromista" order="Collodaria" pageId="125" pageNumber="528" phylum="Retaria" rank="genus">
|
||
<emphasis id="B950B777FFE9FE48042EFC6DFE504CBA" box="[283,425,956,982]" italics="true" pageId="125" pageNumber="528">Collophidium</emphasis>
|
||
</taxonomicName>
|
||
, suggesting the important role of this genus in the deep-ocean (
|
||
<bibRefCitation id="EFB51694FFE9FE48048EFC0DFD854C9A" author="PERNICE M. C. & GINER C. R. & LOGARES R. & BEL J. & ACINAS S. G. & DUARTE C. M. & GASOL J. M. & MASSANA R." box="[443,636,988,1014]" pageId="125" pageNumber="528" pagination="945 - 958" refId="ref190669" refString="PERNICE M. C., GINER C. R., LOGARES R., PERERA- BEL J., ACINAS S. G., DUARTE C. M., GASOL J. M. & MASSANA R. 2016. - Large variability of bathypelagic microbial eukaryotic communities across the world's oceans. The ISME Journal 10 (4): 945 - 958. https: // doi. org / 10.1038 / ismej. 2015.170" type="journal article" year="2016">
|
||
Pernice
|
||
<emphasis id="B950B777FFE9FE48073BFC0DFDC64C99" box="[526,575,988,1014]" italics="true" pageId="125" pageNumber="528">et al.</emphasis>
|
||
2016
|
||
</bibRefCitation>
|
||
). This family can be easily distinguished from the other collodarian families by the presence of cell-embedded sacks observed within the gelatinous matter. Many undescribed genera and species are encountered in plankton samples. Four
|
||
<taxonomicName id="4C2410E6FFE9FE480712FB8AFCFE4B19" box="[551,775,1115,1141]" class="Polycystinea" family="Collophidiidae" genus="Collophidium" higherTaxonomySource="GBIF" kingdom="Chromista" order="Collodaria" pageId="125" pageNumber="528" phylum="Retaria" rank="species" species="undetermined">
|
||
<emphasis id="B950B777FFE9FE480712FB8AFD4E4B19" box="[551,695,1115,1141]" italics="true" pageId="125" pageNumber="528">Collophidium</emphasis>
|
||
species
|
||
</taxonomicName>
|
||
were drawn in figs 10-13 of
|
||
<bibRefCitation id="EFB51694FFE9FE480495FBAAFD274BFA" author="STRELKOV A. A. & RESHETNYAK V. V." box="[416,734,1147,1174]" pageId="125" pageNumber="528" pagination="295 - 418" refId="ref196870" refString="STRELKOV A. A. & RESHETNYAK V. V. 1971. - Colonial Spumellarian radiolarians of the world ocean. Akademiya nauk SSSR, Zoologicheskii Institut, Issledovaniya Fauny Morei 9 (17): 295 - 418. [in Russian]" type="journal article" year="1971">Strelkov & Reshetnyak (1971)</bibRefCitation>
|
||
but need to be described again as new species due to their identification based on the unillustrated species of
|
||
<bibRefCitation id="EFB51694FFE9FE48076DFB6AFCFB4BB9" author="HAECKEL E." box="[600,770,1211,1237]" pageId="125" pageNumber="528" refId="ref179311" refString="HAECKEL E. 1887. - Report on the Radiolaria collected by H. M. S. Challenger during the years 1873 - 1876. Report on the Scientific Results of the Voyage of the H. M. S. Challenger, Zoology 18: clxxxviii + 1803. https: // www. biodiversitylibrary. org / page / 23487916" type="url" year="1887">Haeckel (1887)</bibRefCitation>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |