143 lines
12 KiB
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143 lines
12 KiB
XML
<document ID-DOI="10.1515/mammalia-2019-0143" ID-GBIF-Dataset="b8852ae2-e3de-4ffa-b81c-9ea10f59a4f0" ID-ISSN="1864-1547" ID-Zenodo-Dep="7837749" IM.bibliography_approvedBy="tatiana" IM.illustrations_approvedBy="tatiana" IM.tables_approvedBy="tatiana" IM.taxonomicNames_approvedBy="tatiana" IM.treatments_approvedBy="tatiana" checkinTime="1681741835796" checkinUser="felipe" docAuthor="Shpirer, Erez, Haddas-Sasson, Michal, Spivak-Glater, Maya, Feldstein, Tamar, Meiri, Shai & Huchon, Dorothée" docDate="2021" docId="03AA6946B36EC62B1D492D6AFE1748EA" docLanguage="en" docName="Mammalia.85.1.79-89.pdf" docOrigin="Mammalia (Warsaw, Poland) 85 (1)" docSource="http://dx.doi.org/10.1515/mammalia-2019-0143" docStyle="DocumentStyle:6C173CCC1D5EC0136B755626151D98B6.1:Mammalia.2015-.journal_article" docStyleId="6C173CCC1D5EC0136B755626151D98B6" docStyleName="Mammalia.2015-.journal_article" docStyleVersion="1" docTitle="Crocidura suaveolens subsp. gueldenstaedtii" docType="treatment" docVersion="5" lastPageNumber="86" masterDocId="FF93113EB369C6231E712B0FFFD04A15" masterDocTitle="Molecular relationships of the Israeli shrews (Eulipotyphla: Soricidae) based on cytochrome b sequences" masterLastPageNumber="89" masterPageNumber="79" pageNumber="86" updateTime="1683049283606" updateUser="ExternalLinkService">
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<mods:titleInfo>
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<mods:title>Molecular relationships of the Israeli shrews (Eulipotyphla: Soricidae) based on cytochrome b sequences</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Shpirer, Erez</mods:namePart>
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<mods:name type="personal">
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Haddas-Sasson, Michal</mods:namePart>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Spivak-Glater, Maya</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Feldstein, Tamar</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Meiri, Shai</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Huchon, Dorothée</mods:namePart>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:relatedItem type="host">
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<mods:titleInfo>
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<mods:title>Mammalia</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2021</mods:date>
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<mods:detail type="series">
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<mods:title>Warsaw, Poland</mods:title>
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</mods:detail>
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<mods:detail type="pubDate">
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<mods:number>2020-08-17</mods:number>
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</mods:detail>
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<mods:detail type="volume">
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<mods:number>85</mods:number>
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</mods:detail>
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<mods:detail type="issue">
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<mods:number>1</mods:number>
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<mods:extent unit="page">
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<mods:start>79</mods:start>
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<mods:end>89</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:location>
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<mods:url>http://dx.doi.org/10.1515/mammalia-2019-0143</mods:url>
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</mods:location>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">10.1515/mammalia-2019-0143</mods:identifier>
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<mods:identifier type="GBIF-Dataset">b8852ae2-e3de-4ffa-b81c-9ea10f59a4f0</mods:identifier>
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<mods:identifier type="ISSN">1864-1547</mods:identifier>
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<mods:identifier type="Zenodo-Dep">7837749</mods:identifier>
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<treatment ID-DOI="http://doi.org/10.5281/zenodo.7887387" ID-Zenodo-Dep="7887387" LSID="urn:lsid:plazi:treatment:03AA6946B36EC62B1D492D6AFE1748EA" httpUri="http://treatment.plazi.org/id/03AA6946B36EC62B1D492D6AFE1748EA" lastPageId="8" lastPageNumber="86" pageId="7" pageNumber="86">
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<subSubSection box="[824,1402,1636,1667]" pageId="7" pageNumber="86" type="nomenclature">
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<paragraph blockId="7.[824,1402,1636,1667]" box="[824,1402,1636,1667]" pageId="7" pageNumber="86">
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<heading bold="true" box="[824,1402,1636,1667]" fontSize="12" level="2" pageId="7" pageNumber="86" reason="2">
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<emphasis bold="true" box="[824,1402,1636,1667]" pageId="7" pageNumber="86">
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4.3
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<taxonomicName ID-CoL="ZK4V" baseAuthorityName="Pallas" baseAuthorityYear="1811" box="[884,1402,1636,1667]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="7" pageNumber="86" phylum="Chordata" rank="subSpecies" species="suaveolens" subSpecies="gueldenstaedtii">
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<emphasis bold="true" box="[884,1402,1636,1667]" italics="true" pageId="7" pageNumber="86">Crocidura suaveolens gueldenstaedtii</emphasis>
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</taxonomicName>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection lastPageId="8" lastPageNumber="87" pageId="7" pageNumber="86" type="description">
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<paragraph blockId="7.[824,1452,1712,1941]" lastBlockId="8.[136,764,191,767]" lastPageId="8" lastPageNumber="87" pageId="7" pageNumber="86">
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The phylogenetic analysis indicated that all Israeli “
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<emphasis bold="true" box="[836,992,1745,1769]" italics="true" pageId="7" pageNumber="86">
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<taxonomicName box="[836,980,1745,1769]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="7" pageNumber="86" phylum="Chordata" rank="species" species="suaveolens">C. suaveolens</taxonomicName>
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”
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</emphasis>
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sequences are part of clade V – the ‘
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<taxonomicName baseAuthorityName="Pallas" baseAuthorityYear="1811" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="7" pageNumber="86" phylum="Chordata" rank="species" species="gueldenstaedtii">
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<emphasis bold="true" italics="true" pageId="7" pageNumber="86">gueldenstaedtii</emphasis>
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</taxonomicName>
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’ clade (
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<bibRefCitation author="Dubey, S. & Cosson, J. F. & Magnanou, E. & Vohralik, V. & Benda, P. & Frynta, D. & Hutterer, R. & Vogel, V. & Vogel, P." box="[1033,1249,1781,1803]" pageId="7" pageNumber="86" pagination="3438 - 3452" refId="ref8527" refString="Dubey, S., Cosson, J. F., Magnanou, E., Vohralik, V., Benda, P., Frynta, D., Hutterer, R., Vogel, V., and Vogel, P. (2007 a). Mediterranean populations of the lesser white-toothed shrew (Crocidura suaveolens group): an unexpected puzzle of Pleistocene survivors and prehistoric introductions. Mol. Ecol. 16: 3438 - 3452." type="journal article" year="2007">Dubey et al. 2007a</bibRefCitation>
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), and close to the Turkish and Georgian sequences (
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<figureCitation box="[1197,1290,1816,1838]" captionStart="Figure 5" captionStartId="6.[794,851,1275,1294]" captionTargetBox="[794,1419,191,1236]" captionTargetId="figure-260@6.[794,1419,191,1236]" captionTargetPageId="6" captionText="Figure 5: Maximum likelihood tree of Suncus cytb sequences. Phylogenetic relationships inferred from a matrix of 1,140 nucleotide positions for 36 individuals. Maximum likelihood bootstrap supports above 50% and Bayesian posterior probabilities above 0.70 are indicated near the corresponding node separated with a slash. Sequences obtained in this work are indicated in bold. Authors of sequence data in Supplementary Table S6." figureDoi="http://doi.org/10.5281/zenodo.7837761" httpUri="https://zenodo.org/record/7837761/files/figure.png" pageId="7" pageNumber="86">Figure 5</figureCitation>
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). While the Israeli populations represent the edge of this species complex range, they do not present a mitochondrial genetic difference from the rest of its clade, unlike the situation in
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<taxonomicName baseAuthorityName="Hermann" baseAuthorityYear="1780" box="[136,258,191,215]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="8" pageNumber="87" phylum="Chordata" rank="species" species="leucodon">
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<emphasis bold="true" box="[136,258,191,215]" italics="true" pageId="8" pageNumber="87">C. leucodon</emphasis>
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</taxonomicName>
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. This may be due to their larger population size and wider range in
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<collectingCountry box="[350,410,227,249]" name="Israel" pageId="8" pageNumber="87">Israel</collectingCountry>
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compared to that of
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<taxonomicName baseAuthorityName="Hermann" baseAuthorityYear="1780" box="[639,763,225,249]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="8" pageNumber="87" phylum="Chordata" rank="species" species="leucodon">
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<emphasis bold="true" box="[639,763,225,249]" italics="true" pageId="8" pageNumber="87">C. leucodon</emphasis>
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</taxonomicName>
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(
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<figureCitation box="[143,251,262,284]" captionStart="Figure 1" captionStartId="2.[1016,1073,1451,1470]" captionTargetBox="[136,986,1355,1904]" captionTargetId="figure-558@2.[136,986,1355,1904]" captionTargetPageId="2" captionText="Figure 1: Shrew sample locations. A. samples sequenced in this work. B. shrew specimen present in the Steinhardt National Collection of Natural History, Zoological Museum at Tel Aviv University (Israel). The two major biomes of Israel: the Mediterranean biome, and the desert, are indicated in green and yellow,respectively. Red squares, blues stars, green circles and black triangles indicate C. ramona, S. etruscus, C. suaveolens gueldenstaedtii and C. leucodon specimen respectively.The museum records encompass 79 C. leucodon, 594 C. suaveolens gueldenstaedtii, 13 C. ramona and 443 S. etruscus." figureDoi="http://doi.org/10.5281/zenodo.7837751" httpUri="https://zenodo.org/record/7837751/files/figure.png" pageId="8" pageNumber="87">Figure 1B</figureCitation>
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). However, it is also possible that genetic differences exist in the nuclear genome. Based on the high similarity between the Israeli and Balkan sequences we agree with the status of “least concern” listed by the IUCN (
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<bibRefCitation author="Palomo, L. & KryStufek, B. & Amori, G. & Hutterer, R." box="[143,352,400,422]" pageId="8" pageNumber="87" refId="ref10017" refString="Palomo, L., KryStufek, B., Amori, G., and Hutterer, R. (2016). Crocidura suaveolens. The IUCN Red List of Threatened Species 2016." type="book" year="2016">Palomo et al. 2016</bibRefCitation>
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). Our molecular cyt
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<emphasis bold="true" box="[576,590,399,422]" italics="true" pageId="8" pageNumber="87">b</emphasis>
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data unequivocally place Israeli
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<emphasis bold="true" box="[365,494,433,456]" italics="true" pageId="8" pageNumber="87">‘suaveolens’</emphasis>
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specimens within the ‘
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<emphasis bold="true" box="[143,312,468,491]" italics="true" pageId="8" pageNumber="87">gueldenstaedtii’</emphasis>
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clade. The specific status of the form awaits a thorough taxonomic revision, including an examination of animals from the
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<typeStatus box="[483,530,538,559]" pageId="8" pageNumber="87">type</typeStatus>
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localities, preferably alongside specimens from the
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<typeStatus box="[498,545,573,594]" pageId="8" pageNumber="87">type</typeStatus>
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localities of other members of the complex (e.g.,
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<emphasis bold="true" italics="true" pageId="8" pageNumber="87">
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C. ‘gmelini’,
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<taxonomicName class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="8" pageNumber="87" phylum="Chordata" rank="subSpecies" species="suaveolens" subSpecies="monacha">C. suaveolens monacha</taxonomicName>
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,
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<taxonomicName authorityName="Thomas" authorityYear="1920" box="[250,349,640,664]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="8" pageNumber="87" phylum="Chordata" rank="species" species="portali">C. portali</taxonomicName>
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</emphasis>
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) as well as phylogenetic information from nuclear markers. Until such a study is carried out, we tentatively refer to Israeli specimens as members of
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<taxonomicName box="[136,448,743,767]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="8" pageNumber="87" phylum="Chordata" rank="subSpecies" species="suaveolens" subSpecies="gueldenstaedtii">
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<emphasis bold="true" box="[136,448,743,767]" italics="true" pageId="8" pageNumber="87">C. suaveolens gueldenstaedtii</emphasis>
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</taxonomicName>
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.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |