treatments-xml/data/03/AA/69/03AA6946B36EC6241D492915FB364C0B.xml
2024-06-21 12:22:17 +02:00

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<document ID-DOI="10.1515/mammalia-2019-0143" ID-ISSN="1864-1547" ID-Zenodo-Dep="7837749" IM.bibliography_approvedBy="tatiana" IM.illustrations_approvedBy="tatiana" IM.tables_approvedBy="tatiana" IM.taxonomicNames_approvedBy="tatiana" IM.treatments_approvedBy="tatiana" checkinTime="1681741835796" checkinUser="felipe" docAuthor="Shpirer, Erez, Haddas-Sasson, Michal, Spivak-Glater, Maya, Feldstein, Tamar, Meiri, Shai &amp; Huchon, Dorothée" docDate="2021" docId="03AA6946B36EC6241D492915FB364C0B" docLanguage="en" docName="Mammalia.85.1.79-89.pdf" docOrigin="Mammalia (Warsaw, Poland) 85 (1)" docSource="http://dx.doi.org/10.1515/mammalia-2019-0143" docStyle="DocumentStyle:6C173CCC1D5EC0136B755626151D98B6.1:Mammalia.2015-.journal_article" docStyleId="6C173CCC1D5EC0136B755626151D98B6" docStyleName="Mammalia.2015-.journal_article" docStyleVersion="1" docTitle="Crocidura leucodon" docType="treatment" docVersion="4" lastPageNumber="86" masterDocId="FF93113EB369C6231E712B0FFFD04A15" masterDocTitle="Molecular relationships of the Israeli shrews (Eulipotyphla: Soricidae) based on cytochrome b sequences" masterLastPageNumber="89" masterPageNumber="79" pageNumber="86" updateTime="1682415572525" updateUser="ExternalLinkService">
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<mods:title>Molecular relationships of the Israeli shrews (Eulipotyphla: Soricidae) based on cytochrome b sequences</mods:title>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Shpirer, Erez</mods:namePart>
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<mods:namePart>Haddas-Sasson, Michal</mods:namePart>
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<mods:namePart>Spivak-Glater, Maya</mods:namePart>
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<mods:namePart>Feldstein, Tamar</mods:namePart>
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<mods:namePart>Meiri, Shai</mods:namePart>
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<mods:namePart>Huchon, Dorothée</mods:namePart>
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<mods:title>Warsaw, Poland</mods:title>
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<mods:number>2020-08-17</mods:number>
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<mods:number>85</mods:number>
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<paragraph blockId="7.[824,1151,536,567]" box="[824,1151,536,567]" pageId="7" pageNumber="86">
<heading bold="true" box="[824,1151,536,567]" fontSize="12" level="2" pageId="7" pageNumber="86" reason="2">
<emphasis bold="true" box="[824,1151,536,567]" pageId="7" pageNumber="86">
4.2
<taxonomicName ID-CoL="ZK5J" ID-ENA="109474" baseAuthorityName="Hermann" baseAuthorityYear="1780" box="[885,1151,536,567]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="7" pageNumber="86" phylum="Chordata" rank="species" species="leucodon">
<emphasis bold="true" box="[885,1151,536,567]" italics="true" pageId="7" pageNumber="86">Crocidura leucodon</emphasis>
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<paragraph blockId="7.[824,1452,612,1567]" pageId="7" pageNumber="86">
The phylogenetic reconstruction indicates that the Israeli
<taxonomicName baseAuthorityName="Hermann" baseAuthorityYear="1780" box="[824,950,645,669]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="7" pageNumber="86" phylum="Chordata" rank="species" species="leucodon">
<emphasis bold="true" box="[824,950,645,669]" italics="true" pageId="7" pageNumber="86">C. leucodon</emphasis>
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forms a distinct clade related to the eastern clade (
<figureCitation box="[897,992,681,703]" captionStart="Figure 4" captionStartId="6.[136,193,1218,1237]" captionTargetBox="[136,762,191,1179]" captionTargetId="figure-195@6.[136,762,191,1179]" captionTargetPageId="6" captionText="Figure 4: Maximum likelihood tree of Crocidura suaveolens complex cytb sequences. Phylogenetic relationships inferred from a matrix of 996 nucleotide positions for 215 individuals. Maximum likelihood bootstrap supports above 50% and Bayesian posterior probabilities above 0.70 are indicated near the corresponding node separated with a slash. Sequences obtained in this work are indicated in bold. Authors of sequence data in Supplementary Table S5." figureDoi="http://doi.org/10.5281/zenodo.7837759" httpUri="https://zenodo.org/record/7837759/files/figure.png" pageId="7" pageNumber="86">Figure 4</figureCitation>
,
<bibRefCitation author="Dubey, S. &amp; Cosson, J. F. &amp; Vohralik, V. &amp; KryStufek, B. &amp; Diker, E. &amp; Vogel, P." box="[1004,1216,681,703]" pageId="7" pageNumber="86" refId="ref8612" refString="Dubey, S., Cosson, J. F., Vohralik, V., KryStufek, B., Diker, E., and Vogel, P. (2007 b). Molecular evidence of Pleistocene bidirectional faunal exchange between Europe and the Near East: the case of the bicoloured shrew (Crocidura leucodon, Soricidae). J. Evol." type="book" year="2007">Dubey et al. 2007b</bibRefCitation>
). The different
<taxonomicName baseAuthorityName="Hermann" baseAuthorityYear="1780" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="7" pageNumber="86" phylum="Chordata" rank="species" species="leucodon">
<emphasis bold="true" italics="true" pageId="7" pageNumber="86">C. leucodon</emphasis>
</taxonomicName>
clades have been suggested to have diverged during the Pleistocene glaciations (
<bibRefCitation author="Dubey, S. &amp; Cosson, J. F. &amp; Vohralik, V. &amp; KryStufek, B. &amp; Diker, E. &amp; Vogel, P." box="[1122,1325,750,772]" pageId="7" pageNumber="86" refId="ref8612" refString="Dubey, S., Cosson, J. F., Vohralik, V., KryStufek, B., Diker, E., and Vogel, P. (2007 b). Molecular evidence of Pleistocene bidirectional faunal exchange between Europe and the Near East: the case of the bicoloured shrew (Crocidura leucodon, Soricidae). J. Evol." type="book" year="2007">Dubey et al. 2007b</bibRefCitation>
;
<bibRefCitation author="Mahmoudi, A. &amp; Darvish, J. &amp; Siahsarvie, R. &amp; Dubey, S. &amp; KryStufek, B." pageId="7" pageNumber="86" pagination="160 - 163" refId="ref9389" refString="Mahmoudi, A., Darvish, J., Siahsarvie, R., Dubey, S., and KryStufek, B. (2019). Mitochondrial sequences retrieve an ancient lineage of bicolored shrew in the Hyrcanian refugium. Mamm. Biol. 95: 160 - 163." type="journal article" year="2019">Mahmoudi et al. 2019</bibRefCitation>
). It is unlikely however that the Israeli clade corresponds to a fourth refugium from the Ice Age. Rather, the observed mitochondrial genetic divergence is possibly the result of the edge position of the Israeli population at the southernmost part of the
<taxonomicName baseAuthorityName="Hermann" baseAuthorityYear="1780" box="[1146,1270,921,945]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="7" pageNumber="86" phylum="Chordata" rank="species" species="leucodon">
<emphasis bold="true" box="[1146,1270,921,945]" italics="true" pageId="7" pageNumber="86">C. leucodon</emphasis>
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range. In agreement,
<bibRefCitation author="Mendelssohn, H. &amp; Yom-Tov, Y." box="[893,1260,958,980]" pageId="7" pageNumber="86" refId="ref9743" refString="Mendelssohn, H., and Yom-Tov, Y. (1999). Fauna Palaestina: Mammalia of Israel. Jerusalem: The Israel Academy of Sciences and Humanities, pp. 439." type="journal volume" year="1999">Mendelssohn and Yom-Tov (1999)</bibRefCitation>
noted that
<taxonomicName baseAuthorityName="Hermann" baseAuthorityYear="1780" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="7" pageNumber="86" phylum="Chordata" rank="species" species="leucodon">
<emphasis bold="true" italics="true" pageId="7" pageNumber="86">C. leucodon</emphasis>
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is less abundant than
<emphasis bold="true" box="[1146,1370,990,1014]" italics="true" pageId="7" pageNumber="86">
C. s.
<taxonomicName baseAuthorityName="Pallas" baseAuthorityYear="1811" box="[1202,1366,991,1014]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="7" pageNumber="86" phylum="Chordata" rank="species" species="gueldenstaedtii">gueldenstaedtii</taxonomicName>
,
</emphasis>
basing their conclusion on the number of shrews deposited in museum collections. The current data available at the Steinhardt Museum of Natural History support the view that the range of
<taxonomicName baseAuthorityName="Hermann" baseAuthorityYear="1780" box="[1016,1140,1128,1152]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="7" pageNumber="86" phylum="Chordata" rank="species" species="leucodon">
<emphasis bold="true" box="[1016,1140,1128,1152]" italics="true" pageId="7" pageNumber="86">C. leucodon</emphasis>
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is more limited than that of
<taxonomicName box="[824,967,1163,1187]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="7" pageNumber="86" phylum="Chordata" rank="species" species="suaveolens">
<emphasis bold="true" box="[824,967,1163,1187]" italics="true" pageId="7" pageNumber="86">C. suaveolens</emphasis>
</taxonomicName>
in
<collectingCountry box="[1000,1063,1165,1187]" name="Israel" pageId="7" pageNumber="86">Israel</collectingCountry>
, since
<taxonomicName baseAuthorityName="Hermann" baseAuthorityYear="1780" box="[1136,1259,1163,1187]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="7" pageNumber="86" phylum="Chordata" rank="species" species="leucodon">
<emphasis bold="true" box="[1136,1259,1163,1187]" italics="true" pageId="7" pageNumber="86">C. leucodon</emphasis>
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samples are rarer in the collection (79
<taxonomicName baseAuthorityName="Hermann" baseAuthorityYear="1780" box="[1040,1136,1198,1221]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="7" pageNumber="86" phylum="Chordata" rank="species" species="leucodon">
<emphasis bold="true" box="[1040,1136,1198,1221]" italics="true" pageId="7" pageNumber="86">leucodon</emphasis>
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vs. 594
<taxonomicName box="[1220,1336,1198,1221]" class="Mammalia" family="Soricidae" genus="Crocidura" kingdom="Animalia" order="Soricomorpha" pageId="7" pageNumber="86" phylum="Chordata" rank="species" species="suaveolens">
<emphasis bold="true" box="[1220,1336,1198,1221]" italics="true" pageId="7" pageNumber="86">suaveolens</emphasis>
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), and with one exception, restricted to the Mediterranean biome (
<figureCitation box="[831,943,1269,1291]" captionStart="Figure 1" captionStartId="2.[1016,1073,1451,1470]" captionTargetBox="[136,986,1355,1904]" captionTargetId="figure-558@2.[136,986,1355,1904]" captionTargetPageId="2" captionText="Figure 1: Shrew sample locations. A. samples sequenced in this work. B. shrew specimen present in the Steinhardt National Collection of Natural History, Zoological Museum at Tel Aviv University (Israel). The two major biomes of Israel: the Mediterranean biome, and the desert, are indicated in green and yellow,respectively. Red squares, blues stars, green circles and black triangles indicate C. ramona, S. etruscus, C. suaveolens gueldenstaedtii and C. leucodon specimen respectively.The museum records encompass 79 C. leucodon, 594 C. suaveolens gueldenstaedtii, 13 C. ramona and 443 S. etruscus." figureDoi="http://doi.org/10.5281/zenodo.7837751" httpUri="https://zenodo.org/record/7837751/files/figure.png" pageId="7" pageNumber="86">Figure 1B</figureCitation>
). Edge populations have been suggested to harbor adaptive traits and genetic variability that may be important when considering future conservation needs (
<bibRefCitation author="Hampe, A. &amp; Petit, R. J." box="[831,1077,1372,1394]" pageId="7" pageNumber="86" pagination="461 - 467" refId="ref8851" refString="Hampe, A., and Petit, R. J. (2005). Conserving biodiversity under climate change: the rear edge matters. Ecol. Lett. 8: 461 - 467." type="journal article" year="2005">Hampe and Petit 2005</bibRefCitation>
;
<bibRefCitation author="Matyas, C. &amp; Vendramin, G. G. &amp; Fady, B." box="[1089,1292,1372,1394]" pageId="7" pageNumber="86" refId="ref9442" refString="Matyas, C., Vendramin, G. G., and Fady, B. (2009). Forests at the limit: evolutionary - genetic consequences of environmental changes at the receding (xeric) edge of distribution. Report from a research workshop. Ann. For. Sci. 66, https: // doi. org / 10.1051 / forest / 2009081." type="proceedings" year="2009">Mátýas et al. 2009</bibRefCitation>
). We thus also recommend that further population and genomic studies be carried out on this species, since its population status is currently unknown (
<bibRefCitation author="Shenbrot, G. &amp; Hutterer, R. &amp; Amori, G. &amp; KryStufek, B. &amp; Yigit, N. &amp; Mitsain, G. &amp; Palomo, L. J." box="[1045,1263,1476,1498]" pageId="7" pageNumber="86" refId="ref10256" refString="Shenbrot, G., Hutterer, R., Amori, G., KryStufek, B., Yigit, N., Mitsain, G., and Palomo, L. J. (2016). Crocidura leucodon. The IUCN Red List of Threatened Species 2016. e. T 29651 A 115169304." type="journal volume" year="2016">Shenbrot et al. 2016</bibRefCitation>
), and assessment from museum collections alone may provide a biased representation of the population status.
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