147 lines
15 KiB
XML
147 lines
15 KiB
XML
<document id="6974A00B75B79EDD2C54A1BC626107B1" ID-CLB-Dataset="20551" ID-DOI="10.1099/ijsem.0.001722" ID-GBIF-Dataset="adc6df4e-de11-4581-b9bc-3b05f358068a" ID-ISSN="1466-5034" ID-Zenodo-Dep="6223700" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1645465576387" checkinUser="felipe" docAuthor="Lee, Dongwook, Jang, Jun Hyeong, Cha, Seho & Seo, Taegun" docDate="2017" docId="C9081C02FFF4FFADFCD6D2259D56FA16" docLanguage="en" docName="IntJSystEvolMicrobiol.67.4.951-955.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 67 (4)" docSource="http://dx.doi.org/10.1099/ijsem.0.001722" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Lysobacter humi Lee & Jang & Cha & Seo 2017, SP. NOV." docType="treatment" docVersion="8" lastPageNumber="954" masterDocId="3531647AFFF6FFAEFFEDD5299C20FF90" masterDocTitle="Lysobacter humi sp. nov., isolated from soil" masterLastPageNumber="955" masterPageNumber="951" pageNumber="953" updateTime="1699315810921" updateUser="ExternalLinkService">
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<mods:title id="8345C3B1F05284325FB079D6D1725A5E">Lysobacter humi sp. nov., isolated from soil</mods:title>
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<mods:namePart id="EABDB4B97D63D2FF7E2A925FC289676C">Lee, Dongwook</mods:namePart>
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<mods:namePart id="FC439391D522A1B00C97A321209A66A3">Jang, Jun Hyeong</mods:namePart>
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<mods:namePart id="D205DD1096F3B6971187B45581F2746A">Cha, Seho</mods:namePart>
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<mods:namePart id="A808D0FA1DDA6ED2625B0D29F1A4A9E6">Seo, Taegun</mods:namePart>
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<mods:title id="90E7B49538111373A224C5FF4E3D5ABB">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:part id="5105CE825409C43563CD0D43AC3A60F5">
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<mods:date id="9EFB78EF83489A0497E7786254E7BBF7">2017</mods:date>
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<treatment id="C9081C02FFF4FFADFCD6D2259D56FA16" ID-DOI="http://doi.org/10.5281/zenodo.6314460" ID-GBIF-Taxon="193422818" ID-Zenodo-Dep="6314460" LSID="urn:lsid:plazi:treatment:C9081C02FFF4FFADFCD6D2259D56FA16" httpUri="http://treatment.plazi.org/id/C9081C02FFF4FFADFCD6D2259D56FA16" lastPageId="3" lastPageNumber="954" pageId="2" pageNumber="953">
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<subSubSection id="09BBFE9FFFF4FFACFCD6D2259999F8B9" box="[827,1465,1804,1833]" pageId="2" pageNumber="953" type="nomenclature">
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<paragraph id="411EAD14FFF4FFACFCD6D2259999F8B9" blockId="2.[827,1465,1804,1949]" box="[827,1465,1804,1833]" pageId="2" pageNumber="953">
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<heading id="1A561A78FFF4FFACFCD6D2259999F8B9" allCaps="true" bold="true" box="[827,1465,1804,1833]" centered="true" fontSize="12" level="2" pageId="2" pageNumber="953" reason="3">
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<emphasis id="73D57106FFF4FFACFCD6D2259999F8B9" bold="true" box="[827,1465,1804,1833]" pageId="2" pageNumber="953">
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DESCRIPTION OF
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<taxonomicName id="86A1D697FFF4FFACFBDDD2259914F8B9" authority="Lee & Jang & Cha & Seo, 2017" authorityName="Lee & Jang & Cha & Seo" authorityYear="2017" box="[1072,1332,1804,1833]" class="Gammaproteobacteria" family="Lysobacteraceae" genus="Lysobacter" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lysobacterales" pageId="2" pageNumber="951" phylum="Proteobacteria" rank="species" species="humi" status="sp. nov.">
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<emphasis id="73D57106FFF4FFACFBDDD2259914F8B9" bold="true" box="[1072,1332,1804,1833]" italics="true" pageId="2" pageNumber="953">LYSOBACTER HUMI</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="68E6CC7DFFF4FFACFAD0D2259999F8B9" box="[1341,1465,1804,1833]" pageId="2" pageNumber="953" rank="species">SP. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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<subSubSection id="09BBFE9FFFF4FFACFCD6D2119917F8C0" box="[827,1335,1846,1872]" pageId="2" pageNumber="953" type="etymology">
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<paragraph id="411EAD14FFF4FFACFCD6D2119917F8C0" blockId="2.[827,1465,1804,1949]" box="[827,1335,1846,1872]" pageId="2" pageNumber="953">
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<taxonomicName id="86A1D697FFF4FFACFCD6D2119FC8F8C0" authorityName="Lee & Jang & Cha & Seo" authorityYear="2017" box="[827,1000,1848,1872]" class="Gammaproteobacteria" family="Lysobacteraceae" genus="Lysobacter" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lysobacterales" pageId="2" pageNumber="953" phylum="Proteobacteria" rank="species" species="humi">
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<emphasis id="73D57106FFF4FFACFCD6D2119FC8F8C0" box="[827,1000,1848,1872]" italics="true" pageId="2" pageNumber="953">Lysobacter humi</emphasis>
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</taxonomicName>
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(hu′ mi. L. gen. n.
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<taxonomicName id="86A1D697FFF4FFACFB47D21198C2F8C0" authorityName="Lee & Jang & Cha & Seo" authorityYear="2017" box="[1194,1250,1848,1872]" class="Gammaproteobacteria" family="Lysobacteraceae" genus="Lysobacter" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lysobacterales" pageId="2" pageNumber="953" phylum="Proteobacteria" rank="species" species="humi">
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<emphasis id="73D57106FFF4FFACFB47D21198C2F8C0" box="[1194,1250,1848,1872]" italics="true" pageId="2" pageNumber="953">humi</emphasis>
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</taxonomicName>
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of soil).
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</paragraph>
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<subSubSection id="09BBFE9FFFF4FFADFCD6D24F9D79FB6C" lastPageId="3" lastPageNumber="954" pageId="2" pageNumber="953" type="description">
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<paragraph id="411EAD14FFF4FFADFCD6D24F9D79FB6C" blockId="2.[827,1465,1804,1949]" lastBlockId="3.[121,760,182,1414]" lastPageId="3" lastPageNumber="954" pageId="2" pageNumber="953">
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Cells are Gram-reaction-negative, strictly aerobic, nonmotile, non-flagellated and rod-shaped with dimensions in the range 0.7–1.0×1.3–1.5 µm. Colonies on R2A are round, convex, transparent and yellow in colour after incubation at 30
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<superScript id="B6D4005CFFF5FFADFF7AD5D89CBEFF6C" attach="right" box="[151,158,241,252]" fontSize="6" pageId="3" pageNumber="954">Ǫ</superScript>
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C for 2 days. The growth ranges by temperature, pH and NaCl concentration are 20–42
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<superScript id="B6D4005CFFF5FFADFE12D4399E26FE8B" attach="right" box="[511,518,272,283]" fontSize="6" pageId="3" pageNumber="954">Ǫ</superScript>
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C, pH 7.0–9.0 and 0– 0.5 % (w/v) NaCl, respectively, with optimum growth at 30
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<superScript id="B6D4005CFFF5FFADFF7AD4649CBEFEC8" attach="right" box="[151,158,333,344]" fontSize="6" pageId="3" pageNumber="954">Ǫ</superScript>
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C, pH 8.0 and 0 % (w/v) NaCl, respectively. Growth occurs on nutrient agar and R2A agar. Oxidase and catalase tests are positive. According to API 20NE, cells are positive for gelatin hydrolysis and aesculin hydrolysis, but negative for nitrate reduction, glucose fermentation, arginine dihydrolase activity, indole production and urea hydrolysis. Cells show activities for acid phosphatase, alkaline phosphatase, esterase (C4), esterase lipase (C8), leucine arylamidase, lipase (C14), naphthol-AS-BI-phosphohydrolase, trypsin, valine arylamidase and a- chymotrypsin. Cells show no activity for cystine arylamidase,
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<emphasis id="73D57106FFF5FFADFE1CD7A89E24FD08" box="[497,516,641,664]" italics="true" pageId="3" pageNumber="954">N</emphasis>
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-acetyl-b- glucosaminidase, a- fucosidase, a- galactosidase, a- glucosidase, a- mannosidase, b- galactosidase (ONPG), b- glucosidase or b- glucuronidase. Cells do not assimilate the following compounds: acetate, adipate, alanine, capric acid, citric acid, D- glucose, D- mannitol, D- mannose, D- sorbitol, gluconate, glycogen, inositol, itaconic acid, lactic acid, L- arabinose, L- fucose, L- histidine, L- rhamnose, L- serine, malic acid, malonic acid, maltose, melibiose,
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<emphasis id="73D57106FFF5FFADFE30D65F9DD0FC1D" box="[477,496,886,909]" italics="true" pageId="3" pageNumber="954">N</emphasis>
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-acetylglucosamine, phenylacetic acid,
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<emphasis id="73D57106FFF5FFADFE84D6BD9D56FC3B" box="[361,374,916,939]" italics="true" pageId="3" pageNumber="954">p</emphasis>
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-nitrophenyl-b- D- galactopyranoside (PNPG), potassium 2-ketogluconate, proline, propionic acid, ribose, salicin, suberic acid, sucrose, valeric acid, 3- hydroxybenzoic acid, 3-hydroxybutyric acid, 4-hydroxybenzoic acid or 5-ketogluconate (API 20 NE and API ID 32GN). The only isoprenoid quinone is ubiquinone Q-8. The most abundant cellular fatty acids are iso-C
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, summed feature 9 (iso-C
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<emphasis id="73D57106FFF5FFADFE5AD1599DE7FB12" box="[439,455,1136,1154]" italics="true" pageId="3" pageNumber="954">Ɯ</emphasis>
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9
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<emphasis id="73D57106FFF5FFADFE39D1439DFEFB11" box="[468,478,1130,1153]" italics="true" pageId="3" pageNumber="954">c</emphasis>
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and/or C
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10-methyl) and iso-C
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. Polar lipids comprise phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, an unidentified phospholipid and two unidentified aminophospholipids.
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</paragraph>
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</subSubSection>
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<subSubSection id="09BBFE9FFFF5FFADFF94D03B9D56FA16" pageId="3" pageNumber="954" type="materials_examined">
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<paragraph id="411EAD14FFF5FFADFF94D03B9D56FA16" blockId="3.[121,760,182,1414]" pageId="3" pageNumber="954">
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<materialsCitation id="F1C9A749FFF5FFADFF94D03B9D56FA16" ID-GBIF-Occurrence="3470062301" accessionNumber="JCM 31019" collectionCode="T, JCM" collectorName="The G" country="South Korea" location="Gyeonggi Province" pageId="3" pageNumber="954" specimenCode="FJY8T" stateProvince="Gyeonggi" typeStatus="holotype">
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The
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<typeStatus id="9E1A13B6FFF5FFADFF41D03A9CF9FABB" box="[172,217,1299,1323]" pageId="3" pageNumber="954">type</typeStatus>
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strain, FJY8
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(=
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<specimenCode id="1107056FFFF5FFADFE6ED03B9E35FABA" box="[387,533,1298,1322]" collectionCode="KCTC" country="South Korea" httpUri="http://grbio.org/cool/2inw-p49s" name="Korean Collection for Type Cultures" pageId="3" pageNumber="954">KCTC 42810</specimenCode>
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<collectionCode id="27B035D1FFF5FFADFDF8D0259E01FA8D" box="[533,545,1292,1309]" name="Tavera, Department of Geology and Geophysics" pageId="3" pageNumber="954">T</collectionCode>
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</superScript>
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=
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<collectionCode id="27B035D1FFF5FFADFDC3D03B9E41FABA" box="[558,609,1298,1322]" country="Japan" httpUri="http://grbio.org/cool/iyky-md37" name="Japan Collection of Microorganisms" pageId="3" pageNumber="954">JCM</collectionCode>
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31019
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<superScript id="B6D4005CFFF5FFADFD46D0259E97FA8D" attach="none" box="[683,695,1292,1309]" fontSize="7" pageId="3" pageNumber="954">
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<collectionCode id="27B035D1FFF5FFADFD46D0259E97FA8D" box="[683,695,1292,1309]" name="Tavera, Department of Geology and Geophysics" pageId="3" pageNumber="954">T</collectionCode>
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</superScript>
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), was isolated from an arid area in Goyang,
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<collectingRegion id="836563F6FFF5FFADFDC9D0189ED3FAD9" box="[548,755,1329,1353]" country="South Korea" name="Gyeonggi" pageId="3" pageNumber="954">Gyeonggi Province</collectingRegion>
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,
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<collectingCountry id="39B6ED84FFF5FFADFF94D0669CDFFAF7" box="[121,255,1359,1383]" name="South Korea" pageId="3" pageNumber="954">South Korea</collectingCountry>
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.
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<collectorName id="EC54C8C2FFF5FFADFEE4D0669D6CFAF8" box="[265,332,1359,1384]" pageId="3" pageNumber="954">The G</collectorName>
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+C content of genomic DNA of the type strain is 68.0±0.4 mol%.
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</materialsCitation>
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |