160 lines
14 KiB
XML
160 lines
14 KiB
XML
<document id="72BEF57B5AB35C3E3AC74EC63F8E0D3A" ID-DOI="10.1099/ijsem.0.003847" ID-GBIF-Dataset="8378fda1-7808-476f-9c03-b551204b03e6" ID-ISSN="1466-5034" ID-Zenodo-Dep="3745040" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1586370151274" checkinUser="felipe" docAuthor="Zhang, Gaiyun, Wang, Lina, Xie, Fuquan, Pei, Shengxiang & Jiang, Li" docDate="2020" docId="03ED97173551FFC1FCD2FA4660812576" docLanguage="en" docName="IntJouSysEvoMicro.70.923-928.pdf.imf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 70 (2)" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Nesterenkonia sphaerica Zhang, Wang, Xie, Pei & Jiang, 2020, SP. NOV." docType="treatment" docVersion="10" lastPageNumber="927" masterDocId="FFD4EF6F3552FFC5FFEEFFFD6109263B" masterDocTitle="Nesterenkonia salmonea sp. nov. and Nesterenkonia sphaerica sp. nov., isolated from the Southern Atlantic Ocean" masterLastPageNumber="928" masterPageNumber="923" pageNumber="926" updateTime="1698736592305" updateUser="plazi" zenodo-license-document="CC-BY-4.0">
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<mods:mods id="8D5CFDCA2D0FE0A28CA420730C99F2C6" xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo id="E66C1CC5B9C78A88FED1FC939A2E3C55">
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<mods:title id="8F0D6D08AFFAFED925DBFFB6B5CCF8EB">Nesterenkonia salmonea sp. nov. and Nesterenkonia sphaerica sp. nov., isolated from the Southern Atlantic Ocean</mods:title>
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<mods:name id="6E164AB40A0BF9F407E89E5A0F390A14" type="personal">
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<mods:namePart id="5437AB6D0BBC226E4CD4AB9F340AC993">Zhang, Gaiyun</mods:namePart>
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<mods:name id="4A304B5B8EE63A0598D7613B588734A9" type="personal">
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<mods:roleTerm id="E4829100FA84DD297A567EC11DF11C66">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="BC916988AE11CC28D2BF5F8D432EBBF2">Wang, Lina</mods:namePart>
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</mods:name>
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<mods:name id="8BA56FD23C430715FBC71E8DBD9564D7" type="personal">
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<mods:roleTerm id="B2B76B3C9B8FB0214BF074AAB684A3C5">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="98CC1506A7A59F2EE4C1AC705BCC9C09">Xie, Fuquan</mods:namePart>
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</mods:name>
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<mods:name id="84DB372347EB2CF4A0C5221F160C2F77" type="personal">
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<mods:roleTerm id="EA58C815ABE6E6E3ED2FB95FB05C0FB9">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="4E4DCFD08BDFFF852FBC6D0627AE2FD7">Pei, Shengxiang</mods:namePart>
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</mods:name>
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<mods:name id="542E1AE7ADAA3459D0848C690BFB8B2E" type="personal">
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<mods:roleTerm id="D31C54AD6A1B5A4794B3757F5D19E9E8">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="DF160AACD3DFD2833CD428A2DA6F4CED">Jiang, Li</mods:namePart>
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<mods:typeOfResource id="3F1B1C21378AFF8D50258B8F2DAD463C">text</mods:typeOfResource>
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<mods:title id="2EB118E046746041DAFEFEEEDF121EFB">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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</mods:titleInfo>
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<mods:part id="EA6869282B0CA821B2033D65F487CD51">
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<mods:date id="7E1CF041A11D1EAD6DF4445E96271151">2020</mods:date>
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<mods:detail id="2B7C603DE34FA2120C5D04BB0C601B6B" type="pubDate">
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<mods:number id="041A3CD5E518D60B15869CAA5AA01F6A">2019-11-12</mods:number>
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<mods:detail id="EF509C821B621D9ED37FBA6E40E0C35E" type="volume">
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<mods:number id="478664D334942F45B941B7B7DAAF25E0">70</mods:number>
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<mods:start id="097B7B0848838BACE3D3803ED4D5D841">923</mods:start>
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<mods:identifier id="3B1CE598B4265A816F96BEA40846DD52" type="DOI">10.1099/ijsem.0.003847</mods:identifier>
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<mods:identifier id="F342FF725DA7647772C1185042DCD3CE" type="GBIF-Dataset">8378fda1-7808-476f-9c03-b551204b03e6</mods:identifier>
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<mods:identifier id="11F9F822DC096AA8ACDAC41542341925" type="ISSN">1466-5034</mods:identifier>
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<mods:identifier id="94D70B8644B12A1A0EE23661F1FA2D8B" type="Zenodo-Dep">3745040</mods:identifier>
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<treatment id="03ED97173551FFC1FCD2FA4660812576" ID-DOI="http://doi.org/10.5281/zenodo.3809589" ID-GBIF-Taxon="163540111" ID-Zenodo-Dep="3809589" LSID="urn:lsid:plazi:treatment:03ED97173551FFC1FCD2FA4660812576" httpUri="http://treatment.plazi.org/id/03ED97173551FFC1FCD2FA4660812576" lastPageId="4" lastPageNumber="927" pageId="3" pageNumber="926">
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<subSubSection id="C35E758A3551FFC6FCD2FA46655223C6" pageId="3" pageNumber="926" type="nomenclature">
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<paragraph id="8BFB26013551FFC6FCD2FA46655223C6" blockId="3.[828,1315,1467,1533]" pageId="3" pageNumber="926">
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<heading id="D0B3916D3551FFC6FCD2FA46655223C6" allCaps="true" bold="true" fontSize="12" level="2" pageId="3" pageNumber="926" reason="2">
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<emphasis id="B930FA133551FFC6FCD2FA46655223C6" bold="true" pageId="3" pageNumber="926">
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DESCRIPTION OF
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<taxonomicName id="4C445D823551FFC6FBDBFA4662D623C6" class="Actinobacteridae" family="Micrococcaceae" genus="Nesterenkonia" higherTaxonomySource="CoL" kingdom="Bacteria" order="Actinomycetales" pageId="3" pageNumber="926" phylum="Actinobacteria" rank="species" species="sphaerica" status="sp. nov.">
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<emphasis id="B930FA133551FFC6FBDBFA4662D623C6" bold="true" italics="true" pageId="3" pageNumber="926">NESTERENKONIA SPHAERICA</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A20347683551FFC6FC09FA1D655223C6" box="[999,1115,1504,1533]" pageId="3" pageNumber="926">SP. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C35E758A3551FFC6FCD2F9F064892078" pageId="3" pageNumber="926" type="etymology">
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<paragraph id="8BFB26013551FFC6FCD2F9F064892078" blockId="3.[828,1466,1548,1604]" pageId="3" pageNumber="926">
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<taxonomicName id="4C445D823551FFC6FCD2F9F06536201E" box="[828,1087,1549,1573]" class="Actinobacteridae" family="Micrococcaceae" genus="Nesterenkonia" higherTaxonomySource="CoL" kingdom="Bacteria" order="Actinomycetales" pageId="3" pageNumber="926" phylum="Actinobacteria" rank="species" species="sphaerica">
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<emphasis id="B930FA133551FFC6FCD2F9F06536201E" box="[828,1087,1549,1573]" italics="true" pageId="3" pageNumber="926">Nesterenkonia sphaerica</emphasis>
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</taxonomicName>
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(sphae'ri.ca. L. fem. adj.
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<taxonomicName id="4C445D823551FFC6FAB8F9F064B3201E" box="[1366,1466,1549,1573]" class="Actinobacteridae" family="Micrococcaceae" genus="Nesterenkonia" higherTaxonomySource="CoL" kingdom="Bacteria" order="Actinomycetales" pageId="3" pageNumber="926" phylum="Actinobacteria" rank="species" species="sphaerica">
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<emphasis id="B930FA133551FFC6FAB8F9F064B3201E" box="[1366,1466,1549,1573]" italics="true" pageId="3" pageNumber="926">sphaerica</emphasis>
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</taxonomicName>
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spherical, referring to the cell shape of the
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<typeStatus id="54FF98A33551FFC6FB11F9D16424207F" box="[1279,1325,1580,1604]" pageId="3" pageNumber="926">type</typeStatus>
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strain).
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</paragraph>
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</subSubSection>
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<subSubSection id="C35E758A3551FFC1FCD2F9A4604324DA" lastPageId="4" lastPageNumber="927" pageId="3" pageNumber="926" type="description">
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<paragraph id="8BFB26013551FFC1FCD2F9A4604324DA" blockId="3.[828,1467,1625,1958]" lastBlockId="4.[121,760,185,737]" lastPageId="4" lastPageNumber="927" pageId="3" pageNumber="926">
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Cells are Gram-stain-positive, aerobic, non-motile and non-spore-forming cocci (diameter
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<quantity id="4CBC8BE43551FFC6FB36F985645820AB" box="[1240,1361,1656,1680]" metricMagnitude="-4" metricUnit="m" metricValue="7.5" metricValueMax="8.0" metricValueMin="7.0" pageId="3" pageNumber="926" unit="mm" value="0.75" valueMax="0.8" valueMin="0.7">0.7–0.8 µm</quantity>
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) without any flagella. Colonies on MA are approximately
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<quantity id="4CBC8BE43551FFC6FAB3F96A64922094" box="[1373,1435,1687,1711]" metricMagnitude="-3" metricUnit="m" metricValue="1.0" pageId="3" pageNumber="926" unit="mm" value="1.0">1 mm</quantity>
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in diameter, opaque, smooth, circular with regular margins, convex and light-yellow in colour after 6 days at 30 °C. Growth occurs in 0–9% (w/v) NaCl (optimum, 1–4%), at pH 7–12 (pH 9–10) and at 10–40 °C (30–35 °C). Positive for catalase and oxidase. Negative for nitrate reduction, methyl red test, production of H
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<subScript id="17C024443551FFC6FB5EF8A265B12156" attach="both" box="[1200,1208,1887,1901]" fontSize="6" pageId="3" pageNumber="926">2</subScript>
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S and melanin, Voges– Proskauer reaction, and hydrolysis of starch, cellulose and casein. Assays using the API ZYM system are positive for alkaline phosphatase, esterase (C4), esterase lipase (C8), leucine arylamidase and naphthol-AS-BI-phosphohydrolase; weakly positive for valine arylamidase and acid phosphatase; negative for
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<emphasis id="B930FA133556FFC1FE88FEEA60702715" box="[358,377,279,302]" italics="true" pageId="4" pageNumber="927">N</emphasis>
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-acetyl-
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<emphasis id="B930FA133556FFC1FE23FEEB60D22715" box="[461,475,278,302]" italics="true" pageId="4" pageNumber="927">β</emphasis>
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-glucosaminidase, cystine arylamidase,
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<emphasis id="B930FA133556FFC1FEE5FECB60102776" box="[267,281,310,333]" italics="true" pageId="4" pageNumber="927">α</emphasis>
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-chymotrypsin,
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<emphasis id="B930FA133556FFC1FE27FECB60DE2776" box="[457,471,310,333]" italics="true" pageId="4" pageNumber="927">α</emphasis>
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-glucosidase, lipase (C14), trypsin,
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<emphasis id="B930FA133556FFC1FF38FEA861ED2757" box="[214,228,341,364]" italics="true" pageId="4" pageNumber="927">α</emphasis>
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-galactosidase,
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<emphasis id="B930FA133556FFC1FE65FEA860902756" box="[395,409,341,365]" italics="true" pageId="4" pageNumber="927">β</emphasis>
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-glucuronidase,
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<emphasis id="B930FA133556FFC1FDA5FEA863502756" box="[587,601,341,365]" italics="true" pageId="4" pageNumber="927">β</emphasis>
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-galactosidase,
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<emphasis id="B930FA133556FFC1FF97FE89618E27B7" box="[121,135,372,396]" italics="true" pageId="4" pageNumber="927">β</emphasis>
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-glucosidase,
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<emphasis id="B930FA133556FFC1FEF0FE89602427B0" box="[286,301,372,395]" italics="true" pageId="4" pageNumber="927">α</emphasis>
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-mannosidase and
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<emphasis id="B930FA133556FFC1FDEFFE89630627B7" box="[513,527,372,396]" italics="true" pageId="4" pageNumber="927">β</emphasis>
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-fucosidase. Analysis using the API 20NE system reveals that cells are positive for hydrolysis of aesculin and gelatin; negative for the remaining 18 substrates. The major menaquinones are MK-7, MK-8 and MK-9. The peptidoglycan
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<typeStatus id="54FF98A33556FFC1FE67FE0D60BE2433" box="[393,439,496,520]" pageId="4" pageNumber="927">type</typeStatus>
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is A4
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<emphasis id="B930FA133556FFC1FE01FE0D60F4243C" box="[495,509,496,519]" italics="true" pageId="4" pageNumber="927">α</emphasis>
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, L-Lys–L-Glu. The polar lipids detected are diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, one unidentified glycolipid, two unidentified phospholipids and three unidentified lipids. The major fatty acids are anteiso-C
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<subScript id="17C024443556FFC1FE14FD86631E24B2" attach="left" box="[506,535,635,649]" fontSize="6" pageId="4" pageNumber="927">15:0</subScript>
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and anteiso-C
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<subScript id="17C024443556FFC1FD56FD8663DD24B2" attach="right" box="[696,724,635,649]" fontSize="6" pageId="4" pageNumber="927">17:0</subScript>
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; in addition, significant amounts of iso-C
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<subScript id="17C024443556FFC1FDFAFD6763392493" attach="left" box="[532,560,666,680]" fontSize="6" pageId="4" pageNumber="927">16:0</subScript>
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, iso-C
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<subScript id="17C024443556FFC1FD96FD67639D2493" attach="left" box="[632,660,666,680]" fontSize="6" pageId="4" pageNumber="927">15:0</subScript>
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and C
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<subScript id="17C024443556FFC1FD32FD6763F12493" attach="left" box="[732,760,666,680]" fontSize="6" pageId="4" pageNumber="927">16:0</subScript>
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are also present. The genomic DNA G+C content of the
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<typeStatus id="54FF98A33556FFC1FD27FD5763FE24F9" box="[713,759,682,706]" pageId="4" pageNumber="927">type</typeStatus>
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strain is 64.3 mol%.
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</paragraph>
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</subSubSection>
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<subSubSection id="C35E758A3556FFC1FF97FD0A60812576" pageId="4" pageNumber="927" type="materials_examined">
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<paragraph id="8BFB26013556FFC1FF97FD0A60812576" blockId="4.[121,759,757,845]" pageId="4" pageNumber="927">
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<materialsCitation id="3B2C2C5C3556FFC1FF97FD0A608D2576" ID-GBIF-Occurrence="2597464800" collectionCode="GY" location="Southern Atlantic Ocean" pageId="4" pageNumber="927" specimenCode="GY239T" specimenCount="1" typeStatus="type">
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The
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<typeStatus id="54FF98A33556FFC1FF4BFD0A61DA2534" box="[165,211,759,783]" pageId="4" pageNumber="927">type</typeStatus>
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strain,
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<specimenCode id="DBE28E7A3556FFC1FEF1FD0A60782538" box="[287,369,757,783]" pageId="4" pageNumber="927">
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GY239
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<superScript id="7C318B493556FFC1FE86FD0860782538" attach="left" box="[360,369,757,771]" fontSize="6" pageId="4" pageNumber="927">T</superScript>
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</specimenCode>
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=(KCTC 39640
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<superScript id="7C318B493556FFC1FDF9FD0863292538" attach="none" box="[535,544,757,771]" fontSize="6" pageId="4" pageNumber="927">T</superScript>
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=MCCC 1A10688
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<superScript id="7C318B493556FFC1FD31FD0863E12538" attach="none" box="[735,744,757,771]" fontSize="6" pageId="4" pageNumber="927">T</superScript>
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), was isolated from marine sediment collected from the
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<location id="8E9B70DA3556FFC1FF97FCC8608D2576" LSID="urn:lsid:plazi:treatment:03ED97173551FFC1FCD2FA4660812576:8E9B70DA3556FFC1FF97FCC8608D2576" box="[121,388,821,845]" name="Southern Atlantic Ocean" pageId="4" pageNumber="927">Southern Atlantic Ocean</location>
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</materialsCitation>
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.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |