169 lines
13 KiB
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169 lines
13 KiB
XML
<document ID-DOI="10.1111/bij.12553" ID-ISSN="0024-4082" IM.bibliography_approvedBy="tatiana" IM.illustrations_approvedBy="tatiana" IM.metadata_approvedBy="tatiana" IM.tables_approvedBy="tatiana" IM.taxonomicNames_approvedBy="tatiana" IM.treatments_approvedBy="tatiana" checkinTime="1681221366312" checkinUser="felipe" docAuthor="Dentinger, BTM, Gaya, E, O'Brien, H, Suz, LM, Lachlan, R, Diaz-Valderrama, JR, Koch, RA & Aime, MC" docDate="2016" docId="03A2EB6EFFCDFFC2FF303B90FD5D8237" docLanguage="en" docName="BiolJourLinnSoc.117.11-32.pdf" docOrigin="Biological Journal of the Linnean Society 117" docStyle="DocumentStyle:9003E61B240086A483DF5C949807DC7E.1:BiolJourLinnSoc.2003-.journal_article" docStyleId="9003E61B240086A483DF5C949807DC7E" docStyleName="BiolJourLinnSoc.2003-.journal_article" docStyleVersion="1" docTitle="Hygrophorineae Dentinger & Gaya & O'Brien & Suz & Lachlan & Diaz-Valderrama & Koch & Aime 2016, subord. nov." docType="treatment" docVersion="1" lastPageNumber="26" masterDocId="FF9B9316FFC2FFCDFF963F07FFAA855B" masterDocTitle="Tales from the crypt: genome mining from fungarium specimens improves resolution of the mushroom tree of life" masterLastPageNumber="32" masterPageNumber="11" pageNumber="26" updateTime="1681984371198" updateUser="tatiana">
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<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo>
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<mods:title>Tales from the crypt: genome mining from fungarium specimens improves resolution of the mushroom tree of life</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Dentinger, BTM</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Gaya, E</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>O'Brien, H</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Suz, LM</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Lachlan, R</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Diaz-Valderrama, JR</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Koch, RA</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Aime, MC</mods:namePart>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:relatedItem type="host">
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<mods:titleInfo>
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<mods:title>Biological Journal of the Linnean Society</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2016</mods:date>
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<mods:detail type="pubDate">
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<mods:number>2015-03-26</mods:number>
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</mods:detail>
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<mods:detail type="volume">
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<mods:number>117</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>11</mods:start>
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<mods:end>32</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">10.1111/bij.12553</mods:identifier>
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<mods:identifier type="ISSN">0024-4082</mods:identifier>
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</mods:mods>
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<treatment LSID="urn:lsid:plazi:treatment:03A2EB6EFFCDFFC2FF303B90FD5D8237" httpUri="http://treatment.plazi.org/id/03A2EB6EFFCDFFC2FF303B90FD5D8237" lastPageNumber="26" pageId="15" pageNumber="26">
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<subSubSection pageId="15" pageNumber="26" type="nomenclature">
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<paragraph blockId="15.[166,781,1175,1900]" pageId="15" pageNumber="26">
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<taxonomicName authority="Dentinger & Gaya & O'Brien & Suz & Lachlan & Diaz-Valderrama & Koch & Aime, 2016" authorityName="Dentinger & Gaya & O'Brien & Suz & Lachlan & Diaz-Valderrama & Koch & Aime" authorityYear="2016" box="[166,376,1175,1197]" kingdom="Fungi" pageId="15" pageNumber="22" rank="subOrder" status="subord. nov." subOrder="Hygrophorineae">
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<emphasis bold="true" box="[166,376,1175,1197]" pageId="15" pageNumber="26">Hygrophorineae</emphasis>
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</taxonomicName>
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Aime, Dentinger & Gaya
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<emphasis italics="true" pageId="15" pageNumber="26">
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<taxonomicNameLabel pageId="15" pageNumber="26" rank="subOrder">subord. nov.</taxonomicNameLabel>
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</emphasis>
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</paragraph>
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</subSubSection>
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<subSubSection box="[191,521,1236,1258]" pageId="15" pageNumber="26" type="description">
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<paragraph blockId="15.[166,781,1175,1900]" box="[191,521,1236,1258]" pageId="15" pageNumber="26">
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<emphasis box="[191,398,1237,1258]" italics="true" pageId="15" pageNumber="26">Name registration</emphasis>
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: IF551135
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</paragraph>
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</subSubSection>
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<subSubSection pageId="15" pageNumber="26" type="type_taxon">
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<paragraph blockId="15.[166,781,1175,1900]" pageId="15" pageNumber="26">
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<emphasis box="[191,336,1267,1289]" italics="true" pageId="15" pageNumber="26">
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<typeStatus box="[191,245,1268,1289]" pageId="15" pageNumber="26">Type</typeStatus>
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family
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</emphasis>
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:
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<taxonomicName authority="Lotsy, Vortr." authorityName="Lotsy, Vortr." box="[361,721,1267,1289]" class="Agaricomycetes" family="Hygrophoraceae" kingdom="Fungi" order="Agaricales" pageId="15" pageNumber="26" phylum="Basidiomycota" rank="family">Hygrophoraceae Lotsy, Vortr.</taxonomicName>
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bot. Stammesgesch: 706 (1907).
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</paragraph>
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</subSubSection>
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<subSubSection pageId="15" pageNumber="26" type="discussion">
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<paragraph blockId="15.[166,781,1175,1900]" pageId="15" pageNumber="26">Basidiomata primarily clavarioid or agaricoid, often pigmented with carotenoids and waxy. Hyphae monomitic, usually with clamp connections, nonamyloid. Cystidia normally absent; basidia normally 2–4 spored; basidiospores hyaline.</paragraph>
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<paragraph blockId="15.[166,781,1175,1900]" pageId="15" pageNumber="26">
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<emphasis box="[191,457,1481,1503]" italics="true" pageId="15" pageNumber="26">Representative families</emphasis>
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:
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<taxonomicName authority="Chevall." authorityName="Chevall." box="[472,726,1481,1503]" class="Agaricomycetes" family="Clavariaceae" kingdom="Fungi" order="Agaricales" pageId="15" pageNumber="26" phylum="Basidiomycota" rank="family">Clavariaceae Chevall.</taxonomicName>
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,
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<taxonomicName class="Agaricomycetes" family="Hygrophoraceae" kingdom="Fungi" order="Agaricales" pageId="15" pageNumber="26" phylum="Basidiomycota" rank="family">Hygrophoraceae</taxonomicName>
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.
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</paragraph>
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<paragraph blockId="15.[166,781,1175,1900]" pageId="15" pageNumber="26">
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<emphasis box="[191,254,1543,1564]" italics="true" pageId="15" pageNumber="26">Notes</emphasis>
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: This suborder is equivalent to
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<taxonomicName class="Agaricomycetes" family="Hygrophoraceae" kingdom="Fungi" order="Agaricales" pageId="15" pageNumber="26" phylum="Basidiomycota" rank="family">Hygrophoraceae</taxonomicName>
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and
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<taxonomicName authority="sensu Matheny et al. (2006)" authorityName="Matheny" authorityYear="2006" box="[285,781,1573,1595]" class="Agaricomycetes" family="Clavariaceae" kingdom="Fungi" order="Agaricales" pageId="15" pageNumber="26" phylum="Basidiomycota" rank="family">
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Clavariaceae
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<emphasis box="[446,509,1573,1594]" italics="true" pageId="15" pageNumber="26">sensu</emphasis>
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<bibRefCitation author="Matheny PB & Curtis JM & Hofstetter V & Aime MC & Moncalvo JM & Ge ZW & Slot JC & Ammirati JF & Baroni TJ & Bougher NL & Hughes KW & Lodge DJ & Kerrigan RW & Seidl MT & Aanen DK & DeNitis M & Daniele GM & Desjardin DE & Kropp BR & Norvell LL & Parker A & Vellinga EC & Vilgalys R & Hibbett DS" box="[523,781,1573,1595]" pageId="15" pageNumber="26" pagination="982 - 995" refId="ref15027" refString="Matheny PB, Curtis JM, Hofstetter V, Aime MC, Moncalvo JM, Ge ZW, Slot JC, Ammirati JF, Baroni TJ, Bougher NL, Hughes KW, Lodge DJ, Kerrigan RW, Seidl MT, Aanen DK, DeNitis M, Daniele GM, Desjardin DE, Kropp BR, Norvell LL, Parker A, Vellinga EC, Vilgalys R, Hibbett DS. 2006. Major clades of Agaricales: a multilocus phylogenetic overview. Mycologia 98: 982 - 995." type="journal article" year="2006">
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Matheny
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<emphasis box="[639,697,1573,1594]" italics="true" pageId="15" pageNumber="26">et al.</emphasis>
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(2006)
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</bibRefCitation>
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</taxonomicName>
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and Hygrophoroid clade plus
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<taxonomicName box="[520,667,1603,1625]" class="Agaricomycetes" family="Clavariaceae" kingdom="Fungi" order="Agaricales" pageId="15" pageNumber="26" phylum="Basidiomycota" rank="family">Clavariaceae</taxonomicName>
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<emphasis box="[679,720,1603,1624]" italics="true" pageId="15" pageNumber="26">fide</emphasis>
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Bin- der
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<emphasis box="[221,279,1634,1655]" italics="true" pageId="15" pageNumber="26">et al.</emphasis>
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(2010).
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<bibRefCitation author="Ryberg M & Matheny PB" box="[392,719,1634,1656]" pageId="15" pageNumber="26" pagination="1862 - 1878" refId="ref16055" refString="Ryberg M, Matheny PB. 2011. Incomplete taxon sampling and diversification in a large clade of mushroom-forming fungi. Evolution 65: 1862 - 1878." type="journal article" year="2011">Ryberg & Matheny (2011)</bibRefCitation>
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also recovered a statistically support monophyletic group of
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<taxonomicName box="[197,382,1695,1717]" class="Agaricomycetes" family="Hygrophoraceae" kingdom="Fungi" order="Agaricales" pageId="15" pageNumber="26" phylum="Basidiomycota" rank="family">Hygrophoraceae</taxonomicName>
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and
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<taxonomicName box="[446,597,1695,1717]" class="Agaricomycetes" family="Clavariaceae" kingdom="Fungi" order="Agaricales" pageId="15" pageNumber="26" phylum="Basidiomycota" rank="family">Clavariaceae</taxonomicName>
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. There is growing evidence that the preponderance of species may be biotrophic and many members form associations with grasses, mosses, and bryophytes (
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<bibRefCitation author="Seitzman BH & Ouimette A & Mixon RL & Hobbie EA & Hibbett DS" pageId="15" pageNumber="26" pagination="280 - 290" refId="ref16298" refString="Seitzman BH, Ouimette A, Mixon RL, Hobbie EA, Hibbett DS. 2011. Conservation of biotrophy in Hygro- phoraceae inferred from combined stable isotope and phylogenetic analyses. Mycologia 103: 280 - 290." type="journal article" year="2011">
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Seitzman
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<emphasis box="[166,224,1817,1839]" italics="true" pageId="15" pageNumber="26">et al.</emphasis>
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, 2011
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</bibRefCitation>
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;
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<bibRefCitation author="Birkebak JM & Mayor JR & Ryberg KM & Matheny PB" box="[315,564,1817,1839]" pageId="15" pageNumber="26" pagination="896 - 911" refId="ref12577" refString="Birkebak JM, Mayor JR, Ryberg KM, Matheny PB. 2013. A systematic, morphological and ecological overview of the Clavariaceae (Agaricales). Mycologia 105: 896 - 911." type="journal article" year="2013">
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Birkebak
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<emphasis box="[431,489,1817,1839]" italics="true" pageId="15" pageNumber="26">et al.</emphasis>
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, 2013
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</bibRefCitation>
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;
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<bibRefCitation author="Halbwachs H & Dentinger BTM & Detheridge AP & Karasch P & Griffith GW" pageId="15" pageNumber="26" pagination="487 - 492" refId="ref13735" refString="Halbwachs H, Dentinger BTM, Detheridge AP, Karasch P, Griffith GW. 2013. Hyphae of waxcap fungi colonise plant roots. Fungal Ecology 6: 487 - 492." type="journal article" year="2013">
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Halbwachs
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<emphasis box="[716,774,1817,1839]" italics="true" pageId="15" pageNumber="26">et al.</emphasis>
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, 2013
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</bibRefCitation>
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;
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<bibRefCitation author="Lodge DJ & Padamsee M & Matheny PB & Aime MC & Cantrell SA & Boertmann D & Kovalenko A & Vizzini A & Dentinger BTM & Kirk PM & Ainsworth AM & Moncalvo J-M & Vilgalys R & Larsson E & Griffith GW & Smith ME & Norvell LL & Desjardin DE & Redhead SA & Ovrebo CL & Lickey EB & Ercole E & Hughes KW & Courtecuisse R & Young A & Binder M & Minnis AM & Lindner DL & Santana B & Haight J & Laessoe T & Baroni TJ & Geml J & Hattori T" box="[238,449,1848,1870]" pageId="15" pageNumber="26" pagination="1 - 99" refId="ref14532" refString="Lodge DJ, Padamsee M, Matheny PB, Aime MC, Cantrell SA, Boertmann D, Kovalenko A, Vizzini A, Dentinger BTM, Kirk PM, Ainsworth AM, Moncalvo J-M, Vilgalys R, Larsson E, L ucking € R, Griffith GW, Smith ME, Norvell LL, Desjardin DE, Redhead SA, Ovrebo CL, Lickey EB, Ercole E, Hughes KW, Courtecuisse R, Young A, Binder M, Minnis AM, Lindner DL, Ortiz- Santana B, Haight J, Laessoe T, Baroni TJ, Geml J, Hattori T. 2014. Molecular phylogeny, morphology, pigment chemistry and ecology in Hygrophoraceae (Agaricales). Fungal Diversity 64: 1 - 99." type="journal article" year="2014">
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Lodge
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<emphasis box="[316,375,1848,1869]" italics="true" pageId="15" pageNumber="26">et al.</emphasis>
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, 2014
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</bibRefCitation>
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). Development of carotenoid pigments is also especially diverse in this suborder.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |