189 lines
14 KiB
XML
189 lines
14 KiB
XML
<document id="BFEC04E5E6124C2DD6BE14CFB1B12BA2" ID-DOI="10.3897/mycokeys.107.125549" ID-publisher-id="125549" URI-arpha="3EA0E723-E6FC-58B0-8491-ED4CC2FBAB87" XM.bibliography_approvedBy="admin" XM.materialsCitations_approvedBy="admin" XM.taxonomicNames_approvedBy="admin" XM.treatmentCitations_approvedBy="admin" XM.treatments_approvedBy="admin" article-type="research-article" checkinTime="1723223129036" checkinUser="pensoft" docAuthor="Tedersoo, Leho, Magurno, Franco, Alkahtani, Saad & Mikryukov, Vladimir" docDate="2024" docId="3EF89F07323756C3AB4B37AEDC4F9360" docLanguage="en" docName="MycoKeys 107: 249-271" docOrigin="MycoKeys 107" docSource="https://mycokeys.pensoft.net/article/125549/download/xml/" docStyle="DocumentStyle:PensoftTaxPub.0000.journal_article.mycokeys" docStyleName="PensoftTaxPub.0000.journal_article.mycokeys" docTitle="Pseudoentrophospora kesseensis Tedersoo & Magurno 2024, sp. nov." docType="treatment" docVersion="3" dtd-version="3.0" lastPageNumber="271" masterDocId="3EA0E723E6FC58B08491ED4CC2FBAB87" masterDocTitle="Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)" masterLastPageNumber="271" masterPageNumber="249" pageNumber="249" updateTime="1723229704978" updateUser="ExternalLinkService">
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<mods:mods id="6BE9F2EAA21F16AE0EC4BFB50B6E22D5" xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo id="7493291D8CB9522CAA9549D742482964">
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<mods:title id="D98E0E74C12E371DC188C21CCEFD3F9D">Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)</mods:title>
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</mods:titleInfo>
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<mods:name id="AECFB1E4995744F61E3EC7670B7F30CE" type="personal">
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<mods:role id="F0211158DE4F941E936EAF7DB0FA40C7">
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<mods:roleTerm id="4017C7792178930B3C3994E0B2211C21">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="6DD06197B9952D3A9EE7101482521200">Tedersoo, Leho</mods:namePart>
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<mods:affiliation id="EE29B74DB344CCD8CE5BBCF4A155F449">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia & Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="AE2A7DAFFF2F224333AB5118B2CAD9A7" type="personal">
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<mods:role id="C5D8F8104BA01EC69E99F4747F8262C8">
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<mods:roleTerm id="9BB918B642671A3298EDC1A7FE5D12A6">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="FAAD9C0F5740AD2EBDE2CFA6E969BFD0">Magurno, Franco</mods:namePart>
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<mods:nameIdentifier id="74EEA933EE0F64700424EABD735422FF" type="ORCID">0000-0002-3117-8149</mods:nameIdentifier>
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<mods:affiliation id="305A4ACD63B8132F7E172F1468780D77">Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Jagiellońska 28, 40 - 032 Katowice, Poland</mods:affiliation>
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</mods:name>
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<mods:name id="E15CA3B96F63357D11660B28660BDFF1" type="personal">
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<mods:roleTerm id="144FDA5220629FFB4A58C085276FB0C9">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="2369E532B7995997D6A313D5B74AFBC7">Alkahtani, Saad</mods:namePart>
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<mods:nameIdentifier id="F9B1B99BB6982B2588B12640932D4154" type="ORCID">0000-0001-7381-5110</mods:nameIdentifier>
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<mods:affiliation id="BBB7EA303B1AF4222FFAA85D02CED308">Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="AA435CB93B60279C4153F397CA99F4F1" type="personal">
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<mods:roleTerm id="A42FB0FED29523A804F661A4B1418B52">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="EFE9D4BCF01CF9554D300FB6FE54C00E">Mikryukov, Vladimir</mods:namePart>
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<mods:nameIdentifier id="84E72264D4B81FD0C36AE2630042A7D4" type="ORCID">0000-0003-2786-2690</mods:nameIdentifier>
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<mods:affiliation id="4BCD45E6EB353606412CD8A2AEF74A8A">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia</mods:affiliation>
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</mods:name>
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<mods:typeOfResource id="416289BD019064DC9E65F1C6053D2C85">text</mods:typeOfResource>
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<mods:titleInfo id="19A055B1D0351C3B58F389CA621799C7">
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<mods:title id="793EFB148874D7ECE38695BFFA56C058">MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part id="C48C277D21940BCCB06C02876257E39D">
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<mods:date id="08F9590DD7DF89653D44FA4983D83EE5">2024</mods:date>
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<mods:detail id="91305C72DA68160B2C036756BB4B6D95" type="pubDate">
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<mods:number id="55246B4EEB5CABD47C9B830598AF2CFC">2024-08-09</mods:number>
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</mods:detail>
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<mods:detail id="7A393D3F29A45FA02FF189E8CBD31E60" type="volume">
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<mods:number id="E3383C12DDE48C05735CFD144ED6053D">107</mods:number>
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</mods:detail>
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<mods:extent id="68D4CBFB80543B5861235C6DB0E4BC02" unit="page">
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<mods:start id="D4EC20DCB0152D17B7B4121CDA7A5FC5">249</mods:start>
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<mods:end id="23DB69F47FEE3D7AA68F5BBCC3C701B1">271</mods:end>
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</mods:extent>
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</mods:part>
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<mods:classification id="E06C35844F9B67E6F52359CD5CE5833B">journal article</mods:classification>
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<mods:identifier id="A85ACE3D64191788550D127E56FF204F" type="DOI">10.3897/mycokeys.107.125549</mods:identifier>
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</mods:mods>
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<treatment id="3EF89F07323756C3AB4B37AEDC4F9360" ID-DOI="http://doi.org/10.5281/zenodo.13287032" ID-Zenodo-Dep="13287032" ID-arpha="3EF89F07-3237-56C3-AB4B-37AEDC4F9360" ID-mycobank="853566" LSID="urn:lsid:plazi:treatment:3EF89F07323756C3AB4B37AEDC4F9360" httpUri="http://treatment.plazi.org/id/3EF89F07323756C3AB4B37AEDC4F9360">
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<subSubSection id="A2E94FDCE4BA8DA6AA1F02B1A2C74282" type="nomenclature">
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<paragraph id="C4F20925ACB97F5DC726B1B8D8B74035">
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<taxonomicName id="951AD4F3C5C3A19DB4A9B977914E6366" authority="Tedersoo & Magurno" authorityName="Tedersoo & Magurno" authorityYear="2024" class="Glomeromycetes" genus="Pseudoentrophospora" kingdom="Fungi" order="Entrophosporales" phylum="Glomeromycota" rank="species" species="kesseensis" status="sp. nov.">
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<emphasis id="5E044621E735F800D3BB014504D6CFDB" italics="true">Pseudoentrophospora kesseensis</emphasis>
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Tedersoo & Magurno
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</taxonomicName>
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<taxonomicNameLabel id="486ED3FE5217E0FC2F14B622EDCAA145" rank="species">sp. nov.</taxonomicNameLabel>
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EEUBG" type="diagnosis">
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<paragraph id="0D0339C60F4D9D0411878981423DB44B">
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<heading id="E513C235087F44492F4767BA662C2CB1" reason="title">Diagnosis.</heading>
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</paragraph>
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<paragraph id="E48707A46EC840D0574561ECF8845F37">
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Differs from other species of
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<taxonomicName id="F483D1D32678A60628D001393402457A" class="Glomeromycetes" family="Glomeraceae" genus="Pseudoentrophospora" kingdom="Fungi" order="Glomerales" phylum="Glomeromycota" rank="genus">
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<emphasis id="7B7912EBD25D2B2B69EA6B6A39AA88FA" italics="true">Pseudoentrophospora</emphasis>
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</taxonomicName>
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and
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<taxonomicName id="F8F8866D6936590F974C36B23293188C" class="Glomeromycetes" family="Acaulosporaceae" genus="Entrophospora" kingdom="Fungi" order="Diversisporales" phylum="Glomeromycota" rank="genus">
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<emphasis id="9EDCB10B3365485AD2EDBCB46460E41B" italics="true">Entrophospora</emphasis>
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</taxonomicName>
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based on the
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<abbrev id="ABBRID0EYUBG" xlink_title="internal transcribed spacer">ITS</abbrev>
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region (ITS 2 positions 127–146 gaaccgcaaattacgcatta, one mismatch allowed) and LSU (positions 486–515 gaacaggtcaacatcaattcttattgccat, one mismatch allowed) as indicated in Fig.
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<figureCitation id="CAD0FC9F9CC82A904A99BE7C857436C1" captionStart="Figure 3" captionStartId="F3" captionText="Figure 3. Diagnostic barcodes for Pseudoentrophospora kesseensis relative to closely-related taxa in ITS 2 and LSU." figureDoi="10.3897/mycokeys.107.125549.figure3" httpUri="https://binary.pensoft.net/fig/1111390">3</figureCitation>
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.
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</paragraph>
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<caption id="0ECCE3D39B9551034604E7ABF7C929D9" ID-DOI="10.3897/mycokeys.107.125549.figure3" ID-arpha="551B41D5-BC3C-501A-BA3E-ADD0A7C86B2C" httpUri="https://binary.pensoft.net/fig/1111390" startId="F3">
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<paragraph id="76C9131DD998CD301F2B9D2344A14EBD">
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<label id="097BE03298A85592C2A6590B332F9790">Figure 3.</label>
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</paragraph>
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<paragraph id="E357273B8800CC6ECB9AD32299F3CD5A">
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Diagnostic barcodes for
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<taxonomicName id="4C8DE54A36E43A1DFBAEDCEC7BE7757A" class="Glomeromycetes" family="Glomeraceae" genus="Pseudoentrophospora" kingdom="Fungi" order="Glomerales" phylum="Glomeromycota" rank="species" species="kesseensis">
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<emphasis id="97363083AF7A1097852E7222B250D534" italics="true">Pseudoentrophospora kesseensis</emphasis>
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</taxonomicName>
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relative to closely-related taxa in ITS 2 and LSU.
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</paragraph>
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</caption>
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</subSubSection>
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<subSubSection id="SECID0EYVBG" type="material">
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<paragraph id="CF5F0959EC435E49F35A1588B07AB887">
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<heading id="6A7427E6D90D9E48ECB23312B8C390E1" reason="title">Type.</heading>
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</paragraph>
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<paragraph id="120C1BBD6FAB14C654E696972EAF0373">
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<materialsCitation id="FCFE52FBA737FAE1268E5C2D5C61CA9C" collectedFrom="coppiced Juniperus - Acer woodland" collectionCode="TUE, EUK" country="Estonia" latitude="58.63443" location="Kesse Island" longLatPrecision="1" longitude="23.43938" specimenCode="TUE 101916, EUK 1631429, TUE 001916" specimenCount="2" typeStatus="holotype">
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Soil
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<abbrev id="ABBRID0E5VBG" xlink_title="environmental DNA">eDNA</abbrev>
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sample
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<specimenCode id="5A7714754C2940C6FCF42DD8D1DDEBE7">TUE 101916</specimenCode>
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(
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<emphasis id="C8499679C2F104A420970A293A68A3CE" bold="true" italics="true">
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<typeStatus id="0C9A3D1556BC893C02E87DA10A258B53" type="holotype">holotype</typeStatus>
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</emphasis>
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);
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<abbrev id="ABBRID0EFWBG" xlink_title="environmental DNA">eDNA</abbrev>
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sequence
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<specimenCode id="EF8B0F0C3D87633F7B12D24A3EA4F1FD">EUK 1631429</specimenCode>
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(
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<emphasis id="C032709F6751E2688BD92746B5C42B3C" bold="true" italics="true">
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<typeStatus id="AD3E40CE3A1F6E4DEFC54C2A6B88EBAF" type="lectotype">lectotype</typeStatus>
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</emphasis>
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);
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<abbrev id="ABBRID0EMWBG" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot G 4940,
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<collectedFrom id="E3D0F67B2F7DB6971E2600E5AA51C6BC">
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coppiced
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<taxonomicName id="2EC77ECCACB0ED6DC9E293CA1BA62EBD" class="Pinopsida" family="Cupressaceae" genus="Juniperus" kingdom="Plantae" order="Pinales" phylum="Tracheophyta" rank="genus">
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<emphasis id="EE69FB39EC578851BD7C3A2BE6D3B083" italics="true">Juniperus</emphasis>
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</taxonomicName>
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-
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<taxonomicName id="73740DED65A484170C8DB828E46A12AB" class="Magnoliopsida" family="Sapindaceae" genus="Acer" kingdom="Plantae" order="Sapindales" phylum="Tracheophyta" rank="genus">
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<emphasis id="A52E5D10BF8D9D581E8DF097E45AFEF1" italics="true">Acer</emphasis>
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</taxonomicName>
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woodland
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</collectedFrom>
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(soil sample
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<specimenCode id="CE8D74ABF3EC669E5D29C8CD4D2E196A">TUE 001916</specimenCode>
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) in
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<location id="BB969467F394916E06AE4CF05B2E2DEB" LSID="urn:lsid:plazi:treatment:3EF89F07323756C3AB4B37AEDC4F9360:BB969467F394916E06AE4CF05B2E2DEB" country="Estonia" latitude="58.63443" longLatPrecision="1" longitude="23.43938" name="Kesse Island">Kesse Island</location>
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,
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<collectingCountry id="B47A6EF6FBCC4F18D291BE6F3CBA6520" name="Estonia">Estonia</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EBXBG" specific-use="{"type":"Point","coordinates":[23.439380,58.634430]}">
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<geoCoordinate id="73D337CFBDE0B30A5BF57D646812ED85" degrees="58.63443" direction="north" orientation="latitude" precision="1" value="58.63443">58.63443 ° N</geoCoordinate>
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,
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<geoCoordinate id="A91CBE978BA8025FCE8D2CB48A093076" degrees="23.43938" direction="east" orientation="longitude" precision="1" value="23.43938">23.43938 ° E</geoCoordinate>
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</named-content>
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</materialsCitation>
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.
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EGXBG" type="description">
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<paragraph id="5E40E9B0B219E04E8E49569C7CB87C99">
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<heading id="F76CFF2551370057D1A7BDB9FA77A150" reason="title">Description.</heading>
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</paragraph>
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<paragraph id="12F3C6D7D9686B9EDDC09EC0595BE3AC">
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Other
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<abbrev id="ABBRID0EMXBG" xlink_title="environmental DNA">eDNA</abbrev>
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sequences EUK 1636430 – EUK 1636432 from the type locality.
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EQXBG" type="etymology">
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<paragraph id="2C51D00E4A881D68133C6A78F5DB48FC">
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<heading id="21D85F49C4BE0CB6F03BCF146E1EA95D" reason="title">Etymology.</heading>
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</paragraph>
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<paragraph id="0E5D3E961BF2D88A7DD42A0347C6A93B">
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<emphasis id="B6EB69DB076DFFF212A1B77FCC2DDEEC" italics="true">pseudo</emphasis>
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(Greek) = false;
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<emphasis id="7AD576D0A2E018EC01DF3C8E21D4B4DA" italics="true">Entrophospora</emphasis>
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(Latin) refers to a related fungal genus; and
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<emphasis id="DFDCB871EE2510CA161233F9281476ED" italics="true">kesseensis</emphasis>
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(Latin) indicates locality of the type species. The name depicts phylogenetic relatedness to
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<emphasis id="186D08C1A6109DB50F97997C2BC170DB" italics="true">Entrophosphora</emphasis>
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and the only locality where the type species has been recorded.
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EQYBG" type="notes">
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<paragraph id="2AF24A3D9A9C4591BF4601FC7CB02564">
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<heading id="1E12A08C61E64B6CBDAB758370432B98" reason="title">Notes.</heading>
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</paragraph>
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<paragraph id="2EA4BB7985065A2B62DF465A8F58298F">
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Found from a single site, with
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<abbrev id="ABBRID0EWYBG" xlink_title="internal transcribed spacer">ITS</abbrev>
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and LSU sequences differing up to 0.5 % and 1 %, respectively. The ITS 1 subregion harbours only 58 bases, being amongst the shortest across fungi (excl. microsporidians).
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |