229 lines
31 KiB
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229 lines
31 KiB
XML
<document id="052AB78B3722B6CECBC446CBFFF34EF7" ID-DOI="10.11646/phytotaxa.365.1.1" ID-ISSN="1179-3163" ID-Zenodo-Dep="13704923" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="felipe" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="GgImagineBatch" IM.taxonomicNames_approvedBy="felipe" IM.treatments_approvedBy="felipe" checkinTime="1725584015738" checkinUser="felipe" docAuthor="Mai, Truc, Johansen, Jeffrey R., Pietrasiak, Nicole, Bohunická, Markéta & Martin, Michael P." docDate="2018" docId="03BFDE646C4FFFA7009AF8BAFCEEFBF7" docLanguage="en" docName="phytotaxa.365.1.1.pdf" docOrigin="Phytotaxa 365 (1)" docSource="http://dx.doi.org/10.11646/phytotaxa.365.1.1" docStyle="DocumentStyle:96748F8F1B6C902996E134952A3A36B9.13:Phytotaxa.2014-.journal_article" docStyleId="96748F8F1B6C902996E134952A3A36B9" docStyleName="Phytotaxa.2014-.journal_article" docStyleVersion="13" docTitle="Timaviella obliquedivisa Mai, Johansen et Bohunicka 2018, sp. nov." docType="treatment" docVersion="2" lastPageNumber="36" masterDocId="FF86A61C6C6EFF840012FFAAFF98FF96" masterDocTitle="Revision of the Synechococcales (Cyanobacteria) through recognition of four families including Oculatellaceae fam. nov. and Trichocoleaceae fam. nov. and six new genera containing 14 species" masterLastPageNumber="59" masterPageNumber="1" pageNumber="34" updateTime="1725596029488" updateUser="ExternalLinkService" zenodo-license-figures="UNSPECIFIED" zenodo-license-treatments="UNSPECIFIED">
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<mods:title id="86671CEA40BBFE832E9C748F805FDB85">Revision of the Synechococcales (Cyanobacteria) through recognition of four families including Oculatellaceae fam. nov. and Trichocoleaceae fam. nov. and six new genera containing 14 species</mods:title>
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<mods:namePart id="AB96D0E680652B2A5007CC4E3D15FDD5">Mai, Truc</mods:namePart>
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<mods:affiliation id="740B578B99FBBF9AB6296D1BDB79EBBC">Department of Biology, John Carroll University, 1 John Carroll Blvd., University Heights, Ohio 44118, USA & Department of Plant and Environmental Sciences, New Mexico State University, Skeen Hall Room N 127, P. O Box 30003 MSC 3 Q, Las Cruces, New Mexico 88003, USA.</mods:affiliation>
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<mods:namePart id="FF6A30DE3DFEC47B8FFA464FF0B6C20B">Johansen, Jeffrey R.</mods:namePart>
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<mods:affiliation id="512C9FD0AA792EF21A9D620CF95FE9CF">Department of Biology, John Carroll University, 1 John Carroll Blvd., University Heights, Ohio 44118, USA & Department of Botany, Faculty of Science, University of South Bohemia, 31 Branišovská, 37005 České Budějovice, Czech Republic</mods:affiliation>
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<mods:namePart id="A1E5334357CC42BB1BF9A12A79B8AEE9">Pietrasiak, Nicole</mods:namePart>
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<mods:affiliation id="1190BD6EC824F05CB5BC3DB55B09B430">Department of Plant and Environmental Sciences, New Mexico State University, Skeen Hall Room N 127, P. O Box 30003 MSC 3 Q, Las Cruces, New Mexico 88003, USA.</mods:affiliation>
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<mods:namePart id="0661A3DDA3F89BACABE553A84C04435C">Bohunická, Markéta</mods:namePart>
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<mods:namePart id="D12FD65855A0B21E488324CC4D4F799B">Martin, Michael P.</mods:namePart>
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<mods:affiliation id="9FFAE672CF282025A564B1A072AFA765">Department of Biology, John Carroll University, 1 John Carroll Blvd., University Heights, Ohio 44118, USA</mods:affiliation>
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<mods:title id="05AD73C53D9ACF1509A81A67F15FB5DE">Phytotaxa</mods:title>
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<mods:date id="11DFBD654407634C72CD6FE1F2EAF576">2018</mods:date>
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<mods:number id="5CDE2F24C7ABB6F0FEDB424A8BB213C4">2018-08-16</mods:number>
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<mods:number id="6DB95EBA92B34EE84D08E49B87CBB8B9">365</mods:number>
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<mods:url id="FCC98E1341AFBD0AA026688C5D942F2B">http://dx.doi.org/10.11646/phytotaxa.365.1.1</mods:url>
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<mods:classification id="2BBC3DEB4D2FB7829DA75A1D5F02B04C">journal article</mods:classification>
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<mods:identifier id="AC3FC08C2D862889E43175610933043B" type="DOI">10.11646/phytotaxa.365.1.1</mods:identifier>
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<treatment id="03BFDE646C4FFFA7009AF8BAFCEEFBF7" ID-DOI="http://doi.org/10.5281/zenodo.13704888" ID-Zenodo-Dep="13704888" LSID="urn:lsid:plazi:treatment:03BFDE646C4FFFA7009AF8BAFCEEFBF7" httpUri="http://treatment.plazi.org/id/03BFDE646C4FFFA7009AF8BAFCEEFBF7" lastPageId="35" lastPageNumber="36" pageId="33" pageNumber="34">
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<subSubSection id="C30C3CF96C4FFFA5009AF8BAFCCFF8BF" box="[136,855,1808,1833]" pageId="33" pageNumber="34" type="nomenclature">
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<paragraph id="8BA96F726C4FFFA5009AF8BAFCCFF8BF" blockId="33.[136,1452,1808,2085]" box="[136,855,1808,1833]" pageId="33" pageNumber="34">
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<heading id="D0E1D81E6C4FFFA5009AF8BAFCCFF8BF" bold="true" box="[136,855,1808,1833]" fontSize="11" level="1" pageId="33" pageNumber="34" reason="1">
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<taxonomicName id="4C1614F16C4FFFA5009AF8BAFD62F8BF" authority="Mai, Johansen et Bohunicka" authorityName="Mai, Johansen et Bohunicka" authorityYear="2018" box="[136,762,1808,1833]" class="Cyanobacteriia" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="33" pageNumber="34" phylum="Cyanobacteria" rank="species" species="obliquedivisa" status="sp. nov.">
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<emphasis id="B962B3606C4FFFA5009AF8BAFE39F8BF" bold="true" box="[136,417,1808,1833]" italics="true" pageId="33" pageNumber="34">Timaviella obliquedivisa</emphasis>
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Mai, Johansen
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<emphasis id="B962B3606C4FFFA5024CF8BAFDEAF8BF" bold="true" box="[606,626,1808,1833]" italics="true" pageId="33" pageNumber="34">et</emphasis>
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Bohunická
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</taxonomicName>
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||
<emphasis id="B962B3606C4FFFA50313F8BAFCCFF8BF" bold="true" box="[769,855,1808,1833]" italics="true" pageId="33" pageNumber="34">
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<taxonomicNameLabel id="A2510E1B6C4FFFA50313F8BAFCCFF8BF" box="[769,855,1808,1833]" pageId="33" pageNumber="34" rank="species">sp. nov.</taxonomicNameLabel>
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</emphasis>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C30C3CF96C4FFFA5009AF89EFC4EF82F" pageId="33" pageNumber="34" type="diagnosis">
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<paragraph id="8BA96F726C4FFFA5009AF89EFC4EF82F" blockId="33.[136,1452,1808,2085]" pageId="33" pageNumber="34">
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<emphasis id="B962B3606C4FFFA5009AF89EFE9DF8DB" bold="true" box="[136,261,1844,1869]" pageId="33" pageNumber="34">Diagnosis:</emphasis>
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―Similar to
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<emphasis id="B962B3606C4FFFA50188F89EFD8BF8DB" box="[410,531,1844,1869]" italics="true" pageId="33" pageNumber="34">
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<taxonomicName id="4C1614F16C4FFFA50188F89EFD97F8DB" box="[410,527,1844,1869]" class="Cyanobacteriia" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="33" pageNumber="34" phylum="Cyanobacteria" rank="species" species="radians">T. radians</taxonomicName>
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,
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</emphasis>
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but differing in the profuse single and double false-branching and the coloration of trichomes, as well as the shorter D1-D1’ helix. V3 helix almost identical in shape to V3 helix of
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<taxonomicName id="4C1614F16C4FFFA504CFF8F2FA33F8E7" box="[1245,1451,1880,1905]" pageId="33" pageNumber="34">
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<emphasis id="B962B3606C4FFFA504CFF8F2FACBF8E7" box="[1245,1363,1880,1905]" italics="true" pageId="33" pageNumber="34">Timaviella</emphasis>
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species
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</taxonomicName>
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WMT-WP7-NPA in shape and sequence (
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<figureCitation id="132D73F76C4FFFA50274F8D6FD2EF803" box="[614,694,1916,1941]" captionStart="FIGURE 9" captionStartId="19.[136,229,1958,1979]" captionTargetBox="[229,912,769,1871]" captionTargetId="figure-135@19.[151,1436,768,1875]" captionTargetPageId="19" captionText="FIGURE 9. V3 helices of species described in Oculatellaceae. All species described have this structure. The V3 helix of Cartusia aeruginosa is missing because we do not have the full length of its ITS region." figureDoi="http://doi.org/10.5281/zenodo.13704943" httpUri="https://zenodo.org/record/13704943/files/figure.png" pageId="33" pageNumber="34">Fig. 9j</figureCitation>
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). Box B helix also similar to both other species, but with notable differences in all conserved domains of the ITS region (
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<figureCitation id="132D73F76C4FFFA502EBF80AFCCEF82F" box="[761,854,1952,1977]" captionStart="FIGURE 6" captionStartId="15.[136,229,1976,1997]" captionTargetBox="[157,1425,273,1857]" captionTargetId="figure-14@15.[151,1436,267,1882]" captionTargetPageId="15" captionText="FIGURE 6. D1-D1’ stems of species described in Oculatellaceae.The stem structures of genera described previously in other publications (Oculatella, Thermoleptolyngbya, Timaviella) or in publications under provision (Trichotorquatus) are not shown here." figureDoi="http://doi.org/10.5281/zenodo.13704935" httpUri="https://zenodo.org/record/13704935/files/figure.png" pageId="33" pageNumber="34">Figs. 6k</figureCitation>
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,
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<figureCitation id="132D73F76C4FFFA50370F80AFCE2F82F" box="[866,890,1952,1977]" captionStart="FIGURE 7" captionStartId="17.[136,229,1928,1949]" captionTargetBox="[314,1274,759,1806]" captionTargetId="figure-238@17.[311,1276,751,1831]" captionTargetPageId="17" captionText="FIGURE 7. Box B helices of species described in Oculatellaceae. The structures of genera described previously in other publications (Oculatella, Thermoleptolyngbya, Timaviella) or in publications under provision (Trichotorquatus) are not shown here." figureDoi="http://doi.org/10.5281/zenodo.13704937" httpUri="https://zenodo.org/record/13704937/files/figure.png" pageId="33" pageNumber="34">7j</figureCitation>
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,
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<figureCitation id="132D73F76C4FFFA50394F80AFC3CF82F" box="[902,932,1952,1977]" captionStart="FIGURE 8" captionStartId="18.[136,229,1187,1208]" captionTargetBox="[152,1434,425,1107]" captionTargetId="figure-143@18.[151,1436,422,1162]" captionTargetPageId="18" captionText="FIGURE 8. V2 helices of species described in Oculatellaceae. Several species do not have this structure, including Pegethrix convoluta, P. indistincta, Antartic Pegethrix species, Cartusia fontana¸ Kaiparowitsia implicata." figureDoi="http://doi.org/10.5281/zenodo.13704941" httpUri="https://zenodo.org/record/13704941/files/figure.png" pageId="33" pageNumber="34">8h</figureCitation>
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,
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<figureCitation id="132D73F76C4FFFA503A2F80AFC51F82F" box="[944,969,1952,1977]" captionStart="FIGURE 9" captionStartId="19.[136,229,1958,1979]" captionTargetBox="[229,912,769,1871]" captionTargetId="figure-135@19.[151,1436,768,1875]" captionTargetPageId="19" captionText="FIGURE 9. V3 helices of species described in Oculatellaceae. All species described have this structure. The V3 helix of Cartusia aeruginosa is missing because we do not have the full length of its ITS region." figureDoi="http://doi.org/10.5281/zenodo.13704943" httpUri="https://zenodo.org/record/13704943/files/figure.png" pageId="33" pageNumber="34">9j</figureCitation>
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).
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</paragraph>
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</subSubSection>
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<subSubSection id="C30C3CF96C4FFFA700AFF86EFE71FE23" lastPageId="35" lastPageNumber="36" pageId="33" pageNumber="34" type="description">
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<paragraph id="8BA96F726C4FFFA600AFF86EFDDAFEDF" blockId="33.[136,1452,1808,2085]" lastBlockId="34.[136,1452,160,329]" lastPageId="34" lastPageNumber="35" pageId="33" pageNumber="34">
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<emphasis id="B962B3606C4FFFA500AFF86EFEF5F84B" bold="true" box="[189,365,1988,2013]" pageId="33" pageNumber="34">Description:—</emphasis>
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Colony radially spreading, compact, firm, leathery, sometimes mounded, dark green, with yellowed margins near senescence. Filaments, untapered to slightly tapered (
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<figureCitation id="132D73F76C4FFFA503E4F842FBE7F797" box="[1014,1151,2024,2049]" captionStart="FIGURE 17" captionStartId="34.[136,229,1993,2014]" captionTargetBox="[245,1342,350,1965]" captionTargetId="figure-93@34.[245,1342,350,1965]" captionTargetPageId="34" captionText="FIGURE 17. Timaviella obliquedivisa. A–B. Slightly tapering filaments. C–E. Consecutive double and single false-branches in filaments resulting in branch-like structures. F–G. Cell division in oblique angles, causing geminate, knot-like branching or resembling to truebranching. H. Compact coiling of trichomes within sheath. Scale bar 10μm in 1000X magnification." figureDoi="http://doi.org/10.5281/zenodo.13704963" httpUri="https://zenodo.org/record/13704963/files/figure.png" pageId="33" pageNumber="34">Figs. 17a–b</figureCitation>
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), with repeated single and double false branching (
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<figureCitation id="132D73F76C4FFFA50185F7A6FD84F7B3" box="[407,540,2060,2085]" captionStart="FIGURE 17" captionStartId="34.[136,229,1993,2014]" captionTargetBox="[245,1342,350,1965]" captionTargetId="figure-93@34.[245,1342,350,1965]" captionTargetPageId="34" captionText="FIGURE 17. Timaviella obliquedivisa. A–B. Slightly tapering filaments. C–E. Consecutive double and single false-branches in filaments resulting in branch-like structures. F–G. Cell division in oblique angles, causing geminate, knot-like branching or resembling to truebranching. H. Compact coiling of trichomes within sheath. Scale bar 10μm in 1000X magnification." figureDoi="http://doi.org/10.5281/zenodo.13704963" httpUri="https://zenodo.org/record/13704963/files/figure.png" pageId="33" pageNumber="34">Figs. 17c–e</figureCitation>
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), 2.0–3.2 (3.9) μm wide. Sheath usually thin, soft, colorless, rarely extended past trichome apex), up to 1.3 μm wide. Trichomes false branched, with some branches erect and almost perpendicular to the original axis of the trichome (
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<figureCitation id="132D73F76C4CFFA60210FF6EFDE4FF4B" box="[514,636,196,221]" captionStart="FIGURE 17" captionStartId="34.[136,229,1993,2014]" captionTargetBox="[245,1342,350,1965]" captionTargetId="figure-93@34.[245,1342,350,1965]" captionTargetPageId="34" captionText="FIGURE 17. Timaviella obliquedivisa. A–B. Slightly tapering filaments. C–E. Consecutive double and single false-branches in filaments resulting in branch-like structures. F–G. Cell division in oblique angles, causing geminate, knot-like branching or resembling to truebranching. H. Compact coiling of trichomes within sheath. Scale bar 10μm in 1000X magnification." figureDoi="http://doi.org/10.5281/zenodo.13704963" httpUri="https://zenodo.org/record/13704963/files/figure.png" pageId="34" pageNumber="35">Fig. 17f–h</figureCitation>
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), not constricted at distinctly visible cross-walls, occasionally becoming almost biseriate due to oblique division and compression of cells (
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<figureCitation id="132D73F76C4CFFA60384FF42FC6FFE97" box="[918,1015,232,257]" captionStart="FIGURE 17" captionStartId="34.[136,229,1993,2014]" captionTargetBox="[245,1342,350,1965]" captionTargetId="figure-93@34.[245,1342,350,1965]" captionTargetPageId="34" captionText="FIGURE 17. Timaviella obliquedivisa. A–B. Slightly tapering filaments. C–E. Consecutive double and single false-branches in filaments resulting in branch-like structures. F–G. Cell division in oblique angles, causing geminate, knot-like branching or resembling to truebranching. H. Compact coiling of trichomes within sheath. Scale bar 10μm in 1000X magnification." figureDoi="http://doi.org/10.5281/zenodo.13704963" httpUri="https://zenodo.org/record/13704963/files/figure.png" pageId="34" pageNumber="35">Fig. 17f</figureCitation>
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), 2.0–2.9 μm wide. Necridia present, hormogonia rare. Cells cylindrical, shorter than wide to longer than wide, with parietal thylakoids, often with one large central granule, 1.8–2.7–(3.7) μm long.
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</paragraph>
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<caption id="DF693FFA6C4CFFA6009AF863FBD3F7B0" ID-DOI="http://doi.org/10.5281/zenodo.13704963" ID-Zenodo-Dep="13704963" httpUri="https://zenodo.org/record/13704963/files/figure.png" pageId="34" pageNumber="35" startId="34.[136,229,1993,2014]" targetBox="[245,1342,350,1965]" targetPageId="34" targetType="figure">
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<paragraph id="8BA96F726C4CFFA6009AF863FBD3F7B0" blockId="34.[136,1451,1993,2086]" pageId="34" pageNumber="35">
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<emphasis id="B962B3606C4CFFA6009AF863FE91F848" bold="true" box="[136,265,1993,2014]" pageId="34" pageNumber="35">FIGURE 17.</emphasis>
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<taxonomicName id="4C1614F16C4CFFA6011DF863FE63F848" authorityName="Mai, Johansen et Bohunicka" authorityYear="2018" box="[271,507,1993,2014]" class="Cyanobacteriia" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="34" pageNumber="35" phylum="Cyanobacteria" rank="species" species="obliquedivisa">
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<emphasis id="B962B3606C4CFFA6011DF863FE63F848" box="[271,507,1993,2014]" italics="true" pageId="34" pageNumber="35">Timaviella obliquedivisa</emphasis>
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</taxonomicName>
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. A–B. Slightly tapering filaments. C–E. Consecutive double and single false-branches in filaments resulting in branch-like structures. F–G. Cell division in oblique angles, causing geminate, knot-like branching or resembling to truebranching. H. Compact coiling of trichomes within sheath. Scale bar 10μm in 1000X magnification.
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</paragraph>
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</caption>
|
||
<paragraph id="8BA96F726C4DFFA700AFFF0AFE71FE23" blockId="35.[136,1452,160,1121]" pageId="35" pageNumber="36">
|
||
D1-D1’ helix 63 nucleotides long, with a 3’ unilateral bulge of 8 nucleotides (5’-CAUCCCAA-3’). Mid-helix with a pair of nucleotide mismatch of U/U and two internal loops at position 14–15/41–42 and 20–23/32–36 which is separated from the terminal loop by a 5’-GC:GC-3’ clamp. Terminal loop having sequence 5’-GAAA-3’ (
|
||
<figureCitation id="132D73F76C4DFFA70558FF42FA07FE97" box="[1354,1439,232,257]" captionStart="FIGURE 6" captionStartId="15.[136,229,1976,1997]" captionTargetBox="[157,1425,273,1857]" captionTargetId="figure-14@15.[151,1436,267,1882]" captionTargetPageId="15" captionText="FIGURE 6. D1-D1’ stems of species described in Oculatellaceae.The stem structures of genera described previously in other publications (Oculatella, Thermoleptolyngbya, Timaviella) or in publications under provision (Trichotorquatus) are not shown here." figureDoi="http://doi.org/10.5281/zenodo.13704935" httpUri="https://zenodo.org/record/13704935/files/figure.png" pageId="35" pageNumber="36">Fig. 6k</figureCitation>
|
||
). Box B helix 50 nucleotides long, with several internal loops at position 5/44–46, 8–9/41 and 25–25/31–35, an internal mismatch 5/44–46 probably due to an insertion of an adenine residue. Terminal loop 5 nucleotides long, 5’-UUAAU-3’ (
|
||
<figureCitation id="132D73F76C4DFFA70082FEFEFF46FEFB" box="[144,222,340,365]" captionStart="FIGURE 7" captionStartId="17.[136,229,1928,1949]" captionTargetBox="[314,1274,759,1806]" captionTargetId="figure-238@17.[311,1276,751,1831]" captionTargetPageId="17" captionText="FIGURE 7. Box B helices of species described in Oculatellaceae. The structures of genera described previously in other publications (Oculatella, Thermoleptolyngbya, Timaviella) or in publications under provision (Trichotorquatus) are not shown here." figureDoi="http://doi.org/10.5281/zenodo.13704937" httpUri="https://zenodo.org/record/13704937/files/figure.png" pageId="35" pageNumber="36">Fig. 7j</figureCitation>
|
||
). V2 helix 29 nucleotides long, with one internal loop at position 5–6/23–25 (
|
||
<figureCitation id="132D73F76C4DFFA7042EFEFEFB17FEFB" box="[1084,1167,340,365]" captionStart="FIGURE 8" captionStartId="18.[136,229,1187,1208]" captionTargetBox="[152,1434,425,1107]" captionTargetId="figure-143@18.[151,1436,422,1162]" captionTargetPageId="18" captionText="FIGURE 8. V2 helices of species described in Oculatellaceae. Several species do not have this structure, including Pegethrix convoluta, P. indistincta, Antartic Pegethrix species, Cartusia fontana¸ Kaiparowitsia implicata." figureDoi="http://doi.org/10.5281/zenodo.13704941" httpUri="https://zenodo.org/record/13704941/files/figure.png" pageId="35" pageNumber="36">Fig. 8h</figureCitation>
|
||
). V3 helix 62 nucleotides long, with several internal loops at positions 4/55–57, 11–12/47–50 and 23/34–35, separated from the terminal loop by a 5’-GU:AG-3’ clamp (
|
||
<figureCitation id="132D73F76C4DFFA7019CFE36FE44FE23" box="[398,476,412,437]" captionStart="FIGURE 9" captionStartId="19.[136,229,1958,1979]" captionTargetBox="[229,912,769,1871]" captionTargetId="figure-135@19.[151,1436,768,1875]" captionTargetPageId="19" captionText="FIGURE 9. V3 helices of species described in Oculatellaceae. All species described have this structure. The V3 helix of Cartusia aeruginosa is missing because we do not have the full length of its ITS region." figureDoi="http://doi.org/10.5281/zenodo.13704943" httpUri="https://zenodo.org/record/13704943/files/figure.png" pageId="35" pageNumber="36">Fig. 9j</figureCitation>
|
||
).
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C30C3CF96C4DFFA700AFFE6AFE19FE6B" pageId="35" pageNumber="36" type="etymology">
|
||
<paragraph id="8BA96F726C4DFFA700AFFE6AFE19FE6B" blockId="35.[136,1452,160,1121]" pageId="35" pageNumber="36">
|
||
<emphasis id="B962B3606C4DFFA700AFFE6AFEFCFE4F" bold="true" box="[189,356,448,473]" pageId="35" pageNumber="36">Etymology:—</emphasis>
|
||
<emphasis id="B962B3606C4DFFA70176FE6AFE5CFE4F" box="[356,452,448,473]" italics="true" pageId="35" pageNumber="36">obliquus</emphasis>
|
||
(L.): oblique; divisus (L.) divided; referring to the obliquely dividing cells that give rise to biseriate trichomes.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C30C3CF96C4DFFA700AFFDA2FCEEFBF7" pageId="35" pageNumber="36" type="materials_examined">
|
||
<paragraph id="8BA96F726C4DFFA700AFFDA2FBD4FD1B" blockId="35.[136,1452,160,1121]" pageId="35" pageNumber="36">
|
||
<emphasis id="B962B3606C4DFFA700AFFDA2FEC7FDB7" bold="true" box="[189,351,520,545]" pageId="35" pageNumber="36">Type locality:</emphasis>
|
||
―Big Horn Seep Wall, Grand Staircase-Escalante National Monument,
|
||
<geoCoordinate id="EE2209B56C4DFFA70497FDA2FABEFDB7" box="[1157,1318,520,545]" degrees="37" direction="north" minutes="43.012" orientation="latitude" pageId="35" pageNumber="36" precision="1" value="37.716866">37°43.012’ N-</geoCoordinate>
|
||
<geoCoordinate id="EE2209B56C4DFFA70537FDA2FF3BFDD3" degrees="111" direction="west" minutes="28.273" orientation="longitude" pageId="35" pageNumber="36" precision="1" value="-111.471214">111°28.273’ W</geoCoordinate>
|
||
, collected on
|
||
<date id="FFA849B26C4DFFA70154FD86FE66FDD3" box="[326,510,556,581]" pageId="35" pageNumber="36" value="2006-08-15">15 August 2006</date>
|
||
by Markéta Bohunická. Hanging garden (concave wet rock face in a grotto with vascular plants hanging from the rock) on a sandstone rock wall in the Carmel-Page formation, partly covered with organic debris, mosses and vascular plants, in the
|
||
<collectionCode id="ED07F7B76C4DFFA702A5FDDEFC84FD1B" box="[695,796,628,653]" pageId="35" pageNumber="36">GSENM</collectionCode>
|
||
, Kane County,
|
||
<collectingRegion id="49D2A1906C4DFFA703DAFDDEFB99FD1B" box="[968,1025,628,653]" country="United States of America" name="Utah" pageId="35" pageNumber="36">Utah</collectingRegion>
|
||
,
|
||
<collectingCountry id="F3012FE26C4DFFA7041FFDDEFBD1FD1B" box="[1037,1097,628,653]" name="United States of America" pageId="35" pageNumber="36">USA</collectingCountry>
|
||
.
|
||
</paragraph>
|
||
<paragraph id="8BA96F726C4DFFA700AFFD32FE8FFD43" blockId="35.[136,1452,160,1121]" pageId="35" pageNumber="36">
|
||
<materialsCitation id="3B7E652F6C4DFFA700AFFD32FE8FFD43" collectionCode="BRY" collectorName="Monte L. Bean Museum" location="Utah" pageId="35" pageNumber="36" specimenCode="BRY37787" specimenCount="1" stateProvince="Utah" typeStatus="holotype">
|
||
<emphasis id="B962B3606C4DFFA700AFFD32FD8FFD27" bold="true" box="[189,535,664,689]" pageId="35" pageNumber="36">
|
||
<typeStatus id="54ADD1D06C4DFFA700AFFD32FEB2FD27" box="[189,298,664,689]" pageId="35" pageNumber="36" type="holotype">Holotype</typeStatus>
|
||
here designated:—
|
||
</emphasis>
|
||
<specimenCode id="DBB0C7096C4DFFA70204FD32FD05FD27" box="[534,669,664,689]" collectionCode="BRY" country="USA" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15673" lsid="urn:lsid:biocol.org:col:15673" name="Brigham Young University - S.L. Welsh Herbarium" pageId="35" pageNumber="36" type="Herbarium">BRY37787</specimenCode>
|
||
!, Herbarium for Nonvascular Cryptogams,
|
||
<collectorName id="26E30AA46C4DFFA70499FD32FA3FFD27" box="[1163,1447,664,689]" pageId="35" pageNumber="36">Monte L. Bean Museum</collectorName>
|
||
, Provo,
|
||
<collectingRegion id="49D2A1906C4DFFA700CBFD16FE8BFD43" box="[217,275,700,725]" country="United States of America" name="Utah" pageId="35" pageNumber="36">Utah</collectingRegion>
|
||
.
|
||
</materialsCitation>
|
||
</paragraph>
|
||
<paragraph id="8BA96F726C4DFFA700AFFD4AFE8FFC8B" blockId="35.[136,1452,160,1121]" pageId="35" pageNumber="36">
|
||
<emphasis id="B962B3606C4DFFA700AFFD4AFD9DFD6F" bold="true" box="[189,517,736,761]" pageId="35" pageNumber="36">
|
||
<typeStatus id="54ADD1D06C4DFFA700AFFD4AFE8CFD6F" box="[189,276,736,761]" pageId="35" pageNumber="36" type="isotype">Isotype</typeStatus>
|
||
here designated:—
|
||
</emphasis>
|
||
<collectionCode id="ED07F7B76C4DFFA70217FD4AFDDAFD6F" box="[517,578,736,761]" country="USA" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15673" lsid="urn:lsid:biocol.org:col:15673" name="Brigham Young University - S.L. Welsh Herbarium" pageId="35" pageNumber="36" type="Herbarium">BRY</collectionCode>
|
||
37788!, Herbarium for Nonvascular Cryptogams, Monte L. Bean Museum, Provo,
|
||
<collectingRegion id="49D2A1906C4DFFA700CBFCAEFE8BFC8B" box="[217,275,772,797]" country="United States of America" name="Utah" pageId="35" pageNumber="36">Utah</collectingRegion>
|
||
.
|
||
</paragraph>
|
||
<paragraph id="8BA96F726C4DFFA700AFFC82FF50FC1F" blockId="35.[136,1452,160,1121]" pageId="35" pageNumber="36">
|
||
<emphasis id="B962B3606C4DFFA700AFFC82FE3EFCD7" bold="true" box="[189,422,808,833]" pageId="35" pageNumber="36">Reference strain:—</emphasis>
|
||
GSE-PSE-MK28-08A, Algal Culture Collection at John Carroll University, Cleveland,
|
||
<collectingCountry id="F3012FE26C4DFFA7057EFC82FA30FCD7" box="[1388,1448,808,833]" name="United States of America" pageId="35" pageNumber="36">USA</collectingCountry>
|
||
. Additional reference strain: GSE-PSE-MK23-08B, Algal Culture Collection at John Carroll University, Cleveland,
|
||
<collectingCountry id="F3012FE26C4DFFA7009AFCDAFF5CFC1F" box="[136,196,880,905]" name="United States of America" pageId="35" pageNumber="36">USA</collectingCountry>
|
||
.
|
||
</paragraph>
|
||
<paragraph id="8BA96F726C4DFFA700AFFC3EFCEEFBF7" blockId="35.[136,1452,160,1121]" pageId="35" pageNumber="36">
|
||
<emphasis id="B962B3606C4DFFA700AFFC3EFE2BFC3B" bold="true" box="[189,435,916,941]" pageId="35" pageNumber="36">Taxonomic notes:—</emphasis>
|
||
Attenuated trichomes, erect false branches, and oblique division leading to biseriate trichomes are the defining morphological characteristics of
|
||
<taxonomicName id="4C1614F16C4DFFA7032EFC12FC6AFC47" authorityName="Mai, Johansen et Bohunicka" authorityYear="2018" box="[828,1010,952,977]" class="Cyanobacteriia" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="35" pageNumber="36" phylum="Cyanobacteria" rank="species" species="obliquedivisa">
|
||
<emphasis id="B962B3606C4DFFA7032EFC12FC6AFC47" box="[828,1010,952,977]" italics="true" pageId="35" pageNumber="36">T. obliquedivisa</emphasis>
|
||
</taxonomicName>
|
||
. No previously described species is a match for these characteristics (
|
||
<bibRefCitation id="EF8712836C4DFFA701FAFC76FD2BFC63" author="Sciuto, K. & Moschin, E. & Moro, I." box="[488,691,988,1013]" pageId="35" pageNumber="36" pagination="285 - 323" refId="ref37019" refString="Sciuto, K., Moschin, E. & Moro, I. (2017) Cryptic cyanobacterial diversity in the Giant Cave (Trieste, Italy): the new genus Timaviella (Leptolyngbyaceae). Cryptogamie, Algologie 38: 285 - 323. https: // doi. org / 10.7872 / crya / v 38. iss 4.2017.285" type="journal article" year="2017">
|
||
Sciuto
|
||
<emphasis id="B962B3606C4DFFA7022AFC76FDF1FC63" box="[568,617,988,1013]" italics="true" pageId="35" pageNumber="36">et al</emphasis>
|
||
. 2017
|
||
</bibRefCitation>
|
||
). The secondary structures of the conserved ITS domains are unique in comparison with the same structures from other
|
||
<taxonomicName id="4C1614F16C4DFFA702D6FBAAFCF4FB8F" authorityName="Mai et Johansen" authorityYear="2018" box="[708,876,1024,1049]" class="Cyanobacteriia" family="Oculatellaceae" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="35" pageNumber="36" phylum="Cyanobacteria" rank="family">Oculatellaceae</taxonomicName>
|
||
, but without exceptional features; they look similar to other
|
||
<taxonomicName id="4C1614F16C4DFFA700F7FB8EFE12FBAB" authorityName="Mai et Johansen" authorityYear="2018" box="[229,394,1060,1085]" class="Cyanobacteriia" family="Oculatellaceae" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="35" pageNumber="36" phylum="Cyanobacteria" rank="family">Oculatellaceae</taxonomicName>
|
||
in the basal clamps and absence of side branches. The conserved domains of the 16S–23S had secondary structures unique to this species (see
|
||
<bibRefCitation id="EF8712836C4DFFA702B2FBE2FCF2FBF7" author="Sciuto, K. & Moschin, E. & Moro, I." box="[672,874,1096,1121]" pageId="35" pageNumber="36" pagination="285 - 323" refId="ref37019" refString="Sciuto, K., Moschin, E. & Moro, I. (2017) Cryptic cyanobacterial diversity in the Giant Cave (Trieste, Italy): the new genus Timaviella (Leptolyngbyaceae). Cryptogamie, Algologie 38: 285 - 323. https: // doi. org / 10.7872 / crya / v 38. iss 4.2017.285" type="journal article" year="2017">
|
||
Sciuto
|
||
<emphasis id="B962B3606C4DFFA702FCFBE2FCB8FBF7" box="[750,800,1096,1121]" italics="true" pageId="35" pageNumber="36">et al</emphasis>
|
||
. 2017
|
||
</bibRefCitation>
|
||
).
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |