176 lines
17 KiB
XML
176 lines
17 KiB
XML
<document id="C7076D29D9857B83B5933116D028985B" ID-CLB-Dataset="20680" ID-DOI="10.1099/ijsem.0.002484" ID-GBIF-Dataset="ef4088aa-3e5a-4aef-bf7e-f25eb63f60f0" ID-ISSN="1466-5034" ID-Zenodo-Dep="6048400" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1644596738082" checkinUser="felipe" docAuthor="Yang, You-Jian, Zhang, Yan-Ting, Chen, Guo-Qiang, Cheng, Dan, Qiu, Ji-Guo, He, Qin & He, Jian" docDate="2018" docId="03AC878BFFFE300EFFDE9C721009E841" docLanguage="en" docName="IntJSystEvolMicrobiol.68.1.211-216.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 68 (1)" docSource="http://dx.doi.org/10.1099/ijsem.0.002484" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Paenibacillus shunpengii Yang & Zhang & Chen & Cheng & Qiu & He & He 2018, SP. NOV." docType="treatment" docVersion="8" lastPageNumber="215" masterDocId="FF95FFF3FFFA300AFFA79E051506E936" masterDocTitle="Paenibacillus shunpengii sp. nov., isolated from farmland soil" masterLastPageNumber="216" masterPageNumber="211" pageNumber="215" updateTime="1699310126065" updateUser="ExternalLinkService">
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<mods:title id="21B2CF018C1F77AE59CF4E71C8750DA0">Paenibacillus shunpengii sp. nov., isolated from farmland soil</mods:title>
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<mods:namePart id="4813FBEF9EA2C671527318D516A0ADAA">Yang, You-Jian</mods:namePart>
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<mods:namePart id="5C221084EB4C84767226F2FB0E244C2E">Zhang, Yan-Ting</mods:namePart>
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<mods:roleTerm id="98D3E36E46D402517A7F0F4267075DBB">Author</mods:roleTerm>
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<mods:namePart id="378822D7FD31DDF60453D3669A51C75D">Chen, Guo-Qiang</mods:namePart>
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<mods:namePart id="8B1E78DD1092DDA722C4465DB1BD9B68">Cheng, Dan</mods:namePart>
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<mods:roleTerm id="1C3EC592687ACFBEBAB93973F8477548">Author</mods:roleTerm>
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<mods:namePart id="E771F3C8A429F8A4844EF4E66AB7030F">Qiu, Ji-Guo</mods:namePart>
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<mods:namePart id="2E44305B1B7FD758446930C130B72527">He, Qin</mods:namePart>
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<mods:roleTerm id="04A283DEC5FB8816FDBC8D52E008546A">Author</mods:roleTerm>
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<mods:namePart id="ED10DC48F23EDB6923DA05609AD1CF29">He, Jian</mods:namePart>
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<mods:title id="2089C0870082E29EC24F4DE1632A3CB6">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:part id="8D5D9C202714C96E10F8C906BC9C4C4E">
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<mods:date id="5F4563B9A83BCF31E831A4F3AE1514AD">2018</mods:date>
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<mods:number id="E11D00B25029C6CE5105500BFF646C26">2018-01-01</mods:number>
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<mods:number id="309DF74525B8CB30FF7A33EAF8246978">68</mods:number>
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<mods:identifier id="4910ACA4C28231505C0AC4659702B14C" type="CLB-Dataset">20680</mods:identifier>
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<mods:identifier id="A8739AA47064129BF5A8EC7C7D9A3916" type="DOI">10.1099/ijsem.0.002484</mods:identifier>
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<treatment id="03AC878BFFFE300EFFDE9C721009E841" ID-DOI="http://doi.org/10.5281/zenodo.6309500" ID-GBIF-Taxon="193365014" ID-Zenodo-Dep="6309500" LSID="urn:lsid:plazi:treatment:03AC878BFFFE300EFFDE9C721009E841" httpUri="http://treatment.plazi.org/id/03AC878BFFFE300EFFDE9C721009E841" lastPageNumber="215" pageId="4" pageNumber="215">
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<subSubSection id="C31F6516FFFE300EFFDE9C7214A0EB8F" pageId="4" pageNumber="215" type="nomenclature">
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<paragraph id="8BBA369DFFFE300EFFDE9C7214A0EB8F" blockId="4.[121,760,631,1949]" pageId="4" pageNumber="215">
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<heading id="D0F281F1FFFE300EFFDE9C7214A0EB8F" allCaps="true" bold="true" fontSize="12" level="2" pageId="4" pageNumber="215" reason="3">
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<emphasis id="B971EA8FFFFE300EFFDE9C7214A0EB8F" bold="true" pageId="4" pageNumber="215">
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DESCRIPTION OF
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<taxonomicName id="4C054D1EFFFE300EFEC99C721424EB8F" authority="Yang & Zhang & Chen & Cheng & Qiu & He & He, 2018" authorityName="Yang & Zhang & Chen & Cheng & Qiu & He & He" authorityYear="2018" class="Bacilli" family="Paenibacillaceae" genus="Paenibacillus" kingdom="Bacteria" order="Bacillales" pageId="4" pageNumber="215" phylum="Firmicutes" rank="species" species="shunpengii" status="sp. nov.">
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<emphasis id="B971EA8FFFFE300EFEC99C721424EB8F" bold="true" italics="true" pageId="4" pageNumber="215">PAENIBACILLUS SHUNPENGII</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A24257F4FFFE300EFE8C9C9914A0EB8F" box="[299,422,668,697]" pageId="4" pageNumber="215" rank="species">SP. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C31F6516FFFE300EFFDE9CCD14E1EA0A" pageId="4" pageNumber="215" type="etymology">
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<paragraph id="8BBA369DFFFE300EFFDE9CCD14E1EA0A" blockId="4.[121,760,631,1949]" pageId="4" pageNumber="215">
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<taxonomicName id="4C054D1EFFFE300EFFDE9CCD1486EBD6" authorityName="Yang & Zhang & Chen & Cheng & Qiu & He & He" authorityYear="2018" box="[121,384,712,736]" class="Bacilli" family="Paenibacillaceae" genus="Paenibacillus" kingdom="Bacteria" order="Bacillales" pageId="4" pageNumber="215" phylum="Firmicutes" rank="species" species="shunpengii">
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<emphasis id="B971EA8FFFFE300EFFDE9CCD1486EBD6" box="[121,384,712,736]" italics="true" pageId="4" pageNumber="215">Paenibacillus shunpengii</emphasis>
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</taxonomicName>
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(shun.peng′ i.i. N.L. gen. n.
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<taxonomicName id="4C054D1EFFFE300EFD1C9CCD15BEEBC9" authorityName="Yang & Zhang & Chen & Cheng & Qiu & He & He" authorityYear="2018" class="Bacilli" family="Paenibacillaceae" genus="Paenibacillus" kingdom="Bacteria" order="Bacillales" pageId="4" pageNumber="215" phylum="Firmicutes" rank="species" species="shunpengii">
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<emphasis id="B971EA8FFFFE300EFD1C9CCD15BEEBC9" italics="true" pageId="4" pageNumber="215">shunpengii</emphasis>
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</taxonomicName>
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of Shun-peng, to honour Shun-peng Li, a respected Chinese microbiologist, for his great contributions to China’ s environmental microbiology).
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</paragraph>
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</subSubSection>
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<subSubSection id="C31F6516FFFE300EFFDE9D561009E841" pageId="4" pageNumber="215" type="description">
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<paragraph id="8BBA369DFFFE300EFFDE9D5611D1E9DA" blockId="4.[121,760,631,1949]" lastBlockId="4.[827,1465,182,376]" pageId="4" pageNumber="215">
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Cells are aerobic or facultatively anaerobic, Gram-stainpositive, motile, endospore-forming and rod-shaped (0.4– 0.6×
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). Ellipsoidal spores are formed at terminal positions in swollen sporangia. After 24 h of growth on LB agar, colonies are circular, greyish, smooth, shiny and up to
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<quantity id="4CFD9B78FFFE300EFFDE9DE915B3ED32" box="[121,181,1004,1028]" metricMagnitude="-3" metricUnit="m" metricValue="5.0" pageId="4" pageNumber="215" unit="mm" value="5.0">5 mm</quantity>
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in diameter. Grows at 18–42
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C (optimum 35
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<superScript id="7C709BD5FFFE300EFD039DEF17ADEAC3" attach="right" box="[676,683,1002,1013]" fontSize="6" pageId="4" pageNumber="215">Ǫ</superScript>
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C), pH 6.5–8.0 (optimum pH 7.5) and with 0.0–4.0 % (w/v) NaCl (optimum 0.5 %, w/v). In API 50
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<collectingCountry id="F312760DFFFE300EFE7B9A2C1707ED77" box="[476,513,1065,1089]" name="Switzerland" pageId="4" pageNumber="215">CH</collectingCountry>
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tests, acid is produced from L- arabinose, ribose, D- xylose, fructose, mannose, mannitol,
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<emphasis id="B971EA8FFFFE300EFF679A6D15D4ED49" box="[192,210,1128,1151]" italics="true" pageId="4" pageNumber="215">N</emphasis>
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-acetylgulcosamine, amygdalin, arbutin, aesculin, salicin, celliobiose, maltose, lactose, melibiose, starch and potassium gluconate, but not from glycerol, erythritol, D-arabinose, L- xylose, adonite, xyloside, galactose, glucose, sorbose/sorbitose, rhamnose, dulcitol, inositol, D- sorbitol, methyl a- D- mannopyranoside, methyl a- D- glucopyranoside, sucrose, trehalose, inulin, melezitose, raffinose, glycogen, xylitol, gentiobiose, turanose, D- lyxose, D- tagatose, D-fucose, L- fucose, D- arabitol, L- arabitol, potassium 2-ketogluconate or potassium 5-ketogluconate. In API 20NE tests, utilizes aesculin, ferric citrate, gelatin, 4-nitrophenyl-b-
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<subScript id="178134D8FFFE300EFD789BA5143CECE6" attach="none" fontSize="7" pageId="4" pageNumber="215">D-galactopyranoside</subScript>
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, L- arabinose, D- mannose, D- mannitol,
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<emphasis id="B971EA8FFFFE300EFD7C9BBC17E8ECE6" box="[731,750,1465,1488]" italics="true" pageId="4" pageNumber="215">N</emphasis>
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- acetylglucosamine, maltose and potassium gluconate, but not potassium nitrate,
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<subScript id="178134D8FFFE300EFEDE9BF9148CEF38" attach="right" box="[377,394,1526,1550]" fontSize="7" pageId="4" pageNumber="215">L-</subScript>
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trypophan,
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<subScript id="178134D8FFFE300EFDA99BF91725EF38" attach="right" box="[526,547,1526,1550]" fontSize="7" pageId="4" pageNumber="215">D-</subScript>
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glucose,
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<subScript id="178134D8FFFE300EFD219BF91791EF38" attach="right" box="[646,663,1526,1550]" fontSize="7" pageId="4" pageNumber="215">L-</subScript>
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arginine, urea, capric acid, adipic acid, malic acid, trisodium citrate or phenylacetic acid. In the API ZYM system, positive for cystine arylamidase and negative for esterase C4, esterase lipase C8, lipase C14, leucine arylamidase, valine arylamidase, trypsin, a- chymotrypsin, acid phosphatase, naphthol-AS-BI-phosphohydrolase, a- galactosidase, b- galactosidase, b-glucuronidase, a- glucosidase, b- glucosidase,
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<emphasis id="B971EA8FFFFE300EFDDC98C81788EFD2" box="[635,654,1741,1764]" italics="true" pageId="4" pageNumber="215">N</emphasis>
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-acetyl-b-glucosaminidase, a- mannosidase and a- fucosidase/fucosidase. Voges-Proskauer test is negative. The major cellular fatty acids are anteiso-C
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<subScript id="178134D8FFFE300EFE2E993614B7EE72" attach="left" box="[393,433,1843,1860]" fontSize="7" pageId="4" pageNumber="215">15: 0</subScript>
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, iso-C
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<subScript id="178134D8FFFE300EFE5C99361725EE72" attach="left" box="[507,547,1843,1860]" fontSize="7" pageId="4" pageNumber="215">16: 0</subScript>
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and anteiso-C
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<subScript id="178134D8FFFE300EFD6E993617F4EE72" attach="left" box="[713,754,1843,1860]" fontSize="7" pageId="4" pageNumber="215">17: 0</subScript>
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. The predominant respiratory quinone is MK-7. The polar lipid profile contains diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and phospholipids. Cells are resistant to lincomycin, rifampin, novobiocin, nalidixic acid, bacitracin and polymyxin B.
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</paragraph>
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<materialsCitation id="3B6D3CC0FFFE300EFC9C9F06100DE841" ID-GBIF-Occurrence="3465769301" collectionCode="T" country="China" location="Wenzhou" municipality="The" pageId="4" pageNumber="215" specimenCode="ACCC 19965, KCTC 33849" specimenCount="2" stateProvince="Zhejiang" typeStatus="holotype">
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The
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<typeStatus id="54BE883FFFFE300EFCCA9F01169CE82A" box="[877,922,260,284]" pageId="4" pageNumber="215">type</typeStatus>
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strain, YYJ7-1
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(=
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<specimenCode id="DBA39EE6FFFE300EFBC49F0111F3E82D" box="[1123,1269,259,284]" collectionCode="ACCC" country="China" httpUri="http://grbio.org/cool/tya8-spts" name="Agricultural Culture Collection of China" pageId="4" pageNumber="215">ACCC 19965</specimenCode>
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=
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<specimenCode id="DBA39EE6FFFE300EFAA89F011098E82A" box="[1295,1438,260,284]" collectionCode="KCTC" country="South Korea" httpUri="http://grbio.org/cool/2inw-p49s" name="Korean Collection for Type Cultures" pageId="4" pageNumber="215">KCTC 33849</specimenCode>
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<superScript id="7C709BD5FFFE300EFA399EF810ACE838" attach="none" box="[1438,1450,253,270]" fontSize="7" pageId="4" pageNumber="215">
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</superScript>
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), was isolated from farmland soil in
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,
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<collectingRegion id="49C1F87FFFFE300EFAFB9F27169DE86F" country="China" name="Zhejiang" pageId="4" pageNumber="215">Zhejiang Province</collectingRegion>
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,
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<collectingCountry id="F312760DFFFE300EFC169F4416F7E86F" box="[945,1009,321,345]" name="China" pageId="4" pageNumber="215">China</collectingCountry>
|
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(27
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53′ N 120
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36′ E).
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<collectingMunicipality id="6BDEACE7FFFE300EFAE49F44106AE86F" box="[1347,1388,321,345]" pageId="4" pageNumber="215">The</collectingMunicipality>
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DNA G+C content of the type strain is 39.4 mol%
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</materialsCitation>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |