565 lines
55 KiB
XML
565 lines
55 KiB
XML
<document ID-DOI="10.11646/phytotaxa.532.3.1" ID-GBIF-Dataset="af79770b-d1bd-469c-9fdd-fa4c272ef9c5" ID-ISSN="1179-3163" ID-PMC="PMC7612531" ID-PubMed="35330967" ID-Zenodo-Dep="5964572" checkinTime="1643787647010" checkinUser="plazi" docAuthor="Mikhailyuk, Tatiana, Vinogradova, Oksana, Holzinger, Andreas, Glaser, Karin, Akimov, Yuri & Karsten, Ulf" docDate="2022" docId="DC34075AFD25FFD0FF34F8963906FEDF" docLanguage="en" docName="phytotaxa.532.3.1.pdf" docOrigin="Phytotaxa 532 (3)" docStyle="DocumentStyle:96748F8F1B6C902996E134952A3A36B9.4:Phytotaxa.2014-.journal_article" docStyleId="96748F8F1B6C902996E134952A3A36B9" docStyleName="Phytotaxa.2014-.journal_article" docStyleVersion="4" docTitle="Timaviella dunensis Mikhailyuk & O. M. Vynogr. 2022, sp. nov." docType="treatment" docVersion="8" lastPageNumber="205" masterDocId="200D7F22FD23FFDDFFBCFFAA385AFFDF" masterDocTitle="Timaviella dunensis sp. nov. from sand dunes of the Baltic Sea, Germany, and emendation of Timaviella edaphica (Elenkin) O. M. Vynogr. & Mikhailyuk (Synechococcales, Cyanobacteria) based on an integrative approach" masterLastPageNumber="208" masterPageNumber="192" pageNumber="198" updateTime="1668142526136" updateUser="ExternalLinkService" zenodo-license-figures="UNSPECIFIED" zenodo-license-treatments="UNSPECIFIED">
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<mods:titleInfo>
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<mods:title>Timaviella dunensis sp. nov. from sand dunes of the Baltic Sea, Germany, and emendation of Timaviella edaphica (Elenkin) O. M. Vynogr. & Mikhailyuk (Synechococcales, Cyanobacteria) based on an integrative approach</mods:title>
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<mods:name type="personal">
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Mikhailyuk, Tatiana</mods:namePart>
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<mods:nameIdentifier type="ORCID">0000-0002-7769-2848</mods:nameIdentifier>
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<mods:affiliation>M. G. Kholodny Institute of Botany, National Academy of Sciences of Ukraine, Tereschenkivska Str. 2, Kyiv 01024, Ukraine & Department of Botany, Functional Plant Biology, University of Innsbruck, Sternwartestrasse 15, A- 6020 Innsbruck, Austria & University of Rostock, Institute of Biological Sciences, Department of Applied Ecology and Phycology, Albert-Einstein-Strasse 3, Rostock, D- 18057, Germany & t-mikhailyuk @ ukr. net; https: // orcid. org / 0000 - 0002 - 7769 - 2848</mods:affiliation>
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<mods:nameIdentifier type="email">t-mikhailyuk@ukr.net</mods:nameIdentifier>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Vinogradova, Oksana</mods:namePart>
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<mods:nameIdentifier type="ORCID">0000-0002-9243-8231</mods:nameIdentifier>
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<mods:affiliation>M. G. Kholodny Institute of Botany, National Academy of Sciences of Ukraine, Tereschenkivska Str. 2, Kyiv 01024, Ukraine & o. vinogradova @ gmail. com; https: // orcid. org / 0000 - 0002 - 9243 - 8231</mods:affiliation>
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<mods:nameIdentifier type="email">o.vinogradova@gmail.com</mods:nameIdentifier>
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<mods:name type="personal">
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Holzinger, Andreas</mods:namePart>
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<mods:nameIdentifier type="ORCID">0000-0002-7745-3978</mods:nameIdentifier>
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<mods:affiliation>Department of Botany, Functional Plant Biology, University of Innsbruck, Sternwartestrasse 15, A- 6020 Innsbruck, Austria & andreas. holzinger @ uibk. ac. at; https: // orcid. org / 0000 - 0002 - 7745 - 3978</mods:affiliation>
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<mods:nameIdentifier type="email">andreas.holzinger@uibk.ac.at</mods:nameIdentifier>
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</mods:name>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Glaser, Karin</mods:namePart>
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<mods:nameIdentifier type="ORCID">0000-0002-5962-3603</mods:nameIdentifier>
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<mods:affiliation>University of Rostock, Institute of Biological Sciences, Department of Applied Ecology and Phycology, Albert-Einstein-Strasse 3, Rostock, D- 18057, Germany & karin. glaser @ uni-rostock. de; https: // orcid. org / 0000 - 0002 - 5962 - 3603</mods:affiliation>
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<mods:nameIdentifier type="email">karin.glaser@uni-rostock.de</mods:nameIdentifier>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Akimov, Yuri</mods:namePart>
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<mods:nameIdentifier type="ORCID">0000-0001-6691-1147</mods:nameIdentifier>
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<mods:affiliation>M. G. Kholodny Institute of Botany, National Academy of Sciences of Ukraine, Tereschenkivska Str. 2, Kyiv 01024, Ukraine & yuri. akimov @ gmail. com; https: // orcid. org / 0000 - 0001 - 6691 - 1147</mods:affiliation>
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<mods:nameIdentifier type="email">yuri.akimov@gmail.com</mods:nameIdentifier>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Karsten, Ulf</mods:namePart>
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<mods:nameIdentifier type="ORCID">0000-0002-2955-0757</mods:nameIdentifier>
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<mods:affiliation>University of Rostock, Institute of Biological Sciences, Department of Applied Ecology and Phycology, Albert-Einstein-Strasse 3, Rostock, D- 18057, Germany & ulf. karsten @ uni-rostock. de; https: // orcid. org / 0000 - 0002 - 2955 - 0757</mods:affiliation>
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<mods:nameIdentifier type="email">ulf.karsten@uni-rostock.de</mods:nameIdentifier>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:title>Phytotaxa</mods:title>
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<mods:part>
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<mods:date>2022</mods:date>
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<mods:detail type="pubDate">
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<mods:number>2022-02-02</mods:number>
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</mods:detail>
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<mods:detail type="volume">
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<mods:number>532</mods:number>
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</mods:detail>
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<mods:detail type="issue">
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<mods:number>3</mods:number>
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<mods:extent unit="page">
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<mods:start>192</mods:start>
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<mods:end>208</mods:end>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">10.11646/phytotaxa.532.3.1</mods:identifier>
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<mods:identifier type="GBIF-Dataset">af79770b-d1bd-469c-9fdd-fa4c272ef9c5</mods:identifier>
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<mods:identifier type="ISSN">1179-3163</mods:identifier>
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<mods:identifier type="PMC">PMC7612531</mods:identifier>
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<mods:identifier type="PubMed">35330967</mods:identifier>
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<mods:identifier type="Zenodo-Dep">5964572</mods:identifier>
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<treatment ID-DOI="http://doi.org/10.5281/zenodo.6301108" ID-GBIF-Taxon="193276831" ID-Zenodo-Dep="6301108" LSID="urn:lsid:plazi:treatment:DC34075AFD25FFD0FF34F8963906FEDF" httpUri="http://treatment.plazi.org/id/DC34075AFD25FFD0FF34F8963906FEDF" lastPageId="13" lastPageNumber="205" pageId="6" pageNumber="198">
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<subSubSection box="[136,1129,1852,1879]" pageId="6" pageNumber="198" type="nomenclature">
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<paragraph blockId="6.[136,1129,1852,1879]" box="[136,1129,1852,1879]" pageId="6" pageNumber="198">
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<heading bold="true" box="[136,1129,1852,1879]" fontSize="11" level="1" pageId="6" pageNumber="198" reason="1">
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<emphasis bold="true" box="[136,1129,1852,1879]" pageId="6" pageNumber="198">
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<taxonomicName authority="Mikhailyuk & O.M. Vynogr." authorityName="Mikhailyuk & O. M. Vynogr." authorityYear="2022" box="[136,713,1852,1879]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="6" pageNumber="198" phylum="Cyanobacteria" rank="species" species="dunensis" status="sp. nov.">
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<emphasis bold="true" box="[136,368,1852,1879]" italics="true" pageId="6" pageNumber="198">Timaviella dunensis</emphasis>
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Mikhailyuk & O.M. Vynogr.
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</taxonomicName>
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<emphasis bold="true" box="[720,806,1852,1878]" italics="true" pageId="6" pageNumber="198">
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<taxonomicNameLabel box="[720,806,1852,1878]" pageId="6" pageNumber="198" rank="species">sp. nov.</taxonomicNameLabel>
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</emphasis>
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(
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<figureCitation box="[821,902,1852,1878]" captionStart="FIGURE 3" captionStartId="9.[136,229,1953,1975]" captionTargetBox="[335,1253,190,1914]" captionTargetId="figure-26@9.[309,1279,190,1929]" captionTargetPageId="9" captionText="FIGURE 3. Secondary structure of the main informative helices of region 16S-23S ITS of cultured strains of Timaviella. All differences between strains of T. edaphica (KZ-7-1) and T. dunensis (Us-6-3) are presented in comparison with the authentic strain of T. circinata (GR4). Variable bases are shown with arrows, places of insertions/deletions of base pairs are marked with arrowheads, homological base pairs among different strains are indicated with gray lines. Intraspecific variation inside T. edaphica are shown with the asterisk." figureDoi="http://doi.org/10.5281/zenodo.5964578" httpUri="https://zenodo.org/record/5964578/files/figure.png" pageId="6" pageNumber="198">Figs. 3</figureCitation>
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,
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<figureCitation box="[915,930,1852,1878]" captionStart="FIGURE 5" captionStartId="11.[136,229,1881,1903]" captionTargetBox="[151,1435,281,1857]" captionTargetId="figure-58@11.[151,1435,281,1857]" captionTargetPageId="11" captionText="FIGURE 5. Timaviella dunensis (Us-6-3): A—overview of colony on the surface of agarized medium: thallus prostrate and in growing inside the medium; B, K—filaments in firm hyaline sheath; C—trichome without sheath; D—fragment of trichome with necridia; note elongated, discoid and obliquely dividing cells; E, G—loosely arranged filaments with geminate false branching; F—consecutive single and geminate false branching; H, I—fragments of filaments with trichomes twisted in the sheath; J—formation of hormogonia, cells with granulations. Scale bars: A—50 μm, B–K—10 μm." figureDoi="http://doi.org/10.5281/zenodo.5964586" httpUri="https://zenodo.org/record/5964586/files/figure.png" pageId="6" pageNumber="198">5</figureCitation>
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,
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<figureCitation box="[943,958,1852,1878]" captionStart="FIGURE 6" captionStartId="12.[136,229,1575,1597]" captionTargetBox="[151,1435,190,1551]" captionTargetId="figure-18@12.[151,1435,190,1551]" captionTargetPageId="12" captionText="FIGURE 6. Ultrastructure of original strains of Timaviella with characteristic position of thylakoids arranged more or less parallel in a parietal position. T. edaphica (KZ 7-1-2): fragments of trichomes without sheath (A), in multilayered sheath (B), constricted at cross walls, with cyanophycin granules; cells barrel-shaped, isodiametric (A) to elongated (G), end cells (D), trichomes in longitudinal section (E). T. edaphica (KZ 23-2): end cells (C), trichomes in longitudinal section (F). Timaviella dunensis (Us-6-3): fragments of trichomes in thick sheath (H, I), weakly constricted at cross walls; cells cylindrical, elongated, end cells (J–L); formation of necridia (M). S, sheath, Cy, cyanophycin granules, T, thylakoids. Scale bars = 1µm." figureDoi="http://doi.org/10.5281/zenodo.5964590" httpUri="https://zenodo.org/record/5964590/files/figure.png" pageId="6" pageNumber="198">6</figureCitation>
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, H–M,
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<tableCitation box="[1046,1121,1852,1878]" captionStart="TABLE 4" captionStartId="7.[136,224,528,554]" captionTargetPageId="7" captionText="TABLE 4. Selected molecular and morphological characters of Timaviella species." httpUri="http://table.plazi.org/id/00E2E6C4FD24FFDAFF34FDBA3BA5FDF5" pageId="6" pageNumber="198" tableUuid="00E2E6C4FD24FFDAFF34FDBA3BA5FDF5">Tab. 4</tableCitation>
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)
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</emphasis>
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||
</heading>
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||
</paragraph>
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||
</subSubSection>
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||
<subSubSection pageId="6" pageNumber="198" type="diagnosis">
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||
<paragraph blockId="6.[136,1452,1917,2088]" pageId="6" pageNumber="198">
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||
<emphasis bold="true" box="[136,261,1917,1943]" pageId="6" pageNumber="198">Diagnosis:</emphasis>
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Morphologically and ecologically similar to
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<taxonomicName box="[770,901,1917,1943]" class="Cyanophyceae" family="Oscillatoriaceae" genus="Leptolyngbya" kingdom="Bacteria" order="Nostocales" pageId="6" pageNumber="198" phylum="Cyanobacteria" rank="species" species="edaphica">
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<emphasis box="[770,901,1917,1943]" italics="true" pageId="6" pageNumber="198">T. edaphica</emphasis>
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</taxonomicName>
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differing in the colorless sheath, wider filaments and trichomes, conical end cells, longer Box-B and D1-D1’ helices; structure of V3 helix in the position 9-50 and of basal stem and terminal loop in V2. Differs from
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<taxonomicName box="[689,817,1990,2015]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="6" pageNumber="198" phylum="Cyanobacteria" rank="species" species="circinata">
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<emphasis box="[689,817,1990,2015]" italics="true" pageId="6" pageNumber="198">T. circinata</emphasis>
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</taxonomicName>
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in Box-B and V3 helices length, the structure in the D1- D1’, Box-B and V3 helices, as well as the color of thallus, rare false branching, wider trichomes, parallel thylakoids and presence of necridia.
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</paragraph>
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||
</subSubSection>
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||
<caption ID-Table-UUID="00E2E6C4FD24FFDAFF34FDBA3BA5FDF5" box="[136,1023,528,554]" httpUri="http://table.plazi.org/id/00E2E6C4FD24FFDAFF34FDBA3BA5FDF5" pageId="7" pageNumber="199" startId="7.[136,224,528,554]" targetBox="[155,1971,576,1701]" targetIsTable="true" targetPageId="7">
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||
<paragraph blockId="7.[136,1023,528,554]" box="[136,1023,528,554]" pageId="7" pageNumber="199">
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||
<emphasis bold="true" box="[136,251,528,554]" pageId="7" pageNumber="199">TABLE 4.</emphasis>
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Selected molecular and morphological characters of
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<taxonomicName box="[819,1023,528,554]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" kingdom="Bacteria" order="Synechococcales" pageId="7" pageNumber="199" phylum="Cyanobacteria" rank="species" species="undetermined">
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<emphasis box="[819,932,528,554]" italics="true" pageId="7" pageNumber="199">Timaviella</emphasis>
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species.
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</taxonomicName>
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</paragraph>
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</caption>
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<paragraph pageId="7" pageNumber="199">
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<table box="[155,1971,576,1701]" colsContinueIn="8.[136,1913,635,1592]" gridcols="8" gridrows="11" pageId="7" pageNumber="199">
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||
<tr box="[155,1971,576,599]" gridrow="0" pageId="7" pageNumber="199" rowspan-0="1" rowspan-4="1" rowspan-5="1" rowspan-7="1">
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||
<th box="[339,703,576,599]" colspan="2" colspanRight="1" gridcol="1" gridrow="0" pageId="7" pageNumber="199">
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||
<bibRefCitation author="Sciuto, K. & Moschin, E. & Moro, I." box="[339,545,576,599]" pageId="7" pageNumber="199" pagination="285 - 323" refId="ref10300" refString="Sciuto, K., Moschin, E. & Moro, I. (2017) Cryptic cyanobacterial diversity in the Giant Cave (Trieste, Italy): the new genus Timaviella (Leptolyngbyaceae). Cryptogamie, Algologie 38: 285 - 323. https: // doi. org / 10.7872 / crya / v 38. iss 4.2017.285" type="journal article" year="2017">Sciuto & Moro, 2017</bibRefCitation>
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||
</th>
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||
<th box="[751,1024,576,599]" gridcol="3" gridrow="0" pageId="7" pageNumber="199">
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||
<bibRefCitation author="Mai, T. & Johansen, J. R. & Pietrasiak, N. & Bohunicka, M. & Martin, M. P." box="[751,903,576,599]" pageId="7" pageNumber="199" pagination="1 - 59" refId="ref9575" refString="Mai, T., Johansen, J. R., Pietrasiak, N., Bohunicka, M. & Martin, M. P. (2018) Revision of the Synechococcales (Cyanobacteria) through recognition of four families including Oculatellaceae fam. nov. and Trichocoleaceae fam. nov. and six new genera containing 14 species. Phytotaxa 365 (1): 1 - 59. https: // doi. org / 10.11646 / phytotaxa. 365.1.1" type="journal article" year="2018">
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||
Mai
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||
<emphasis box="[795,844,576,599]" italics="true" pageId="7" pageNumber="199">et al.</emphasis>
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||
, 2018
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||
</bibRefCitation>
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||
</th>
|
||
<th box="[1505,1754,576,599]" gridcol="6" gridrow="0" pageId="7" pageNumber="199">Original data</th>
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||
</tr>
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||
<tr box="[155,1971,606,713]" gridrow="1" pageId="7" pageNumber="199">
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<th box="[155,282,606,713]" gridcol="0" gridrow="1" pageId="7" pageNumber="199">Species сharacter</th>
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<td box="[339,471,606,713]" gridcol="1" gridrow="1" pageId="7" pageNumber="199">
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||
<taxonomicName box="[339,449,631,654]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="7" pageNumber="199" phylum="Cyanobacteria" rank="species" species="circinata">
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<emphasis box="[339,449,631,654]" italics="true" pageId="7" pageNumber="199">T. circinata</emphasis>
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</taxonomicName>
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||
</td>
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||
<td box="[531,703,606,713]" gridcol="2" gridrow="1" pageId="7" pageNumber="199">
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<taxonomicName box="[531,631,631,654]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="7" pageNumber="199" phylum="Cyanobacteria" rank="species" species="karstica">
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<emphasis box="[531,631,631,654]" italics="true" pageId="7" pageNumber="199">T. karstica</emphasis>
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</taxonomicName>
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||
</td>
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||
<td box="[751,1024,606,713]" gridcol="3" gridrow="1" pageId="7" pageNumber="199">
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<taxonomicName box="[751,903,631,654]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="7" pageNumber="199" phylum="Cyanobacteria" rank="species" species="obliquedivisa">
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||
<emphasis box="[751,903,631,654]" italics="true" pageId="7" pageNumber="199">T. obliquedivisa</emphasis>
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</taxonomicName>
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||
</td>
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||
<td box="[1065,1298,606,713]" gridcol="4" gridrow="1" pageId="7" pageNumber="199">
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||
<taxonomicName baseAuthorityName="Guiry & Guiry" baseAuthorityYear="2021" box="[1065,1162,631,654]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="7" pageNumber="199" phylum="Cyanobacteria" rank="species" species="radians">
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||
<emphasis box="[1065,1162,631,654]" italics="true" pageId="7" pageNumber="199">T. radians</emphasis>
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||
</taxonomicName>
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||
</td>
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||
<td box="[1358,1460,606,713]" gridcol="5" gridrow="1" pageId="7" pageNumber="199">
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||
<taxonomicName box="[1358,1459,631,683]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" kingdom="Bacteria" order="Synechococcales" pageId="7" pageNumber="199" phylum="Cyanobacteria" rank="species" species="undetermined">
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<emphasis box="[1358,1459,631,654]" italics="true" pageId="7" pageNumber="199">Timaviella</emphasis>
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sp.
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</taxonomicName>
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WMT-WP7-NPA
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</td>
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||
<td box="[1505,1754,606,713]" gridcol="6" gridrow="1" pageId="7" pageNumber="199">
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||
<taxonomicName box="[1505,1616,631,654]" class="Cyanophyceae" family="Oscillatoriaceae" genus="Leptolyngbya" kingdom="Bacteria" order="Nostocales" pageId="7" pageNumber="199" phylum="Cyanobacteria" rank="species" species="edaphica">
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<emphasis box="[1505,1616,631,654]" italics="true" pageId="7" pageNumber="199">T. edaphica</emphasis>
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</taxonomicName>
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KZ-7-1
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||
</td>
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||
<td box="[1793,1971,606,713]" gridcol="7" gridrow="1" pageId="7" pageNumber="199">
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||
<taxonomicName box="[1793,1900,631,654]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="7" pageNumber="199" phylum="Cyanobacteria" rank="species" species="dunensis">
|
||
<emphasis box="[1793,1900,631,654]" italics="true" pageId="7" pageNumber="199">T. dunensis</emphasis>
|
||
</taxonomicName>
|
||
Us-6-3
|
||
</td>
|
||
</tr>
|
||
<tr box="[155,1971,744,767]" gridrow="2" pageId="7" pageNumber="199">
|
||
<th box="[155,1971,744,767]" colspan="8" colspanRight="7" gridcol="0" gridrow="2" pageId="7" pageNumber="199">Length of regions within the 16S-23S ITS:</th>
|
||
</tr>
|
||
<tr box="[155,1971,798,821]" gridrow="3" pageId="7" pageNumber="199">
|
||
<th box="[155,282,798,821]" gridcol="0" gridrow="3" pageId="7" pageNumber="199">BoxB helix</th>
|
||
<td box="[339,471,798,821]" gridcol="1" gridrow="3" pageId="7" pageNumber="199">52</td>
|
||
<td box="[531,703,798,821]" gridcol="2" gridrow="3" pageId="7" pageNumber="199">46</td>
|
||
<td box="[751,1024,798,821]" gridcol="3" gridrow="3" pageId="7" pageNumber="199">51</td>
|
||
<td box="[1065,1298,798,821]" gridcol="4" gridrow="3" pageId="7" pageNumber="199">35</td>
|
||
<td box="[1358,1460,798,821]" gridcol="5" gridrow="3" pageId="7" pageNumber="199">44</td>
|
||
<td box="[1505,1754,798,821]" gridcol="6" gridrow="3" pageId="7" pageNumber="199">35</td>
|
||
<td box="[1793,1971,798,821]" gridcol="7" gridrow="3" pageId="7" pageNumber="199">48</td>
|
||
</tr>
|
||
<tr box="[155,1971,853,876]" gridrow="4" pageId="7" pageNumber="199">
|
||
<th box="[155,282,853,876]" gridcol="0" gridrow="4" pageId="7" pageNumber="199">D1-D1’ helix</th>
|
||
<td box="[339,471,853,876]" gridcol="1" gridrow="4" pageId="7" pageNumber="199">85</td>
|
||
<td box="[531,703,853,876]" gridcol="2" gridrow="4" pageId="7" pageNumber="199">85</td>
|
||
<td box="[751,1024,853,876]" gridcol="3" gridrow="4" pageId="7" pageNumber="199">63</td>
|
||
<td box="[1065,1298,853,876]" gridcol="4" gridrow="4" pageId="7" pageNumber="199">81</td>
|
||
<td box="[1358,1460,853,876]" gridcol="5" gridrow="4" pageId="7" pageNumber="199">75</td>
|
||
<td box="[1505,1754,853,876]" gridcol="6" gridrow="4" pageId="7" pageNumber="199">67</td>
|
||
<td box="[1793,1971,853,876]" gridcol="7" gridrow="4" pageId="7" pageNumber="199">85</td>
|
||
</tr>
|
||
<tr box="[155,1971,907,930]" gridrow="5" pageId="7" pageNumber="199">
|
||
<th box="[155,282,907,930]" gridcol="0" gridrow="5" pageId="7" pageNumber="199">V2 helix</th>
|
||
<td box="[339,471,907,930]" gridcol="1" gridrow="5" pageId="7" pageNumber="199">10</td>
|
||
<td box="[531,703,907,930]" gridcol="2" gridrow="5" pageId="7" pageNumber="199">9</td>
|
||
<td box="[751,1024,907,930]" gridcol="3" gridrow="5" pageId="7" pageNumber="199">29</td>
|
||
<td box="[1065,1298,907,930]" gridcol="4" gridrow="5" pageId="7" pageNumber="199">12</td>
|
||
<td box="[1358,1460,907,930]" gridcol="5" gridrow="5" pageId="7" pageNumber="199">12</td>
|
||
<td box="[1505,1754,907,930]" gridcol="6" gridrow="5" pageId="7" pageNumber="199">10</td>
|
||
<td box="[1793,1971,907,930]" gridcol="7" gridrow="5" pageId="7" pageNumber="199">10</td>
|
||
</tr>
|
||
<tr box="[155,1971,962,985]" gridrow="6" pageId="7" pageNumber="199">
|
||
<th box="[155,282,962,985]" gridcol="0" gridrow="6" pageId="7" pageNumber="199">V3 helix</th>
|
||
<td box="[339,471,962,985]" gridcol="1" gridrow="6" pageId="7" pageNumber="199">59</td>
|
||
<td box="[531,703,962,985]" gridcol="2" gridrow="6" pageId="7" pageNumber="199">59</td>
|
||
<td box="[751,1024,962,985]" gridcol="3" gridrow="6" pageId="7" pageNumber="199">61</td>
|
||
<td box="[1065,1298,962,985]" gridcol="4" gridrow="6" pageId="7" pageNumber="199">59</td>
|
||
<td box="[1358,1460,962,985]" gridcol="5" gridrow="6" pageId="7" pageNumber="199">61</td>
|
||
<td box="[1505,1754,962,985]" gridcol="6" gridrow="6" pageId="7" pageNumber="199">60</td>
|
||
<td box="[1793,1971,962,985]" gridcol="7" gridrow="6" pageId="7" pageNumber="199">60</td>
|
||
</tr>
|
||
<tr box="[155,1971,1016,1157]" gridrow="7" pageId="7" pageNumber="199">
|
||
<th box="[155,282,1016,1157]" gridcol="0" gridrow="7" pageId="7" pageNumber="199">Thallus</th>
|
||
<td box="[339,471,1016,1157]" gridcol="1" gridrow="7" pageId="7" pageNumber="199">red-brown in colour</td>
|
||
<td box="[531,703,1016,1157]" gridcol="2" gridrow="7" pageId="7" pageNumber="199">red-brown in colour</td>
|
||
<td box="[751,1024,1016,1157]" gridcol="3" gridrow="7" pageId="7" pageNumber="199">radially spreading, compact, firm, leathery, sometimes mounded, darkgreen, with yellowed margins in older parts</td>
|
||
<td box="[1065,1298,1016,1157]" gridcol="4" gridrow="7" pageId="7" pageNumber="199">mounded, leathery, dark olive-brown or dirty olive-green</td>
|
||
<td box="[1358,1460,1016,1157]" gridcol="5" gridrow="7" pageId="7" pageNumber="199">–</td>
|
||
<td box="[1505,1754,1016,1157]" gridcol="6" gridrow="7" pageId="7" pageNumber="199">radially spreading, felt with fleecy surface or firm, leathery, dirty grey-blue-green to dark brown</td>
|
||
<td box="[1793,1971,1016,1157]" gridcol="7" gridrow="7" pageId="7" pageNumber="199">brown, dark olivegreen to bluegreen</td>
|
||
</tr>
|
||
<tr box="[155,1971,1188,1299]" gridrow="8" pageId="7" pageNumber="199">
|
||
<th box="[155,282,1188,1299]" gridcol="0" gridrow="8" pageId="7" pageNumber="199">Filament</th>
|
||
<td box="[339,471,1188,1299]" gridcol="1" gridrow="8" pageId="7" pageNumber="199">long flexuous and curved</td>
|
||
<td box="[531,703,1188,1299]" gridcol="2" gridrow="8" pageId="7" pageNumber="199">long flexuous and curved</td>
|
||
<td box="[751,1024,1188,1299]" gridcol="3" gridrow="8" pageId="7" pageNumber="199">untapered to slightly tapered, 2.0–3.2 (3.9) μm wide</td>
|
||
<td box="[1065,1298,1188,1299]" gridcol="4" gridrow="8" pageId="7" pageNumber="199">relatively short, often clearly widened in meristematic zones</td>
|
||
<td box="[1358,1460,1188,1299]" gridcol="5" gridrow="8" pageId="7" pageNumber="199">–</td>
|
||
<td box="[1505,1754,1188,1299]" gridcol="6" gridrow="8" pageId="7" pageNumber="199">long flexuous and curved, 2.6-4.1 (5.0) μm wide</td>
|
||
<td box="[1793,1971,1188,1299]" gridcol="7" gridrow="8" pageId="7" pageNumber="199">long flexuous and curved, (3.0) 3.8-4.9 (6.0) μm wide</td>
|
||
</tr>
|
||
<tr box="[155,1971,1330,1441]" gridrow="9" pageId="7" pageNumber="199">
|
||
<th box="[155,282,1330,1441]" gridcol="0" gridrow="9" pageId="7" pageNumber="199">False branching</th>
|
||
<td box="[339,471,1330,1441]" gridcol="1" gridrow="9" pageId="7" pageNumber="199">often, single and double</td>
|
||
<td box="[531,703,1330,1441]" gridcol="2" gridrow="9" pageId="7" pageNumber="199">often</td>
|
||
<td box="[751,1024,1330,1441]" gridcol="3" gridrow="9" pageId="7" pageNumber="199">single and double, some branches erect and almost perpendicular to the original axis of the trichome</td>
|
||
<td box="[1065,1298,1330,1441]" gridcol="4" gridrow="9" pageId="7" pageNumber="199">single and double, profused, often consecutive</td>
|
||
<td box="[1358,1460,1330,1441]" gridcol="5" gridrow="9" pageId="7" pageNumber="199">–</td>
|
||
<td box="[1505,1754,1330,1441]" gridcol="6" gridrow="9" pageId="7" pageNumber="199">rarely, single and double</td>
|
||
<td box="[1793,1971,1330,1441]" gridcol="7" gridrow="9" pageId="7" pageNumber="199">rarely, single and double</td>
|
||
</tr>
|
||
<tr box="[155,1971,1473,1701]" gridrow="10" pageId="7" pageNumber="199">
|
||
<th box="[155,282,1473,1701]" gridcol="0" gridrow="10" pageId="7" pageNumber="199">Sheath</th>
|
||
<td box="[339,471,1473,1701]" gridcol="1" gridrow="10" pageId="7" pageNumber="199">colorless, multilayered, thick</td>
|
||
<td box="[531,703,1473,1701]" gridcol="2" gridrow="10" pageId="7" pageNumber="199">colorless, multilayered</td>
|
||
<td box="[751,1024,1473,1701]" gridcol="3" gridrow="10" pageId="7" pageNumber="199">usually thin, soft, colorless, rarely extended past trichome apex, up to 1.3 μm wide</td>
|
||
<td box="[1065,1298,1473,1701]" gridcol="4" gridrow="10" pageId="7" pageNumber="199">thin and scarcely visible to widened and evident, rarely extended past the end of trichome</td>
|
||
<td box="[1358,1460,1473,1701]" gridcol="5" gridrow="10" pageId="7" pageNumber="199">–</td>
|
||
<td box="[1505,1754,1473,1701]" gridcol="6" gridrow="10" pageId="7" pageNumber="199">first thin, colorless or dull grey, later thick, sometimes swollen, slightly to intensely brownish, sometimes with sharply outlined almost blackish outer layer</td>
|
||
<td box="[1793,1971,1473,1701]" gridcol="7" gridrow="10" pageId="7" pageNumber="199">colorless, firm, thick</td>
|
||
</tr>
|
||
</table>
|
||
</paragraph>
|
||
<paragraph blockId="7.[1699,1976,1733,1756]" box="[1699,1976,1733,1756]" pageId="7" pageNumber="199">
|
||
<emphasis box="[1699,1976,1733,1756]" italics="true" pageId="7" pageNumber="199">
|
||
<tableNote box="[1699,1976,1733,1756]" pageId="7" pageNumber="199" targetBox="[155,1971,576,1701]" targetPageId="7">...continued on the next page</tableNote>
|
||
</emphasis>
|
||
</paragraph>
|
||
<caption box="[136,386,579,605]" isContinuationCaption="true" pageId="8" pageNumber="200" startId="8.[136,224,579,605]" targetBox="[136,1913,635,1592]" targetIsTable="true" targetPageId="8">
|
||
<paragraph blockId="8.[136,386,579,605]" box="[136,386,579,605]" pageId="8" pageNumber="200">
|
||
<emphasis bold="true" box="[136,251,579,605]" pageId="8" pageNumber="200">TABLE 4.</emphasis>
|
||
(Continued)
|
||
</paragraph>
|
||
</caption>
|
||
<paragraph pageId="8" pageNumber="200">
|
||
<table box="[136,1913,635,1592]" colsContinueFrom="7.[155,1971,576,1701]" gridcols="8" gridrows="9" pageId="8" pageNumber="200">
|
||
<tr box="[136,1913,635,658]" gridrow="0" pageId="8" pageNumber="200" rowspan-0="1" rowspan-4="1" rowspan-5="1" rowspan-7="1">
|
||
<th box="[320,690,635,658]" colspan="2" colspanRight="1" gridcol="1" gridrow="0" pageId="8" pageNumber="200">
|
||
<bibRefCitation author="Sciuto, K. & Moschin, E. & Moro, I." box="[320,526,635,658]" pageId="8" pageNumber="200" pagination="285 - 323" refId="ref10300" refString="Sciuto, K., Moschin, E. & Moro, I. (2017) Cryptic cyanobacterial diversity in the Giant Cave (Trieste, Italy): the new genus Timaviella (Leptolyngbyaceae). Cryptogamie, Algologie 38: 285 - 323. https: // doi. org / 10.7872 / crya / v 38. iss 4.2017.285" type="journal article" year="2017">Sciuto & Moro, 2017</bibRefCitation>
|
||
</th>
|
||
<th box="[732,900,635,658]" gridcol="3" gridrow="0" pageId="8" pageNumber="200">
|
||
<bibRefCitation author="Mai, T. & Johansen, J. R. & Pietrasiak, N. & Bohunicka, M. & Martin, M. P." box="[732,884,635,658]" pageId="8" pageNumber="200" pagination="1 - 59" refId="ref9575" refString="Mai, T., Johansen, J. R., Pietrasiak, N., Bohunicka, M. & Martin, M. P. (2018) Revision of the Synechococcales (Cyanobacteria) through recognition of four families including Oculatellaceae fam. nov. and Trichocoleaceae fam. nov. and six new genera containing 14 species. Phytotaxa 365 (1): 1 - 59. https: // doi. org / 10.11646 / phytotaxa. 365.1.1" type="journal article" year="2018">
|
||
Mai
|
||
<emphasis box="[776,825,635,658]" italics="true" pageId="8" pageNumber="200">et al.</emphasis>
|
||
, 2018
|
||
</bibRefCitation>
|
||
</th>
|
||
<th box="[1445,1693,635,658]" gridcol="6" gridrow="0" pageId="8" pageNumber="200">Original data</th>
|
||
</tr>
|
||
<tr box="[136,1913,664,742]" gridrow="1" pageId="8" pageNumber="200">
|
||
<th box="[136,245,664,742]" gridcol="0" gridrow="1" pageId="8" pageNumber="200">Species сharacter</th>
|
||
<td box="[320,455,664,742]" gridcol="1" gridrow="1" pageId="8" pageNumber="200">
|
||
<taxonomicName box="[320,430,689,712]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="8" pageNumber="200" phylum="Cyanobacteria" rank="species" species="circinata">
|
||
<emphasis box="[320,430,689,712]" italics="true" pageId="8" pageNumber="200">T. circinata</emphasis>
|
||
</taxonomicName>
|
||
</td>
|
||
<td box="[512,690,664,742]" gridcol="2" gridrow="1" pageId="8" pageNumber="200">
|
||
<taxonomicName box="[512,613,689,712]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="8" pageNumber="200" phylum="Cyanobacteria" rank="species" species="karstica">
|
||
<emphasis box="[512,613,689,712]" italics="true" pageId="8" pageNumber="200">T. karstica</emphasis>
|
||
</taxonomicName>
|
||
</td>
|
||
<td box="[732,900,664,742]" gridcol="3" gridrow="1" pageId="8" pageNumber="200">
|
||
<taxonomicName box="[732,884,689,712]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="8" pageNumber="200" phylum="Cyanobacteria" rank="species" species="obliquedivisa">
|
||
<emphasis box="[732,884,689,712]" italics="true" pageId="8" pageNumber="200">T. obliquedivisa</emphasis>
|
||
</taxonomicName>
|
||
</td>
|
||
<td box="[941,1166,664,742]" gridcol="4" gridrow="1" pageId="8" pageNumber="200">
|
||
<taxonomicName baseAuthorityName="Guiry & Guiry" baseAuthorityYear="2021" box="[941,1037,689,712]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="8" pageNumber="200" phylum="Cyanobacteria" rank="species" species="radians">
|
||
<emphasis box="[941,1037,689,712]" italics="true" pageId="8" pageNumber="200">T. radians</emphasis>
|
||
</taxonomicName>
|
||
</td>
|
||
<td box="[1212,1378,664,742]" gridcol="5" gridrow="1" pageId="8" pageNumber="200">
|
||
<taxonomicName box="[1212,1347,689,712]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" kingdom="Bacteria" order="Synechococcales" pageId="8" pageNumber="200" phylum="Cyanobacteria" rank="species" species="undetermined">
|
||
<emphasis box="[1212,1313,689,712]" italics="true" pageId="8" pageNumber="200">Timaviella</emphasis>
|
||
sp.
|
||
</taxonomicName>
|
||
WMT-WP7-NPA
|
||
</td>
|
||
<td box="[1445,1693,664,742]" gridcol="6" gridrow="1" pageId="8" pageNumber="200">
|
||
<taxonomicName box="[1445,1556,689,712]" class="Cyanophyceae" family="Oscillatoriaceae" genus="Leptolyngbya" kingdom="Bacteria" order="Nostocales" pageId="8" pageNumber="200" phylum="Cyanobacteria" rank="species" species="edaphica">
|
||
<emphasis box="[1445,1556,689,712]" italics="true" pageId="8" pageNumber="200">T. edaphica</emphasis>
|
||
</taxonomicName>
|
||
KZ-7-1
|
||
</td>
|
||
<td box="[1733,1913,664,742]" gridcol="7" gridrow="1" pageId="8" pageNumber="200">
|
||
<taxonomicName box="[1733,1841,689,712]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="8" pageNumber="200" phylum="Cyanobacteria" rank="species" species="dunensis">
|
||
<emphasis box="[1733,1841,689,712]" italics="true" pageId="8" pageNumber="200">T. dunensis</emphasis>
|
||
</taxonomicName>
|
||
Us-6-3
|
||
</td>
|
||
</tr>
|
||
<tr box="[136,1913,773,884]" gridrow="2" pageId="8" pageNumber="200">
|
||
<th box="[136,245,773,884]" gridcol="0" gridrow="2" pageId="8" pageNumber="200">Trichome</th>
|
||
<td box="[320,455,773,884]" gridcol="1" gridrow="2" pageId="8" pageNumber="200">slightly constricted at the cross wall</td>
|
||
<td box="[512,690,773,884]" gridcol="2" gridrow="2" pageId="8" pageNumber="200">slightly constricted at the cross wall</td>
|
||
<td box="[732,900,773,884]" gridcol="3" gridrow="2" pageId="8" pageNumber="200">not constricted at distinctly visible cross walls</td>
|
||
<td box="[941,1166,773,884]" gridcol="4" gridrow="2" pageId="8" pageNumber="200">constricted at distinctly visible cross walls, occasionally forming compact rope-like coils</td>
|
||
<td box="[1212,1378,773,884]" gridcol="5" gridrow="2" pageId="8" pageNumber="200">–</td>
|
||
<td box="[1445,1693,773,884]" gridcol="6" gridrow="2" pageId="8" pageNumber="200">slightly constricted at the cross wall</td>
|
||
<td box="[1733,1913,773,884]" gridcol="7" gridrow="2" pageId="8" pageNumber="200">slightly to distinctly constricted at the cross wall</td>
|
||
</tr>
|
||
<tr box="[136,1913,915,1026]" gridrow="3" pageId="8" pageNumber="200">
|
||
<th box="[136,245,915,1026]" gridcol="0" gridrow="3" pageId="8" pageNumber="200">Cell dimensions</th>
|
||
<td box="[320,455,915,1026]" gridcol="1" gridrow="3" pageId="8" pageNumber="200">1.2–1.8 μm wide, 1.7–4.4 μm long</td>
|
||
<td box="[512,690,915,1026]" gridcol="2" gridrow="3" pageId="8" pageNumber="200">1.2–1.4 μm wide, 3.2–4.2 μm long</td>
|
||
<td box="[732,900,915,1026]" gridcol="3" gridrow="3" pageId="8" pageNumber="200">2.0–2.9 μm wide, 1.8–2.7–(3.7) μm long</td>
|
||
<td box="[941,1166,915,1026]" gridcol="4" gridrow="3" pageId="8" pageNumber="200">1.8–3.7 μm wide, 1.2–2.2 μm long</td>
|
||
<td box="[1212,1378,915,1026]" gridcol="5" gridrow="3" pageId="8" pageNumber="200">–</td>
|
||
<td box="[1445,1693,915,1026]" gridcol="6" gridrow="3" pageId="8" pageNumber="200">2.2–2.6 μmwide 2.2–4.3 μm long</td>
|
||
<td box="[1733,1913,915,1026]" gridcol="7" gridrow="3" pageId="8" pageNumber="200">2.2–3.3 μm wide 2.2–3.5 μm long</td>
|
||
</tr>
|
||
<tr box="[136,1913,1058,1110]" gridrow="4" pageId="8" pageNumber="200">
|
||
<th box="[136,245,1058,1110]" gridcol="0" gridrow="4" pageId="8" pageNumber="200">Apical cell</th>
|
||
<td box="[320,455,1058,1110]" gridcol="1" gridrow="4" pageId="8" pageNumber="200">rounded</td>
|
||
<td box="[512,690,1058,1110]" gridcol="2" gridrow="4" pageId="8" pageNumber="200">rounded</td>
|
||
<td box="[732,900,1058,1110]" gridcol="3" gridrow="4" pageId="8" pageNumber="200">rounded</td>
|
||
<td box="[941,1166,1058,1110]" gridcol="4" gridrow="4" pageId="8" pageNumber="200">rounded, conically rounded or obtuse</td>
|
||
<td box="[1212,1378,1058,1110]" gridcol="5" gridrow="4" pageId="8" pageNumber="200">–</td>
|
||
<td box="[1445,1693,1058,1110]" gridcol="6" gridrow="4" pageId="8" pageNumber="200">rounded</td>
|
||
<td box="[1733,1913,1058,1110]" gridcol="7" gridrow="4" pageId="8" pageNumber="200">rounded or conical</td>
|
||
</tr>
|
||
<tr box="[136,1913,1142,1165]" gridrow="5" pageId="8" pageNumber="200">
|
||
<th box="[136,245,1142,1165]" gridcol="0" gridrow="5" pageId="8" pageNumber="200">Necridia</th>
|
||
<td box="[320,455,1142,1165]" gridcol="1" gridrow="5" pageId="8" pageNumber="200">absent</td>
|
||
<td box="[512,690,1142,1165]" gridcol="2" gridrow="5" pageId="8" pageNumber="200">absent</td>
|
||
<td box="[732,900,1142,1165]" gridcol="3" gridrow="5" pageId="8" pageNumber="200">present</td>
|
||
<td box="[941,1166,1142,1165]" gridcol="4" gridrow="5" pageId="8" pageNumber="200">–</td>
|
||
<td box="[1212,1378,1142,1165]" gridcol="5" gridrow="5" pageId="8" pageNumber="200">–</td>
|
||
<td box="[1445,1693,1142,1165]" gridcol="6" gridrow="5" pageId="8" pageNumber="200">present</td>
|
||
<td box="[1733,1913,1142,1165]" gridcol="7" gridrow="5" pageId="8" pageNumber="200">present</td>
|
||
</tr>
|
||
<tr box="[136,1913,1196,1336]" gridrow="6" pageId="8" pageNumber="200">
|
||
<th box="[136,245,1196,1336]" gridcol="0" gridrow="6" pageId="8" pageNumber="200">Thylakoids</th>
|
||
<td box="[320,455,1196,1336]" gridcol="1" gridrow="6" pageId="8" pageNumber="200">5, parietal, frequently organized in a circular arrangement</td>
|
||
<td box="[512,690,1196,1336]" gridcol="2" gridrow="6" pageId="8" pageNumber="200">4–6, peripherally arranged</td>
|
||
<td box="[732,900,1196,1336]" gridcol="3" gridrow="6" pageId="8" pageNumber="200">parietal</td>
|
||
<td box="[941,1166,1196,1336]" gridcol="4" gridrow="6" pageId="8" pageNumber="200">–</td>
|
||
<td box="[1212,1378,1196,1336]" gridcol="5" gridrow="6" pageId="8" pageNumber="200">–</td>
|
||
<td box="[1445,1693,1196,1336]" gridcol="6" gridrow="6" pageId="8" pageNumber="200">4-6, parietal</td>
|
||
<td box="[1733,1913,1196,1336]" gridcol="7" gridrow="6" pageId="8" pageNumber="200">4–5, peripherally arranged</td>
|
||
</tr>
|
||
<tr box="[136,1913,1368,1479]" gridrow="7" pageId="8" pageNumber="200">
|
||
<th box="[136,245,1368,1479]" gridcol="0" gridrow="7" pageId="8" pageNumber="200">Ecological data</th>
|
||
<td box="[320,455,1368,1479]" gridcol="1" gridrow="7" pageId="8" pageNumber="200">subaerophytic in artificially illuminated carstic cave</td>
|
||
<td box="[512,690,1368,1479]" gridcol="2" gridrow="7" pageId="8" pageNumber="200">subaerophytic in artificially illuminated carstic cave</td>
|
||
<td box="[732,900,1368,1479]" gridcol="3" gridrow="7" pageId="8" pageNumber="200">subaerophytic on wet sandstone rock, in a grotto</td>
|
||
<td box="[941,1166,1368,1479]" gridcol="4" gridrow="7" pageId="8" pageNumber="200">subaerophytic in waterfall, in mats on sandstone rock</td>
|
||
<td box="[1212,1378,1368,1479]" gridcol="5" gridrow="7" pageId="8" pageNumber="200">–</td>
|
||
<td box="[1445,1693,1368,1479]" gridcol="6" gridrow="7" pageId="8" pageNumber="200">edaphic, in biocrusts</td>
|
||
<td box="[1733,1913,1368,1479]" gridcol="7" gridrow="7" pageId="8" pageNumber="200">edaphic, in biocrusts, coastal sand dunes</td>
|
||
</tr>
|
||
<tr box="[136,1913,1510,1592]" gridrow="8" pageId="8" pageNumber="200">
|
||
<th box="[136,245,1510,1592]" gridcol="0" gridrow="8" pageId="8" pageNumber="200">Locality</th>
|
||
<td box="[320,690,1510,1592]" colspan="2" colspanRight="1" gridcol="1" gridrow="8" pageId="8" pageNumber="200">the municipality of Sgonico, Trieste, North-Eastern Italy</td>
|
||
<td box="[732,1166,1510,1592]" colspan="2" colspanRight="1" gridcol="3" gridrow="8" pageId="8" pageNumber="200">Grand Staircase-Escalante National Monument, Kane County, Utah, USA</td>
|
||
<td box="[1212,1378,1510,1592]" gridcol="5" gridrow="8" pageId="8" pageNumber="200">white Mountain Wilderness, California, USA</td>
|
||
<td box="[1445,1693,1510,1592]" gridcol="6" gridrow="8" pageId="8" pageNumber="200">Kazantip Nature Reserve, Crimea, Ukraine</td>
|
||
<td box="[1733,1913,1510,1592]" gridcol="7" gridrow="8" pageId="8" pageNumber="200">vicinities of Zempin, Usedom Island, Germany</td>
|
||
</tr>
|
||
</table>
|
||
</paragraph>
|
||
<caption ID-DOI="http://doi.org/10.5281/zenodo.5964578" ID-Zenodo-Dep="5964578" httpUri="https://zenodo.org/record/5964578/files/figure.png" pageId="9" pageNumber="201" startId="9.[136,229,1953,1975]" targetBox="[335,1253,190,1914]" targetPageId="9">
|
||
<paragraph blockId="9.[136,1452,1953,2083]" pageId="9" pageNumber="201">
|
||
<emphasis bold="true" box="[136,254,1953,1975]" pageId="9" pageNumber="201">FIGURE 3.</emphasis>
|
||
Secondary structure of the main informative helices of region 16S-23S ITS of cultured strains of
|
||
<taxonomicName authorityName="Sciuto & Moro" authorityYear="2017" box="[1196,1297,1953,1974]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="9" pageNumber="201" phylum="Cyanobacteria" rank="genus">
|
||
<emphasis box="[1196,1297,1953,1974]" italics="true" pageId="9" pageNumber="201">Timaviella</emphasis>
|
||
</taxonomicName>
|
||
. All differences between strains of
|
||
<taxonomicName box="[321,435,1989,2011]" class="Cyanophyceae" family="Oscillatoriaceae" genus="Leptolyngbya" kingdom="Bacteria" order="Nostocales" pageId="9" pageNumber="201" phylum="Cyanobacteria" rank="species" species="edaphica">
|
||
<emphasis box="[321,435,1989,2011]" italics="true" pageId="9" pageNumber="201">T. edaphica</emphasis>
|
||
</taxonomicName>
|
||
(KZ-7-1) and
|
||
<taxonomicName box="[580,689,1989,2011]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="9" pageNumber="201" phylum="Cyanobacteria" rank="species" species="dunensis">
|
||
<emphasis box="[580,689,1989,2011]" italics="true" pageId="9" pageNumber="201">T. dunensis</emphasis>
|
||
</taxonomicName>
|
||
(Us-6-3) are presented in comparison with the authentic strain of
|
||
<taxonomicName box="[1340,1452,1990,2011]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="9" pageNumber="201" phylum="Cyanobacteria" rank="species" species="circinata">
|
||
<emphasis box="[1340,1452,1990,2011]" italics="true" pageId="9" pageNumber="201">T. circinata</emphasis>
|
||
</taxonomicName>
|
||
(GR4). Variable bases are shown with arrows, places of insertions/deletions of base pairs are marked with arrowheads, homological base pairs among different strains are indicated with gray lines. Intraspecific variation inside
|
||
<taxonomicName box="[981,1093,2061,2083]" class="Cyanophyceae" family="Oscillatoriaceae" genus="Leptolyngbya" kingdom="Bacteria" order="Nostocales" pageId="9" pageNumber="201" phylum="Cyanobacteria" rank="species" species="edaphica">
|
||
<emphasis box="[981,1093,2061,2083]" italics="true" pageId="9" pageNumber="201">T. edaphica</emphasis>
|
||
</taxonomicName>
|
||
are shown with the asterisk.
|
||
</paragraph>
|
||
</caption>
|
||
<caption ID-DOI="http://doi.org/10.5281/zenodo.5964582" ID-Zenodo-Dep="5964582" httpUri="https://zenodo.org/record/5964582/files/figure.png" pageId="10" pageNumber="202" startId="10.[136,229,1591,1613]" targetBox="[151,1435,190,1567]" targetPageId="10">
|
||
<paragraph blockId="10.[136,1452,1591,1757]" pageId="10" pageNumber="202">
|
||
<emphasis bold="true" box="[136,247,1591,1613]" pageId="10" pageNumber="202">FIGURE 4</emphasis>
|
||
.
|
||
<taxonomicName authorityName="O. M. Vynogr. & Mikhailyuk (Vinogradova & Mikhailyuk" authorityYear="2018" baseAuthorityName="Elenkin" box="[258,452,1591,1612]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="10" pageNumber="202" phylum="Cyanobacteria" rank="species" species="edaphica">
|
||
<emphasis box="[258,452,1591,1612]" italics="true" pageId="10" pageNumber="202">Timaviella edaphica</emphasis>
|
||
</taxonomicName>
|
||
: A, B—overview of colonies on the surface of agarized medium (A—thallus with wooly surface (freshly isolated strain), B—thallus prostrate and in growing inside the medium); C—loosy aggregated filaments; F, H
|
||
<emphasis box="[1189,1210,1628,1649]" italics="true" pageId="10" pageNumber="202">—</emphasis>
|
||
filaments with single and geminate pseudobranches; D—bundle of filaments; E—trichomes slightly constricted and granulated at the cross walls; G—trichomes with obliquely dividing cells; I
|
||
<emphasis box="[432,453,1700,1721]" italics="true" pageId="10" pageNumber="202">—</emphasis>
|
||
trichomes with necridia; J—hormogonia. KZ-7-1-2: A–C, D–E, J, Golos-9-1: F, G, KZ-23-2: H, I. Scale bars: A, B—50 μm, C–J—10 μm.
|
||
</paragraph>
|
||
</caption>
|
||
<subSubSection lastPageId="11" lastPageNumber="203" pageId="10" pageNumber="202" type="description">
|
||
<paragraph blockId="10.[136,1452,1803,2082]" lastBlockId="11.[136,1451,158,256]" lastPageId="11" lastPageNumber="203" pageId="10" pageNumber="202">
|
||
<emphasis bold="true" box="[189,337,1803,1829]" pageId="10" pageNumber="202">Description:</emphasis>
|
||
Thallus radially spreading, expanded, leathery, brownish, dark olive, blue-green to light greenish. Filaments long, variously curved, (3.0) 3.8-4.9 (6.0) μm wide. False branching rare, mostly double. Sheath colourless, firm, thick. Trichomes slightly constricted at cross-walls, occasionally becoming almost biseriate due to oblique division and compression of cells, 2.2–3.3 μm wide. Cells cylindrical, isodiametric to longer than wide, with parietal thylakoids, 2.2–3.5 μm long. End cells rounded to conical. Necridia in both young and senescing trichomes, hormogonia rare. D1- D1’ helix 85 nucleotides long, with a 3’ unilateral bulge at position –/ 73-80, five internal loops at position 10/68, 14- 15/63-64, 20/58, 23/54-55 and 31/46. Terminal loop having sequence 5’-UCUC-3’. Box B helix 48 nucleotides long, with several assymetrical internal loops at position 6/41–42, 9–10/39 and –/30–32. Terminal loop 5 nucleotides long, 5’-AUAAU-3’. V2 helix 10 nucleotides long, terminal loop 4 nucleotides, 5’-AUUA-3’. V3 helix 60 nucleotides long, with several internal loops at positions 4/53–55, 9–10/47–50 and 23/34. Terminal loop having sequence 5’-GAAA-3’.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<caption ID-DOI="http://doi.org/10.5281/zenodo.5964586" ID-Zenodo-Dep="5964586" httpUri="https://zenodo.org/record/5964586/files/figure.png" pageId="11" pageNumber="203" startId="11.[136,229,1881,1903]" targetBox="[151,1435,281,1857]" targetPageId="11">
|
||
<paragraph blockId="11.[136,1452,1881,2047]" pageId="11" pageNumber="203">
|
||
<emphasis bold="true" box="[136,248,1881,1903]" pageId="11" pageNumber="203">FIGURE 5</emphasis>
|
||
.
|
||
<taxonomicName box="[261,453,1881,1902]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="11" pageNumber="203" phylum="Cyanobacteria" rank="species" species="dunensis">
|
||
<emphasis box="[261,453,1881,1902]" italics="true" pageId="11" pageNumber="203">Timaviella dunensis</emphasis>
|
||
</taxonomicName>
|
||
(Us-6-3): A—overview of colony on the surface of agarized medium: thallus prostrate and in growing inside the medium; B, K—filaments in firm hyaline sheath; C—trichome without sheath; D—fragment of trichome with necridia; note elongated, discoid and obliquely dividing cells; E, G—loosely arranged filaments with geminate false branching; F—consecutive single and geminate false branching; H, I—fragments of filaments with trichomes twisted in the sheath; J—formation of hormogonia, cells with granulations. Scale bars: A—50 μm, B–K—10 μm.
|
||
</paragraph>
|
||
</caption>
|
||
<caption ID-DOI="http://doi.org/10.5281/zenodo.5964590" ID-Zenodo-Dep="5964590" httpUri="https://zenodo.org/record/5964590/files/figure.png" pageId="12" pageNumber="204" startId="12.[136,229,1575,1597]" targetBox="[151,1435,190,1551]" targetPageId="12">
|
||
<paragraph blockId="12.[136,1452,1575,1777]" pageId="12" pageNumber="204">
|
||
<emphasis bold="true" box="[136,255,1575,1597]" pageId="12" pageNumber="204">FIGURE 6.</emphasis>
|
||
Ultrastructure of original strains of
|
||
<taxonomicName authorityName="Sciuto & Moro" authorityYear="2017" box="[614,715,1575,1596]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="12" pageNumber="204" phylum="Cyanobacteria" rank="genus">
|
||
<emphasis box="[614,715,1575,1596]" italics="true" pageId="12" pageNumber="204">Timaviella</emphasis>
|
||
</taxonomicName>
|
||
with characteristic position of thylakoids arranged more or less parallel in a parietal position.
|
||
<taxonomicName authorityName="O. M. Vynogr. & Mikhailyuk (Vinogradova & Mikhailyuk" authorityYear="2018" baseAuthorityName="Elenkin" box="[324,437,1611,1633]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="12" pageNumber="204" phylum="Cyanobacteria" rank="species" species="edaphica">
|
||
<emphasis box="[324,437,1611,1633]" italics="true" pageId="12" pageNumber="204">T. edaphica</emphasis>
|
||
</taxonomicName>
|
||
(KZ 7-1-2): fragments of trichomes without sheath (A), in multilayered sheath (B), constricted at cross walls, with cyanophycin granules; cells barrel-shaped, isodiametric (A) to elongated (G), end cells (D), trichomes in longitudinal section (E).
|
||
<taxonomicName authorityName="O. M. Vynogr. & Mikhailyuk (Vinogradova & Mikhailyuk" authorityYear="2018" baseAuthorityName="Elenkin" box="[179,291,1683,1705]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="12" pageNumber="204" phylum="Cyanobacteria" rank="species" species="edaphica">
|
||
<emphasis box="[179,291,1683,1705]" italics="true" pageId="12" pageNumber="204">T. edaphica</emphasis>
|
||
</taxonomicName>
|
||
(KZ 23-2): end cells (C), trichomes in longitudinal section (F).
|
||
<taxonomicName box="[909,1101,1683,1704]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="12" pageNumber="204" phylum="Cyanobacteria" rank="species" species="dunensis">
|
||
<emphasis box="[909,1101,1683,1704]" italics="true" pageId="12" pageNumber="204">Timaviella dunensis</emphasis>
|
||
</taxonomicName>
|
||
(Us-6-3): fragments of trichomes in thick sheath (H, I), weakly constricted at cross walls; cells cylindrical, elongated, end cells (J–L); formation of necridia (M). S, sheath, Cy, cyanophycin granules, T, thylakoids. Scale bars = 1µm.
|
||
</paragraph>
|
||
</caption>
|
||
<subSubSection box="[189,1150,1823,1850]" pageId="12" pageNumber="204" type="etymology">
|
||
<paragraph blockId="12.[136,1451,1823,2030]" box="[189,1150,1823,1850]" pageId="12" pageNumber="204">
|
||
<emphasis bold="true" box="[189,318,1824,1850]" pageId="12" pageNumber="204">Etymology</emphasis>
|
||
: Named for its occurrence in biocrusts on dunes;
|
||
<taxonomicName box="[876,974,1823,1849]" class="Cyanophyceae" family="Oculatellaceae" genus="Timaviella" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Synechococcales" pageId="12" pageNumber="204" phylum="Cyanobacteria" rank="species" species="dunensis">
|
||
<emphasis box="[876,974,1823,1849]" italics="true" pageId="12" pageNumber="204">dunensis</emphasis>
|
||
</taxonomicName>
|
||
(L) = of dunes.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection lastPageId="13" lastPageNumber="205" pageId="12" pageNumber="204" type="materials_examined">
|
||
<paragraph blockId="12.[136,1451,1823,2030]" pageId="12" pageNumber="204">
|
||
<materialsCitation ID-GBIF-Occurrence="3462289302" collectorName="M. G. Kholodny Institute" country="Ukraine" location="National Academy of Sciences" municipality="Kholodny Institute of Botany" pageId="12" pageNumber="204" specimenCount="1" stateProvince="Kyiv" typeStatus="holotype">
|
||
<emphasis bold="true" box="[189,499,1859,1886]" pageId="12" pageNumber="204">
|
||
<typeStatus box="[189,298,1860,1886]" pageId="12" pageNumber="204">Holotype</typeStatus>
|
||
here designated:
|
||
</emphasis>
|
||
KW-A-32531, Algotheca, Herbarium of the
|
||
<collectorName box="[993,1267,1859,1886]" pageId="12" pageNumber="204">
|
||
M.G.
|
||
<collectingMunicipality box="[1058,1267,1859,1885]" pageId="12" pageNumber="204">Kholodny Institute</collectingMunicipality>
|
||
</collectorName>
|
||
of Botany of the
|
||
<location LSID="urn:lsid:plazi:treatment:DC34075AFD25FFD0FF34F8963906FEDF:5142E097FD2FFFD1FF34F8CD39BBF85E" box="[136,481,1895,1921]" country="Ukraine" municipality="Kholodny Institute of Botany" name="National Academy of Sciences" pageId="12" pageNumber="204" stateProvince="Kyiv">National Academy of Sciences</location>
|
||
of
|
||
<collectingCountry box="[518,608,1895,1921]" name="Ukraine" pageId="12" pageNumber="204">Ukraine</collectingCountry>
|
||
(KW),
|
||
<collectingRegion box="[694,751,1895,1921]" country="Ukraine" name="Kyiv" pageId="12" pageNumber="204">Kyiv</collectingRegion>
|
||
,
|
||
<collectingCountry box="[762,856,1895,1921]" name="Ukraine" pageId="12" pageNumber="204">Ukraine</collectingCountry>
|
||
.
|
||
</materialsCitation>
|
||
</paragraph>
|
||
<paragraph blockId="12.[136,1451,1823,2030]" pageId="12" pageNumber="204">
|
||
<emphasis bold="true" box="[189,395,1931,1957]" pageId="12" pageNumber="204">Reference strain:</emphasis>
|
||
Us-6-3 was deposited at the German Collection for Microorganisms and Cell Cultures (
|
||
<collectionCode box="[1389,1451,1932,1958]" country="Germany" httpUri="http://grbio.org/cool/4644-42cg" name="Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH" pageId="12" pageNumber="204">DSM</collectionCode>
|
||
112875), Braunschweig,
|
||
<collectingCountry box="[421,526,1968,1994]" name="Germany" pageId="12" pageNumber="204">Germany</collectingCountry>
|
||
, as well as at culture collection of the M.G. Kholodny Institute of Botany of the National Academy of Sciences of
|
||
<collectingCountry box="[518,608,2003,2029]" name="Ukraine" pageId="12" pageNumber="204">Ukraine</collectingCountry>
|
||
(IBASU-A-754).
|
||
</paragraph>
|
||
<paragraph blockId="13.[136,1451,158,256]" pageId="13" pageNumber="205">
|
||
<emphasis bold="true" box="[189,351,158,184]" pageId="13" pageNumber="205">Type locality:</emphasis>
|
||
<materialsCitation ID-GBIF-Occurrence="3462289303" collectingDate="2013-10-08" country="Germany" county="Zempin" latitude="54.07139" location="The" longLatPrecision="17" longitude="13.967777" municipality="Usedom Island" pageId="13" pageNumber="205" specimenCount="1">
|
||
<location LSID="urn:lsid:plazi:treatment:DC34075AFD25FFD0FF34F8963906FEDF:5142E097FD2EFFD0FEDAFF3439C8FF67" box="[358,402,158,184]" country="Germany" county="Zempin" latitude="54.07139" longLatPrecision="17" longitude="13.967777" municipality="Usedom Island" name="The" pageId="13" pageNumber="205">The</location>
|
||
coast of the
|
||
<location LSID="urn:lsid:plazi:treatment:DC34075AFD25FFD0FF34F8963906FEDF:5142E097FD2EFFD0FDA3FF343ACEFF67" box="[543,660,158,184]" country="Germany" county="Zempin" latitude="54.07139" longLatPrecision="17" longitude="13.967777" municipality="Usedom Island" name="Baltic Sea" pageId="13" pageNumber="205">Baltic Sea</location>
|
||
,
|
||
<collectingMunicipality box="[671,842,158,184]" pageId="13" pageNumber="205">Usedom Island</collectingMunicipality>
|
||
, vicinity of
|
||
<collectingCounty box="[975,1065,158,184]" pageId="13" pageNumber="205">Zempin</collectingCounty>
|
||
,
|
||
<collectingCountry box="[1076,1181,158,184]" name="Germany" pageId="13" pageNumber="205">Germany</collectingCountry>
|
||
,
|
||
<geoCoordinate box="[1192,1331,159,187]" degrees="54" direction="north" minutes="04" orientation="latitude" pageId="13" pageNumber="205" precision="15" seconds="17" value="54.07139">54°04′17″ N</geoCoordinate>
|
||
<geoCoordinate degrees="13" direction="east" minutes="58" orientation="longitude" pageId="13" pageNumber="205" precision="15" seconds="04" value="13.967777">13°58′04″ E</geoCoordinate>
|
||
, collected on
|
||
<date box="[314,491,194,220]" pageId="13" pageNumber="205" value="2013-10-08">
|
||
<collectingDate box="[314,491,194,220]" pageId="13" pageNumber="205" value="2013-10-08">8 October 2013</collectingDate>
|
||
</date>
|
||
by Tatiana Mikhailyuk. Sand dunes, biocrusts with dominance of cyanobacteria and streptophyte algae
|
||
</materialsCitation>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |