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<document ID-DOI="10.1099/ijsem.0.005193" ID-GBIF-Dataset="cd46b772-abb8-4222-b765-7abff0f75896" ID-ISSN="1466-5034" ID-PMC="PMC8895651" ID-PubMed="35060849" ID-Zenodo-Dep="6048767" checkinTime="1644597671982" checkinUser="felipe" docAuthor="Legein, Marie, Wittouck, Stijn &amp; Lebeer, Sarah" docDate="2022" docId="03F387BBFFE8EA0BFF9992A8FB92FA22" docLanguage="en" docName="IntJSystEvolMicrobiol.72.1.005193.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology (005193) 72 (1)" docSource="http://dx.doi.org/10.1099/ijsem.0.005193" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.2:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="2" docTitle="Latilactobacillus fragifolii Legein &amp; Wittouck &amp; Lebeer 2022, SP. NOV." docType="treatment" docVersion="8" lastPageNumber="7" masterDocId="FFCAFFC3FFEDEA0DFFE0970BFFDFFF95" masterDocTitle="Latilactobacillus fragifolii sp. nov., isolated from leaves of a strawberry plant (Fragaria x ananassa)" masterLastPageNumber="9" masterPageNumber="1" pageNumber="6" updateTime="1668130847768" updateUser="ExternalLinkService">
<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
<mods:titleInfo>
<mods:title>Latilactobacillus fragifolii sp. nov., isolated from leaves of a strawberry plant (Fragaria x ananassa)</mods:title>
</mods:titleInfo>
<mods:name type="personal">
<mods:role>
<mods:roleTerm>Author</mods:roleTerm>
</mods:role>
<mods:namePart>Legein, Marie</mods:namePart>
</mods:name>
<mods:name type="personal">
<mods:role>
<mods:roleTerm>Author</mods:roleTerm>
</mods:role>
<mods:namePart>Wittouck, Stijn</mods:namePart>
</mods:name>
<mods:name type="personal">
<mods:role>
<mods:roleTerm>Author</mods:roleTerm>
</mods:role>
<mods:namePart>Lebeer, Sarah</mods:namePart>
</mods:name>
<mods:typeOfResource>text</mods:typeOfResource>
<mods:relatedItem type="host">
<mods:titleInfo>
<mods:title>International Journal of Systematic and Evolutionary Microbiology</mods:title>
</mods:titleInfo>
<mods:part>
<mods:date>2022</mods:date>
<mods:detail type="series">
<mods:title>005193</mods:title>
</mods:detail>
<mods:detail type="pubDate">
<mods:number>2022-01-21</mods:number>
</mods:detail>
<mods:detail type="volume">
<mods:number>72</mods:number>
</mods:detail>
<mods:detail type="issue">
<mods:number>1</mods:number>
</mods:detail>
<mods:extent unit="page">
<mods:start>1</mods:start>
<mods:end>9</mods:end>
</mods:extent>
</mods:part>
</mods:relatedItem>
<mods:location>
<mods:url>http://dx.doi.org/10.1099/ijsem.0.005193</mods:url>
</mods:location>
<mods:classification>journal article</mods:classification>
<mods:identifier type="DOI">10.1099/ijsem.0.005193</mods:identifier>
<mods:identifier type="GBIF-Dataset">cd46b772-abb8-4222-b765-7abff0f75896</mods:identifier>
<mods:identifier type="ISSN">1466-5034</mods:identifier>
<mods:identifier type="PMC">PMC8895651</mods:identifier>
<mods:identifier type="PubMed">35060849</mods:identifier>
<mods:identifier type="Zenodo-Dep">6048767</mods:identifier>
</mods:mods>
<treatment ID-DOI="http://doi.org/10.5281/zenodo.6310198" ID-GBIF-Taxon="193366246" ID-Zenodo-Dep="6310198" LSID="urn:lsid:plazi:treatment:03F387BBFFE8EA0BFF9992A8FB92FA22" httpUri="http://treatment.plazi.org/id/03F387BBFFE8EA0BFF9992A8FB92FA22" lastPageId="6" lastPageNumber="7" pageId="5" pageNumber="6">
<subSubSection box="[121,909,1443,1472]" pageId="5" pageNumber="6" type="nomenclature">
<paragraph blockId="5.[121,1467,1443,1540]" box="[121,909,1443,1472]" pageId="5" pageNumber="6">
<heading allCaps="true" bold="true" box="[121,909,1443,1472]" fontSize="12" level="2" pageId="5" pageNumber="6" reason="3">
<emphasis bold="true" box="[121,909,1443,1472]" pageId="5" pageNumber="6">
PROPOSAL OF
<taxonomicName authority="Legein &amp; Wittouck &amp; Lebeer, 2022" authorityName="Legein &amp; Wittouck &amp; Lebeer" authorityYear="2022" box="[334,786,1443,1472]" class="Bacilli" family="Lactobacillaceae" genus="Latilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="5" pageNumber="7" phylum="Firmicutes" rank="species" species="fragifolii" status="sp. nov.">
<emphasis bold="true" box="[334,786,1443,1472]" italics="true" pageId="5" pageNumber="6">LATILACTOBACILLUS FRAGIFOLII</emphasis>
</taxonomicName>
<taxonomicNameLabel box="[794,909,1443,1472]" pageId="5" pageNumber="6" rank="species">SP. NOV.</taxonomicNameLabel>
</emphasis>
</heading>
</paragraph>
</subSubSection>
<paragraph blockId="5.[121,1467,1443,1540]" lastBlockId="6.[120,1467,1314,1463]" lastPageId="6" lastPageNumber="7" pageId="5" pageNumber="6">
<subSubSection pageId="5" pageNumber="6" type="etymology">
On the basis of the low ANI to the closest
<typeStatus box="[574,620,1485,1509]" pageId="5" pageNumber="6">type</typeStatus>
strain of a known species, isolate AMBP162
<superScript attach="left" box="[1094,1104,1483,1497]" fontSize="6" pageId="5" pageNumber="6">T</superScript>
is considered to represent a novel species within the genus
<taxonomicName authorityName="Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O'Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Ganzle &amp; Lebeer" authorityYear="2020" box="[380,550,1515,1539]" class="Bacilli" family="Lactobacillaceae" genus="Latilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="5" pageNumber="6" phylum="Firmicutes" rank="genus">
<emphasis box="[380,550,1515,1539]" italics="true" pageId="5" pageNumber="6">Latilactobacillus</emphasis>
</taxonomicName>
, for which the name
<taxonomicName authority="Legein &amp; Wittouck &amp; Lebeer, 2022" authorityName="Legein &amp; Wittouck &amp; Lebeer" authorityYear="2022" box="[768,1030,1515,1539]" class="Bacilli" family="Lactobacillaceae" genus="Latilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="5" pageNumber="6" phylum="Firmicutes" rank="species" species="fragifolii" status="sp. nov.">
<emphasis box="[768,1030,1515,1539]" italics="true" pageId="5" pageNumber="6">Latilactobacillus fragifolii</emphasis>
</taxonomicName>
<taxonomicNameLabel box="[1035,1113,1516,1539]" pageId="5" pageNumber="6" rank="species">sp. nov.</taxonomicNameLabel>
is proposed. Twelve other isolates
</subSubSection>
<subSubSection pageId="6" pageNumber="7" type="description">
(AMBP158, AMBP159, AMBP163, AMBP229, AMBP231, AMBP240, AMBP241, AMBP243, AMBP252, AMBP253, AMBP254, AMBP256), which were isolated from the same sample and have high similarity to AMBP162
<superScript attach="left" box="[1107,1117,1344,1358]" fontSize="6" pageId="6" pageNumber="7">T</superScript>
for the 16S rRNA gene and
<emphasis box="[1413,1466,1346,1369]" italics="true" pageId="6" pageNumber="7">rpoA</emphasis>
gene (99.9 and 98.4%, respectively), are considered to belong to the new species as well.
</subSubSection>
</paragraph>
<caption ID-Table-UUID="DF256625FFE8EA08FF999135FD02F912" httpUri="http://table.plazi.org/id/DF256625FFE8EA08FF999135FD02F912" pageId="5" pageNumber="6" startId="5.[121,171,1598,1617]" targetBox="[138,1390,1700,1940]" targetIsTable="true" targetPageId="5">
<paragraph pageId="5" pageNumber="6">
<emphasis bold="true" box="[121,196,1598,1617]" pageId="5" pageNumber="6">Table 3.</emphasis>
Catalase activity of three isolates (AMBP159, AMBP162T, AMBP252) and the type strains of
<emphasis box="[1064,1290,1598,1617]" italics="true" pageId="5" pageNumber="6">Latilactobacillus graminis</emphasis>
(DSM 20719T) and
<emphasis box="[121,347,1625,1644]" italics="true" pageId="5" pageNumber="6">Latilactobacillus curvatus</emphasis>
(DSM 20019T) under four conditions: AN, anaerobiosis; AN+, anaerobiosis with addition of haem and menaquinone; AE, aerobiosis; AE+, aerobiosis with addition of haem and menaquinone
</paragraph>
</caption>
<paragraph pageId="5" pageNumber="6">
<table box="[138,1390,1700,1940]" gridcols="5" gridrows="6" pageId="5" pageNumber="6">
<tr box="[138,1390,1700,1719]" gridrow="0" pageId="5" pageNumber="6">
<th box="[138,332,1700,1719]" gridcol="0" gridrow="0" pageId="5" pageNumber="6">
<emphasis bold="true" box="[138,189,1700,1719]" pageId="5" pageNumber="6">Strain</emphasis>
</th>
<th box="[776,805,1700,1719]" gridcol="1" gridrow="0" pageId="5" pageNumber="6">
<emphasis bold="true" box="[776,805,1700,1719]" pageId="5" pageNumber="6">AN</emphasis>
</th>
<th box="[990,1030,1700,1719]" gridcol="2" gridrow="0" pageId="5" pageNumber="6">
<emphasis bold="true" box="[990,1030,1700,1719]" pageId="5" pageNumber="6">AN+</emphasis>
</th>
<th box="[1181,1207,1700,1719]" gridcol="3" gridrow="0" pageId="5" pageNumber="6">
<emphasis bold="true" box="[1181,1207,1700,1719]" pageId="5" pageNumber="6">AE</emphasis>
</th>
<th box="[1352,1390,1700,1719]" gridcol="4" gridrow="0" pageId="5" pageNumber="6">
<emphasis bold="true" box="[1352,1390,1700,1719]" pageId="5" pageNumber="6">AE+</emphasis>
</th>
</tr>
<tr box="[138,1390,1745,1764]" gridrow="1" pageId="5" pageNumber="6">
<th box="[138,332,1745,1764]" gridcol="0" gridrow="1" pageId="5" pageNumber="6">AMBP159</th>
<td box="[776,805,1745,1764]" gridcol="1" gridrow="1" pageId="5" pageNumber="6">–</td>
<td box="[990,1030,1745,1764]" gridcol="2" gridrow="1" pageId="5" pageNumber="6">+/–</td>
<td box="[1181,1207,1745,1764]" gridcol="3" gridrow="1" pageId="5" pageNumber="6">–</td>
<td box="[1352,1390,1745,1764]" gridcol="4" gridrow="1" pageId="5" pageNumber="6">++</td>
</tr>
<tr box="[138,1390,1789,1808]" gridrow="2" pageId="5" pageNumber="6">
<th box="[138,332,1789,1808]" gridcol="0" gridrow="2" pageId="5" pageNumber="6">AMBP162T</th>
<td box="[776,805,1789,1808]" gridcol="1" gridrow="2" pageId="5" pageNumber="6">–</td>
<td box="[990,1030,1789,1808]" gridcol="2" gridrow="2" pageId="5" pageNumber="6">+/–</td>
<td box="[1181,1207,1789,1808]" gridcol="3" gridrow="2" pageId="5" pageNumber="6">–</td>
<td box="[1352,1390,1789,1808]" gridcol="4" gridrow="2" pageId="5" pageNumber="6">++</td>
</tr>
<tr box="[138,1390,1832,1852]" gridrow="3" pageId="5" pageNumber="6">
<th box="[138,332,1832,1852]" gridcol="0" gridrow="3" pageId="5" pageNumber="6">AMBP252</th>
<td box="[776,805,1832,1852]" gridcol="1" gridrow="3" pageId="5" pageNumber="6">–</td>
<td box="[990,1030,1832,1852]" gridcol="2" gridrow="3" pageId="5" pageNumber="6">+/–</td>
<td box="[1181,1207,1832,1852]" gridcol="3" gridrow="3" pageId="5" pageNumber="6">–</td>
<td box="[1352,1390,1832,1852]" gridcol="4" gridrow="3" pageId="5" pageNumber="6">++</td>
</tr>
<tr box="[138,1390,1877,1896]" gridrow="4" pageId="5" pageNumber="6">
<th box="[138,332,1877,1896]" gridcol="0" gridrow="4" pageId="5" pageNumber="6">
<taxonomicName authority="DSM" authorityName="DSM" box="[138,273,1877,1896]" class="Bacilli" family="Lactobacillaceae" genus="Latilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="5" pageNumber="6" phylum="Firmicutes" rank="species" species="graminis">
<emphasis box="[138,226,1877,1895]" italics="true" pageId="5" pageNumber="6">L. graminis</emphasis>
DSM
</taxonomicName>
20719T
</th>
<td box="[776,805,1877,1896]" gridcol="1" gridrow="4" pageId="5" pageNumber="6">–</td>
<td box="[990,1030,1877,1896]" gridcol="2" gridrow="4" pageId="5" pageNumber="6">–</td>
<td box="[1181,1207,1877,1896]" gridcol="3" gridrow="4" pageId="5" pageNumber="6">–</td>
<td box="[1352,1390,1877,1896]" gridcol="4" gridrow="4" pageId="5" pageNumber="6">–</td>
</tr>
<tr box="[138,1390,1920,1940]" gridrow="5" pageId="5" pageNumber="6">
<th box="[138,332,1920,1940]" gridcol="0" gridrow="5" pageId="5" pageNumber="6">
<taxonomicName authority="DSM" authorityName="DSM" box="[138,272,1920,1939]" class="Bacilli" family="Lactobacillaceae" genus="Latilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="5" pageNumber="6" phylum="Firmicutes" rank="species" species="curvatus">
<emphasis box="[138,225,1921,1939]" italics="true" pageId="5" pageNumber="6">L. curvatus</emphasis>
DSM
</taxonomicName>
20019T
</th>
<td box="[776,805,1920,1940]" gridcol="1" gridrow="5" pageId="5" pageNumber="6">–</td>
<td box="[990,1030,1920,1940]" gridcol="2" gridrow="5" pageId="5" pageNumber="6">–</td>
<td box="[1181,1207,1920,1940]" gridcol="3" gridrow="5" pageId="5" pageNumber="6">–</td>
<td box="[1352,1390,1920,1940]" gridcol="4" gridrow="5" pageId="5" pageNumber="6">–</td>
</tr>
</table>
</paragraph>
<caption ID-DOI="http://doi.org/10.5281/zenodo.6048779" ID-Zenodo-Dep="6048779" httpUri="https://zenodo.org/record/6048779/files/figure.png" pageId="6" pageNumber="7" startId="6.[121,152,1146,1165]" targetBox="[227,1361,181,1093]" targetPageId="6">
<paragraph blockId="6.[121,1467,1146,1218]" pageId="6" pageNumber="7">
<emphasis bold="true" box="[121,175,1146,1165]" pageId="6" pageNumber="7">Fig.4.</emphasis>
Presence of known haem-dependent and manganese-dependent catalase encoding genes in five reference genomes of the genus
<taxonomicName authorityName="Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O'Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Ganzle &amp; Lebeer" authorityYear="2020" box="[1325,1467,1146,1165]" class="Bacilli" family="Lactobacillaceae" genus="Latilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="6" pageNumber="7" phylum="Firmicutes" rank="genus">
<emphasis box="[1325,1467,1146,1165]" italics="true" pageId="6" pageNumber="7">Latilactobacillus</emphasis>
</taxonomicName>
and AMBP162
<superScript attach="none" box="[249,256,1172,1183]" fontSize="5" pageId="6" pageNumber="7">T</superScript>
. Analysis was done by comparing the four known catalase genes from lactic acid bacteria against all predicted proteins from the six
<taxonomicName authorityName="Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O'Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Ganzle &amp; Lebeer" authorityYear="2020" box="[121,263,1199,1218]" class="Bacilli" family="Lactobacillaceae" genus="Latilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="6" pageNumber="7" phylum="Firmicutes" rank="genus">
<emphasis box="[121,263,1199,1218]" italics="true" pageId="6" pageNumber="7">Latilactobacillus</emphasis>
</taxonomicName>
genomes using BLASTp.
</paragraph>
</caption>
<subSubSection pageId="6" pageNumber="7" type="description">
<paragraph blockId="6.[120,1467,1314,1463]" pageId="6" pageNumber="7">
<materialsCitation ID-GBIF-Occurrence="3465857301" pageId="6" pageNumber="7" typeStatus="holotype">
Furthermore, strain AMBP162
<superScript attach="left" box="[1382,1392,1375,1389]" fontSize="6" pageId="6" pageNumber="7">T</superScript>
can be discriminated from the
<typeStatus box="[373,419,1408,1432]" pageId="6" pageNumber="7">type</typeStatus>
strains of
<taxonomicName box="[529,646,1408,1431]" class="Bacilli" family="Lactobacillaceae" genus="Latilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="6" pageNumber="7" phylum="Firmicutes" rank="species" species="graminis">
<emphasis box="[529,646,1408,1431]" italics="true" pageId="6" pageNumber="7">L. graminis</emphasis>
</taxonomicName>
and
<taxonomicName box="[698,814,1408,1431]" class="Bacilli" family="Lactobacillaceae" genus="Latilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="6" pageNumber="7" phylum="Firmicutes" rank="species" species="curvatus">
<emphasis box="[698,814,1408,1431]" italics="true" pageId="6" pageNumber="7">L. curvatus</emphasis>
</taxonomicName>
based on its ability to ferment arabinose and sucrose, and the ability to produce catalase when haem and menaquinone are present in the growth medium.
</materialsCitation>
</paragraph>
</subSubSection>
</treatment>
</document>
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