203 lines
17 KiB
XML
203 lines
17 KiB
XML
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<mods:title id="928EE460BC50E8FB03856BD412B94CD6">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
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<mods:namePart id="92EB9EE4058D0FDDEE3DF5004EA5CC37">Zheng, Jinshui</mods:namePart>
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<mods:namePart id="F58D4C7BACB73FE04EB18B43108C37F5">Harris, Hugh M. B.</mods:namePart>
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<mods:namePart id="FCCA0CF80F67201D50F5A0987D74CA8A">Mattarelli, Paola</mods:namePart>
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<mods:namePart id="C0FB8D585AFF34A934918A4489D5C05B">O’Toole, Paul W.</mods:namePart>
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<mods:namePart id="FA9D6BD5E38D9F00849D8E67FF8B4B68">Pot, Bruno</mods:namePart>
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<mods:namePart id="8AAECBDAE2DBED347068AAB15CF9E6C0">Walter, Jens</mods:namePart>
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<mods:namePart id="7E04B2ABF45585AF4599DE985D70996F">Watanabe, Koichi</mods:namePart>
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<mods:namePart id="952C5D2910F299D6A3F02BB9E8AC8902">Wuyts, Sander</mods:namePart>
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<mods:namePart id="124C636F4979F2B73743BD7F1D6B4E88">Felis, Giovanna E.</mods:namePart>
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<mods:namePart id="C5DB7AC792FFCAF3CC9892C91E6E4C4F">Gänzle, Michael G.</mods:namePart>
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<mods:namePart id="A66592AFECC0C8915C8F290D7BF132D5">Lebeer, Sarah</mods:namePart>
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<mods:title id="15599ADF7AF747CC92CE6079E226E6BD">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:date id="7D2C703332E0546AEE35437B6889D0F3">2020</mods:date>
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<mods:number id="50D1724316BB76EA526919168CAF47BF">2020-04-15</mods:number>
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<mods:number id="CDB43ADD1ED8C462CAD1360639DA9D82">70</mods:number>
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<mods:identifier id="5AC66F86F5A6160314AA4B1782524802" type="DOI">10.1099/ijsem.0.004107</mods:identifier>
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<treatment id="03A8D903D23A0274FC95FC86542236FF" ID-DOI="http://doi.org/10.5281/zenodo.4728789" ID-GBIF-Taxon="181761567" ID-Zenodo-Dep="4728789" LSID="urn:lsid:plazi:treatment:03A8D903D23A0274FC95FC86542236FF" httpUri="http://treatment.plazi.org/id/03A8D903D23A0274FC95FC86542236FF" lastPageNumber="2835" pageId="53" pageNumber="2835">
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<subSubSection id="C31B3B9ED23A0274FC95FC8655EC30AA" pageId="53" pageNumber="2835" type="nomenclature">
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<paragraph id="8BBE6815D23A0274FC95FC8655EC30AA" blockId="53.[827,1473,882,1077]" pageId="53" pageNumber="2835">
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<heading id="D0F6DF79D23A0274FC95FC8655EC30AA" allCaps="true" bold="true" fontSize="12" level="3" pageId="53" pageNumber="2835" reason="0">
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<emphasis id="B975B407D23A0274FC95FC8655EC30AA" bold="true" pageId="53" pageNumber="2835">
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DESCRIPTIONOF
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<taxonomicName id="4C011396D23A0274FB9CFC86554330AA" authority="PARACOLLINOIDES" authorityName="PARACOLLINOIDES" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" class="Bacilli" family="Lactobacillaceae" genus="Secundilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="53" pageNumber="2835" phylum="Firmicutes" rank="species" species="paracollinoides" status="comb. nov.">
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<emphasis id="B975B407D23A0274FB9CFC86554330AA" bold="true" italics="true" pageId="53" pageNumber="2835">SECUNDILACTOBACILLUS PARACOLLINOIDES</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A246097CD23A0274FBE0FC6355EC30AA" box="[1097,1262,919,948]" pageId="53" pageNumber="2835" rank="species">COMB. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C31B3B9ED23A0274FC95FC3552E23615" pageId="53" pageNumber="2835" type="discussion">
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<paragraph id="8BBE6815D23A0274FC95FC35540B372B" blockId="53.[827,1473,882,1077]" pageId="53" pageNumber="2835">
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<taxonomicName id="4C011396D23A0274FC95FC3555B630C7" box="[828,1204,961,985]" class="Bacilli" family="Lactobacillaceae" genus="Secundilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="53" pageNumber="2835" phylum="Firmicutes" rank="species" species="paracollinoides">
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<emphasis id="B975B407D23A0274FC95FC3555B630C7" box="[828,1204,961,985]" italics="true" pageId="53" pageNumber="2835">Secundilactobacillus paracollinoides</emphasis>
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</taxonomicName>
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(pa.ra.col.li.no’i.des. Gr. pref.
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<emphasis id="B975B407D23A0274FCD8FC1552A330E6" box="[881,929,993,1016]" italics="true" pageId="53" pageNumber="2835">para</emphasis>
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beside; N.L. masc. adj.
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<taxonomicName id="4C011396D23A0274FB3AFC1455FD30E6" authorityName="Carr and Davies" authorityYear="1972" box="[1171,1279,992,1016]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="53" pageNumber="2835" phylum="Firmicutes" rank="species" species="collinoides">
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<emphasis id="B975B407D23A0274FB3AFC1455FD30E6" box="[1171,1279,992,1016]" italics="true" pageId="53" pageNumber="2835">collinoides</emphasis>
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</taxonomicName>
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, aspecies epithet; N.L. masc. adj.
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<taxonomicName id="4C011396D23A0274FC77FC0A55783708" box="[990,1146,1022,1046]" class="Bacilli" family="Lactobacillaceae" genus="Secundilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="53" pageNumber="2835" phylum="Firmicutes" rank="species" species="paracollinoides">
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<emphasis id="B975B407D23A0274FC77FC0A55783708" box="[990,1146,1022,1046]" italics="true" pageId="53" pageNumber="2835">paracollinoides</emphasis>
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</taxonomicName>
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beside
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<taxonomicName id="4C011396D23A0274FB62FC0B54523708" authorityName="Carr and Davies" authorityYear="1972" box="[1227,1360,1022,1046]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="53" pageNumber="2835" phylum="Firmicutes" rank="species" species="collinoides">
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<emphasis id="B975B407D23A0274FB62FC0B54523708" box="[1227,1360,1022,1046]" italics="true" pageId="53" pageNumber="2835">S. collinoides</emphasis>
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</taxonomicName>
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, referring to the close relationship with
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<taxonomicName id="4C011396D23A0274FBDDFBEA55FB372B" authorityName="Carr and Davies" authorityYear="1972" box="[1140,1273,1053,1077]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="53" pageNumber="2835" phylum="Firmicutes" rank="species" species="collinoides">
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<emphasis id="B975B407D23A0274FBDDFBEA55FB372B" box="[1140,1273,1053,1077]" italics="true" pageId="53" pageNumber="2835">S. collinoides</emphasis>
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</taxonomicName>
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).
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</paragraph>
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<paragraph id="8BBE6815D23A0274FC95FBBF554C37BE" blockId="53.[828,1467,1099,1184]" pageId="53" pageNumber="2835">
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Basonym:
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<taxonomicName id="4C011396D23A0274FC19FBBF54B5377D" authority="Suzuki et al. 2004" authorityName="Suzuki" authorityYear="2004" box="[944,1463,1099,1123]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="53" pageNumber="2835" phylum="Firmicutes" rank="species" species="paracollinoides">
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<emphasis id="B975B407D23A0274FC19FBBF55E6377D" box="[944,1252,1099,1123]" italics="true" pageId="53" pageNumber="2835">Lactobacillus paracollinoides</emphasis>
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Suzuki
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<emphasis id="B975B407D23A0274FAE9FBB85473377D" box="[1344,1393,1099,1123]" italics="true" pageId="53" pageNumber="2835">et al</emphasis>
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. 2004
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</taxonomicName>
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, 116
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<superScript id="7C74C55DD23A0274FCCBFB9C52763768" attach="none" box="[866,884,1128,1142]" fontSize="6" pageId="53" pageNumber="2835">VP</superScript>
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||
. Strains of this species have been referred toas
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<taxonomicName id="4C011396D23A0274FAC8FB9E527D37BE" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="53" pageNumber="2835" phylum="Firmicutes" rank="species" species="pastorianus">
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<emphasis id="B975B407D23A0274FAC8FB9E527D37BE" italics="true" pageId="53" pageNumber="2835">L. pastorianus</emphasis>
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</taxonomicName>
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prior to 2005 [
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<bibRefCitation id="EF9015E4D23A0274FBB5FB7C554A37BE" author="Ehrmann MA & Vogel RF" box="[1052,1096,1160,1184]" pageId="53" pageNumber="2835" pagination="54 - 56" refId="ref72130" refString="284. Ehrmann MA, Vogel RF. Taxonomic note " Lactobacillus pastorianus " (Van Laer, 1892) a former synonym for Lactobacillus paracollinoides. Syst Appl Microbiol 2005; 28: 54 - 56." type="journal article" year="2005">284</bibRefCitation>
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]
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</paragraph>
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<paragraph id="8BBE6815D23A0274FC95FB4252E23615" blockId="53.[828,1466,1206,1292]" pageId="53" pageNumber="2835">
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Growth is observed at 15 but not at 45 °C [
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<bibRefCitation id="EF9015E4D23A0274FB52FB42542B37D0" author="Suzuki K & Funahashi W & Koyanagi M & Yamashita H." box="[1275,1321,1206,1230]" pageId="53" pageNumber="2835" pagination="115 - 117" refId="ref72168" refString="285. Suzuki K, Funahashi W, Koyanagi M, Yamashita H. Lactobacillus paracollinoides sp. nov., isolated from brewery environments. Int J Syst Evol Microbiol 2004; 54: 115 - 117." type="journal article" year="2004">285</bibRefCitation>
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]. The genome size of the type strain is 3.49 Mbp. The mol% G+C content of DNAis 46.8.
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</paragraph>
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</subSubSection>
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<subSubSection id="C31B3B9ED23A0274FC95FAD5542236FF" pageId="53" pageNumber="2835" type="description">
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<paragraph id="8BBE6815D23A0274FC95FAD552F13646" blockId="53.[828,1467,1313,1368]" pageId="53" pageNumber="2835">Isolated as beer or cider spoilage organisms, and from fermented olives.</paragraph>
|
||
<paragraph id="8BBE6815D23A0274FC95FA9A5476369B" blockId="53.[828,1396,1388,1414]" box="[828,1396,1388,1414]" pageId="53" pageNumber="2835">
|
||
Thetypestrainis LA2
|
||
<superScript id="7C74C55DD23A0274FB8CFA98552D3664" attach="left" box="[1061,1071,1388,1402]" fontSize="6" pageId="53" pageNumber="2835">T</superScript>
|
||
= DSM 15502
|
||
<superScript id="7C74C55DD23A0274FB61FA9855D03664" attach="left" box="[1224,1234,1388,1402]" fontSize="6" pageId="53" pageNumber="2835">T</superScript>
|
||
= JCM 11969
|
||
<superScript id="7C74C55DD23A0274FACFFA98546C3664" attach="none" box="[1382,1390,1388,1402]" fontSize="6" pageId="53" pageNumber="2835">T</superScript>
|
||
.
|
||
</paragraph>
|
||
<paragraph id="8BBE6815D23A0274FC95FA68548036AA" blockId="53.[828,1410,1435,1460]" box="[828,1410,1435,1460]" pageId="53" pageNumber="2835">Genome sequence accession number: AZFD00000000.</paragraph>
|
||
<paragraph id="8BBE6815D23A0274FC95FA3D542236FF" blockId="53.[828,1312,1481,1506]" box="[828,1312,1481,1506]" pageId="53" pageNumber="2835">
|
||
16S rRNA gene accession number:
|
||
<accessionNumber id="9452F5F6D23A0274FB18FA3D541E36FF" box="[1201,1308,1481,1505]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/AJ786665" pageId="53" pageNumber="2835">AJ786665</accessionNumber>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |