183 lines
16 KiB
XML
183 lines
16 KiB
XML
<document ID-DOI="http://dx.doi.org/10.3897/phytokeys.220.97724" ID-Pensoft-Pub="1314-2003-220-127" ID-Pensoft-UUID="2269778DD30E576DA74427AD6718FFA8" ModsDocID="1314-2003-220-127" checkinTime="1678202795424" checkinUser="pensoft" docAuthor="German, Dmitry A., Hendriks, Kasper P., Koch, Marcus A., Lens, Frederic, Lysak, Martin A., Bailey, C. Donovan, Mummenhoff, Klaus & Al-Shehbaz, Ihsan A." docDate="2023" docId="ECC2384AA4A356018AA44291A0E9B181" docLanguage="en" docName="PhytoKeys 220: 127-144" docOrigin="PhytoKeys 220" docPubDate="2023-03-06" docSource="http://dx.doi.org/10.3897/phytokeys.220.97724" docTitle="Heliophila Sond. in Abh. Naturwiss. Verein Hamburg 1: 267. 1846. (1: 1)" docType="treatment" docVersion="1" id="2269778DD30E576DA74427AD6718FFA8" lastPageNumber="127" masterDocId="2269778DD30E576DA74427AD6718FFA8" masterDocTitle="An updated classification of the Brassicaceae (Cruciferae)" masterLastPageNumber="144" masterPageNumber="127" pageNumber="127" updateTime="1678202795424" updateUser="pensoft">
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<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo>
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<mods:title>An updated classification of the Brassicaceae (Cruciferae)</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>German, Dmitry A.</mods:namePart>
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<mods:nameIdentifier type="ORCID">https://orcid.org/0000-0001-7951-1644</mods:nameIdentifier>
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<mods:affiliation>South-Siberian Botanical Garden, Altai State University, Lenin Ave. 61, 656049 Barnaul, Russia</mods:affiliation>
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<mods:nameIdentifier type="email">oreoloma@rambler.ru</mods:nameIdentifier>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Hendriks, Kasper P.</mods:namePart>
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<mods:nameIdentifier type="ORCID">https://orcid.org/0000-0003-0245-8368</mods:nameIdentifier>
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<mods:affiliation>Department of Biology, Botany, University of Osnabrueck, Barbarastrasse 11, 49076 Osnabrueck, Germany & Naturalis Biodiversity Center, Darwinweg 2, 2333 CR Leiden, Netherlands</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Koch, Marcus A.</mods:namePart>
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<mods:nameIdentifier type="ORCID">https://orcid.org/0000-0002-1693-6829</mods:nameIdentifier>
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<mods:affiliation>Department of Biodiversity and Plant Systematics, Centre for Organismal Studies (COS), Heidelberg University, Im Neuenheimer Feld 345, D- 69120 Heidelberg, Germany</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Lens, Frederic</mods:namePart>
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<mods:nameIdentifier type="ORCID">https://orcid.org/0000-0002-5001-0149</mods:nameIdentifier>
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<mods:affiliation>Naturalis Biodiversity Center, Darwinweg 2, 2333 CR Leiden, Netherlands & Institute of Biology Leiden, Leiden University, Sylviusweg 72, 2333 BE Leiden, Netherlands</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Lysak, Martin A.</mods:namePart>
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<mods:nameIdentifier type="ORCID">https://orcid.org/0000-0003-0318-4194</mods:nameIdentifier>
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<mods:affiliation>Central European Institute of Technology (CEITEC) and Faculty of Science, Masaryk University, Kamenice 5, 62500 Brno, Czech Republic</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Bailey, C. Donovan</mods:namePart>
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<mods:nameIdentifier type="ORCID">https://orcid.org/0000-0002-3123-4083</mods:nameIdentifier>
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<mods:affiliation>Department of Biology, New Mexico State University, P. O. Box 30001 MSC 3 AF, Las Cruces, NM 88003, USA</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Mummenhoff, Klaus</mods:namePart>
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<mods:nameIdentifier type="ORCID">https://orcid.org/0000-0002-8449-1593</mods:nameIdentifier>
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<mods:affiliation>Department of Biology, Botany, University of Osnabrueck, Barbarastrasse 11, 49076 Osnabrueck, Germany</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Al-Shehbaz, Ihsan A.</mods:namePart>
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<mods:nameIdentifier type="ORCID">https://orcid.org/0000-0003-1822-4005</mods:nameIdentifier>
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<mods:affiliation>Missouri Botanical Garden, 4344 Shaw Boulevard, St. Louis, Missouri 63110, USA</mods:affiliation>
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<mods:nameIdentifier type="email">ihsan.al-shehbaz@mobot.org</mods:nameIdentifier>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:relatedItem type="host">
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<mods:titleInfo>
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<mods:title>PhytoKeys</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2023</mods:date>
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<mods:detail type="pubDate">
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<mods:number>2023-03-06</mods:number>
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</mods:detail>
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<mods:detail type="volume">
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<mods:number>220</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>127</mods:start>
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<mods:end>144</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:location>
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<mods:url>http://dx.doi.org/10.3897/phytokeys.220.97724</mods:url>
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</mods:location>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">http://dx.doi.org/10.3897/phytokeys.220.97724</mods:identifier>
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<mods:identifier type="Pensoft-Pub">1314-2003-220-127</mods:identifier>
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<mods:identifier type="Pensoft-UUID">2269778DD30E576DA74427AD6718FFA8</mods:identifier>
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</mods:mods>
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<treatment LSID="urn:lsid:plazi:treatment:ECC2384AA4A356018AA44291A0E9B181" httpUri="http://treatment.plazi.org/id/ECC2384AA4A356018AA44291A0E9B181" lastPageNumber="127" pageId="0" pageNumber="127">
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<subSubSection pageId="0" pageNumber="127" type="nomenclature">
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<paragraph pageId="0" pageNumber="127">
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<taxonomicName LSID="ECC2384A-A4A3-5601-8AA4-4291A0E9B181" authority="Sond. in Abh. Naturwiss. Verein Hamburg 1: 267. 1846. (1: 1)" authorityName="Sond. in Abh. Naturwiss. Verein Hamburg 1: 267. 1846. (1: 1)" family="Brassicaceae" higherTaxonomySource="treatment-meta" kingdom="Plantae" lsidName="" order="Brassicales" pageId="0" pageNumber="127" rank="tribe" tribe="Chamireae">Chamireae Sond. in Abh. Naturwiss. Verein Hamburg 1: 267. 1846. (1: 1)</taxonomicName>
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="127" type="materials_examined">
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<paragraph pageId="0" pageNumber="127">
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<typeStatus>Type</typeStatus>
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.
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</paragraph>
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<paragraph pageId="0" pageNumber="127">
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<taxonomicName authorityName="Thunberg" authorityYear="1782" class="Magnoliopsida" family="Brassicaceae" genus="Chamira" kingdom="Plantae" lsidName="Chamira" order="Brassicales" pageId="0" pageNumber="127" phylum="Tracheophyta" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="127">Chamira</emphasis>
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</taxonomicName>
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Thunb.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="127" type="description">
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<paragraph pageId="0" pageNumber="127">Description.</paragraph>
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<paragraph pageId="0" pageNumber="127">
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Herbs, annual.
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<taxonomicName authorityName="Thunberg" authorityYear="1782" class="Magnoliopsida" family="Brassicaceae" kingdom="Plantae" lsidName="" order="Brassicales" pageId="0" pageNumber="127" phylum="Tracheophyta" rank="tribe" tribe="Trichomes">Trichomes</taxonomicName>
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absent. Leaves sessile or short petiolate, not auriculate at base, lowest pair opposite, representing persistent cotyledons and main photosynthetic part of plant, to 25 cm wide, cauline leaves alternate, much smaller, sometimes fail to develop. Racemes ebracteate, elongated in fruit. Sepals connivent, dimorphic, median (outer) pair not saccate at base, lateral pair with a distinct spur 1-2.5 mm long; petals white, with well-differentiated claw; filaments unappendaged; pollen 3-colpate; ovules 2-8 per ovary. Fruits siliques, dehiscent, terete to sublatiseptate, unsegmented; styles distinct; stigma entire. Seeds uniseriate; cotyledons longitudinally folded and margins deeply folded within.
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<emphasis italics="true" pageId="0" pageNumber="127">x</emphasis>
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= 19.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="127" type="distribution">
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<paragraph pageId="0" pageNumber="127">Distribution.</paragraph>
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<paragraph pageId="0" pageNumber="127">
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<taxonomicName class="Magnoliopsida" family="Brassicaceae" genus="Chamira" kingdom="Plantae" lsidName="Chamira circaeoides" order="Brassicales" pageId="0" pageNumber="127" phylum="Tracheophyta" rank="species" species="circaeoides">
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<emphasis italics="true" pageId="0" pageNumber="127">Chamira circaeoides</emphasis>
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</taxonomicName>
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(L. f.) Zahlbr. is endemic to the Western Cape of South Africa.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="127" type="3d. dipoma and hemilophia">
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<paragraph pageId="0" pageNumber="127">
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3d.
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<taxonomicName class="Magnoliopsida" family="Brassicaceae" genus="Dipoma" kingdom="Plantae" lsidName="Dipoma" order="Brassicales" pageId="0" pageNumber="127" phylum="Tracheophyta" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="127">Dipoma</emphasis>
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</taxonomicName>
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and
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<taxonomicName class="Magnoliopsida" family="Brassicaceae" genus="Hemilophia" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Hemilophia" order="Brassicales" pageId="0" pageNumber="127" phylum="Tracheophyta" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="127">Hemilophia</emphasis>
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</taxonomicName>
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</paragraph>
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<paragraph pageId="0" pageNumber="127">
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<taxonomicName class="Magnoliopsida" family="Brassicaceae" genus="Dipoma" kingdom="Plantae" lsidName="Dipoma" order="Brassicales" pageId="0" pageNumber="127" phylum="Tracheophyta" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="127">Dipoma</emphasis>
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</taxonomicName>
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Franch. was first studied by
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<bibRefCitation DOI="https://doi.org/10.1007/s00606-010-0271-8" author="Warwick, SI" journalOrPublisher="Plant Systematics and Evolution" pageId="0" pageNumber="127" pagination="209 - 232" refId="B40" refString="Warwick, SI, Mummenhoff, K, Sauder, CA, Koch, MA, Al-Shehbaz, IA, 2010. Closing the gaps: Phylogenetic relationships in the Brassicaceae based on DNA sequence data of nuclear ribosomal ITS region. Plant Systematics and Evolution 285 (3-4): 209 - 232, DOI: https://doi.org/10.1007/s00606-010-0271-8" title="Closing the gaps: Phylogenetic relationships in the Brassicaceae based on DNA sequence data of nuclear ribosomal ITS region." url="https://doi.org/10.1007/s00606-010-0271-8" volume="285" year="2010">Warwick et al. (2010)</bibRefCitation>
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who did not assign it to any tribe, and together with
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<taxonomicName class="Magnoliopsida" family="Brassicaceae" genus="Hemilophia" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Hemilophia" order="Brassicales" pageId="0" pageNumber="127" phylum="Tracheophyta" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="127">Hemilophia</emphasis>
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</taxonomicName>
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Franch., they were listed as unplaced in
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<bibRefCitation DOI="https://doi.org/10.1002/tax.615002" author="Al-Shehbaz, IA" journalOrPublisher="Taxon" pageId="0" pageNumber="127" pagination="931 - 954" refId="B1" refString="Al-Shehbaz, IA, 2012. A generic and tribal synopsis of the Brassicaceae (Cruciferae). Taxon 61 (5): 931 - 954, DOI: https://doi.org/10.1002/tax.615002" title="A generic and tribal synopsis of the Brassicaceae (Cruciferae)." url="https://doi.org/10.1002/tax.615002" volume="61" year="2012">Al-Shehbaz (2012)</bibRefCitation>
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.
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<bibRefCitation DOI="https://doi.org/10.1111/nph.15732" author="Nikolov, LA" journalOrPublisher="The New Phytologist" pageId="0" pageNumber="127" pagination="1638 - 1651" refId="B32" refString="Nikolov, LA, Shushkov, P, Nevado, B, Gan, XC, Al-Shehbaz, IA, Filatov, D, Bailey, CD, Tsiantis, M, 2019. Resolving the backbone of the Brassicaceae phylogeny for investigating trait diversity. The New Phytologist 222 (3): 1638 - 1651, DOI: https://doi.org/10.1111/nph.15732" title="Resolving the backbone of the Brassicaceae phylogeny for investigating trait diversity." url="https://doi.org/10.1111/nph.15732" volume="222" year="2019">Nikolov et al. (2019)</bibRefCitation>
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showed the two genera form a monophyletic clade unrelated to any tribe and suggested their placement in a new tribe. However, plastome data by
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<bibRefCitation DOI="https://doi.org/10.1038/s41467-020-17605-7" author="Walden, N" journalOrPublisher="Nature Communications" pageId="0" pageNumber="127" pagination=": 3795" refId="B39" refString="Walden, N, German, DA, Wolf, EM, Kiefer, M, Rigault, P, Huang, XC, Kiefer, C, Schmickl, R, Franzke, A, Neuffer, B, Mummenhoff, K, Koch, MA, 2020. Nested whole-genome duplications coincide with diversification and high morphological disparity in Brassicaceae. Nature Communications 11 (1): 3795, DOI: https://doi.org/10.1038/s41467-020-17605-7" title="Nested whole-genome duplications coincide with diversification and high morphological disparity in Brassicaceae." url="https://doi.org/10.1038/s41467-020-17605-7" volume="11" year="2020">Walden et al. (2020)</bibRefCitation>
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showed
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<taxonomicName class="Magnoliopsida" family="Brassicaceae" genus="Dipoma" kingdom="Plantae" lsidName="Dipoma" order="Brassicales" pageId="0" pageNumber="127" phylum="Tracheophyta" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="127">Dipoma</emphasis>
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</taxonomicName>
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to be affiliated with the
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<taxonomicName class="Magnoliopsida" family="Brassicaceae" kingdom="Plantae" lsidName="" order="Brassicales" pageId="0" pageNumber="127" phylum="Tracheophyta" rank="tribe" tribe="Crucihimalayeae">Crucihimalayeae</taxonomicName>
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and not with
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<taxonomicName class="Magnoliopsida" family="Brassicaceae" genus="Hemilophia" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Hemilophia" order="Brassicales" pageId="0" pageNumber="127" phylum="Tracheophyta" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="127">Hemilophia</emphasis>
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</taxonomicName>
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. The results from the nuclear genome of
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<bibRefCitation DOI="https://doi.org/10.1101/2022.09.01.506188" author="Hendriks, KP" journalOrPublisher="1). [Edinburgh] University Press, Edinburgh" pageId="0" pageNumber="127" refId="B20" refString="Hendriks, KP, Kiefer, C, Al-Shehbaz, IA, Bailey, CD, Hooft van Huysduynen, A, Nikolov, LA, Nauheimer, L, Zuntini, AR, German, DA, Franzke, A, Koch, MA, Lysak, MA, Toro-Nunez, O, Oezuedogru, B, Invernon, VR, Walden, N, Maurin, O, Hay, NM, Shushkov, P, Mandakova, T, Thulin, M, Windham, MD, Resetnik, I, Spaniel, S, Ly, E, Pires, JC, Harkess, A, Neuffer, B, Vogt, R, Braeuchler, C, Rainer, H, Janssens, SB, Schmull, M, Forrest, A, Guggisberg, A, Zmarzty, S, Lepschi, BJ, Scarlett, N, Stauffer, FW, Schoenberger, I, Heenan, P, Baker, WJ, Forest, F, Mummenhoff, K, Lens, F, 2022. Less is more: global Brassicaceae phylogeny based on filtering of 1,000 gene dataset. BioRxiv, 1-44. https://doi.org/10.1101/2022.09.01.506188" title="Less is more: global Brassicaceae phylogeny based on filtering of 1,000 gene dataset. BioRxiv, 1 - 44." url="https://doi.org/10.1101/2022.09.01.506188" year="2022">Hendriks et al. (2022)</bibRefCitation>
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fully agree with those of
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<bibRefCitation DOI="https://doi.org/10.1111/nph.15732" author="Nikolov, LA" journalOrPublisher="The New Phytologist" pageId="0" pageNumber="127" pagination="1638 - 1651" refId="B32" refString="Nikolov, LA, Shushkov, P, Nevado, B, Gan, XC, Al-Shehbaz, IA, Filatov, D, Bailey, CD, Tsiantis, M, 2019. Resolving the backbone of the Brassicaceae phylogeny for investigating trait diversity. The New Phytologist 222 (3): 1638 - 1651, DOI: https://doi.org/10.1111/nph.15732" title="Resolving the backbone of the Brassicaceae phylogeny for investigating trait diversity." url="https://doi.org/10.1111/nph.15732" volume="222" year="2019">Nikolov et al. (2019)</bibRefCitation>
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, and the new tribe
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<taxonomicName family="Brassicaceae" kingdom="Plantae" lsidName="" order="Brassicales" pageId="0" pageNumber="127" rank="tribe" tribe="Hemilophieae">Hemilophieae</taxonomicName>
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is proposed here to accommodate both genera, leaving incongruent chloroplast and nuclear-based phylogenies.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |