treatments-xml/data/74/43/87/744387D5B11EA13FEBADF859E33BFEE0.xml
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<mods:title id="966244B1A35FDDBB221F609D86C21EB1">A phylogenetic analysis of the southern African gecko genus Afroedura Loveridge (Squamata: Gekkonidae), with the description of nine new species from Limpopo and Mpumalanga provinces of South Africa</mods:title>
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<mods:namePart id="5D9D62241B87ADCE1A76AD970ECE7F30">Jacobsen, Niels H. G.</mods:namePart>
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<mods:namePart id="6B71E63D02C99A8DB9B6FB97E23A161A">Kuhn, Arianna L.</mods:namePart>
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<mods:namePart id="F46BEF4390E4864BBE91B12F9B362565">Jackman, Todd R.</mods:namePart>
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<mods:namePart id="B2B2C25824EB75CAE8180CB55DFB898D">Bauer, Aaron M.</mods:namePart>
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<treatment id="744387D5B11EA13FEBADF859E33BFEE0" ID-DOI="http://doi.org/10.5281/zenodo.5620539" ID-GBIF-Taxon="119514200" ID-Zenodo-Dep="5620539" LSID="urn:lsid:plazi:treatment:744387D5B11EA13FEBADF859E33BFEE0" httpUri="http://treatment.plazi.org/id/744387D5B11EA13FEBADF859E33BFEE0" lastPageId="19" lastPageNumber="470" pageId="18" pageNumber="469">
<subSubSection id="B4F06548B11EA13EEBADF859E26BF826" box="[151,513,1928,1955]" pageId="18" pageNumber="469" type="nomenclature">
<paragraph id="FC5536C3B11EA13EEBADF859E26BF826" blockId="18.[151,513,1928,1955]" box="[151,513,1928,1955]" pageId="18" pageNumber="469">
<heading id="A71D81AFB11EA13EEBADF859E26BF826" bold="true" box="[151,513,1928,1955]" fontSize="11" level="1" pageId="18" pageNumber="469" reason="1">
<taxonomicName id="3BEA4D40B11EA13EEBADF859E26BF826" authority="Boulenger, 1888" authorityName="Boulenger" authorityYear="1888" box="[151,513,1928,1955]" class="Reptilia" family="Gekkonidae" genus="Afroedura" kingdom="Animalia" order="Squamata" pageId="18" pageNumber="469" phylum="Chordata" rank="species" species="africana">
<emphasis id="CE9EEAD1B11EA13EEBADF859E26BF826" bold="true" box="[151,513,1928,1955]" pageId="18" pageNumber="469">
<emphasis id="CE9EEAD1B11EA13EEBADF859E14AF827" bold="true" box="[151,288,1928,1954]" italics="true" pageId="18" pageNumber="469">A. africana</emphasis>
(
<bibRefCitation id="987B4B32B11EA13EEA14F858E193F826" author="Boulenger" box="[302,505,1929,1955]" pageId="18" pageNumber="469" refString="Boulenger, G. A. (1888) On new or little-known South-African reptiles. Annals and Magazine of Natural History, series 6, 2, 136 - 141. http: // dx. doi. org / 10.1080 / 00222938809460892" type="journal article" year="1888">Boulenger, 1888</bibRefCitation>
)
</emphasis>
</taxonomicName>
</heading>
</paragraph>
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<subSubSection id="B4F06548B11EA13EEBADF81EE56DF86D" box="[151,1287,1999,2024]" pageId="18" pageNumber="469" type="distribution">
<paragraph id="FC5536C3B11EA13EEBADF81EE56DF86D" blockId="18.[151,1287,1999,2024]" box="[151,1287,1999,2024]" pageId="18" pageNumber="469">
<emphasis id="CE9EEAD1B11EA13EEBADF81EE15AF86D" bold="true" box="[151,304,1999,2024]" pageId="18" pageNumber="469">Distribution.</emphasis>
Erongo Region, west central
<collectingCountry id="84FD7653B11EA13EE947F81EE2B7F86D" box="[637,733,1999,2024]" name="Namibia" pageId="18" pageNumber="469">Namibia</collectingCountry>
(
<bibRefCitation id="987B4B32B11EA13EE9D6F801E469F86D" author="Mouton" box="[748,1027,1999,2024]" pageId="18" pageNumber="469" refString="Mouton, P. le F. N. &amp; Mostert, D. P. (1985) Description of a new species of Afroedura (Loveridge) (Reptilia: Gekkonidae) from the south - western Cape. South African Journal of Zoology, 20, 246 - 249." type="journal article" year="1985">Mouton &amp; Mostert 1985</bibRefCitation>
;
<bibRefCitation id="987B4B32B11EA13EEF35F81EE4F7F86D" author="Griffin" box="[1039,1181,1999,2024]" pageId="18" pageNumber="469" refString="Griffin, M. (2003) Annotated Checklist and Provisional National Conservation Status of Namibian Reptiles. Namibia Scientific Society, Windhoek, [ii] + 169 pp." type="book" year="2003">Griffin 2003</bibRefCitation>
) (
<figureCitation id="64D12A46B11EA13EEF8EF81EE493F86D" box="[1204,1273,1999,2024]" captionStart="FIGURE 4" captionStartId="18.[151,250,1165,1187]" captionTargetBox="[181,1379,205,1164]" captionTargetId="figure@18.[172,1393,177,1165]" captionTargetPageId="18" captionText="FIGURE 4. Map of southern Africa showing the approximate distributional ranges of previously described species of Afroedura. Red dots represent localities sampled for the genetic portion of the study. Ranges based on Branch (1998) and Bates et al. (2014) as well as unpublished data. Taxon names follow the conclusions of this paper. Area demarcated by a dashed line is presented in more detail in Figure 6." httpUri="https://zenodo.org/record/250499/files/figure.png" pageId="18" pageNumber="469">Fig. 4</figureCitation>
).
</paragraph>
</subSubSection>
<subSubSection id="B4F06548B11FA13FEBFDFF46E33BFEE0" pageId="19" pageNumber="470" type="discussion">
<paragraph id="FC5536C3B11FA13FEBFDFF46E33BFEE0" blockId="19.[151,1436,151,357]" pageId="19" pageNumber="470">
<emphasis id="CE9EEAD1B11FA13FEBFDFF46E151FF35" bold="true" box="[199,315,151,176]" pageId="19" pageNumber="470">Remarks.</emphasis>
Since the work of
<bibRefCitation id="987B4B32B11FA13FE92BFF46E2DDFF35" author="Haacke" box="[529,695,151,176]" pageId="19" pageNumber="470" refString="Haacke, W. D. (1965) Additional notes on the Herpetology of South West Africa with descriptions of two new subspecies of geckos. Cimbebasia, 11, 1 - 40." type="journal article" year="1965">Haacke (1965)</bibRefCitation>
<taxonomicName id="3BEA4D40B11FA13FE984FF49E357FF35" box="[702,829,152,176]" class="Reptilia" family="Gekkonidae" genus="Afroedura" kingdom="Animalia" order="Squamata" pageId="19" pageNumber="470" phylum="Chordata" rank="species" species="africana">
<emphasis id="CE9EEAD1B11FA13FE984FF49E357FF35" box="[702,829,152,176]" italics="true" pageId="19" pageNumber="470">A. africana</emphasis>
</taxonomicName>
has been considered a polytypic species (e.g., Branch
<emphasis id="CE9EEAD1B11FA13FEBADFF6CE0A4FF50" box="[151,206,188,213]" italics="true" pageId="19" pageNumber="470">et al</emphasis>
. 1988;
<bibRefCitation id="987B4B32B11FA13FEA15FF6DE1ABFF51" author="Rosler" box="[303,449,188,213]" pageId="19" pageNumber="470" refString="Rosler, H. (2000) Kommentierte Liste der rezent, subrezent und fossil bekannten Geckotaxa (Reptilia: Gekkonomorpha). Gekkota, 2, 28 - 153." type="journal article" year="2000">Rösler 2000</bibRefCitation>
;
<bibRefCitation id="987B4B32B11FA13FEAE8FF6DE235FF51" author="Kluge" box="[466,607,188,213]" pageId="19" pageNumber="470" refString="Kluge, A. G. (2001) Gekkotan lizard taxonomy. Hamadryad, 26, 1 - 209." type="journal article" year="2001">Kluge 2001</bibRefCitation>
;
<bibRefCitation id="987B4B32B11FA13FE94AFF6DE362FF51" author="Griffin" box="[624,776,188,213]" pageId="19" pageNumber="470" refString="Griffin, M. (2003) Annotated Checklist and Provisional National Conservation Status of Namibian Reptiles. Namibia Scientific Society, Windhoek, [ii] + 169 pp." type="book" year="2003">Griffin 2003</bibRefCitation>
). We here consider
<taxonomicName id="3BEA4D40B11FA13FE8C6FF6DE4EAFF51" box="[1020,1152,188,212]" class="Reptilia" family="Gekkonidae" genus="Afroedura" kingdom="Animalia" order="Squamata" pageId="19" pageNumber="470" phylum="Chordata" rank="species" species="africana">
<emphasis id="CE9EEAD1B11FA13FE8C6FF6DE4EAFF51" box="[1020,1152,188,212]" italics="true" pageId="19" pageNumber="470">A. africana</emphasis>
</taxonomicName>
as a monotypic central Namibian endemic (see below). All three of our genetic samples originate from the Erongo Region of central
<collectingCountry id="84FD7653B11FA13FEBADFED5E092FE98" box="[151,248,260,285]" name="Namibia" pageId="19" pageNumber="470">Namibia</collectingCountry>
and are thus presumably referable to
<emphasis id="CE9EEAD1B11FA13FE99EFED5E3DDFE99" box="[676,951,260,284]" italics="true" pageId="19" pageNumber="470">
<taxonomicName id="3BEA4D40B11FA13FE99EFED5E302FE99" box="[676,872,260,284]" class="Reptilia" family="Gekkonidae" genus="Afroedura" kingdom="Animalia" order="Squamata" pageId="19" pageNumber="470" phylum="Chordata" rank="subSpecies" species="africana" subSpecies="sensu">
A. africana
<taxonomicNameLabel id="D5AD57AAB11FA13FE810FED4E302FE99" box="[810,872,261,284]" pageId="19" pageNumber="470" sensu="stricto">sensu</taxonomicNameLabel>
</taxonomicName>
stricto
</emphasis>
. However, the levels of divergence among these samples (up to 19.34%) are comparable to or greater than interspecific differences elsewhere in the genus (
<figureCitation id="64D12A46B11FA13FEBA5FE9DE08BFEE1" box="[159,225,332,357]" captionStart="FIGURE 1" captionStartId="14.[151,250,1708,1730]" captionTargetBox="[161,1431,490,1674]" captionTargetId="figure@14.[147,1432,481,1677]" captionTargetPageId="14" captionText="FIGURE 1. Maximum likelihood phylogram of Afroedura relationships derived from two genes (ND 2, RAG 1). Support values are presented as maximum likelihood bootstraps (MLBS) / Bayesian posterior probabilities (BPP) / parsimony bootstraps (PBS). Only most closely related outgroup taxa are shown. Images (top to bottom) of representative Afroedura species groups: A. hawequensis, A. pondolia, A. karroica, A. loveridgei, A. haackei, A. marleyi, A. granitica sp. nov." httpUri="https://zenodo.org/record/250496/files/figure.png" pageId="19" pageNumber="470">Fig. 1</figureCitation>
), suggesting that further study of this taxon is required.
</paragraph>
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