273 lines
20 KiB
XML
273 lines
20 KiB
XML
<document ID-DOI="http://dx.doi.org/10.3897/mycokeys.87.76085" ID-GBIF-Dataset="ac841941-ab0d-438b-ad40-26bd8e43e5f3" ID-PMC="PMC8873192" ID-Pensoft-Pub="1314-4049-87-133" ID-Pensoft-UUID="3E84DC4D23DD55D1BD51C48DF991EADD" ID-PubMed="35221753" ModsDocID="1314-4049-87-133" checkinTime="1645139634519" checkinUser="pensoft" docAuthor="Zhang, Guang-Zhi, Yang, He-Tong, Zhang, Xin-Jian, Zhou, Fang-Yuan, Wu, Xiao-Qing, Xie, Xue-Ying, Zhao, Xiao-Yan & Zhou, Hong-Zi" docDate="2022" docId="51ECA4846FB65DD388CFFFE20CD94506" docLanguage="en" docName="MycoKeys 87: 133-157" docOrigin="MycoKeys 87" docPubDate="2022-02-17" docSource="http://dx.doi.org/10.3897/mycokeys.87.76085" docTitle="Trichoderma shangrilaense G. Z. Zhang 2022, sp. nov." docType="treatment" docVersion="4" id="3E84DC4D23DD55D1BD51C48DF991EADD" lastPageNumber="133" masterDocId="3E84DC4D23DD55D1BD51C48DF991EADD" masterDocTitle="Five new species of Trichoderma from moist soils in China" masterLastPageNumber="157" masterPageNumber="133" pageNumber="133" updateTime="1668136798648" updateUser="ExternalLinkService">
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<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo>
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<mods:title>Five new species of Trichoderma from moist soils in China</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Zhang, Guang-Zhi</mods:namePart>
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<mods:affiliation>Qilu University of Technology (Shandong Academy of Sciences), Ecology Institute, Shandong Provincial Key Laboratory for Applied Microbiology, Jinan 250103, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Yang, He-Tong</mods:namePart>
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<mods:affiliation>Qilu University of Technology (Shandong Academy of Sciences), Ecology Institute, Shandong Provincial Key Laboratory for Applied Microbiology, Jinan 250103, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Zhang, Xin-Jian</mods:namePart>
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<mods:affiliation>Qilu University of Technology (Shandong Academy of Sciences), Ecology Institute, Shandong Provincial Key Laboratory for Applied Microbiology, Jinan 250103, China</mods:affiliation>
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<mods:nameIdentifier type="email">zhangxj@sdas.org</mods:nameIdentifier>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Zhou, Fang-Yuan</mods:namePart>
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<mods:affiliation>Qilu University of Technology (Shandong Academy of Sciences), Ecology Institute, Shandong Provincial Key Laboratory for Applied Microbiology, Jinan 250103, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Wu, Xiao-Qing</mods:namePart>
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<mods:affiliation>Qilu University of Technology (Shandong Academy of Sciences), Ecology Institute, Shandong Provincial Key Laboratory for Applied Microbiology, Jinan 250103, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Xie, Xue-Ying</mods:namePart>
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<mods:affiliation>Qilu University of Technology (Shandong Academy of Sciences), Ecology Institute, Shandong Provincial Key Laboratory for Applied Microbiology, Jinan 250103, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Zhao, Xiao-Yan</mods:namePart>
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<mods:affiliation>Qilu University of Technology (Shandong Academy of Sciences), Ecology Institute, Shandong Provincial Key Laboratory for Applied Microbiology, Jinan 250103, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Zhou, Hong-Zi</mods:namePart>
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<mods:affiliation>Qilu University of Technology (Shandong Academy of Sciences), Ecology Institute, Shandong Provincial Key Laboratory for Applied Microbiology, Jinan 250103, China</mods:affiliation>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:titleInfo>
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<mods:title>MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2022</mods:date>
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<mods:detail type="pubDate">
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<mods:number>2022-02-17</mods:number>
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</mods:detail>
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<mods:detail type="volume">
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<mods:number>87</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>133</mods:start>
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<mods:end>157</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:location>
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<mods:url>http://dx.doi.org/10.3897/mycokeys.87.76085</mods:url>
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</mods:location>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">http://dx.doi.org/10.3897/mycokeys.87.76085</mods:identifier>
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<mods:identifier type="Pensoft-Pub">1314-4049-87-133</mods:identifier>
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<mods:identifier type="Pensoft-UUID">3E84DC4D23DD55D1BD51C48DF991EADD</mods:identifier>
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</mods:mods>
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<treatment ID-GBIF-Taxon="193397164" LSID="urn:lsid:plazi:treatment:51ECA4846FB65DD388CFFFE20CD94506" httpUri="http://treatment.plazi.org/id/51ECA4846FB65DD388CFFFE20CD94506" lastPageNumber="133" pageId="0" pageNumber="133">
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<subSubSection pageId="0" pageNumber="133" type="nomenclature">
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||
<paragraph pageId="0" pageNumber="133">
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<taxonomicName LSID="51ECA484-6FB6-5DD3-88CF-FFE20CD94506" authority="G. Z. Zhang" authorityName="G. Z. Zhang" authorityYear="2022" class="Sordariomycetes" family="Hypocreaceae" genus="Trichoderma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Trichoderma shangrilaense" order="Hypocreales" pageId="0" pageNumber="133" phylum="Ascomycota" rank="species" species="shangrilaense" status="sp. nov.">Trichoderma shangrilaense G.Z. Zhang</taxonomicName>
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<taxonomicNameLabel pageId="0" pageNumber="133">sp. nov.</taxonomicNameLabel>
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="133" type="description">
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<paragraph pageId="0" pageNumber="133">
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<figureCitation captionStart="Figure 6" captionStartId="F6" captionText="Figure 6. Trichoderma shangrilaense A-D cultures (A on PDA, 25 ° C, 10 days B on PDA, 25 ° C, 21 days C on MEA, 25 ° C, 21 days D on CMD, 25 ° C, 21 days) E-G, I-K conidiophores and phialides H conidia A-K from WT 34004. Scale bars: 10 μm (E-K)." figureDoi="10.3897/mycokeys.87.76085.figure6" httpUri="https://binary.pensoft.net/fig/647559" pageId="0" pageNumber="133">Fig. 6</figureCitation>
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="133" type="etymology">
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<paragraph pageId="0" pageNumber="133">Etymology.</paragraph>
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<paragraph pageId="0" pageNumber="133">
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"
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<taxonomicName authorityName="G. Z. Zhang" authorityYear="2022" class="Sordariomycetes" family="Hypocreaceae" genus="Trichoderma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Trichoderma shangrilaense" order="Hypocreales" pageId="0" pageNumber="133" phylum="Ascomycota" rank="species" species="shangrilaense">
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<emphasis italics="true" pageId="0" pageNumber="133">Trichoderma shangrilaense</emphasis>
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</taxonomicName>
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" was originally found at Shangrila in Yunnan Province of China.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="133" type="typification">
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<paragraph pageId="0" pageNumber="133">Typification.</paragraph>
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<paragraph pageId="0" pageNumber="133">China. Yunnan, Pudacuo National Park, 3611 m (altitude), isolated from soil, 21 June 2016, G.Z. Zhang (Holotype WT 34004), Ex-type culture ACCC 39714.</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="133" type="diagnosis">
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<paragraph pageId="0" pageNumber="133">Diagnosis.</paragraph>
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<paragraph pageId="0" pageNumber="133">
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Phylogenetically,
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<taxonomicName authorityName="G. Z. Zhang" authorityYear="2022" class="Sordariomycetes" family="Hypocreaceae" genus="Trichoderma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Trichoderma shangrilaense" order="Hypocreales" pageId="0" pageNumber="133" phylum="Ascomycota" rank="species" species="shangrilaense">
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<emphasis italics="true" pageId="0" pageNumber="133">Trichoderma shangrilaense</emphasis>
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</taxonomicName>
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is related to
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<taxonomicName lsidName="T. parapiluliferum" pageId="0" pageNumber="133" rank="species" species="parapiluliferum">
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<emphasis italics="true" pageId="0" pageNumber="133">T. parapiluliferum</emphasis>
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</taxonomicName>
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(CBS 120921) (Fig.
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<figureCitation captionStart="Figure 1" captionStartId="F1" captionText="Figure 1. Phylogenetic tree, based on the Maximum Likelihood analysis of the rpb 2 (left; InL = - 5930.92) and tef 1 - α (right; InL = - 7681.95) dataset. Bootstrap values of Maximum Likelihood (left) and Maximum Parsimony (right) above 50 % are indicated at the nodes. The tree is rooted with Protocrea illinoensis TFC 9698 and P. farinose CPK 3144. New species proposed here are indicated in bold. The type strains are indicated with an asterisk (*) after the strain number. Results of the pairwise sequence similarity are illustrated on the dashed lines between the query strain and its closely-related species (arrows point to the reference strains)." figureDoi="10.3897/mycokeys.87.76085.figure1" httpUri="https://binary.pensoft.net/fig/647554" pageId="0" pageNumber="133">1</figureCitation>
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), but the sequence similarity of
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<emphasis italics="true" pageId="0" pageNumber="133">rpb2</emphasis>
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between these two species was 98.93% and the sequence similarity of
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<emphasis italics="true" pageId="0" pageNumber="133">tef1</emphasis>
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-α was 96.35%. That does not meet the
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<emphasis italics="true" pageId="0" pageNumber="133">sp</emphasis>
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∃!(
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<emphasis italics="true" pageId="0" pageNumber="133">rpb2</emphasis>
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99≅
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<emphasis italics="true" pageId="0" pageNumber="133">tef1</emphasis>
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97) standard for
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<taxonomicName lsidName="T. parapiluliferum" pageId="0" pageNumber="133" rank="species" species="parapiluliferum">
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<emphasis italics="true" pageId="0" pageNumber="133">T. parapiluliferum</emphasis>
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</taxonomicName>
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or other known
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<taxonomicName class="Sordariomycetes" family="Hypocreaceae" genus="Trichoderma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Trichoderma" order="Hypocreales" pageId="0" pageNumber="133" phylum="Ascomycota" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="133">Trichoderma</emphasis>
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</taxonomicName>
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species. Conidiophore main axis of
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<taxonomicName lsidName="T. shangrilaense" pageId="0" pageNumber="133" rank="species" species="shangrilaense">
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<emphasis italics="true" pageId="0" pageNumber="133">T. shangrilaense</emphasis>
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</taxonomicName>
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fertile to apex, conidia obovoid to ellipsoid, easily distinguished from that of
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<taxonomicName lsidName="T. parapiluliferum" pageId="0" pageNumber="133" rank="species" species="parapiluliferum">
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<emphasis italics="true" pageId="0" pageNumber="133">T. parapiluliferum</emphasis>
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</taxonomicName>
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.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="133" type="teleomorph">
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<paragraph pageId="0" pageNumber="133">Teleomorph.</paragraph>
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<paragraph pageId="0" pageNumber="133">Unknown.</paragraph>
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<paragraph pageId="0" pageNumber="133">
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Growth optimal at 20 °C, slow, limited at 25 °C and absent at 30 °C or 35 °C. Colony radius after 72 h at 20 °C 19-21 mm on PDA, 23-24 mm on CMD, 19-21 mm on MEA and 8-11 mm on SNA. Aerial mycelia abundant, compact on PDA after 7 days at 20 °C under 12 h photoperiod, conidiation not easily formed and a yellow diffusing pigment developed near the inoculation point; conidiation formed unequal in size, white pustules after 14 days. Conidiophores and branches narrow and flexuous, forming a dendriform structure and irregularly branched, not rebranched, main axis to 4.3-5.0
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<normalizedToken originalValue="µm">µm</normalizedToken>
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wide, fertile to apex. Phialides, flask-shaped, often curved, (4.5-)5.7-9.0(-11.1)
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<normalizedToken originalValue="×">x</normalizedToken>
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(2.9-)3.2-3.5(-4.1)
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<normalizedToken originalValue="μm">μm</normalizedToken>
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(mean = 7.4
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<normalizedToken originalValue="×">x</normalizedToken>
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3.4
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<normalizedToken originalValue="μm">μm</normalizedToken>
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), 1.6-3.4
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<normalizedToken originalValue="μm">μm</normalizedToken>
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wide (mean = 2.6
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<normalizedToken originalValue="μm">μm</normalizedToken>
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) near the base; phialide length/width ratio (1.5-)2.0-2.6(-3.0) (mean = 2.3). Conidia, obovoid to ellipsoidal, smooth, (3.3-)3.5-4.0(-4.4)
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<normalizedToken originalValue="×">x</normalizedToken>
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(2.8-)3.0-3.3(-3.5)
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<normalizedToken originalValue="μm">μm</normalizedToken>
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(mean = 3.8
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<normalizedToken originalValue="×">x</normalizedToken>
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3.19
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<normalizedToken originalValue="μm">μm</normalizedToken>
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), length/width ratio 1.1-1.4 (mean = 1.2). Chlamydospores not observed.
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</paragraph>
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<caption doi="10.3897/mycokeys.87.76085.figure6" httpUri="https://binary.pensoft.net/fig/647559" pageId="0" pageNumber="133" start="Figure 6" startId="F6">
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<paragraph pageId="0" pageNumber="133">
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<emphasis bold="true" pageId="0" pageNumber="133">Figure 6.</emphasis>
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<taxonomicName authorityName="G. Z. Zhang" authorityYear="2022" class="Sordariomycetes" family="Hypocreaceae" genus="Trichoderma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Trichoderma shangrilaense" order="Hypocreales" pageId="0" pageNumber="133" phylum="Ascomycota" rank="species" species="shangrilaense">
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<emphasis italics="true" pageId="0" pageNumber="133">Trichoderma shangrilaense</emphasis>
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</taxonomicName>
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<emphasis bold="true" pageId="0" pageNumber="133">A-D</emphasis>
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cultures (
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<emphasis bold="true" pageId="0" pageNumber="133">A</emphasis>
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on PDA, 25 °C, 10 days
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<emphasis bold="true" pageId="0" pageNumber="133">B</emphasis>
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on PDA, 25 °C, 21 days
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<emphasis bold="true" pageId="0" pageNumber="133">C</emphasis>
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on MEA, 25 °C, 21 days
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<emphasis bold="true" pageId="0" pageNumber="133">D</emphasis>
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on CMD, 25 °C, 21 days)
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<emphasis bold="true" pageId="0" pageNumber="133">E-G, I-K</emphasis>
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conidiophores and phialides
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<emphasis bold="true" pageId="0" pageNumber="133">H</emphasis>
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conidia
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<emphasis bold="true" pageId="0" pageNumber="133">A-K</emphasis>
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from WT34004. Scale bars: 10
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<normalizedToken originalValue="μm">μm</normalizedToken>
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(
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<emphasis bold="true" pageId="0" pageNumber="133">E-K</emphasis>
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).
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</paragraph>
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</caption>
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<paragraph pageId="0" pageNumber="133">Colony radius 28-33 mm, aerial mycelia abundant and floccose after 7 days at 20 °C under 12 h photoperiod. Conidiation slowly developing on MEA. After about 14 days, pompon-like, white fascicles developed. No diffusing pigment observed. On CMD after 7 days at 20 °C under 12 h photoperiod, colony radius 28-33 mm, aerial mycelia few. Conidiation formed flat or cushion-shaped pustules near the colony margin after 21 days and a yellow diffusing pigment developed near the inoculation point. On SNA after 7 days at 20 °C under 12 h photoperiod, colony mycelia sparse and no conidiation formed. After 10 days, pustules scattered around the periphery of the colony. Diffusing pigment not developed.</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="133" type="distribution">
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<paragraph pageId="0" pageNumber="133">Distribution.</paragraph>
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<paragraph pageId="0" pageNumber="133">China. Yunnan and Sichuan.</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="133" type="additional specimen examined">
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<paragraph pageId="0" pageNumber="133">Additional specimen examined.</paragraph>
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<paragraph pageId="0" pageNumber="133">
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China. Sichuan, Huanglong Nature Reserve, 3561 m (altitude), isolated from soil, 25 September 2016,
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<emphasis italics="true" pageId="0" pageNumber="133">Z. Li</emphasis>
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(WT 34012).
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="133" type="notes">
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<paragraph pageId="0" pageNumber="133">Notes.</paragraph>
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<paragraph pageId="0" pageNumber="133">
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Phylogenetically,
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<taxonomicName authorityName="G. Z. Zhang" authorityYear="2022" class="Sordariomycetes" family="Hypocreaceae" genus="Trichoderma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Trichoderma shangrilaense" order="Hypocreales" pageId="0" pageNumber="133" phylum="Ascomycota" rank="species" species="shangrilaense">
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<emphasis italics="true" pageId="0" pageNumber="133">Trichoderma shangrilaense</emphasis>
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</taxonomicName>
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is related to
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<taxonomicName lsidName="T. parapiluliferum" pageId="0" pageNumber="133" rank="species" species="parapiluliferum">
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<emphasis italics="true" pageId="0" pageNumber="133">T. parapiluliferum</emphasis>
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</taxonomicName>
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(CBS 120921) (Fig.
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<figureCitation captionStart="Figure 1" captionStartId="F1" captionText="Figure 1. Phylogenetic tree, based on the Maximum Likelihood analysis of the rpb 2 (left; InL = - 5930.92) and tef 1 - α (right; InL = - 7681.95) dataset. Bootstrap values of Maximum Likelihood (left) and Maximum Parsimony (right) above 50 % are indicated at the nodes. The tree is rooted with Protocrea illinoensis TFC 9698 and P. farinose CPK 3144. New species proposed here are indicated in bold. The type strains are indicated with an asterisk (*) after the strain number. Results of the pairwise sequence similarity are illustrated on the dashed lines between the query strain and its closely-related species (arrows point to the reference strains)." figureDoi="10.3897/mycokeys.87.76085.figure1" httpUri="https://binary.pensoft.net/fig/647554" pageId="0" pageNumber="133">1</figureCitation>
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), but the sequence similarity of
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<emphasis italics="true" pageId="0" pageNumber="133">rpb2</emphasis>
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between these two species was 98.93% and the sequence similarity of
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<emphasis italics="true" pageId="0" pageNumber="133">tef1</emphasis>
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-α was 96.35%. The sequence similarity of
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<emphasis italics="true" pageId="0" pageNumber="133">tef1</emphasis>
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-α with the ex-type culture G.J.S. 91-60 (GenBank accession no. AY937444) was only 92%. Optimum temperature for growth of
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<taxonomicName lsidName="T. shangrilaense" pageId="0" pageNumber="133" rank="species" species="shangrilaense">
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<emphasis italics="true" pageId="0" pageNumber="133">T. shangrilaense</emphasis>
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</taxonomicName>
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was 20 °C, no growth occurred at 30 °C as in
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<taxonomicName lsidName="T. parapiluliferum" pageId="0" pageNumber="133" rank="species" species="parapiluliferum">
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<emphasis italics="true" pageId="0" pageNumber="133">T. parapiluliferum</emphasis>
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</taxonomicName>
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and conidiation structures consist of flat or cushion-shaped pustules, formed near the colony margin on MEA, SNA and CMD. Conidiophore main axis of
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<taxonomicName class="Sordariomycetes" family="Hypocreaceae" genus="Trichoderma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Trichoderma parapiluliferum" order="Hypocreales" pageId="0" pageNumber="133" phylum="Ascomycota" rank="species" species="parapiluliferum">
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<emphasis italics="true" pageId="0" pageNumber="133">Trichoderma parapiluliferum</emphasis>
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</taxonomicName>
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has conspicuous spiral sterile apical elongations, conidia ellipsoidal to oblong (
|
||
<bibRefCitation DOI="https://doi.org/10.1080/15572536.2005.11832980" author="Lu, B" journalOrPublisher="Mycologia" pageId="0" pageNumber="133" pagination="310 - 342" refId="B41" refString="Lu, B, Druzhinina, IS, Fallah, P, Chaverri, P, Gradinger, C, Kubicek, CP, Samuels, GJ, 2004. Hypocrea / Trichoderma species with pachybasium-like conidiophores: sexual morphs for T. minutisporum and T. polysporum and their newly discovered relatives. Mycologia 96 (2): 310 - 342, DOI: https://doi.org/10.1080/15572536.2005.11832980" title="Hypocrea / Trichoderma species with pachybasium-like conidiophores: sexual morphs for T. minutisporum and T. polysporum and their newly discovered relatives." url="https://doi.org/10.1080/15572536.2005.11832980" volume="96" year="2004">Lu et al. 2004</bibRefCitation>
|
||
). Conidiophore main axis of
|
||
<taxonomicName lsidName="T. shangrilaense" pageId="0" pageNumber="133" rank="species" species="shangrilaense">
|
||
<emphasis italics="true" pageId="0" pageNumber="133">T. shangrilaense</emphasis>
|
||
</taxonomicName>
|
||
fertile to apex, conidia obovoid to ellipsoid, easily distinguished from that of
|
||
<taxonomicName lsidName="T. parapiluliferum" pageId="0" pageNumber="133" rank="species" species="parapiluliferum">
|
||
<emphasis italics="true" pageId="0" pageNumber="133">T. parapiluliferum</emphasis>
|
||
</taxonomicName>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |