311 lines
34 KiB
XML
311 lines
34 KiB
XML
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<mods:title id="C8C7BB77AA6494E1718ADE5EF4C407AC">Taxonomy and phylogenetic appraisal of Leptosphaeria chatkalica sp. nov. (Leptosphaeriaceae, Pleosporales) from Uzbekistan</mods:title>
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<mods:namePart id="4AA500F8F083B7FD0BDF0C4DCEB9F60F">Lestari, Anis S.</mods:namePart>
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<mods:affiliation id="A992B8DF85217D458C81B4BEC4BB3DEB">Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand. & School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand. & Research Center for Biomaterials, Indonesian Institute of Sciences, Cibinong Science Center, Jalan Raya Bogor km. 46, Indonesia. & anislestari 1 @ gmail. com; https: // orcid. org / 0000 - 0002 - 1606 - 9884</mods:affiliation>
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<mods:nameIdentifier id="298E6B328976F26357FE04BB495DCAC0" type="email">anislestari1@gmail.com</mods:nameIdentifier>
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<mods:namePart id="7F5FCD521FB1B35F9A1ABFC572034B1A">Wanasinghe, Dhanushka N.</mods:namePart>
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<mods:affiliation id="369B0AA5EC09CD3E5EA22DF5EE4F5AFC">CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan China. & Center for Mountain Futures, Kunming Institute of Botany, Honghe County 654400, Yunnan, China. & dnadeeshan @ gmail. com; https: // orcid. org / 0000 - 0003 - 1759 - 3933</mods:affiliation>
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<mods:nameIdentifier id="9768AAB889D0B545CA47A51060F488BC" type="email">dnadeeshan@gmail.com</mods:nameIdentifier>
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<mods:namePart id="33B2646AB78F7957E5D7699416EE754B">Gafforov, Yusufjon</mods:namePart>
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<mods:affiliation id="9707575A29819AB9AECCB5BE7906BC19">Laboratory of Mycology, Institute of Botany, Academy of Sciences of the Republic of Uzbekistan, 32 Durmon Yuli Street, Tashkent 100125, Uzbekistan. & yugafforov @ yahoo. com; https: // orcid. org / 0000 - 0003 - 3076 - 4709</mods:affiliation>
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<mods:nameIdentifier id="CD0A216785221AA3834A78B813EA6DAA" type="email">yugafforov@yahoo.com</mods:nameIdentifier>
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<mods:namePart id="F3097D18C587AC1E31C71DE429876E0F">Tennakoon, Danushka S.</mods:namePart>
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<mods:nameIdentifier id="5E8E49BB9E755E3F62E861F27074EBB2" type="ORCID">0000-0003-2306-1255</mods:nameIdentifier>
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<mods:affiliation id="5637682FE3042B1A207929AA4064FE2C">Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand. & School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand. & danushkasandaruwanatm @ gmail. com; https: // orcid. org / 0000 - 0003 - 2306 - 1255</mods:affiliation>
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<mods:nameIdentifier id="7310BF3A6F217B18F32167A2E0A7D707" type="email">danushkasandaruwanatm@gmail.com</mods:nameIdentifier>
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<mods:namePart id="50141E43FE6C56ABDE17CCBF1FD01F2D">Thilini Chethana, K. W.</mods:namePart>
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<mods:nameIdentifier id="13A4734073B320B5FEEFC6C6DD7C3F00" type="ORCID">0000-0002-5816-9269</mods:nameIdentifier>
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<mods:affiliation id="4FFEA6529FCAF183EE1CED1A4B3EC3A2">Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand. & School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand. & tchethi @ yahoo. com; https: // orcid. org / 0000 - 0002 - 5816 - 9269</mods:affiliation>
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<mods:nameIdentifier id="8C4FED881977DBB176F6CAF6BB07E31F" type="email">tchethi@yahoo.com</mods:nameIdentifier>
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<mods:namePart id="7D82BB6C435C0A74883DAC46C800FDA7">Abdurazakov, Aziz</mods:namePart>
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<mods:nameIdentifier id="DDB8351E05A38ABF2258D608DCB0402B" type="ORCID">0000-0001-9236-9638</mods:nameIdentifier>
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<mods:affiliation id="726DA998AF1212E3690063CAF59E0F2F">Department of Ecology and Botany, Andijan State University ¸ 129 University Street, 170100, Andijan, Uzbekistan. & abdurazakov. aziz 1986 @ gmail. com; https: // orcid. org / 0000 - 0001 - 9236 - 9638</mods:affiliation>
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<mods:nameIdentifier id="40FEF37D8828D3C0D6088678BA360AE8" type="email">abdurazakov.aziz1986@gmail.com</mods:nameIdentifier>
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<mods:namePart id="53ACAE50C8655DC45677D1945300CD43">Promputtha, Itthayakorn</mods:namePart>
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<mods:affiliation id="310BE885F26ACBF02D8BEE71973F89CD">Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand. & Center of Excellence in Bioresources for Agriculture, Industry and Medicine, Department of Biology, Faculty of Science, Chiang Mai University, 50200, Thailand. & itthayakorn. p @ cmu. ac. th; https: // orcid. org / 0000 - 0003 - 3376 - 4376</mods:affiliation>
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<mods:nameIdentifier id="E8EC55D99556801AF8E0E3B6B3BFC14A" type="email">itthayakorn.p@cmu.ac.th</mods:nameIdentifier>
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<mods:namePart id="524F584C62DB3E1F02FB964D60DFF2A3">Hyde, Kevin D.</mods:namePart>
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<mods:nameIdentifier id="C18B345E16ED13DC2AD2E8A7A9BD0501" type="ORCID">0000-0002-2191-0762</mods:nameIdentifier>
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<mods:affiliation id="602AA5B945301A06BF8D710DD7EB5F67">Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand. & CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan China. & Mushroom Research Foundation, 128 M. 3 Ban Pa Deng T. Pa Pae, A. Mae Taeng, Chiang Mai 50150, Thailand. & Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand. & kdhyde 3 @ gmail. com; https: // orcid. org / 0000 - 0002 - 2191 - 0762</mods:affiliation>
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<mods:nameIdentifier id="F3337AD92B86BF8E320A6F299EC589FB" type="email">kdhyde3@gmail.com</mods:nameIdentifier>
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<mods:title id="0BC8573B2D67AD88BD3E5E0F4137D11D">Phytotaxa</mods:title>
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<mods:date id="1D38281573077B32D45B2F775F28C4CD">2021</mods:date>
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<mods:number id="9F7C0640C7ED68F1887CB478DD803A20">2021-09-15</mods:number>
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<mods:number id="A05C9AA262CA5AC96E24D5F0AEF8BBEC">520</mods:number>
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<mods:url id="91F4D579FFD0C83FCDF56E32E2B4392A">http://dx.doi.org/10.11646/phytotaxa.520.2.3</mods:url>
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<subSubSection id="C366656DFFE9FFA3FF01A02BEB21C1C7" pageId="5" pageNumber="160" type="nomenclature">
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<taxonomicName id="4C7C4D65FFE9FFA3FF01A02BEB60C11F" ID-CoL="9Z9Z8" authority="Lestari, Gafforov & K.D. Hyde" authorityName="Lestari, Gafforov & K. D. Hyde" authorityYear="2021" box="[136,789,1076,1103]" class="Dothideomycetes" family="Leptosphaeriaceae" genus="Leptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="5" pageNumber="160" phylum="Ascomycota" rank="species" species="chatkalica" status="sp. nov.">
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<emphasis id="B908EAF4FFE9FFA3FF01A02BE9D9C11E" bold="true" box="[136,428,1076,1103]" italics="true" pageId="5" pageNumber="160">Leptosphaeria chatkalica</emphasis>
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Lestari, Gafforov & K.D. Hyde
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</taxonomicName>
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,
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<emphasis id="B908EAF4FFE9FFA3FCA9A02AEB00C11F" box="[800,885,1077,1102]" italics="true" pageId="5" pageNumber="160">
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<taxonomicNameLabel id="A23B578FFFE9FFA3FCA9A02AEB00C11F" box="[800,885,1077,1102]" pageId="5" pageNumber="160" rank="species">sp. nov.</taxonomicNameLabel>
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</emphasis>
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(
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<figureCitation id="13472A63FFE9FFA3FC06A02BEC79C11F" box="[911,1036,1076,1102]" captionStart="FIGURE 2" captionStartId="6.[136,229,1844,1866]" captionTargetBox="[160,1430,362,1815]" captionTargetId="figure-108@6.[151,1436,353,1820]" captionTargetPageId="6" captionText="FIGURE 2. Leptosphaeria chatkalica (TASM 6155, holotype).a–d Appearance of ascomata on host surface. e Vertical section of an ascoma. f Close-up of an ostiole. g Section of the peridium cells. h Pseudoparaphyses. i–k Asci. l–p Ascospores. q An ascospore with a mucilaginous sheath (stained in Indian ink). Scale bars: b–d = 200 μm, e = 100 μm, f = 50 μm, g = 10 μm, h = 5 μm, i–k = 20 μm, l–q = 10 μm." figureDoi="http://doi.org/10.5281/zenodo.5508877" httpUri="https://zenodo.org/record/5508877/files/figure.png" pageId="5" pageNumber="160">FIGURE 2</figureCitation>
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)
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</heading>
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</paragraph>
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<paragraph id="8BC336E6FFE9FFA3FF01A09FEB21C1C7" blockId="5.[136,956,1152,1246]" box="[136,852,1152,1174]" pageId="5" pageNumber="160">Index Fungorum number:—IF 558161, Facesoffungi number:—FoF09703</paragraph>
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</subSubSection>
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<subSubSection id="C366656DFFE9FFA0FF01A0BBED7AC419" lastPageId="6" lastPageNumber="161" pageId="5" pageNumber="160" type="etymology">
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<paragraph id="8BC336E6FFE9FFA3FF01A0BBEBC9C1EB" blockId="5.[136,956,1152,1246]" box="[136,956,1188,1210]" pageId="5" pageNumber="160">
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Etymology:—The epithet reflects the location from where the
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<typeStatus id="54C78844FFE9FFA3FD69A0BBEB41C1EB" box="[736,820,1188,1210]" pageId="5" pageNumber="160" type="holotype">holotype</typeStatus>
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was collected
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</paragraph>
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<paragraph id="8BC336E6FFE9FFA3FF01A0D7E902C18F" blockId="5.[136,956,1152,1246]" box="[136,375,1224,1246]" pageId="5" pageNumber="160">
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<materialsCitation id="3B143CBBFFE9FFA3FF01A0D7E902C18F" box="[136,375,1224,1246]" collectionCode="TASM" pageId="5" pageNumber="160" specimenCode="TASM 6155" specimenCount="1" typeStatus="holotype">
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||
<typeStatus id="54C78844FFE9FFA3FF01A0D7E897C18F" box="[136,226,1224,1246]" pageId="5" pageNumber="160" type="holotype">Holotype</typeStatus>
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:—
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<specimenCode id="DBDA9E9DFFE9FFA3FF77A0D7E902C18F" box="[254,375,1224,1246]" collectionCode="TASM" country="Uzbekistan" httpUri="http://biocol.org/urn:lsid:biocol.org:col:14691" lsid="urn:lsid:biocol.org:col:14691" name="Institute of the Gene Pool of Plants and Animals, Uzbek Academy of Sciences" pageId="5" pageNumber="160" type="Herbarium">TASM 6155</specimenCode>
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</materialsCitation>
|
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</paragraph>
|
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<paragraph id="8BC336E6FFE9FFA3FF01A113EA9EC387" blockId="5.[136,1452,1292,2075]" pageId="5" pageNumber="160">
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<emphasis id="B908EAF4FFE9FFA3FF01A113E899C077" box="[136,236,1292,1318]" italics="true" pageId="5" pageNumber="160">Saprobic</emphasis>
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||
on woody stems.
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<emphasis id="B908EAF4FFE9FFA3FE49A113EA1FC077" bold="true" box="[448,618,1292,1318]" pageId="5" pageNumber="160">Sexual morph</emphasis>
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||
:
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<emphasis id="B908EAF4FFE9FFA3FDF2A113EA9CC077" box="[635,745,1292,1318]" italics="true" pageId="5" pageNumber="160">Ascomata</emphasis>
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300–400 μm high, 350–500 μm diam. (
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<emphasis id="B908EAF4FFE9FFA3FB30A112ECB0C077" box="[1209,1221,1293,1318]" italics="true" pageId="5" pageNumber="160">x̅</emphasis>
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= 350 × 415 µm, n = 5), erumpent to superficial, solitary, scattered, appearing as small, raised black dots on the host surface, globose to subglobose with flattened bases, smooth, easily removed from the host substrate, black, ostiolate.
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<emphasis id="B908EAF4FFE9FFA3FAACA14BED03C03F" box="[1317,1398,1364,1390]" italics="true" pageId="5" pageNumber="160">Ostiole</emphasis>
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70– 110 × 70–100 μm (
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<emphasis id="B908EAF4FFE9FFA3FEE3A166E903C0C3" box="[362,374,1401,1426]" italics="true" pageId="5" pageNumber="160">x̅</emphasis>
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= 92.4 × 80.5 µm, n = 5), central, black, papillate, inconspicuous opening by a pore, ostiole canal periphysate.
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<emphasis id="B908EAF4FFE9FFA3FED5A183E9B1C0E7" box="[348,452,1436,1462]" italics="true" pageId="5" pageNumber="160">Peridium</emphasis>
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20–30 μm wide at the base, 30–80 μm at the sides, consisting two cell
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||
<typeStatus id="54C78844FFE9FFA3FB70A182ED41C0E6" box="[1273,1332,1437,1463]" pageId="5" pageNumber="160">types</typeStatus>
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of
|
||
<emphasis id="B908EAF4FFE9FFA3FAD5A182E886C08B" italics="true" pageId="5" pageNumber="160">textura angularis</emphasis>
|
||
, inner layer composed of sub-hyaline, thin-walled scleroplectenchymatous cells, outer layer comprised of dark brown thick-walled cells.
|
||
<emphasis id="B908EAF4FFE9FFA3FE62A1FBEAFDC0AF" box="[491,648,1508,1534]" italics="true" pageId="5" pageNumber="160">Hamathecium</emphasis>
|
||
1.5–2.5 μm (
|
||
<emphasis id="B908EAF4FFE9FFA3FCACA1FAEB44C0AF" box="[805,817,1509,1534]" italics="true" pageId="5" pageNumber="160">x̅</emphasis>
|
||
= 2.2 μm, n = 10) wide of numerous, septate, filiform, branched, anastomosing above the asci, cellular pseudoparaphyses.
|
||
<emphasis id="B908EAF4FFE9FFA3FC09A217EBC5C373" box="[896,944,1544,1570]" italics="true" pageId="5" pageNumber="160">Asci</emphasis>
|
||
150–190 × 9–12 μm (
|
||
<emphasis id="B908EAF4FFE9FFA3FB22A216ECC2C373" box="[1195,1207,1545,1570]" italics="true" pageId="5" pageNumber="160">x̅</emphasis>
|
||
= 167.9 × 10.6 μm, n = 20), 8-spored, bitunicate, fissitunicate, cylindrical, apically rounded, long with club-like pedicel.
|
||
<emphasis id="B908EAF4FFE9FFA3FB69A233ED2AC317" box="[1248,1375,1580,1606]" italics="true" pageId="5" pageNumber="160">Ascospores</emphasis>
|
||
20–30 × 6–9 μm (
|
||
<emphasis id="B908EAF4FFE9FFA3FE98A24EE968C33B" box="[273,285,1617,1642]" italics="true" pageId="5" pageNumber="160">x̅</emphasis>
|
||
= 24.7 × 7.6 µm, n = 30), uniseriate, partially overlapping, fusiform, with narrow to acute at both ends, initially hyaline with 1-transverse septum, becoming yellowish brown, 3-septate at maturity, broader cells above central septum, verruculose, guttulate when young and lacking at the mature stage, smooth-walled, surrounded by a mucilaginous sheath.
|
||
<emphasis id="B908EAF4FFE9FFA3FEF2A2A3EA4EC387" bold="true" box="[379,571,1724,1750]" pageId="5" pageNumber="160">Asexual morph:</emphasis>
|
||
Undetermined.
|
||
</paragraph>
|
||
<paragraph id="8BC336E6FFE9FFA3FF34A2FFEB45C213" blockId="5.[136,1452,1292,2075]" pageId="5" pageNumber="160">
|
||
<materialsCitation id="3B143CBBFFE9FFA3FF34A2FFEB5FC212" collectingDate="2019-07-21" collectionCode="TASM" collectorName="Yusufjon Gafforov, YG" country="Uzbekistan" county="Material" latitude="49.166615" location="Chatkal" longLatPrecision="1" longitude="69.749886" municipality="Chatkal Biosphere Reserve" pageId="5" pageNumber="160" specimenCode="TASM 6155" specimenCount="1" stateProvince="Toshkent Viloyati" typeStatus="holotype">
|
||
<collectingCounty id="62A24E6AFFE9FFA3FF34A2FFE969C3AB" box="[189,284,1760,1786]" pageId="5" pageNumber="160">Material</collectingCounty>
|
||
examined:—
|
||
<collectingCountry id="F36B7676FFE9FFA3FE3DA2FFEA10C3AB" box="[436,613,1760,1786]" name="Uzbekistan" pageId="5" pageNumber="160">UZBEKISTAN</collectingCountry>
|
||
.
|
||
<collectingRegion id="49B8F804FFE9FFA3FDFFA2FFEB39C3AB" box="[630,844,1760,1786]" country="Uzbekistan" name="Toshkent Viloyati" pageId="5" pageNumber="160">Tashkent Province</collectingRegion>
|
||
,
|
||
<collectingMunicipality id="6BA7AC9CFFE9FFA3FCD2A2FFECE0C3AA" box="[859,1173,1760,1787]" pageId="5" pageNumber="160">Chatkal Biosphere Reserve</collectingMunicipality>
|
||
,
|
||
<location id="8EA3603DFFE9FFA3FB2DA2FFEC8EC3AB" LSID="urn:lsid:plazi:treatment:03D587F0FFE9FFA0FF01A02BED7AC419:8EA3603DFFE9FFA3FB2DA2FFEC8EC3AB" box="[1188,1275,1760,1786]" country="Uzbekistan" county="Material" latitude="49.166615" longLatPrecision="1" longitude="69.749886" municipality="Chatkal Biosphere Reserve" name="Chatkal" pageId="5" pageNumber="160" stateProvince="Toshkent Viloyati">Chatkal</location>
|
||
ridge,
|
||
<location id="8EA3603DFFE9FFA3FAD9A2FEE90BC24F" LSID="urn:lsid:plazi:treatment:03D587F0FFE9FFA0FF01A02BED7AC419:8EA3603DFFE9FFA3FAD9A2FEE90BC24F" country="Uzbekistan" county="Material" latitude="49.166615" longLatPrecision="1" longitude="69.749886" municipality="Chatkal Biosphere Reserve" name="Western Tien Shan Mountains" pageId="5" pageNumber="160" stateProvince="Toshkent Viloyati">Western Tien Shan Mountains</location>
|
||
,
|
||
<geoCoordinate id="EE485021FFE9FFA3FE03A31BEA41C24E" box="[394,564,1796,1823]" degrees="49" direction="north" minutes="09" orientation="latitude" pageId="5" pageNumber="160" precision="1" seconds="59. 8" value="49.166615">
|
||
49°09’59.8
|
||
<emphasis id="B908EAF4FFE9FFA3FD8EA31BEA60C24F" bold="true" box="[519,533,1796,1822]" italics="true" pageId="5" pageNumber="160">”</emphasis>
|
||
N
|
||
</geoCoordinate>
|
||
,
|
||
<geoCoordinate id="EE485021FFE9FFA3FDC8A31BEA9DC24E" box="[577,744,1796,1823]" degrees="69" direction="east" minutes="44" orientation="longitude" pageId="5" pageNumber="160" precision="1" seconds="59. 6" value="69.749886">
|
||
69°44’59.6
|
||
<emphasis id="B908EAF4FFE9FFA3FD37A31BEAB9C24F" bold="true" box="[702,716,1796,1822]" italics="true" pageId="5" pageNumber="160">”</emphasis>
|
||
E
|
||
</geoCoordinate>
|
||
, dried stems of dicotyledon,
|
||
<date id="FFC21026FFE9FFA3FBB8A31BECBDC24F" box="[1073,1224,1796,1822]" pageId="5" pageNumber="160" value="2019-07-21">
|
||
<collectingDate id="EF86E9CEFFE9FFA3FBB8A31BECBDC24F" box="[1073,1224,1796,1822]" pageId="5" pageNumber="160" value="2019-07-21">21 July 2019</collectingDate>
|
||
</date>
|
||
,
|
||
<collectorName id="26895330FFE9FFA3FB5AA31BE8C5C213" pageId="5" pageNumber="160">Yusufjon Gafforov, YG</collectorName>
|
||
<emphasis id="B908EAF4FFE9FFA3FF38A337E8CFC213" bold="true" box="[177,186,1832,1858]" italics="true" pageId="5" pageNumber="160">-</emphasis>
|
||
S22
|
||
<emphasis id="B908EAF4FFE9FFA3FF6CA337E89BC213" bold="true" box="[229,238,1832,1858]" italics="true" pageId="5" pageNumber="160">-</emphasis>
|
||
2 (
|
||
<specimenCode id="DBDA9E9DFFE9FFA3FE82A337E9EEC212" box="[267,411,1832,1859]" collectionCode="TASM" country="Uzbekistan" httpUri="http://biocol.org/urn:lsid:biocol.org:col:14691" lsid="urn:lsid:biocol.org:col:14691" name="Institute of the Gene Pool of Plants and Animals, Uzbek Academy of Sciences" pageId="5" pageNumber="160" type="Herbarium">TASM 6155</specimenCode>
|
||
,
|
||
<emphasis id="B908EAF4FFE9FFA3FE2FA337EA78C213" bold="true" box="[422,525,1832,1858]" pageId="5" pageNumber="160">
|
||
<typeStatus id="54C78844FFE9FFA3FE2FA337EA78C213" box="[422,525,1832,1858]" pageId="5" pageNumber="160" type="holotype">holotype</typeStatus>
|
||
</emphasis>
|
||
;
|
||
<taxonomicName id="4C7C4D65FFE9FFA3FD92A337EA12C213" box="[539,615,1832,1858]" class="Agaricomycetes" family="Russulaceae" genus="Hkas" kingdom="Fungi" order="Russulales" pageId="5" pageNumber="158" phylum="Basidiomycota" rank="genus">HKAS</taxonomicName>
|
||
112714, isotype)
|
||
</materialsCitation>
|
||
.
|
||
</paragraph>
|
||
<paragraph id="8BC336E6FFE9FFA3FF34A353ED67C236" blockId="5.[136,1452,1292,2075]" box="[189,1298,1868,1895]" pageId="5" pageNumber="160">
|
||
<materialsCitation id="3B143CBBFFE9FFA3FF34A353EA03C237" accessionNumber="MW886101" box="[189,630,1868,1894]" pageId="5" pageNumber="160" specimenCount="1">
|
||
GenBank numbers:—ITS:
|
||
<accessionNumber id="942FAB05FFE9FFA3FE64A353EA03C237" box="[493,630,1868,1894]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MW886101" pageId="5" pageNumber="160">MW886101</accessionNumber>
|
||
</materialsCitation>
|
||
,
|
||
<materialsCitation id="3B143CBBFFE9FFA3FD0BA353EB25C237" accessionNumber="MW886099" box="[642,848,1868,1894]" pageId="5" pageNumber="160" specimenCount="1">
|
||
LSU:
|
||
<accessionNumber id="942FAB05FFE9FFA3FD4FA353EB25C237" box="[710,848,1868,1894]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MW886099" pageId="5" pageNumber="160">MW886099</accessionNumber>
|
||
</materialsCitation>
|
||
,
|
||
<materialsCitation id="3B143CBBFFE9FFA3FCD2A353EC52C237" accessionNumber="MW886100" box="[859,1063,1868,1894]" pageId="5" pageNumber="160" specimenCount="1">
|
||
SSU:
|
||
<accessionNumber id="942FAB05FFE9FFA3FC14A353EC52C237" box="[925,1063,1868,1894]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MW886100" pageId="5" pageNumber="160">MW886100</accessionNumber>
|
||
</materialsCitation>
|
||
,
|
||
<materialsCitation id="3B143CBBFFE9FFA3FBBBA353ED7AC236" accessionNumber="MW915583" box="[1074,1295,1868,1895]" pageId="5" pageNumber="160" specimenCount="1">
|
||
<emphasis id="B908EAF4FFE9FFA3FBBBA353EC01C237" box="[1074,1140,1868,1894]" italics="true" pageId="5" pageNumber="160">tef1-α</emphasis>
|
||
:
|
||
<accessionNumber id="942FAB05FFE9FFA3FB0AA353ED7AC236" box="[1155,1295,1868,1895]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MW915583" pageId="5" pageNumber="160" type="EnaNcbi">MW915583</accessionNumber>
|
||
</materialsCitation>
|
||
.
|
||
</paragraph>
|
||
<paragraph id="8BC336E6FFE9FFA0FF34A36FED7AC419" blockId="5.[136,1452,1292,2075]" lastBlockId="6.[136,1452,158,329]" lastPageId="6" lastPageNumber="161" pageId="5" pageNumber="160">
|
||
Notes:—Morphology of our fungal specimen coincides with the generic concept of
|
||
<taxonomicName id="4C7C4D65FFE9FFA3FB1BA36FED41C2DB" authorityName="Cesati & de Notaris" authorityYear="1863" box="[1170,1332,1904,1930]" class="Dothideomycetes" family="Leptosphaeriaceae" genus="Leptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="5" pageNumber="160" phylum="Ascomycota" rank="genus">
|
||
<emphasis id="B908EAF4FFE9FFA3FB1BA36FED41C2DB" box="[1170,1332,1904,1930]" italics="true" pageId="5" pageNumber="160">Leptosphaeria</emphasis>
|
||
</taxonomicName>
|
||
in having scleroplectenchyma tissue
|
||
<typeStatus id="54C78844FFE9FFA3FE34A38AE98DC2FE" box="[445,504,1941,1967]" pageId="5" pageNumber="160">types</typeStatus>
|
||
of peridium, cellular pseudoparaphyses, cylindrical asci and transversely septate ascospores (Ariyawansa
|
||
<emphasis id="B908EAF4FFE9FFA3FE20A3A6E992C283" box="[425,487,1976,2002]" italics="true" pageId="5" pageNumber="160">et al.</emphasis>
|
||
2013,
|
||
<bibRefCitation id="EFED4B17FFE9FFA3FDB7A3A6EB20C283" author="De Gruyter, J. & Woudenberg, J. H. & Aveskamp, M. M. & Verkley, G. J. & Groenewald, J. Z. & Crous, P. W." box="[574,853,1976,2003]" pageId="5" pageNumber="160" pagination="1 - 36" refId="ref6991" refString="De Gruyter, J., Woudenberg, J. H., Aveskamp, M. M., Verkley, G. J., Groenewald, J. Z. & Crous, P. W. (2013) Redisposition of phoma-like anamorphs in Pleosporales. Studies in Mycology 75: 1 - 36. https: // doi. org / 10.3114 / sim 0004." type="journal article" year="2013">
|
||
De Gruyter
|
||
<emphasis id="B908EAF4FFE9FFA3FD47A3A6EB79C283" box="[718,780,1976,2002]" italics="true" pageId="5" pageNumber="160">et al.</emphasis>
|
||
2013
|
||
</bibRefCitation>
|
||
). Based on the multi-gene analyses, our collection (
|
||
<taxonomicName id="4C7C4D65FFE9FFA3FF18A3C3E9C4C2A7" authorityName="Lestari, Gafforov & K. D. Hyde" authorityYear="2021" box="[145,433,2012,2038]" class="Dothideomycetes" family="Leptosphaeriaceae" genus="Leptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="5" pageNumber="160" phylum="Ascomycota" rank="species" species="chatkalica">
|
||
<emphasis id="B908EAF4FFE9FFA3FF18A3C3E9C4C2A7" box="[145,433,2012,2038]" italics="true" pageId="5" pageNumber="160">Leptosphaeria chatkalica</emphasis>
|
||
</taxonomicName>
|
||
) closely nested with
|
||
<taxonomicName id="4C7C4D65FFE9FFA3FD21A3C2EB7AC2A7" authorityName="D.Pem, Selcuk, Jeewon & K.D.Hyde" authorityYear="2020" box="[680,783,2013,2038]" class="Dothideomycetes" family="Leptosphaeriaceae" genus="Leptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="5" pageNumber="160" phylum="Ascomycota" rank="species" species="regiae">
|
||
<emphasis id="B908EAF4FFE9FFA3FD21A3C2EB7AC2A7" box="[680,783,2013,2038]" italics="true" pageId="5" pageNumber="160">L. regiae</emphasis>
|
||
</taxonomicName>
|
||
with 100% ML, 100% MP and 1.00 BI statistical support (
|
||
<figureCitation id="13472A63FFE9FFA3FF06AC1FE979CD4B" box="[143,268,2048,2074]" captionStart="FIGURE 1" captionStartId="4.[136,229,1932,1954]" captionTargetBox="[175,1423,199,1903]" captionTargetId="figure-21@4.[151,1436,190,1907]" captionTargetPageId="4" captionText="FIGURE 1. ML tree based on combined LSU, ITS, SSU and tef1-α partial sequence data. Bootstrap values greater than 70% (for ML and MP) and greater than 0.95 (for BI) are indicated near the nodes. The new species given in red and type strains are in bold. The tree is rooted to Pyrenochaeta protearum (CBS 131315), P.pinicola (CBS 137997) and Didymella exigua (CBS 183.55). The scale bar represents nucleotide substitutions per site." figureDoi="http://doi.org/10.5281/zenodo.5508875" httpUri="https://zenodo.org/record/5508875/files/figure.png" pageId="5" pageNumber="160">FIGURE 1</figureCitation>
|
||
).
|
||
<taxonomicName id="4C7C4D65FFE9FFA3FEAFAC1FEA33CD4B" authorityName="Lestari, Gafforov & K. D. Hyde" authorityYear="2021" box="[294,582,2048,2074]" class="Dothideomycetes" family="Leptosphaeriaceae" genus="Leptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="5" pageNumber="160" phylum="Ascomycota" rank="species" species="chatkalica">
|
||
<emphasis id="B908EAF4FFE9FFA3FEAFAC1FEA33CD4B" box="[294,582,2048,2074]" italics="true" pageId="5" pageNumber="160">Leptosphaeria chatkalica</emphasis>
|
||
</taxonomicName>
|
||
differs from
|
||
<taxonomicName id="4C7C4D65FFE9FFA3FD56AC1EEB33CD4B" authorityName="D.Pem, Selcuk, Jeewon & K.D.Hyde" authorityYear="2020" box="[735,838,2049,2074]" class="Dothideomycetes" family="Leptosphaeriaceae" genus="Leptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="5" pageNumber="160" phylum="Ascomycota" rank="species" species="regiae">
|
||
<emphasis id="B908EAF4FFE9FFA3FD56AC1EEB33CD4B" box="[735,838,2049,2074]" italics="true" pageId="5" pageNumber="160">L. regiae</emphasis>
|
||
</taxonomicName>
|
||
in having larger asci (150–190 × 9–12 μm), fusiform and larger ascospores (20–30 × 6–9 μm) with a mucilaginous sheath, whereas
|
||
<taxonomicName id="4C7C4D65FFEAFFA0FB83A480EC05C5E9" authorityName="D.Pem, Selcuk, Jeewon & K.D.Hyde" authorityYear="2020" box="[1034,1136,159,184]" class="Dothideomycetes" family="Leptosphaeriaceae" genus="Leptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="161" phylum="Ascomycota" rank="species" species="regiae">
|
||
<emphasis id="B908EAF4FFEAFFA0FB83A480EC05C5E9" box="[1034,1136,159,184]" italics="true" pageId="6" pageNumber="161">L. regiae</emphasis>
|
||
</taxonomicName>
|
||
has smaller asci (99–130 × 9–10 μm), ellipsoid to broadly fusiform and smaller ascospores (15–18 × 6–7 μm) without a sheath (
|
||
<bibRefCitation id="EFED4B17FFEAFFA0FB57A4DDEDD5C58C" author="Pem, D. & Jeewon, R. & Selcuk, F. & Ulukapi, M. & Bhat, J. & Doilom, M. & Lumyong, S. & Hyde, K. D." box="[1246,1440,194,221]" pageId="6" pageNumber="161" pagination="1 - 10" refId="ref12084" refString="Pem, D., Jeewon, R., Selcuk, F., Ulukapi, M., Bhat, J., Doilom, M., Lumyong, S. & Hyde, K. D. (2020 b) Ribosomal and protein gene phylogeny reveals novel saprobic fungal species from Juglans regia and Urtica dioica. Frontiers in Microbiology 11: 1 - 10. https: // doi. org / 10.3389 / fmicb. 2020.01303" type="journal article" year="2020">
|
||
Pem
|
||
<emphasis id="B908EAF4FFEAFFA0FA91A4DCED3AC58D" box="[1304,1359,194,220]" italics="true" pageId="6" pageNumber="161">et al.</emphasis>
|
||
2020b
|
||
</bibRefCitation>
|
||
). Additionally,
|
||
<taxonomicName id="4C7C4D65FFEAFFA0FEACA4F8E9CEC451" authorityName="Lestari, Gafforov & K. D. Hyde" authorityYear="2021" box="[293,443,230,256]" class="Dothideomycetes" family="Leptosphaeriaceae" genus="Leptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="161" phylum="Ascomycota" rank="species" species="chatkalica">
|
||
<emphasis id="B908EAF4FFEAFFA0FEACA4F8E9CEC451" box="[293,443,230,256]" italics="true" pageId="6" pageNumber="161">L. chatkalica</emphasis>
|
||
</taxonomicName>
|
||
ascospores are distinctly constricted at the septa. A comparison of the 460 nucleotides across the ITS (+
|
||
<geoCoordinate id="EE485021FFEAFFA0FECEA515E909C474" box="[327,380,266,293]" degrees="5.8" direction="south" orientation="latitude" pageId="6" pageNumber="161" precision="5555" value="-5.8">5.8S</geoCoordinate>
|
||
) gene region of
|
||
<taxonomicName id="4C7C4D65FFEAFFA0FDBAA514EAB0C475" authorityName="Lestari, Gafforov & K. D. Hyde" authorityYear="2021" box="[563,709,266,292]" class="Dothideomycetes" family="Leptosphaeriaceae" genus="Leptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="161" phylum="Ascomycota" rank="species" species="chatkalica">
|
||
<emphasis id="B908EAF4FFEAFFA0FDBAA514EAB0C475" box="[563,709,266,292]" italics="true" pageId="6" pageNumber="161">L. chatkalica</emphasis>
|
||
</taxonomicName>
|
||
and
|
||
<taxonomicName id="4C7C4D65FFEAFFA0FD72A514EB2AC475" authorityName="D.Pem, Selcuk, Jeewon & K.D.Hyde" authorityYear="2020" box="[763,863,267,292]" class="Dothideomycetes" family="Leptosphaeriaceae" genus="Leptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="161" phylum="Ascomycota" rank="species" species="regiae">
|
||
<emphasis id="B908EAF4FFEAFFA0FD72A514EB2AC475" box="[763,863,267,292]" italics="true" pageId="6" pageNumber="161">L. regiae</emphasis>
|
||
</taxonomicName>
|
||
(MFLUCC 18-1137) shows 19 base pair differences (4.12%). The main morphological differences among
|
||
<taxonomicName id="4C7C4D65FFEAFFA0FD6BA531EBA9C419" box="[738,988,302,328]" class="Dothideomycetes" family="Leptosphaeriaceae" genus="Leptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="161" phylum="Ascomycota" rank="species" species="undetermined">
|
||
<emphasis id="B908EAF4FFEAFFA0FD6BA531EBF1C419" box="[738,900,302,328]" italics="true" pageId="6" pageNumber="161">Leptosphaeria</emphasis>
|
||
species
|
||
</taxonomicName>
|
||
are presented in
|
||
<tableCitation id="C6FE035DFFEAFFA0FB12A531ED7EC419" box="[1179,1291,302,328]" captionStart="TABLE 2" captionStartId="8.[136,220,475,500]" captionText="TABLE 2. Synopsis of Leptosphaeria species with molecular data." pageId="6" pageNumber="161">TABLE 2</tableCitation>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |