123 lines
8.2 KiB
XML
123 lines
8.2 KiB
XML
<document ID-DOI="10.1099/ijsem.0.004924" ID-GBIF-Dataset="d43723ad-2e07-48a7-bf0c-90d9579a53f5" ID-ISSN="1466-5034" ID-PMC="PMC8513621" ID-PubMed="34379583" ID-Zenodo-Dep="6224136" checkinTime="1645466189168" checkinUser="felipe" docAuthor="Gaffney, James, Embree, Jordan, Gilmore, Sean & Embree, Mallory" docDate="2021" docId="03E08782CF0EFF82C23F495CFD39F969" docLanguage="en" docName="IntJSystEvolMicrobiol.71.8.004924.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology (004924) 71 (8)" docSource="http://dx.doi.org/10.1099/ijsem.0.004924" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.2:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="2" docTitle="Ruminococcus bovis Gaffney & Embree & Gilmore & Embree 2021, SP. NOV." docType="treatment" docVersion="7" lastPageNumber="6" masterDocId="FFD9FFFACF0BFF87C2464D35FFCDFFA8" masterDocTitle="RUMiNOCOCCUS BOViS sp. nov., a novel species of amylolytic RUMiNOCOCCUS isolated from the rumen of a dairy cow" masterLastPageNumber="7" masterPageNumber="1" pageNumber="6" updateTime="1668130813965" updateUser="ExternalLinkService">
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<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo>
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<mods:title>RUMiNOCOCCUS BOViS sp. nov., a novel species of amylolytic RUMiNOCOCCUS isolated from the rumen of a dairy cow</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Gaffney, James</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Embree, Jordan</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Gilmore, Sean</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Embree, Mallory</mods:namePart>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:relatedItem type="host">
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<mods:titleInfo>
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<mods:title>International Journal of Systematic and Evolutionary Microbiology</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2021</mods:date>
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<mods:detail type="series">
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<mods:title>004924</mods:title>
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</mods:detail>
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<mods:detail type="pubDate">
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<mods:number>2021-08-11</mods:number>
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</mods:detail>
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<mods:detail type="volume">
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<mods:number>71</mods:number>
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</mods:detail>
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<mods:detail type="issue">
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<mods:number>8</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>1</mods:start>
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<mods:end>7</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:location>
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<mods:url>http://dx.doi.org/10.1099/ijsem.0.004924</mods:url>
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</mods:location>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">10.1099/ijsem.0.004924</mods:identifier>
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<mods:identifier type="GBIF-Dataset">d43723ad-2e07-48a7-bf0c-90d9579a53f5</mods:identifier>
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<mods:identifier type="ISSN">1466-5034</mods:identifier>
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<mods:identifier type="PMC">PMC8513621</mods:identifier>
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<mods:identifier type="PubMed">34379583</mods:identifier>
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<mods:identifier type="Zenodo-Dep">6224136</mods:identifier>
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</mods:mods>
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<treatment ID-DOI="http://doi.org/10.5281/zenodo.6314521" ID-GBIF-Taxon="193579610" ID-Zenodo-Dep="6314521" LSID="urn:lsid:plazi:treatment:03E08782CF0EFF82C23F495CFD39F969" httpUri="http://treatment.plazi.org/id/03E08782CF0EFF82C23F495CFD39F969" lastPageNumber="6" pageId="5" pageNumber="6">
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<subSubSection pageId="5" pageNumber="6" type="nomenclature">
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<paragraph blockId="5.[120,766,1129,1729]" pageId="5" pageNumber="6">
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<heading allCaps="true" bold="true" fontSize="12" level="2" pageId="5" pageNumber="6" reason="3">
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<emphasis bold="true" box="[121,687,1129,1158]" pageId="5" pageNumber="6">
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DESCRIPTION OF
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<taxonomicName authority="Gaffney & Embree & Gilmore & Embree, 2021" authorityName="Gaffney & Embree & Gilmore & Embree" authorityYear="2021" box="[370,687,1129,1158]" class="Clostridia" family="Ruminococcaceae" genus="Ruminococcus" kingdom="Bacteria" order="Clostridiales" pageId="5" pageNumber="6" phylum="Firmicutes" rank="species" species="bovis" status="sp. nov.">
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<emphasis bold="true" box="[370,687,1129,1158]" italics="true" pageId="5" pageNumber="6">RUMINOCOCCUS BOVIS</emphasis>
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</taxonomicName>
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</emphasis>
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<emphasis bold="true" pageId="5" pageNumber="6">
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<taxonomicNameLabel pageId="5" pageNumber="6" rank="species">SP. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection pageId="5" pageNumber="6" type="etymology">
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<paragraph blockId="5.[120,766,1129,1729]" pageId="5" pageNumber="6">
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<taxonomicName authorityName="Gaffney & Embree & Gilmore & Embree" authorityYear="2021" box="[121,330,1209,1233]" class="Clostridia" family="Ruminococcaceae" genus="Ruminococcus" kingdom="Bacteria" order="Clostridiales" pageId="5" pageNumber="6" phylum="Firmicutes" rank="species" species="bovis">
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<emphasis box="[121,330,1209,1233]" italics="true" pageId="5" pageNumber="6">Ruminococcus bovis</emphasis>
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</taxonomicName>
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(bo'vis. L. gen. n.
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<taxonomicName authorityName="Gaffney & Embree & Gilmore & Embree" authorityYear="2021" box="[522,576,1209,1233]" class="Clostridia" family="Ruminococcaceae" genus="Ruminococcus" kingdom="Bacteria" order="Clostridiales" pageId="5" pageNumber="6" phylum="Firmicutes" rank="species" species="bovis">
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<emphasis box="[522,576,1209,1233]" italics="true" pageId="5" pageNumber="6">bovis</emphasis>
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</taxonomicName>
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of the cow)
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<taxonomicName authorityName="Gaffney & Embree & Gilmore & Embree" authorityYear="2021" box="[121,344,1255,1279]" class="Clostridia" family="Ruminococcaceae" genus="Ruminococcus" kingdom="Bacteria" order="Clostridiales" pageId="5" pageNumber="6" phylum="Firmicutes" rank="species" species="bovis">
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<emphasis box="[121,344,1255,1279]" italics="true" pageId="5" pageNumber="6">Ruminococcus bovis</emphasis>
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</taxonomicName>
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is an obligately anaerobic, catalasenegative and oxidase-negative bacterium. It is Gram-stainpositive and forms chains of small cocci when cultured in liquid medium. When cultured on TSB+FAC solid medium, it forms small, slightly opaque, off-white, circular colonies with even margins. Fermentation of D-galactose,D-glucose, D-fructose, maltose, glycogen, aesculin/ferric citrate and starch is indicated by API
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<collectingCountry box="[416,456,1472,1496]" name="Switzerland" pageId="5" pageNumber="6">CH</collectingCountry>
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50. The major fermentation product is acetate, with ethanol and glycerol as minor products. No lactate, butyrate, butanol, propionate, succinate or pyruvate is produced.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="5" pageNumber="6" type="description">
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<paragraph blockId="5.[120,766,1129,1729]" pageId="5" pageNumber="6">
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<materialsCitation ID-GBIF-Occurrence="3470368301" collectionCode="JE" country="United States of America" location="Tulare" municipality="Tulare" pageId="5" pageNumber="6" specimenCode="JE7A12T" specimenCount="1" stateProvince="California" typeStatus="holotype">
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The type strain is
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<specimenCode box="[346,439,1610,1636]" pageId="5" pageNumber="6">
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JE7A12
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<superScript attach="left" box="[429,439,1610,1624]" fontSize="6" pageId="5" pageNumber="6">T</superScript>
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</specimenCode>
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(=ATCC TSD-225
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<superScript attach="none" box="[661,671,1610,1624]" fontSize="6" pageId="5" pageNumber="6">T</superScript>
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=NCTC 14479
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<superScript attach="none" box="[185,195,1641,1655]" fontSize="6" pageId="5" pageNumber="6">T</superScript>
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) and was originally isolated from rumen content of a healthy, Holstein cow from
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<collectingMunicipality box="[448,519,1674,1698]" pageId="5" pageNumber="6">Tulare</collectingMunicipality>
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,
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<collectingRegion box="[531,643,1674,1698]" country="United States of America" name="California" pageId="5" pageNumber="6">California</collectingRegion>
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,
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<collectingCountry box="[655,710,1674,1698]" name="United States of America" pageId="5" pageNumber="6">USA</collectingCountry>
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. The genomic DNA G+C content of the type strain is 34.6 mol%.
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</materialsCitation>
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |