333 lines
34 KiB
XML
333 lines
34 KiB
XML
<document ID-DOI="10.1371/journal.pone.0179555" ID-GBIF-Dataset="6ea2cc5c-857b-4b47-8135-8bff7efbd1fc" ID-PMC="PMC5526618" ID-PubMed="28742835" ID-Zenodo-Dep="4251352" approvedBy="poa" checkinTime="1604676189431" checkinUser="tatiana" docAuthor="Voon-Ching Lim, Rosli Ramli, Subha Bhassu & John-James Wilson" docDate="2017" docId="03F3F77FFF8FFF91FDB4D5FEBA33FC3B" docLanguage="en" docName="PLoSOne.12.7.e0179555.pdf.imf" docOrigin="PLoS ONE 12 (7)" docStyle="DocumentStyle{}" docTitle="Hipposideros ipposideros subsp. halophyllus Hill and Yenbutra 1984" docType="treatment" docVersion="7" lastPageNumber="20" masterDocId="FFCA8F07FF9EFF82FF81D072BF4BFFA2" masterDocTitle="A checklist of the bats of Peninsular Malaysia and progress towards a DNA barcode reference library" masterLastPageNumber="65" masterPageNumber="1" pageNumber="18" updateTime="1668143238971" updateUser="ExternalLinkService" zenodo-license-document="CC-BY-4.0">
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<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo>
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<mods:title>A checklist of the bats of Peninsular Malaysia and progress towards a DNA barcode reference library</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Voon-Ching Lim</mods:namePart>
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<mods:affiliation>Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia</mods:affiliation>
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<mods:nameIdentifier type="email">voonchinglim@gmail.com</mods:nameIdentifier>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Rosli Ramli</mods:namePart>
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<mods:affiliation>Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Subha Bhassu</mods:namePart>
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<mods:affiliation>Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia,</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>John-James Wilson</mods:namePart>
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<mods:affiliation>International College Beijing, China Agricultural University, Beijing, P. R. China</mods:affiliation>
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<mods:nameIdentifier type="email">wilso04@gmail.com</mods:nameIdentifier>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:relatedItem type="host">
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<mods:titleInfo>
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<mods:title>PLoS ONE</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2017</mods:date>
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<mods:detail type="pubDate">
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<mods:number>2017-07-25</mods:number>
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</mods:detail>
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<mods:detail type="volume">
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<mods:number>12</mods:number>
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</mods:detail>
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<mods:detail type="issue">
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<mods:number>7</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>1</mods:start>
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<mods:end>65</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">10.1371/journal.pone.0179555</mods:identifier>
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<mods:identifier type="GBIF-Dataset">6ea2cc5c-857b-4b47-8135-8bff7efbd1fc</mods:identifier>
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<mods:identifier type="PMC">PMC5526618</mods:identifier>
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<mods:identifier type="PubMed">28742835</mods:identifier>
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<mods:identifier type="Zenodo-Dep">4251352</mods:identifier>
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</mods:mods>
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<treatment ID-DOI="http://doi.org/10.5281/zenodo.4343593" ID-GBIF-Taxon="168816151" ID-Zenodo-Dep="4343593" LSID="urn:lsid:plazi:treatment:03F3F77FFF8FFF91FDB4D5FEBA33FC3B" httpUri="http://treatment.plazi.org/id/03F3F77FFF8FFF91FDB4D5FEBA33FC3B" lastPageId="19" lastPageNumber="20" pageId="17" pageNumber="18">
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<subSubSection box="[565,1100,1420,1445]" pageId="17" pageNumber="18" type="nomenclature">
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<paragraph blockId="17.[533,1534,1420,1896]" box="[565,1100,1420,1445]" pageId="17" pageNumber="18">
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<heading box="[565,1100,1420,1445]" pageId="17" pageNumber="18">
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<taxonomicName authority="Hill and Yenbutra, 1984" authorityName="Hill and Yenbutra" authorityYear="1984" box="[565,1100,1420,1445]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="17" pageNumber="18" phylum="Chordata" rank="subSpecies" species="ipposideros" subSpecies="halophyllus">
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<emphasis bold="true" box="[565,838,1420,1444]" italics="true" pageId="17" pageNumber="18">Hipposideros halophyllus</emphasis>
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Hill and Yenbutra, 1984
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</taxonomicName>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection pageId="17" pageNumber="18" type="reference_group">
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<paragraph blockId="17.[533,1534,1420,1896]" pageId="17" pageNumber="18">
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<taxonomicName authority="Hill and Yenbutra, 1984: 77" authorityName="Hill and Yenbutra" authorityPageNumber="77" authorityYear="1984" box="[565,1124,1455,1480]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="17" pageNumber="18" phylum="Chordata" rank="species" species="halophyllus">
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<emphasis box="[565,823,1455,1479]" italics="true" pageId="17" pageNumber="18">Hipposideros halophyllus</emphasis>
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<materialsCitation ID-GBIF-Occurrence="2960680363" box="[830,1124,1456,1480]" collectionCode="TNRC" collectorName="Kitti Thonglongya" country="Thailand" location="Khao Sa Moa Khon" municipality="Tha Woong" pageId="17" pageNumber="18" specimenCode="TNRC 54-3694" specimenCount="1" stateProvince="Lop Buri">Hill and Yenbutra, 1984: 77</materialsCitation>
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</taxonomicName>
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;
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<location LSID="urn:lsid:plazi:treatment:03F3F77FFF8FFF91FDB4D5FEBA33FC3B:8E8510B2FF8FFF93FBEED5C2BA74FA6A" box="[1135,1343,1456,1480]" country="Thailand" municipality="Tha Woong" name="Khao Sa Moa Khon" pageId="17" pageNumber="18" stateProvince="Lop Buri">Khao Sa Moa Khon</location>
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(= Khao Sa Moa Khon),
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<collectingMunicipality box="[614,742,1490,1514]" pageId="17" pageNumber="18">Tha Woong</collectingMunicipality>
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(= Ta Woong),
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<collectingRegion box="[913,1009,1490,1514]" country="Thailand" name="Lop Buri" pageId="17" pageNumber="18">Lop Buri</collectingRegion>
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,
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<collectingCountry box="[1019,1155,1490,1514]" name="Thailand" pageId="17" pageNumber="18">THAILAND</collectingCountry>
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(
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<collectorName box="[1168,1368,1490,1514]" pageId="17" pageNumber="18">Kitti Thonglongya</collectorName>
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, collector;
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<specimenCode box="[533,702,1525,1549]" collectionCode="TNRC" pageId="17" pageNumber="18">TNRC 54–3694</specimenCode>
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) [
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<bibRefCitation author="Hill JE & Yenbutra SO" box="[723,761,1525,1549]" journalOrPublisher="Bull Br Mus." pageId="17" pageNumber="18" pagination="77 - 82" part="47" refId="ref42704" refString="115. Hill JE, Yenbutra SO. A new species of the Hipposideros bicolor group (Chiroptera: Hipposideridae) from Thailand. Bull Br Mus. 1984; 47: 77 - 82." title="A new species of the Hipposideros bicolor group (Chiroptera: Hipposideridae) from Thailand" type="journal article" year="1984">115</bibRefCitation>
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].
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</paragraph>
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</subSubSection>
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<subSubSection box="[565,1045,1560,1584]" pageId="17" pageNumber="18" type="vernacular_names">
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<paragraph blockId="17.[533,1534,1420,1896]" box="[565,1045,1560,1584]" pageId="17" pageNumber="18">
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<emphasis bold="true" box="[565,834,1560,1584]" pageId="17" pageNumber="18">Common English name:</emphasis>
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Thai Roundleaf Bat
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</paragraph>
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</subSubSection>
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<subSubSection pageId="17" pageNumber="18" type="materials_examined">
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<paragraph blockId="17.[533,1534,1420,1896]" pageId="17" pageNumber="18">
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<emphasis bold="true" box="[565,822,1594,1618]" pageId="17" pageNumber="18">
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<emphasis bold="true" box="[565,815,1594,1618]" italics="true" pageId="17" pageNumber="18">Barcode Index Number</emphasis>
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:
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</emphasis>
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<collectionCode box="[828,898,1594,1618]" pageId="17" pageNumber="18">BOLD</collectionCode>
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:AAX1220 (1 DNA barcode from Peninsular
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<collectingCountry box="[1375,1471,1594,1618]" name="Malaysia" pageId="17" pageNumber="18">Malaysia</collectingCountry>
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;
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<figureCitation captionStart="Fig 4" captionStartId="18.[500,532,1848,1867]" captionTargetBox="[500,1536,208,1832]" captionTargetId="figure-1@18.[500,1536,208,1832]" captionTargetPageId="18" captionText="Fig 4. Neighbour-joining tree showing all available DNA barcodes for species in family Hipposideridae reported from Peninsular Malaysia. The percentage of pseudoreplicate trees (±70%) in which the DNA barcodes clustered together in the bootstrap test (500 pseudoreplicates) are shown above the branches. Abbreviation as follows: PM = Peninsular Malaysia,VN = Vietnam, BN = Borneo (including Sabah & Sarawak of East Malaysia, Brunei and Kalimantan Indonesia), TH = Thailand, LA = Laos, SM = Sumatera Indonesia, CH = China, CM = Cambodia. https://doi.org/10.1371/journal.pone.0179555.g004" figureDoi="http://doi.org/10.5281/zenodo.4251362" httpUri="https://zenodo.org/record/4251362/files/figure.png" pageId="17" pageNumber="18">Fig 4</figureCitation>
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)
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</paragraph>
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</subSubSection>
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<subSubSection lastPageId="19" lastPageNumber="20" pageId="17" pageNumber="18" type="discussion">
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<paragraph blockId="17.[533,1534,1420,1896]" pageId="17" pageNumber="18">
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<emphasis bold="true" box="[565,669,1664,1688]" pageId="17" pageNumber="18">Remarks:</emphasis>
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The BIN also contains a DNA barcode labelled as
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<taxonomicName authorityName="Templeton" authorityYear="1848" box="[1203,1275,1664,1688]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="17" pageNumber="18" phylum="Chordata" rank="species" species="ater">
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<emphasis box="[1203,1223,1664,1687]" italics="true" pageId="17" pageNumber="18">H</emphasis>
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.
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<emphasis box="[1235,1275,1664,1687]" italics="true" pageId="17" pageNumber="18">ater</emphasis>
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</taxonomicName>
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from
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<collectingCountry box="[1340,1396,1664,1688]" name="India" pageId="17" pageNumber="18">India</collectingCountry>
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which was originally mined from Genbank. The DNA barcode of
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<emphasis box="[1113,1120,1698,1721]" italics="true" pageId="17" pageNumber="18">“</emphasis>
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<taxonomicName authorityName="Templeton" authorityYear="1848" box="[1120,1198,1698,1722]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="17" pageNumber="18" phylum="Chordata" rank="species" species="ater">
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<emphasis box="[1120,1143,1698,1721]" italics="true" pageId="17" pageNumber="18">H</emphasis>
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.
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<emphasis box="[1155,1198,1698,1721]" italics="true" pageId="17" pageNumber="18">ater</emphasis>
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</taxonomicName>
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<emphasis box="[1198,1205,1698,1721]" italics="true" pageId="17" pageNumber="18">”</emphasis>
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is likely to be a case of misidentification as
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<taxonomicName authorityName="Hill and Yenbutra" authorityYear="1984" box="[709,858,1733,1757]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="17" pageNumber="18" phylum="Chordata" rank="species" species="halophyllus">
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<emphasis box="[709,729,1734,1757]" italics="true" pageId="17" pageNumber="18">H</emphasis>
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.
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<emphasis box="[741,858,1733,1757]" italics="true" pageId="17" pageNumber="18">halophyllus</emphasis>
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</taxonomicName>
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and
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<taxonomicName authorityName="Templeton" authorityYear="1848" box="[911,983,1733,1757]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="17" pageNumber="18" phylum="Chordata" rank="species" species="ater">
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<emphasis box="[911,931,1734,1757]" italics="true" pageId="17" pageNumber="18">H</emphasis>
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.
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<emphasis box="[943,983,1734,1757]" italics="true" pageId="17" pageNumber="18">ater</emphasis>
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</taxonomicName>
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are distinct species.
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<taxonomicName authorityName="Hill and Yenbutra" authorityYear="1984" box="[1200,1348,1733,1757]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="17" pageNumber="18" phylum="Chordata" rank="species" species="halophyllus">
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<emphasis box="[1200,1220,1734,1757]" italics="true" pageId="17" pageNumber="18">H</emphasis>
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.
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<emphasis box="[1231,1348,1733,1757]" italics="true" pageId="17" pageNumber="18">halophyllus</emphasis>
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</taxonomicName>
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has a kidneyshaped internarial septum whereas
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<taxonomicName authorityName="Templeton" authorityYear="1848" box="[908,980,1768,1792]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="17" pageNumber="18" phylum="Chordata" rank="species" species="ater">
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<emphasis box="[908,928,1768,1791]" italics="true" pageId="17" pageNumber="18">H</emphasis>
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.
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<emphasis box="[940,980,1768,1791]" italics="true" pageId="17" pageNumber="18">ater</emphasis>
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</taxonomicName>
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has a slightly inflated and triangular internarial septum [
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<bibRefCitation author="Douangboubpha B & Bumrungsri S & Soisook P & Murray SW & Puechmaille SJ & Satasook C" box="[592,617,1802,1826]" journalOrPublisher="Acta Chiropt." pageId="17" pageNumber="18" pagination="29 - 50" part="12" refId="ref39009" refString="30. Douangboubpha B, Bumrungsri S, Soisook P, Murray SW, Puechmaille SJ, Satasook C, et al. A taxonomic review of Hipposideros halophyllus, with additional information on H. ater and H. cineraceus (Chiroptera: Hipposideridae) from Thailand and Myanmar. Acta Chiropt. 2010; 12 (1): 29 - 50." title="A taxonomic review of Hipposideros halophyllus, with additional information on H. ater and H. cineraceus (Chiroptera: Hipposideridae) from Thailand and Myanmar" type="journal article" year="2010">30</bibRefCitation>
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]. It is unlikely that
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<taxonomicName authorityName="Templeton" authorityYear="1848" box="[823,894,1802,1826]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="17" pageNumber="18" phylum="Chordata" rank="species" species="ater">
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<emphasis box="[823,843,1803,1826]" italics="true" pageId="17" pageNumber="18">H</emphasis>
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.
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<emphasis box="[854,894,1803,1826]" italics="true" pageId="17" pageNumber="18">ater</emphasis>
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</taxonomicName>
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occurs in Peninsular
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<collectingCountry box="[1125,1219,1802,1826]" name="Malaysia" pageId="17" pageNumber="18">Malaysia</collectingCountry>
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due to the lack of any records, however, Peninsular
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<collectingCountry box="[815,909,1837,1861]" name="Malaysia" pageId="17" pageNumber="18">Malaysia</collectingCountry>
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is included in the distribution range of
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<taxonomicName authorityName="Templeton" authorityYear="1848" box="[1328,1400,1837,1861]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="17" pageNumber="18" phylum="Chordata" rank="species" species="ater">
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<emphasis box="[1328,1348,1838,1861]" italics="true" pageId="17" pageNumber="18">H</emphasis>
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.
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<emphasis box="[1360,1400,1838,1861]" italics="true" pageId="17" pageNumber="18">ater</emphasis>
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</taxonomicName>
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in some literature [
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<bibRefCitation author="Davison GW & Zubaid A." box="[646,659,1872,1896]" journalOrPublisher="Kuala Lumpur: Forest Research Institute Malaysia" pageId="17" pageNumber="18" pagination="3 - 27" refId="ref37723" refString="1. Davison GW, Zubaid A. The status of mammalian biodiversity in Malaysia. Status of Biological Diversity in Malaysia and Threat Assessment of Plant Species in Malaysia. Kuala Lumpur: Forest Research Institute Malaysia; 2007. pp. 3 - 27." title="The status of mammalian biodiversity in Malaysia. Status of Biological Diversity in Malaysia and Threat Assessment of Plant Species in Malaysia" type="book chapter" year="2007">1</bibRefCitation>
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,
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<bibRefCitation author="Corbet GB & Hill JE" box="[670,683,1872,1896]" journalOrPublisher="Oxford: Oxford University Press" pageId="17" pageNumber="18" refId="ref38080" refString="9. Corbet GB, Hill JE. The mammals of the Indomalayan region: a systematic review. Oxford: Oxford University Press; 1992." title="The mammals of the Indomalayan region: a systematic review" type="book" year="1992">9</bibRefCitation>
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].
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</paragraph>
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<caption ID-DOI="http://doi.org/10.5281/zenodo.4251362" ID-Zenodo-Dep="4251362" httpUri="https://zenodo.org/record/4251362/files/figure.png" lastPageId="19" lastPageNumber="20" pageId="18" pageNumber="19" startId="18.[500,532,1848,1867]" targetBox="[500,1536,208,1832]" targetPageId="18">
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<paragraph blockId="18.[500,1507,1848,1892]" lastBlockId="19.[500,1517,200,295]" lastPageId="19" lastPageNumber="20" pageId="18" pageNumber="19">
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<emphasis bold="true" pageId="18" pageNumber="19">
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Fig 4. Neighbour-joining tree showing all available DNA barcodes for species in family
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<taxonomicName authorityName="Lydekker" authorityYear="1891" box="[1355,1507,1848,1867]" class="Mammalia" family="Hipposideridae" kingdom="Animalia" order="Chiroptera" pageId="18" pageNumber="19" phylum="Chordata" rank="family">Hipposideridae</taxonomicName>
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reported from Peninsular Malaysia.
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</emphasis>
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The percentage of pseudoreplicate trees (±70%) in which the DNA barcodes clustered together in the bootstrap test (500 pseudoreplicates) are shown above the branches. Abbreviation as follows: PM = Peninsular Malaysia,VN = Vietnam, BN = Borneo (including Sabah & Sarawak of East Malaysia, Brunei and Kalimantan Indonesia), TH = Thailand, LA = Laos, SM = Sumatera Indonesia,
|
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</paragraph>
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<paragraph blockId="19.[500,1517,200,295]" box="[500,775,276,295]" pageId="19" pageNumber="20">CH = China, CM = Cambodia.</paragraph>
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<paragraph blockId="19.[500,907,318,337]" box="[500,907,318,337]" pageId="19" pageNumber="20">https://doi.org/10.1371/journal.pone.0179555.g004</paragraph>
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</caption>
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<paragraph blockId="19.[533,1532,377,575]" box="[565,834,377,401]" pageId="19" pageNumber="20">
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<heading bold="true" box="[565,834,377,401]" fontSize="10" level="3" pageId="19" pageNumber="20" reason="6">
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<emphasis bold="true" box="[565,710,377,401]" pageId="19" pageNumber="20">IUCN status:</emphasis>
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Vulnerable
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection pageId="19" pageNumber="20" type="distribution">
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<paragraph blockId="19.[533,1532,377,575]" box="[565,1337,412,436]" pageId="19" pageNumber="20">
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<emphasis bold="true" box="[565,705,412,436]" pageId="19" pageNumber="20">Recorded at:</emphasis>
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<materialsCitation ID-GBIF-Occurrence="2960680326" box="[711,1332,412,436]" collectionCode="Iucn" location="Tumang Lembing Cave" municipality="Bukit Jerneh Cave" pageId="19" pageNumber="20" specimenCount="1" stateProvince="Perak">
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<emphasis bold="true" box="[711,775,412,436]" pageId="19" pageNumber="20">
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<collectingRegion box="[711,775,412,436]" country="Malaysia" name="Perak" pageId="19" pageNumber="20">Perak</collectingRegion>
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</emphasis>
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:
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<collectingMunicipality box="[787,979,412,436]" pageId="19" pageNumber="20">Bukit Jerneh Cave</collectingMunicipality>
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and
|
||
<location LSID="urn:lsid:plazi:treatment:03F3F77FFF8FFF91FDB4D5FEBA33FC3B:8E8510B2FF8DFF91FB86D1EEBA49FE16" box="[1031,1282,412,436]" municipality="Bukit Jerneh Cave" name="Tumang Lembing Cave" pageId="19" pageNumber="20" stateProvince="Perak">Tumang Lembing Cave</location>
|
||
[
|
||
<bibRefCitation author="Douangboubpha B & Bumrungsri S & Soisook P & Murray SW & Puechmaille SJ & Satasook C" box="[1296,1321,412,436]" journalOrPublisher="Acta Chiropt." pageId="19" pageNumber="20" pagination="29 - 50" part="12" refId="ref39009" refString="30. Douangboubpha B, Bumrungsri S, Soisook P, Murray SW, Puechmaille SJ, Satasook C, et al. A taxonomic review of Hipposideros halophyllus, with additional information on H. ater and H. cineraceus (Chiroptera: Hipposideridae) from Thailand and Myanmar. Acta Chiropt. 2010; 12 (1): 29 - 50." title="A taxonomic review of Hipposideros halophyllus, with additional information on H. ater and H. cineraceus (Chiroptera: Hipposideridae) from Thailand and Myanmar" type="journal article" year="2010">30</bibRefCitation>
|
||
]
|
||
</materialsCitation>
|
||
.
|
||
</paragraph>
|
||
<paragraph blockId="19.[533,1532,377,575]" pageId="19" pageNumber="20">
|
||
<taxonomicName authorityName="Hill and Yenbutra" authorityYear="1984" box="[565,714,446,471]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="19" pageNumber="20" phylum="Chordata" rank="species" species="halophyllus">
|
||
<emphasis box="[565,585,447,470]" italics="true" pageId="19" pageNumber="20">H</emphasis>
|
||
.
|
||
<emphasis box="[597,714,446,470]" italics="true" pageId="19" pageNumber="20">halophyllus</emphasis>
|
||
</taxonomicName>
|
||
has been recorded in and nearby limestone caves in Peninsular
|
||
<collectingCountry box="[1392,1486,447,471]" name="Malaysia" pageId="19" pageNumber="20">Malaysia</collectingCountry>
|
||
and
|
||
<collectingCountry box="[533,629,481,505]" name="Thailand" pageId="19" pageNumber="20">Thailand</collectingCountry>
|
||
[
|
||
<bibRefCitation author="Francis CM" box="[644,669,481,505]" journalOrPublisher="New Holland Publishers" pageId="19" pageNumber="20" refId="ref38235" refString="14. Francis CM. A field guide to the mammals of South-East Asia. New Holland Publishers; 2008." title="A field guide to the mammals of South-East Asia" type="book" year="2008">14</bibRefCitation>
|
||
,
|
||
<bibRefCitation author="Douangboubpha B & Bumrungsri S & Soisook P & Murray SW & Puechmaille SJ & Satasook C" box="[681,706,481,505]" journalOrPublisher="Acta Chiropt." pageId="19" pageNumber="20" pagination="29 - 50" part="12" refId="ref39009" refString="30. Douangboubpha B, Bumrungsri S, Soisook P, Murray SW, Puechmaille SJ, Satasook C, et al. A taxonomic review of Hipposideros halophyllus, with additional information on H. ater and H. cineraceus (Chiroptera: Hipposideridae) from Thailand and Myanmar. Acta Chiropt. 2010; 12 (1): 29 - 50." title="A taxonomic review of Hipposideros halophyllus, with additional information on H. ater and H. cineraceus (Chiroptera: Hipposideridae) from Thailand and Myanmar" type="journal article" year="2010">30</bibRefCitation>
|
||
]. It is unknown whether
|
||
<taxonomicName authorityName="Hill and Yenbutra" authorityYear="1984" box="[975,1123,481,505]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="19" pageNumber="20" phylum="Chordata" rank="species" species="halophyllus">
|
||
<emphasis box="[975,995,482,505]" italics="true" pageId="19" pageNumber="20">H</emphasis>
|
||
.
|
||
<emphasis box="[1006,1123,481,505]" italics="true" pageId="19" pageNumber="20">halophyllus</emphasis>
|
||
</taxonomicName>
|
||
is strictly confined to limestone areas or this association is an effect of limited sampling but it is likely that the species requires specialised roosting habitat [
|
||
<bibRefCitation author="Douangboubpha B & Bumrungsri S & Soisook P & Murray SW & Puechmaille SJ & Satasook C" box="[801,826,551,575]" journalOrPublisher="Acta Chiropt." pageId="19" pageNumber="20" pagination="29 - 50" part="12" refId="ref39009" refString="30. Douangboubpha B, Bumrungsri S, Soisook P, Murray SW, Puechmaille SJ, Satasook C, et al. A taxonomic review of Hipposideros halophyllus, with additional information on H. ater and H. cineraceus (Chiroptera: Hipposideridae) from Thailand and Myanmar. Acta Chiropt. 2010; 12 (1): 29 - 50." title="A taxonomic review of Hipposideros halophyllus, with additional information on H. ater and H. cineraceus (Chiroptera: Hipposideridae) from Thailand and Myanmar" type="journal article" year="2010">30</bibRefCitation>
|
||
].
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection pageId="19" pageNumber="20" type="discussion">
|
||
<paragraph blockId="19.[533,1534,585,921]" pageId="19" pageNumber="20">
|
||
<heading box="[565,977,585,609]" pageId="19" pageNumber="20">
|
||
<emphasis bold="true" box="[565,977,585,609]" pageId="19" pageNumber="20">
|
||
<taxonomicName box="[565,788,585,609]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="19" pageNumber="20" phylum="Chordata" rank="subSpecies" species="ipposideros" subSpecies="bicolor">
|
||
<emphasis bold="true" box="[565,788,585,609]" italics="true" pageId="19" pageNumber="20">Hipposiderosbicolor</emphasis>
|
||
</taxonomicName>
|
||
speciescomplex.
|
||
</emphasis>
|
||
</heading>
|
||
<taxonomicName baseAuthorityName="Temminck" baseAuthorityYear="1834" box="[998,1209,585,609]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="19" pageNumber="20" phylum="Chordata" rank="species" species="bicolor">
|
||
<emphasis box="[998,1209,585,609]" italics="true" pageId="19" pageNumber="20">Hipposiderosbicolor</emphasis>
|
||
</taxonomicName>
|
||
wasfirstrecognisedasacryptic species complex by Kingston et al. [
|
||
<bibRefCitation author="Kingston T & Lara MC & Jones G & Akbar Z & Kunz TH & Schneider CJ" box="[942,967,620,644]" journalOrPublisher="Proc R Soc Lond B Biol Sci" pageId="19" pageNumber="20" pagination="1381 - 6" part="268" refId="ref38329" refString="16. Kingston T, Lara MC, Jones G, Akbar Z, Kunz TH, Schneider CJ. Acoustic divergence in two cryptic H ipposideros species: a role for social selection? Proc R Soc Lond B Biol Sci 2001; 268 (1474): 1381 - 6." title="Acoustic divergence in two cryptic H ipposideros species: a role for social selection?" type="journal article" year="2001">16</bibRefCitation>
|
||
] who discovered two phonic
|
||
<typeStatus box="[1280,1335,620,644]" pageId="19" pageNumber="20">types</typeStatus>
|
||
under
|
||
<taxonomicName baseAuthorityName="Temminck" baseAuthorityYear="1834" box="[1410,1512,620,644]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="19" pageNumber="20" phylum="Chordata" rank="species" species="bicolor">
|
||
<emphasis box="[1410,1430,620,643]" italics="true" pageId="19" pageNumber="20">H</emphasis>
|
||
.
|
||
<emphasis box="[1442,1512,620,644]" italics="true" pageId="19" pageNumber="20">bicolor</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel box="[533,638,655,679]" pageId="19" pageNumber="20" sensu="lato">sensu lato</taxonomicNameLabel>
|
||
with individuals echolocating at 131 kHz (=
|
||
<taxonomicName baseAuthorityName="Temminck" baseAuthorityYear="1834" box="[1113,1223,655,679]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="19" pageNumber="26" phylum="Chordata" rank="species" species="bicolor">
|
||
<emphasis box="[1113,1133,655,678]" italics="true" pageId="19" pageNumber="20">H</emphasis>
|
||
. bicolor
|
||
</taxonomicName>
|
||
131) or at 142 kHz (=
|
||
<taxonomicName baseAuthorityName="Temminck" baseAuthorityYear="1834" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="19" pageNumber="26" phylum="Chordata" rank="species" species="bicolor">
|
||
<emphasis box="[1452,1472,655,678]" italics="true" pageId="19" pageNumber="20">H</emphasis>
|
||
. bicolor
|
||
</taxonomicName>
|
||
142). The two phonic
|
||
<typeStatus box="[841,896,689,713]" pageId="19" pageNumber="20">types</typeStatus>
|
||
are 6.5–6.8% divergent in mtDNA [
|
||
<bibRefCitation author="Kingston T & Lara MC & Jones G & Akbar Z & Kunz TH & Schneider CJ" box="[1280,1305,689,713]" journalOrPublisher="Proc R Soc Lond B Biol Sci" pageId="19" pageNumber="20" pagination="1381 - 6" part="268" refId="ref38329" refString="16. Kingston T, Lara MC, Jones G, Akbar Z, Kunz TH, Schneider CJ. Acoustic divergence in two cryptic H ipposideros species: a role for social selection? Proc R Soc Lond B Biol Sci 2001; 268 (1474): 1381 - 6." title="Acoustic divergence in two cryptic H ipposideros species: a role for social selection?" type="journal article" year="2001">16</bibRefCitation>
|
||
] yet morphologically similar and overlap in size [
|
||
<bibRefCitation author="Kingston T & Lara MC & Jones G & Akbar Z & Kunz TH & Schneider CJ" box="[825,850,724,748]" journalOrPublisher="Proc R Soc Lond B Biol Sci" pageId="19" pageNumber="20" pagination="1381 - 6" part="268" refId="ref38329" refString="16. Kingston T, Lara MC, Jones G, Akbar Z, Kunz TH, Schneider CJ. Acoustic divergence in two cryptic H ipposideros species: a role for social selection? Proc R Soc Lond B Biol Sci 2001; 268 (1474): 1381 - 6." title="Acoustic divergence in two cryptic H ipposideros species: a role for social selection?" type="journal article" year="2001">16</bibRefCitation>
|
||
]. Although the phonic
|
||
<typeStatus box="[1098,1153,724,748]" pageId="19" pageNumber="20">types</typeStatus>
|
||
have been widely recognised as distinct species, some recent reports still use
|
||
<taxonomicName baseAuthorityName="Temminck" baseAuthorityYear="1834" box="[975,1076,758,783]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="19" pageNumber="20" phylum="Chordata" rank="species" species="bicolor">
|
||
<emphasis box="[975,995,759,782]" italics="true" pageId="19" pageNumber="20">H</emphasis>
|
||
.
|
||
<emphasis box="[1006,1076,758,782]" italics="true" pageId="19" pageNumber="20">bicolor</emphasis>
|
||
</taxonomicName>
|
||
to represent both phonic
|
||
<typeStatus box="[1351,1406,759,783]" pageId="19" pageNumber="20">types</typeStatus>
|
||
[
|
||
<bibRefCitation author="Jayaraj VK & Daud SH & Azhar MI & Sah SA & Mokhtar SI & Abdullah MT" box="[1420,1445,759,783]" journalOrPublisher="Check List." pageId="19" pageNumber="20" pagination="1439 - 48" part="9" refId="ref39984" refString="50. Jayaraj VK, Daud SH, Azhar MI, Sah SA, Mokhtar SI, Abdullah MT. Diversity and conservation status of mammals in Wang Kelian State Park, Perlis, Malaysia. Check List. 2013; 9 (6): 1439 - 48." title="Diversity and conservation status of mammals in Wang Kelian State Park, Perlis, Malaysia" type="journal article" year="2013">50</bibRefCitation>
|
||
,
|
||
<bibRefCitation author="Hasan NH & Khan K & Senawi J & Ketol B & Sait I & Abdullah MT" box="[1458,1483,759,783]" journalOrPublisher="J Trop Biol Conserv." pageId="19" pageNumber="20" pagination="156 - 162" part="9" refId="ref40520" refString="61. Hasan NH, Khan K, Senawi J, Ketol B, Sait I, Abdullah MT. A report on bats survey at Air Panas-Gua Musang, Kelantan, Malaysia. J Trop Biol Conserv. 2012; 9 (2): 156 - 162." title="A report on bats survey at Air Panas-Gua Musang, Kelantan, Malaysia" type="journal article" year="2012">61</bibRefCitation>
|
||
,
|
||
<bibRefCitation author="Jayaraj VK & Tahir NF & Udin NA & Baharin NF & Ismail SK & Zakaria SN" box="[1495,1520,759,783]" journalOrPublisher="J Threat Taxa." pageId="19" pageNumber="20" pagination="2617 - 2628" part="4" refId="ref40846" refString="67. Jayaraj VK, Tahir NF, Udin NA, Baharin NF, Ismail SK, Zakaria SN. Species diversity of small mammals at Gunung Stong State Park, Kelantan, Malaysia. J Threat Taxa. 2012; 4 (6): 2617 - 2628." title="Species diversity of small mammals at Gunung Stong State Park, Kelantan, Malaysia" type="journal article" year="2012">67</bibRefCitation>
|
||
,
|
||
<bibRefCitation author="Joann CL & Fletcher C & Salim HMW & Abdul-Rahman K & Harrison RD & Potts MD" box="[533,571,793,817]" journalOrPublisher="Mal Nat J." pageId="19" pageNumber="20" pagination="569 - 576" part="63" refId="ref42568" refString="111. Joann CL, Fletcher C, Salim HMW, Abdul-Rahman K, Harrison RD, Potts MD. Insectivorous bat assemblage in the hill dipterocarp forest of Temengor Forest Reserve, Peninsular Malaysia. Mal Nat J. 2011; 63 (3): 569 - 576." title="Insectivorous bat assemblage in the hill dipterocarp forest of Temengor Forest Reserve, Peninsular Malaysia" type="journal article" year="2011">111</bibRefCitation>
|
||
] which leads to ambiguity regarding the occurrence of the species. The two phonic
|
||
<typeStatus box="[1455,1510,793,817]" pageId="19" pageNumber="20">types</typeStatus>
|
||
were recently formalised under Latin names:
|
||
<taxonomicName baseAuthorityName="Temminck" baseAuthorityYear="1834" box="[1012,1114,828,852]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="19" pageNumber="20" phylum="Chordata" rank="species" species="bicolor">
|
||
<emphasis box="[1012,1032,828,851]" italics="true" pageId="19" pageNumber="20">H</emphasis>
|
||
.
|
||
<emphasis box="[1044,1114,828,852]" italics="true" pageId="19" pageNumber="20">bicolor</emphasis>
|
||
</taxonomicName>
|
||
(= bicolor131) and
|
||
<taxonomicName authorityName="K. Andersen" authorityYear="1918" box="[1325,1410,828,852]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="19" pageNumber="20" phylum="Chordata" rank="species" species="atrox">
|
||
<emphasis box="[1325,1345,828,851]" italics="true" pageId="19" pageNumber="20">H</emphasis>
|
||
.
|
||
<emphasis box="[1356,1410,828,851]" italics="true" pageId="19" pageNumber="20">atrox</emphasis>
|
||
</taxonomicName>
|
||
(= bicolor142) [
|
||
<bibRefCitation author="Douangboubpha B & Bumrungsri S & Soisook P & Satasook C & Thomas NM & Bates PJ" box="[671,696,863,887]" journalOrPublisher="Acta. Chiropt." pageId="19" pageNumber="20" pagination="415 - 438" part="12" refId="ref38382" refString="17. Douangboubpha B, Bumrungsri S, Soisook P, Satasook C, Thomas NM, Bates PJ. A taxonomic review of the Hipposideros bicolor species complex and H. pomona (Chiroptera: Hipposideridae) in Thailand. Acta. Chiropt. 2010; 12 (2): 415 - 438." title="A taxonomic review of the Hipposideros bicolor species complex and H. pomona (Chiroptera: Hipposideridae) in Thailand" type="journal article" year="2010">17</bibRefCitation>
|
||
]. However, our search of DNA barcodes on BOLD coupled with recent DNA barcoding suggested that the
|
||
<taxonomicName baseAuthorityName="Temminck" baseAuthorityYear="1834" box="[843,944,897,921]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="19" pageNumber="20" phylum="Chordata" rank="species" species="bicolor">
|
||
<emphasis box="[843,863,898,921]" italics="true" pageId="19" pageNumber="20">H</emphasis>
|
||
.
|
||
<emphasis box="[874,944,897,921]" italics="true" pageId="19" pageNumber="20">bicolor</emphasis>
|
||
</taxonomicName>
|
||
complex is even more complicated (
|
||
<figureCitation box="[1332,1385,897,921]" captionStart="Fig 4" captionStartId="18.[500,532,1848,1867]" captionTargetBox="[500,1536,208,1832]" captionTargetId="figure-1@18.[500,1536,208,1832]" captionTargetPageId="18" captionText="Fig 4. Neighbour-joining tree showing all available DNA barcodes for species in family Hipposideridae reported from Peninsular Malaysia. The percentage of pseudoreplicate trees (±70%) in which the DNA barcodes clustered together in the bootstrap test (500 pseudoreplicates) are shown above the branches. Abbreviation as follows: PM = Peninsular Malaysia,VN = Vietnam, BN = Borneo (including Sabah & Sarawak of East Malaysia, Brunei and Kalimantan Indonesia), TH = Thailand, LA = Laos, SM = Sumatera Indonesia, CH = China, CM = Cambodia. https://doi.org/10.1371/journal.pone.0179555.g004" figureDoi="http://doi.org/10.5281/zenodo.4251362" httpUri="https://zenodo.org/record/4251362/files/figure.png" pageId="19" pageNumber="20">Fig 4</figureCitation>
|
||
).
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |