222 lines
19 KiB
XML
222 lines
19 KiB
XML
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<mods:title id="86F29F3D981D4482DDF020D3E755B213">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
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<mods:namePart id="77F0F1FEE845FE33977C9E858AA9C338">Zheng, Jinshui</mods:namePart>
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<mods:namePart id="63B2583547AB72209893B020CEE594FE">Wittouck, Stijn</mods:namePart>
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<mods:namePart id="2A6D80FB269F580233DC2CF4C81611DF">Salvetti, Elisa</mods:namePart>
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<mods:namePart id="B732B9F09A8F435C2BE09252B3D4A3B7">Franz, Charles M. A. P.</mods:namePart>
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<mods:namePart id="11AE4C121AA0E61E1E9124A7DA585551">O’Toole, Paul W.</mods:namePart>
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<mods:namePart id="A4FC2082CDEF3E05250367CCDB39F2CC">Pot, Bruno</mods:namePart>
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<mods:namePart id="202A6A7A04EE8079D515D84D24074241">Walter, Jens</mods:namePart>
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<mods:namePart id="F1DBCBEC083EC6BFFCAFF386A68975F1">Watanabe, Koichi</mods:namePart>
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<mods:namePart id="745F3DF760C8131A1ACCD4A813627E38">Wuyts, Sander</mods:namePart>
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<mods:namePart id="93F6565AD1FB45E5DBD34762D29B1A39">Felis, Giovanna E.</mods:namePart>
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<mods:namePart id="DACFE0E1DF9968688C61C923903A03DD">Gänzle, Michael G.</mods:namePart>
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<mods:namePart id="EE0FE53F278A97482468D2982138D6DF">Lebeer, Sarah</mods:namePart>
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<mods:title id="B3D1A1E90CAB69ED8B556621C97044D9">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:date id="2E1889A7684EFA024A9EF2C5F8F221A9">2020</mods:date>
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<mods:number id="A228FBEB32A456F0952E635162941646">2020-04-01</mods:number>
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<mods:number id="AB91DB0CD47CB9835CFE426C3FE65243">70</mods:number>
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<treatment id="0389878AFFA3215FD94EFCFFFDCD67FC" ID-DOI="http://doi.org/10.5281/zenodo.6309912" ID-Zenodo-Dep="6309912" LSID="urn:lsid:plazi:treatment:0389878AFFA3215FD94EFCFFFDCD67FC" httpUri="http://treatment.plazi.org/id/0389878AFFA3215FD94EFCFFFDCD67FC" lastPageNumber="2828" pageId="46" pageNumber="2828">
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<subSubSection id="C33A6517FFA3215FD94EFCFFFE5961CC" pageId="46" pageNumber="2828" type="nomenclature">
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<paragraph id="8B9F369CFFA3215FD94EFCFFFE5961CC" blockId="46.[121,766,873,1435]" pageId="46" pageNumber="2828">
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<heading id="D0D781F0FFA3215FD94EFCFFFE5961CC" allCaps="true" bold="true" fontSize="12" level="2" pageId="46" pageNumber="2828" reason="3">
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<emphasis id="B954EA8EFFA3215FD94EFCFFFE5961CC" bold="true" pageId="46" pageNumber="2828">
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DESCRIPTION OF
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<taxonomicName id="4C204D1FFFA3215FD845FCFFFEE661CC" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" class="Bacilli" family="Lactobacillaceae" genus="Lactiplantibacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="46" pageNumber="2828" phylum="Firmicutes" rank="species" species="songbeiensis" status="comb. nov.">
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<emphasis id="B954EA8EFFA3215FD845FCFFFEE661CC" bold="true" italics="true" pageId="46" pageNumber="2828">LACTIPLANTIBACILLUS SONGBEIENSIS</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A26757F5FFA3215FD866FC18FE5961CC" box="[337,502,910,939]" pageId="46" pageNumber="2828" rank="species">COMB. NOV.</taxonomicNameLabel>
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</emphasis>
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<subSubSection id="C33A6517FFA3215FD94EFC2EFF546669" pageId="46" pageNumber="2828" type="etymology">
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<paragraph id="8B9F369CFFA3215FD94EFC2EFF546669" blockId="46.[121,766,873,1435]" pageId="46" pageNumber="2828">
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<taxonomicName id="4C204D1FFFA3215FD94EFC2EFE6761B7" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[121,456,952,976]" class="Bacilli" family="Lactobacillaceae" genus="Lactiplantibacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="46" pageNumber="2828" phylum="Firmicutes" rank="species" species="songbeiensis">
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<emphasis id="B954EA8EFFA3215FD94EFC2EFE6761B7" box="[121,456,952,976]" italics="true" pageId="46" pageNumber="2828">Lactiplantibacillus songbeiensis</emphasis>
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</taxonomicName>
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(song.bei.en’sis. N.L. masc. adj.
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<taxonomicName id="4C204D1FFFA3215FD990FC41FE896188" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[167,294,983,1007]" class="Bacilli" family="Lactobacillaceae" genus="Lactiplantibacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="46" pageNumber="2828" phylum="Firmicutes" rank="species" species="songbeiensis">
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<emphasis id="B954EA8EFFA3215FD990FC41FE896188" box="[167,294,983,1007]" italics="true" pageId="46" pageNumber="2828">songbeiensis</emphasis>
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</taxonomicName>
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pertaining to Songbei, a district in Harbin city,
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<collectingCountry id="F337760CFFA3215FD99DFC60FF5F6669" box="[170,240,1014,1038]" name="China" pageId="46" pageNumber="2828">China</collectingCountry>
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).
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</paragraph>
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<subSubSection id="C33A6517FFA3215FD94EFBB2FD956694" pageId="46" pageNumber="2828" type="description">
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<paragraph id="8B9F369CFFA3215FD94EFBB2FD576657" blockId="46.[121,766,873,1435]" box="[121,760,1058,1084]" pageId="46" pageNumber="2828">
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Basonym:
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<taxonomicName id="4C204D1FFFA3215FD9D0FBB5FD07665B" authority="Liu and Gu 2019" authorityName="Liu and Gu" authorityYear="2019" box="[231,680,1059,1084]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="46" pageNumber="2828" phylum="Firmicutes" rank="species" species="songbeiensis">
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<emphasis id="B954EA8EFFA3215FD9D0FBB5FE5C665C" box="[231,499,1059,1083]" italics="true" pageId="46" pageNumber="2828">Lactobacillus songbeiensis</emphasis>
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Liu and Gu 2019
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</taxonomicName>
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, 3259
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<superScript id="7C559BD4FFA3215FDBD3FBB4FD576657" attach="none" box="[740,760,1058,1072]" fontSize="6" pageId="46" pageNumber="2828">VP</superScript>
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</paragraph>
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<paragraph id="8B9F369CFFA3215FD94EFBC7FEDC66A2" blockId="46.[121,766,873,1435]" pageId="46" pageNumber="2828">
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Characteristics are similar to
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<taxonomicName id="4C204D1FFFA3215FD889FBC4FDC5660E" authorityName="Liu and Gu" authorityYear="2019" box="[446,618,1105,1129]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="46" pageNumber="2828" phylum="Firmicutes" rank="species" species="pingfangensis">
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<emphasis id="B954EA8EFFA3215FD889FBC4FDC5660E" box="[446,618,1105,1129]" italics="true" pageId="46" pageNumber="2828">L. pingfangensis</emphasis>
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</taxonomicName>
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but the
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<typeStatus id="549B883EFFA3215FDBFEFBC4FD57660D" box="[713,760,1106,1130]" pageId="46" pageNumber="2828">type</typeStatus>
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strain of
|
||
<taxonomicName id="4C204D1FFFA3215FD9D1FBE7FE2666EF" authorityName="Liu and Gu" authorityYear="2019" box="[230,393,1136,1160]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="46" pageNumber="2828" phylum="Firmicutes" rank="species" species="songbeiensis">
|
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<emphasis id="B954EA8EFFA3215FD9D1FBE7FE2666EF" box="[230,393,1136,1160]" italics="true" pageId="46" pageNumber="2828">L. songbeiensis</emphasis>
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</taxonomicName>
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||
also ferments ribose [
|
||
<bibRefCitation id="EFB14B6DFFA3215FDBBBFBE6FD1566EF" author="Liu DD & Gu CT" box="[652,698,1136,1160]" pageId="46" pageNumber="2828" pagination="3237 - 3247" refId="ref70066" refString="233. Liu DD, Gu CT. Lactobacillus pingfangensis sp. nov., Lactobacillus daoliensis sp. nov., Lactobacillus nangangensis sp. nov., Lactobacillus daowaiensis sp. nov., Lactobacillus dongliensis sp. nov., Lactobacillus songbeiensis sp. nov. and Lactobacillus kaifaensis sp. nov., isolated from traditional Chinese pickle. Int J Syst Evol Microbiol 2019; 69: 3237 - 3247." type="journal article" year="2019">233</bibRefCitation>
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||
]. The genome size of the
|
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<typeStatus id="549B883EFFA3215FD87EFB19FED866C0" box="[329,375,1167,1191]" pageId="46" pageNumber="2828">type</typeStatus>
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||
strain is 3.03 Mbp. The mol% G+C content of DNA is 44.4.
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</paragraph>
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||
<paragraph id="8B9F369CFFA3215FD94EFB4DFD956694" blockId="46.[121,766,873,1435]" box="[121,570,1243,1267]" pageId="46" pageNumber="2828">Isolated from fermented Chinese cabbage.</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFA3215FD94EFA9FFF536758" pageId="46" pageNumber="2828" type="materials_examined">
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<paragraph id="8B9F369CFFA3215FD94EFA9FFF536758" blockId="46.[121,766,873,1435]" pageId="46" pageNumber="2828">
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<materialsCitation id="3B483CC1FFA3215FD94EFA9FFF596753" accessionNumber="LMG 31174" collectionCode="T, LMG" pageId="46" pageNumber="2828" specimenCode="NCIMB 15189, CCM 8931" specimenCount="1" typeStatus="holotype">
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The
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strain is 398–2
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<collectionCode id="ED31AE59FFA3215FD896FA9FFE756746" box="[417,474,1289,1313]" country="Belgium" httpUri="http://grbio.org/cool/0fkg-rcci" name="Belgian Coordinated Collections of Microorganisms/ LMG Bacteria Collection" pageId="46" pageNumber="2828">LMG</collectionCode>
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31174
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<specimenCode id="DB869EE7FFA3215FD94EFABEFF426727" box="[121,237,1320,1344]" collectionCode="CCM" country="USA" httpUri="http://grbio.org/cool/kk87-ti93" name="Carter County Museum" pageId="46" pageNumber="2828">CCM 8931</specimenCode>
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</materialsCitation>
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.
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||
</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFA3215FD94EFAC3FD1A670A" box="[121,693,1365,1389]" pageId="46" pageNumber="2828" type="description">
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<paragraph id="8B9F369CFFA3215FD94EFAC3FD1A670A" blockId="46.[121,766,873,1435]" box="[121,693,1365,1389]" pageId="46" pageNumber="2828">Genome sequence accession number: BJDL00000000.</paragraph>
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</subSubSection>
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<paragraph id="8B9F369CFFA3215FD94EFA15FDCD67FC" blockId="46.[121,766,873,1435]" box="[121,610,1411,1435]" pageId="46" pageNumber="2828">
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16S rRNA gene accession number:
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||
<accessionNumber id="9473AB7FFFA3215FD8D9FA15FDF167FC" box="[494,606,1411,1435]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/LC438523" pageId="46" pageNumber="2828">LC438523</accessionNumber>
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.
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||
</paragraph>
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</subSubSection>
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</treatment>
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</document> |