754 lines
89 KiB
XML
754 lines
89 KiB
XML
<document id="887681F782D6CC8F1DC9F9491513FFD0" ID-CLB-Dataset="29922" ID-DOI="10.11646/zootaxa.4433.1.10" ID-GBIF-Dataset="0c009c85-2761-48a2-84c4-b1fa5d433594" ID-ISSN="1175-5326" ID-Zenodo-Dep="1287791" ID-ZooBank="5CFBD211-5D37-4CF9-AD53-0EEAC9B4BF5F" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1528809865417" checkinUser="plazi" docAuthor="Maria, Munawar, Cai, Ruihang, Qu, Nan, Castillo, Pablo & Zheng, Jingwu" docDate="2018" docId="03BF87E10E58B141FF35FDF5FA86FA08" docLanguage="en" docName="zootaxa.4433.1.10.pdf.imf" docOrigin="Zootaxa 4433 (1)" docStyle="DocumentStyle:647186512141C8FC8976D5BCC54AEB7D.9:Zootaxa.2013-.journal_article" docStyleId="647186512141C8FC8976D5BCC54AEB7D" docStyleName="Zootaxa.2013-.journal_article" docStyleVersion="9" docTitle="Hemicycliophora subbotini Maria & Cai & Qu & Castillo & Zheng 2018, n. sp." docType="treatment" docVersion="7" lastPageNumber="170" masterDocId="FF86FF990E5AB148FFA2FFF0FFBBFFB0" masterDocTitle="Morphological and molecular characterization of Hemicycliophora subbotini n. sp. (Tylenchida: Hemicycliophoridae) from China" masterLastPageNumber="173" masterPageNumber="161" pageNumber="163" updateTime="1698548333167" updateUser="ExternalLinkService">
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<mods:title id="B8DCAC209066C2AD24278777D9B0164C">Morphological and molecular characterization of Hemicycliophora subbotini n. sp. (Tylenchida: Hemicycliophoridae) from China</mods:title>
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<mods:namePart id="64B0E15929CF069E161CE913A914E69B">Maria, Munawar</mods:namePart>
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<mods:namePart id="DCD2F6BC0E232596EBB866DB93390BB3">Cai, Ruihang</mods:namePart>
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<mods:namePart id="7A6E56E9CE1FC36AD2CC5E5BC82B2980">Qu, Nan</mods:namePart>
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<mods:namePart id="3E631E2A52A778821AF3BE2CCC2477ED">Castillo, Pablo</mods:namePart>
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<mods:namePart id="6DB0EF92283E90CBEEA1CB3BC0AB3EFF">Zheng, Jingwu</mods:namePart>
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<mods:date id="1E0636D9FD22214233B06D5344C937B6">2018</mods:date>
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<treatment id="03BF87E10E58B141FF35FDF5FA86FA08" ID-DOI="http://doi.org/10.5281/zenodo.5967860" ID-GBIF-Taxon="145939597" ID-Zenodo-Dep="5967860" LSID="urn:lsid:plazi:treatment:03BF87E10E58B141FF35FDF5FA86FA08" httpUri="http://treatment.plazi.org/id/03BF87E10E58B141FF35FDF5FA86FA08" lastPageId="9" lastPageNumber="170" pageId="2" pageNumber="163">
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<paragraph id="8BA936F70E58B14AFF35FDF5FD9EFDAF" blockId="2.[151,549,517,577]" box="[151,549,517,543]" pageId="2" pageNumber="163">
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<heading id="D0E1819B0E58B14AFF35FDF5FD9EFDAF" bold="true" box="[151,549,517,543]" fontSize="11" level="1" pageId="2" pageNumber="163" reason="1">
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<emphasis id="B962EAE50E58B14AFF35FDF5FD9EFDAF" bold="true" box="[151,549,517,543]" pageId="2" pageNumber="163">
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<taxonomicName id="4C164D740E58B14AFF35FDF5FE65FDAF" authority="Maria & Cai & Qu & Castillo & Zheng, 2018" authorityName="Maria & Cai & Qu & Castillo & Zheng" authorityYear="2018" box="[151,478,517,543]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="2" pageNumber="163" phylum="Nematoda" rank="species" species="subbotini" status="sp. nov.">
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<emphasis id="B962EAE50E58B14AFF35FDF5FE65FDAF" bold="true" box="[151,478,517,543]" italics="true" pageId="2" pageNumber="163">Hemicycliophora subbotini</emphasis>
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<taxonomicNameLabel id="A251579E0E58B14AFE41FDF5FD9EFDAF" box="[483,549,517,543]" pageId="2" pageNumber="163" rank="species">n. sp.</taxonomicNameLabel>
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<paragraph id="8BA936F70E58B14AFF35FDD9FEFAFDF1" blockId="2.[151,549,517,577]" box="[151,321,552,577]" pageId="2" pageNumber="163">
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(See
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<figureCitation id="132D2A720E58B14AFF72FDD8FE83FDF1" box="[208,312,552,577]" captionStart-0="FIGURE 1" captionStart-1="FIGURE 2" captionStart-2="FIGURE 3" captionStart-3="FIGURE 4" captionStart-4="FIGURE 5" captionStartId-0="4.[151,250,1920,1942]" captionStartId-1="5.[151,250,1915,1937]" captionStartId-2="6.[151,250,1929,1951]" captionStartId-3="7.[151,250,1801,1823]" captionStartId-4="8.[151,250,1920,1942]" captionTargetBox-0="[207,1404,212,1890]" captionTargetBox-1="[193,1396,193,1886]" captionTargetBox-2="[152,1432,234,1876]" captionTargetBox-3="[160,1428,199,1770]" captionTargetBox-4="[172,1415,195,1898]" captionTargetId-0="figure@4.[170,1414,195,1900]" captionTargetId-1="figure@5.[193,1396,193,1894]" captionTargetId-2="figure@6.[151,1436,228,1881]" captionTargetId-3="figure@7.[160,1429,196,1776]" captionTargetId-4="figure@8.[172,1416,193,1902]" captionTargetPageId-0="4" captionTargetPageId-1="5" captionTargetPageId-2="6" captionTargetPageId-3="7" captionTargetPageId-4="8" captionText-0="FIGURE 1. Line drawings of Hemicycliophora subbotini n. sp. Female. A: Pharyngeal region; B–D: Various lip regions; E–G: En face view of lip region; H: SEM Vulval region; I: SEM Lateral field; J: Reproductive system; K, L: Vulval region; M, N: Stylet basal knobs; M: SEM Posterior region showing vulva and anus; P–R: Female tails. (Scale bars: A = 20 µm, B–D, E–G, K–N, P–R = 10 µm, H, I = 30 µm, O = 50 µm.)" captionText-1="FIGURE 2. Light photomicrographs of Hemicycliophora subbotini n. sp. Female. A: Entire body; B, C Pharyngeal region, arrows showing position of base of pharyngeal bulb and excretory pore; D: Posterior region, arrows showing position of vulva and anus; E, F: Stylet basal knobs; G, H: Vulval regions; I: Lateral field; J–L: Female tails arrows showing position of anus. (Scale bars: A, D = 40 µm, B, C = 20 µm, E–L= 10 µm.)" captionText-2="FIGURE 3. Scanning electron micrographs of Hemicycliophora subbotini n. sp. female. A: Entire body; B–D: En face view of lip region; E: Vulval region; F, G: Posterior region, arrows showing position of vulva (v) and anus (a); H: Female tail arrow showing the position of anus I: Lateral field. (Scale bars: A = 250 µm; B–D: 5 µm; E = 15 µm; F, G, I: 25 µm; H: 20 µm.)" captionText-3="FIGURE 4. Phylogenetic relationships of Hemicycliophora subbotini n. sp. Bayesian 50% majority rule consensus tree as inferred from D2 and D3 expansion segments of 28S rRNA sequence alignment under a transitional of invariable sites with invariable sites and a gamma-shaped distribution model (TIM3 + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. Scale bar = expected changes per site." captionText-4="FIGURE 5. Phylogenetic relationships of Hemicycliophora subbotini n. sp. Bayesian 50% majority rule consensus tree as inferred from ITS rRNA sequence alignment under a transitional of invariable sites with invariable sites and a gamma-shaped distribution model (TIM2 + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. Scale bar = expected changes per site." httpUri-0="https://zenodo.org/record/1287793/files/figure.png" httpUri-1="https://zenodo.org/record/1287795/files/figure.png" httpUri-2="https://zenodo.org/record/1287797/files/figure.png" httpUri-3="https://zenodo.org/record/1287799/files/figure.png" httpUri-4="https://zenodo.org/record/1287801/files/figure.png" pageId="2" pageNumber="163">Figs. 1–5</figureCitation>
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)
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</paragraph>
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</subSubSection>
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<subSubSection id="C30C657C0E58B14AFF35FD80FE1FFB7C" pageId="2" pageNumber="163" type="description">
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<paragraph id="8BA936F70E58B14AFF35FD80FE66FD39" blockId="2.[151,1437,624,1984]" box="[151,477,624,649]" pageId="2" pageNumber="163">
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<emphasis id="B962EAE50E58B14AFF35FD80FEF6FD39" bold="true" box="[151,333,624,649]" pageId="2" pageNumber="163">Measurements.</emphasis>
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See
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<tableCitation id="C694034C0E58B14AFE21FD80FE6CFD39" box="[387,471,624,649]" captionStart="TABLE 1" captionStartId="3.[151,239,152,175]" captionText="TABLE 1. Morphometrics of Hemicycliophora subbotini n. sp. female. All measurements are in µm and in the form: mean ± s.d. (range)." pageId="2" pageNumber="163">Table 1</tableCitation>
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.
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</paragraph>
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<paragraph id="8BA936F70E58B14AFF65FD64FD7DFB18" blockId="2.[151,1437,624,1984]" pageId="2" pageNumber="163">
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<emphasis id="B962EAE50E58B14AFF65FD64FEE2FD1D" bold="true" box="[199,345,660,685]" pageId="2" pageNumber="163">Description.</emphasis>
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<emphasis id="B962EAE50E58B14AFEC5FD64FE78FD1C" box="[359,451,660,684]" italics="true" pageId="2" pageNumber="163">Female.</emphasis>
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Body straight or slightly ventrally arcuate after heat relaxation. Cuticular sheath detached from inner cuticle at pharyngeal, vulval and tail regions. Annuli rounded with ornamentation appearing as few breaks, irregularities and anastomosis. Lip region conoid, not set off from body contour containing 2–3 annuli and with bulging oral disc, sometimes protruding beyond first annulus. Oral disc narrow ovate, convex anteriorly, amphidial apertures covered by lateral plates, lying in the same plane as oral disc when observed
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<emphasis id="B962EAE50E58B14AFB5BFCD5FAF1FC8C" box="[1273,1354,804,828]" italics="true" pageId="2" pageNumber="163">en face</emphasis>
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. Stylet long and flexible. Stylet knobs posteriorly slopping, concave shaped with slight cavity. Dorsal pharyngeal gland opening
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<emphasis id="B962EAE50E58B14AFF5BFC9DFEA8FC34" box="[249,275,877,900]" italics="true" pageId="2" pageNumber="163">ca</emphasis>
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4.0–5.0 µm posterior to stylet knob base. Pharyngeal lumen looped in median pharyngeal bulb having medium sized refractive valvular apparatus. Isthmus narrow, short, encircled by nerve ring. Basal pharyngeal bulb distinct. Excretory pore one or two annuli posterior to the base of pharynx. Hemizonid and hemizonion not seen. Vulva lips slightly modified with 1–2 annuli long vulval sleeve. Vagina straight extending less than half of body diam. Spermatheca rounded to oblong, scarcely filled with rounded sperm cells. Oviduct very short, ovary single, prodelphic. Oocytes arranged in single file except for a short region of multiplication near anterior end. Anus small, indistinct, located at 15th–22nd annuli posterior to vulva. Tail almost cylindrical anteriorly, tapering gradually to a distal finely conoid terminus or slightly offset spike with a narrowly rounded terminus. Tail annuli distinct until terminus except terminal annuli become irregular.
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</paragraph>
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<paragraph id="8BA936F70E58B14AFF65FB43FE1FFB7C" blockId="2.[151,1437,624,1984]" box="[199,420,1203,1228]" pageId="2" pageNumber="163">
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<emphasis id="B962EAE50E58B14AFF65FB43FEB3FB7B" box="[199,264,1203,1227]" italics="true" pageId="2" pageNumber="163">Male.</emphasis>
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Not detected.
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</paragraph>
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</subSubSection>
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<subSubSection id="C30C657C0E58B14AFF65FB27FCB6F870" pageId="2" pageNumber="163" type="diagnosis">
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<paragraph id="8BA936F70E58B14AFF65FB27FF67FA5C" blockId="2.[151,1437,624,1984]" pageId="2" pageNumber="163">
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<emphasis id="B962EAE50E58B14AFF65FB27FEFAFB40" bold="true" box="[199,321,1239,1264]" pageId="2" pageNumber="163">Diagnosis.</emphasis>
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<taxonomicName id="4C164D740E58B14AFEE8FB27FDC6FB5F" authority="Maria & Cai & Qu & Castillo & Zheng, 2018" authorityName="Maria & Cai & Qu & Castillo & Zheng" authorityYear="2018" box="[330,637,1239,1263]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="2" pageNumber="163" phylum="Nematoda" rank="species" species="subbotini" status="sp. nov.">
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<emphasis id="B962EAE50E58B14AFEE8FB27FDC6FB5F" box="[330,637,1239,1263]" italics="true" pageId="2" pageNumber="163">Hemicycliophora subbotini</emphasis>
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</taxonomicName>
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<emphasis id="B962EAE50E58B14AFD24FB27FD7CFB40" bold="true" box="[646,711,1239,1264]" pageId="2" pageNumber="163">
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<taxonomicNameLabel id="A251579E0E58B14AFD24FB27FD7CFB40" box="[646,711,1239,1264]" pageId="2" pageNumber="163" rank="species">n. sp.</taxonomicNameLabel>
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</emphasis>
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is characterized by the combination of three unique characters, tail morphology (elongated, conoid or slightly offset spike with narrowly rounded terminus), long stylet 118 (108– 125) µm and posteriorly located vulva 91 (90–93). Additionally, a lip region conoid, not set off with bulging oral disc, sometimes protruding beyond the first annulus. Oral disc narrow ovate, convex anteriorly, amphidial apertures covered by lateral plates, lying in the same plane as oral disc when observed
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<emphasis id="B962EAE50E58B14AFBC5FA98FB03FACF" box="[1127,1208,1383,1407]" italics="true" pageId="2" pageNumber="163">en face</emphasis>
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. The excretory pore is located 1–2 annuli posterior to the base of pharyngeal bulb. Reproductive system prodelphic, vulval lips slightly modified with a small vulval sleeve, spermatheca rounded to oblong. Anus located 18 (15–22) annuli posterior to vulva.
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</paragraph>
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<paragraph id="8BA936F70E58B14AFF65FA07FCB6F870" blockId="2.[151,1437,624,1984]" pageId="2" pageNumber="163">
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<emphasis id="B962EAE50E58B14AFF65FA07FECBF9A0" bold="true" box="[199,368,1527,1552]" pageId="2" pageNumber="163">Relationships.</emphasis>
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Chitambar & Subbotin (2014) presented a polytomous key to identify
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<taxonomicName id="4C164D740E58B14AFB78FA07FA27F9BF" authorityName="de Man" authorityYear="1921" box="[1242,1436,1527,1551]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="2" pageNumber="163" phylum="Nematoda" rank="genus">
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<emphasis id="B962EAE50E58B14AFB78FA07FA27F9BF" box="[1242,1436,1527,1551]" italics="true" pageId="2" pageNumber="163">Hemicycliophora</emphasis>
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</taxonomicName>
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species. According to the polytomous key, new species is close to
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<taxonomicName id="4C164D740E58B14AFCDDF9ECFB1CF983" authority="Doucet, 1982" authorityName="Doucet" authorityYear="1982" box="[895,1191,1563,1587]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="2" pageNumber="163" phylum="Nematoda" rank="species" species="filicauda">
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<emphasis id="B962EAE50E58B14AFCDDF9ECFBBDF983" box="[895,1030,1563,1587]" italics="true" pageId="2" pageNumber="163">H. filicauda</emphasis>
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<bibRefCitation id="EF874B060E58B14AFBAFF9ECFB1CF983" box="[1037,1191,1563,1587]" pageId="2" pageNumber="163" refId="ref5252" refString="Doucet, M. E. (1982) Quatre nouvelles especes du genre Hemicycliophora De Man, 1921 (Nematoda: Tylenchida) provenant d'Argentine. Revue de Nematologie, 5, 309 - 320." type="journal article">Doucet, 1982</bibRefCitation>
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</taxonomicName>
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,
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<taxonomicName id="4C164D740E58B14AFB10F9ECFEA6F9E8" authority="Jenkins & Reed, 1964" authorityName="Jenkins & Reed" authorityYear="1964" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="2" pageNumber="163" phylum="Nematoda" rank="species" species="metleri">
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<emphasis id="B962EAE50E58B14AFB10F9ECFA98F983" box="[1202,1315,1563,1587]" italics="true" pageId="2" pageNumber="163">H. metleri</emphasis>
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<bibRefCitation id="EF874B060E58B14AFA89F9EBFEA6F9E8" pageId="2" pageNumber="163" refId="ref5354" refString="Jenkins, W. R., & Reed, J. P. (1964) Two new species of Hemicycliophora (Nematoda: Criconematidae) with a note on Hemicycliophora ritteri. Nematologica, 10, 111 - 115. https: // doi. org / 10.1163 / 187529264 X 00718" type="journal article">Jenkins & Reed, 1964</bibRefCitation>
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</taxonomicName>
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, H.
|
||
<taxonomicName id="4C164D740E58B14AFEF0F9CFFD84F9E8" authority="Loof, 1968" authorityName="Loof" authorityYear="1968" box="[338,575,1599,1624]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="2" pageNumber="163" phylum="Nematoda" rank="species" species="nucleata">
|
||
<emphasis id="B962EAE50E58B14AFEF0F9CFFE09F9E7" box="[338,434,1599,1623]" italics="true" pageId="2" pageNumber="163">nucleata</emphasis>
|
||
<bibRefCitation id="EF874B060E58B14AFE1EF9CFFD84F9E8" box="[444,575,1599,1624]" pageId="2" pageNumber="163" refId="ref5628" refString="Loof, P. A. A. (1968) Taxonomy of Hemicycliophora species from west and central Europe (Nematoda: Criconematoidea). Mededelingen Landbouwhogeschool Wageningen, 68, 1 - 43." type="journal article">Loof, 1968</bibRefCitation>
|
||
</taxonomicName>
|
||
,
|
||
<taxonomicName id="4C164D740E58B14AFDECF9B0FCDEF9E8" authority="Thorne, 1955" authorityName="Thorne" authorityYear="1955" box="[590,869,1599,1624]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="2" pageNumber="163" phylum="Nematoda" rank="species" species="similis">
|
||
<emphasis id="B962EAE50E58B14AFDECF9B0FD06F9E7" box="[590,701,1599,1623]" italics="true" pageId="2" pageNumber="163">H. similis</emphasis>
|
||
<bibRefCitation id="EF874B060E58B14AFD6AF9CFFCDEF9E8" box="[712,869,1599,1624]" pageId="2" pageNumber="163" refId="ref6401" refString="Thorne, G. (1955) Fifteen new species of the genus Hemicycliophora with an amended description of H. typical de Man (Tylenchida Criconematidae). Proceedings of the" type="proceedings paper">Thorne, 1955</bibRefCitation>
|
||
</taxonomicName>
|
||
,
|
||
<taxonomicName id="4C164D740E58B14AFCD6F9B0FB44F9E8" authority="Reed & Jenkins, 1963" authorityName="Reed & Jenkins" authorityYear="1963" box="[884,1279,1599,1624]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="2" pageNumber="163" phylum="Nematoda" rank="species" species="vaccinii">
|
||
<emphasis id="B962EAE50E58B14AFCD6F9B0FC49F9E7" box="[884,1010,1600,1623]" italics="true" pageId="2" pageNumber="163">H. vaccinii</emphasis>
|
||
<bibRefCitation id="EF874B060E58B14AFC5FF9CFFB44F9E8" box="[1021,1279,1599,1624]" pageId="2" pageNumber="163" refId="ref6003" refString="Reed, J. P. & Jenkins, W. R. (1963) Hemicycliophora vaccinium n. sp. (Nematoda: Criconematidae) from cranberry. Proceedings of the Helminthological Society of Washington, 30, 211 - 212." type="journal article">Reed & Jenkins, 1963</bibRefCitation>
|
||
</taxonomicName>
|
||
because new species share similar tail shape (elongate conoid, tapering gradually to a distal finely conoid terminus or slightly offset spike with a narrowly rounded terminus, and tail annuli are distinct until terminus except terminal annuli become irregular), cuticle ornamentation (consists of few breaks, irregularities and anastomosis) and general morphology (slightly ventrally arcuate, cuticle attached at lip region and the terminal end of body with spike-like projection) with these five species. However, together with above-mentioned characters, longer stylet length and posteriorly located vulva make this species unique among rest of
|
||
<taxonomicName id="4C164D740E58B14AFCD7F8E7FB8CF89F" authorityName="de Man" authorityYear="1921" box="[885,1079,1815,1839]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="2" pageNumber="163" phylum="Nematoda" rank="genus">
|
||
<emphasis id="B962EAE50E58B14AFCD7F8E7FB8CF89F" box="[885,1079,1815,1839]" italics="true" pageId="2" pageNumber="163">Hemicycliophora</emphasis>
|
||
</taxonomicName>
|
||
species. It can be differentiated from
|
||
<taxonomicName id="4C164D740E58B14AFF76F8CCFEE0F8E3" authorityName="Doucet" authorityYear="1982" box="[212,347,1851,1875]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="2" pageNumber="163" phylum="Nematoda" rank="species" species="filicauda">
|
||
<emphasis id="B962EAE50E58B14AFF76F8CCFEE0F8E3" box="[212,347,1851,1875]" italics="true" pageId="2" pageNumber="163">H. filicauda</emphasis>
|
||
</taxonomicName>
|
||
by more body annuli, R= 275 (255–297)
|
||
<emphasis id="B962EAE50E58B14AFC90F8CCFCF2F8E3" box="[818,841,1852,1875]" italics="true" pageId="2" pageNumber="163">vs</emphasis>
|
||
. 262 (246–274), longer stylet, 118 (108–125.)
|
||
<emphasis id="B962EAE50E58B14AFAF8F8CCFACAF8E3" box="[1370,1393,1852,1875]" italics="true" pageId="2" pageNumber="163">vs</emphasis>
|
||
. 85 (80–90) µm, higher V, 91 (90–93)
|
||
<emphasis id="B962EAE50E58B14AFD83F890FD83F8C7" box="[545,568,1888,1911]" italics="true" pageId="2" pageNumber="163">vs</emphasis>
|
||
. 82.5 (82–83), higher number of annuli from anterior end to excretory pore, Rex, 60 (54–66)
|
||
<emphasis id="B962EAE50E58B14AFEF4F874FED6F82B" box="[342,365,1924,1947]" italics="true" pageId="2" pageNumber="163">vs</emphasis>
|
||
. 44 (43–460), lower Ran, 28 (24–25)
|
||
<emphasis id="B962EAE50E58B14AFCBFF874FC8FF82B" box="[797,820,1924,1947]" italics="true" pageId="2" pageNumber="163">vs</emphasis>
|
||
. 59 (53–60), lower VL/VB, 2.5 (2.0–2.9)
|
||
<emphasis id="B962EAE50E58B14AFAB3F874FA93F82B" box="[1297,1320,1924,1947]" italics="true" pageId="2" pageNumber="163">vs</emphasis>
|
||
. 5.1 (4.7– 5.2) and shorter tail, 94 (76–111)
|
||
<emphasis id="B962EAE50E58B14AFDACF858FD9EF80F" box="[526,549,1960,1983]" italics="true" pageId="2" pageNumber="163">vs</emphasis>
|
||
. 142 (132–147) µm.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<caption id="DF69667F0E59B14BFF35FF68FED7FF7F" pageId="3" pageNumber="164">
|
||
<paragraph id="8BA936F70E59B14BFF35FF68FED7FF7F" blockId="3.[151,1437,151,207]" pageId="3" pageNumber="164">
|
||
<emphasis id="B962EAE50E59B14BFF35FF68FEB7FF1F" bold="true" box="[151,268,152,175]" pageId="3" pageNumber="164">TABLE 1.</emphasis>
|
||
Morphometrics of
|
||
<taxonomicName id="4C164D740E59B14BFE42FF67FCBEFF1F" authority="Maria & Cai & Qu & Castillo & Zheng, 2018" authorityName="Maria & Cai & Qu & Castillo & Zheng" authorityYear="2018" box="[480,773,151,175]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="3" pageNumber="164" phylum="Nematoda" rank="species" species="subbotini" status="sp. nov.">
|
||
<emphasis id="B962EAE50E59B14BFE42FF67FCBEFF1F" box="[480,773,151,175]" italics="true" pageId="3" pageNumber="164">Hemicycliophora subbotini</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="A251579E0E59B14BFCACFF68FCF7FF1F" box="[782,844,152,175]" pageId="3" pageNumber="164" rank="species">
|
||
<emphasis id="B962EAE50E59B14BFCACFF68FCF7FF1F" bold="true" box="[782,844,152,175]" pageId="3" pageNumber="164">n. sp.</emphasis>
|
||
</taxonomicNameLabel>
|
||
female. All measurements are in
|
||
<emphasis id="B962EAE50E59B14BFB1CFF68FB76FF1F" box="[1214,1229,152,175]" italics="true" pageId="3" pageNumber="164">µ</emphasis>
|
||
m and in the form: mean ± s.d. (range).
|
||
</paragraph>
|
||
</caption>
|
||
<paragraph id="8BA936F70E59B14BFF3DFF1AFBDEFAEC" pageId="3" pageNumber="164">
|
||
<table id="F916C4570E594EB7FF3DFF1AFB3CFAEC" box="[159,1159,234,1372]" gridcols="3" gridrows="28" pageId="3" pageNumber="164">
|
||
<tr id="352634B50E594EB7FF3DFF1AFB3CFEB0" box="[159,1159,234,256]" gridrow="0" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFF1AFDF7FEB0" box="[159,588,234,256]" gridcol="0" gridrow="0" pageId="3" pageNumber="164">Characters/Ratio</th>
|
||
<th id="76F75DC90E594EB7FD50FF1AFCEBFEB0" box="[754,848,234,256]" gridcol="1" gridrow="0" pageId="3" pageNumber="164">Holotype</th>
|
||
<th id="76F75DC90E594EB7FC06FF1AFB3CFEB0" box="[932,1159,234,256]" gridcol="2" gridrow="0" pageId="3" pageNumber="164">Paratype</th>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFEE4FB3CFE9A" box="[159,1159,276,298]" gridrow="1" pageId="3" pageNumber="164" rowspan-1="1">
|
||
<th id="76F75DC90E594EB7FF3DFEE4FDF7FE9A" box="[159,588,276,298]" gridcol="0" gridrow="1" pageId="3" pageNumber="164">n</th>
|
||
<td id="76F75DC90E594EB7FC06FEE4FB3CFE9A" box="[932,1159,276,298]" gridcol="2" gridrow="1" pageId="3" pageNumber="164">14</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFECDFB3CFEE3" box="[159,1159,317,339]" gridrow="2" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFECDFDF7FEE3" box="[159,588,317,339]" gridcol="0" gridrow="2" pageId="3" pageNumber="164">L</th>
|
||
<td id="76F75DC90E594EB7FD50FECDFCEBFEE3" box="[754,848,317,339]" gridcol="1" gridrow="2" pageId="3" pageNumber="164">1050</td>
|
||
<td id="76F75DC90E594EB7FC06FECDFB3CFEE3" box="[932,1159,317,339]" gridcol="2" gridrow="2" pageId="3" pageNumber="164">1056± 98 (895–1218)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFE96FB3CFECC" box="[159,1159,358,380]" gridrow="3" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFE96FDF7FECC" box="[159,588,358,380]" gridcol="0" gridrow="3" pageId="3" pageNumber="164">a</th>
|
||
<td id="76F75DC90E594EB7FD50FE96FCEBFECC" box="[754,848,358,380]" gridcol="1" gridrow="3" pageId="3" pageNumber="164">22.0</td>
|
||
<td id="76F75DC90E594EB7FC06FE96FB3CFECC" box="[932,1159,358,380]" gridcol="2" gridrow="3" pageId="3" pageNumber="164">21.7 ± 1.4 (18.9–23.7)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFE60FB3CFE16" box="[159,1159,400,422]" gridrow="4" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFE60FDF7FE16" box="[159,588,400,422]" gridcol="0" gridrow="4" pageId="3" pageNumber="164">b</th>
|
||
<td id="76F75DC90E594EB7FD50FE60FCEBFE16" box="[754,848,400,422]" gridcol="1" gridrow="4" pageId="3" pageNumber="164">5.0</td>
|
||
<td id="76F75DC90E594EB7FC06FE60FB3CFE16" box="[932,1159,400,422]" gridcol="2" gridrow="4" pageId="3" pageNumber="164">5.2 ± 0.3 (4.7–6.0)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFE49FB3CFE7F" box="[159,1159,441,463]" gridrow="5" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFE49FDF7FE7F" box="[159,588,441,463]" gridcol="0" gridrow="5" pageId="3" pageNumber="164">c</th>
|
||
<td id="76F75DC90E594EB7FD50FE49FCEBFE7F" box="[754,848,441,463]" gridcol="1" gridrow="5" pageId="3" pageNumber="164">11.3</td>
|
||
<td id="76F75DC90E594EB7FC06FE49FB3CFE7F" box="[932,1159,441,463]" gridcol="2" gridrow="5" pageId="3" pageNumber="164">11.3 ± 0.6 (10.4–12.6)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFE12FB3CFE48" box="[159,1159,482,504]" gridrow="6" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFE12FDF7FE48" box="[159,588,482,504]" gridcol="0" gridrow="6" pageId="3" pageNumber="164">c'</th>
|
||
<td id="76F75DC90E594EB7FD50FE12FCEBFE48" box="[754,848,482,504]" gridcol="1" gridrow="6" pageId="3" pageNumber="164">2.5</td>
|
||
<td id="76F75DC90E594EB7FC06FE12FB3CFE48" box="[932,1159,482,504]" gridcol="2" gridrow="6" pageId="3" pageNumber="164">2.4 ± 0.3 (2.1–3.1)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFDFCFB3CFD92" box="[159,1159,524,546]" gridrow="7" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFDFCFDF7FD92" box="[159,588,524,546]" gridcol="0" gridrow="7" pageId="3" pageNumber="164">V</th>
|
||
<td id="76F75DC90E594EB7FD50FDFCFCEBFD92" box="[754,848,524,546]" gridcol="1" gridrow="7" pageId="3" pageNumber="164">91</td>
|
||
<td id="76F75DC90E594EB7FC06FDFCFB3CFD92" box="[932,1159,524,546]" gridcol="2" gridrow="7" pageId="3" pageNumber="164">91 ± 0.6 (90–93)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFDC5FB3CFDFB" box="[159,1159,565,587]" gridrow="8" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFDC5FDF7FDFB" box="[159,588,565,587]" gridcol="0" gridrow="8" pageId="3" pageNumber="164">VL/VB</th>
|
||
<td id="76F75DC90E594EB7FD50FDC5FCEBFDFB" box="[754,848,565,587]" gridcol="1" gridrow="8" pageId="3" pageNumber="164">2.9</td>
|
||
<td id="76F75DC90E594EB7FC06FDC5FB3CFDFB" box="[932,1159,565,587]" gridcol="2" gridrow="8" pageId="3" pageNumber="164">2.5 ± 0.2 (2.0–2.9)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFDAEFB3CFDC4" box="[159,1159,606,628]" gridrow="9" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFDAEFDF7FDC4" box="[159,588,606,628]" gridcol="0" gridrow="9" pageId="3" pageNumber="164">R</th>
|
||
<td id="76F75DC90E594EB7FD50FDAEFCEBFDC4" box="[754,848,606,628]" gridcol="1" gridrow="9" pageId="3" pageNumber="164">268</td>
|
||
<td id="76F75DC90E594EB7FC06FDAEFB3CFDC4" box="[932,1159,606,628]" gridcol="2" gridrow="9" pageId="3" pageNumber="164">275 ± 12.7 (255–297)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFD78FB3CFD2E" box="[159,1159,648,670]" gridrow="10" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFD78FDF7FD2E" box="[159,588,648,670]" gridcol="0" gridrow="10" pageId="3" pageNumber="164">Rex</th>
|
||
<td id="76F75DC90E594EB7FD50FD78FCEBFD2E" box="[754,848,648,670]" gridcol="1" gridrow="10" pageId="3" pageNumber="164">57</td>
|
||
<td id="76F75DC90E594EB7FC06FD78FB3CFD2E" box="[932,1159,648,670]" gridcol="2" gridrow="10" pageId="3" pageNumber="164">60.0 ± 4.2 (54–66)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFD41FB3CFD77" box="[159,1159,689,711]" gridrow="11" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFD41FDF7FD77" box="[159,588,689,711]" gridcol="0" gridrow="11" pageId="3" pageNumber="164">RV</th>
|
||
<td id="76F75DC90E594EB7FD50FD41FCEBFD77" box="[754,848,689,711]" gridcol="1" gridrow="11" pageId="3" pageNumber="164">43</td>
|
||
<td id="76F75DC90E594EB7FC06FD41FB3CFD77" box="[932,1159,689,711]" gridcol="2" gridrow="11" pageId="3" pageNumber="164">46.0 ± 3.5 (42–53)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFD2AFB3CFD40" box="[159,1159,730,752]" gridrow="12" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFD2AFDF7FD40" box="[159,588,730,752]" gridcol="0" gridrow="12" pageId="3" pageNumber="164">RVan</th>
|
||
<td id="76F75DC90E594EB7FD50FD2AFCEBFD40" box="[754,848,730,752]" gridcol="1" gridrow="12" pageId="3" pageNumber="164">18</td>
|
||
<td id="76F75DC90E594EB7FC06FD2AFB3CFD40" box="[932,1159,730,752]" gridcol="2" gridrow="12" pageId="3" pageNumber="164">18.0 ± 1.9 (15–22)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFCF4FB3CFCAA" box="[159,1159,772,794]" gridrow="13" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFCF4FDF7FCAA" box="[159,588,772,794]" gridcol="0" gridrow="13" pageId="3" pageNumber="164">Ran</th>
|
||
<td id="76F75DC90E594EB7FD50FCF4FCEBFCAA" box="[754,848,772,794]" gridcol="1" gridrow="13" pageId="3" pageNumber="164">25</td>
|
||
<td id="76F75DC90E594EB7FC06FCF4FB3CFCAA" box="[932,1159,772,794]" gridcol="2" gridrow="13" pageId="3" pageNumber="164">28.0 ± 3.0 (24–35)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFCDDFB3CFCF3" box="[159,1159,813,835]" gridrow="14" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFCDDFDF7FCF3" box="[159,588,813,835]" gridcol="0" gridrow="14" pageId="3" pageNumber="164">Lip height</th>
|
||
<td id="76F75DC90E594EB7FD50FCDDFCEBFCF3" box="[754,848,813,835]" gridcol="1" gridrow="14" pageId="3" pageNumber="164">8.3</td>
|
||
<td id="76F75DC90E594EB7FC06FCDDFB3CFCF3" box="[932,1159,813,835]" gridcol="2" gridrow="14" pageId="3" pageNumber="164">8.6 ± 0.9 (7.0–10.5)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFCA6FB3CFCDC" box="[159,1159,854,876]" gridrow="15" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFCA6FDF7FCDC" box="[159,588,854,876]" gridcol="0" gridrow="15" pageId="3" pageNumber="164">Lip diam.</th>
|
||
<td id="76F75DC90E594EB7FD50FCA6FCEBFCDC" box="[754,848,854,876]" gridcol="1" gridrow="15" pageId="3" pageNumber="164">19.9</td>
|
||
<td id="76F75DC90E594EB7FC06FCA6FB3CFCDC" box="[932,1159,854,876]" gridcol="2" gridrow="15" pageId="3" pageNumber="164">19.5 ± 1.2 (17.5–22.0)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFC70FB3CFC26" box="[159,1159,896,918]" gridrow="16" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFC70FDF7FC26" box="[159,588,896,918]" gridcol="0" gridrow="16" pageId="3" pageNumber="164">Stylet</th>
|
||
<td id="76F75DC90E594EB7FD50FC70FCEBFC26" box="[754,848,896,918]" gridcol="1" gridrow="16" pageId="3" pageNumber="164">118</td>
|
||
<td id="76F75DC90E594EB7FC06FC70FB3CFC26" box="[932,1159,896,918]" gridcol="2" gridrow="16" pageId="3" pageNumber="164">118 ± 5.2 (108–125)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFC59FB3CFC0F" box="[159,1159,937,959]" gridrow="17" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFC59FDF7FC0F" box="[159,588,937,959]" gridcol="0" gridrow="17" pageId="3" pageNumber="164">Conus length</th>
|
||
<td id="76F75DC90E594EB7FD50FC59FCEBFC0F" box="[754,848,937,959]" gridcol="1" gridrow="17" pageId="3" pageNumber="164">96</td>
|
||
<td id="76F75DC90E594EB7FC06FC59FB3CFC0F" box="[932,1159,937,959]" gridcol="2" gridrow="17" pageId="3" pageNumber="164">98 ±4.4 (89–107)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFC22FB3CFC58" box="[159,1159,978,1000]" gridrow="18" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFC22FDF7FC58" box="[159,588,978,1000]" gridcol="0" gridrow="18" pageId="3" pageNumber="164">M</th>
|
||
<td id="76F75DC90E594EB7FD50FC22FCEBFC58" box="[754,848,978,1000]" gridcol="1" gridrow="18" pageId="3" pageNumber="164">81</td>
|
||
<td id="76F75DC90E594EB7FC06FC22FB3CFC58" box="[932,1159,978,1000]" gridcol="2" gridrow="18" pageId="3" pageNumber="164">83 ±1.2 (81–85)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFC0CFB3CFBA2" box="[159,1159,1020,1042]" gridrow="19" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFC0CFDF7FBA2" box="[159,588,1020,1042]" gridcol="0" gridrow="19" pageId="3" pageNumber="164">Pharynx length</th>
|
||
<td id="76F75DC90E594EB7FD50FC0CFCEBFBA2" box="[754,848,1020,1042]" gridcol="1" gridrow="19" pageId="3" pageNumber="164">211</td>
|
||
<td id="76F75DC90E594EB7FC06FC0CFB3CFBA2" box="[932,1159,1020,1042]" gridcol="2" gridrow="19" pageId="3" pageNumber="164">203 ± 9.4 (190–223)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFBD5FB3CFB8B" box="[159,1159,1061,1083]" gridrow="20" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFBD5FDF7FB8B" box="[159,588,1061,1083]" gridcol="0" gridrow="20" pageId="3" pageNumber="164">Max body diam.</th>
|
||
<td id="76F75DC90E594EB7FD50FBD5FCEBFB8B" box="[754,848,1061,1083]" gridcol="1" gridrow="20" pageId="3" pageNumber="164">48</td>
|
||
<td id="76F75DC90E594EB7FC06FBD5FB3CFB8B" box="[932,1159,1061,1083]" gridcol="2" gridrow="20" pageId="3" pageNumber="164">49 ± 3.7 (43–55)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFBBEFB3CFBD4" box="[159,1159,1102,1124]" gridrow="21" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFBBEFDF7FBD4" box="[159,588,1102,1124]" gridcol="0" gridrow="21" pageId="3" pageNumber="164">Vulva body diam. inside sheath</th>
|
||
<td id="76F75DC90E594EB7FD50FBBEFCEBFBD4" box="[754,848,1102,1124]" gridcol="1" gridrow="21" pageId="3" pageNumber="164">32</td>
|
||
<td id="76F75DC90E594EB7FC06FBBEFB3CFBD4" box="[932,1159,1102,1124]" gridcol="2" gridrow="21" pageId="3" pageNumber="164">37 ± 4.9 (32 –45)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFB88FB3CFB3E" box="[159,1159,1144,1166]" gridrow="22" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFB88FDF7FB3E" box="[159,588,1144,1166]" gridcol="0" gridrow="22" pageId="3" pageNumber="164">vulva body diam. outside including sheath</th>
|
||
<td id="76F75DC90E594EB7FD50FB88FCEBFB3E" box="[754,848,1144,1166]" gridcol="1" gridrow="22" pageId="3" pageNumber="164">40</td>
|
||
<td id="76F75DC90E594EB7FC06FB88FB3CFB3E" box="[932,1159,1144,1166]" gridcol="2" gridrow="22" pageId="3" pageNumber="164">43 ± 4.8 (36–51)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFB51FB3CFB07" box="[159,1159,1185,1207]" gridrow="23" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFB51FDF7FB07" box="[159,588,1185,1207]" gridcol="0" gridrow="23" pageId="3" pageNumber="164">Distance from vulva to tail term.</th>
|
||
<td id="76F75DC90E594EB7FD50FB51FCEBFB07" box="[754,848,1185,1207]" gridcol="1" gridrow="23" pageId="3" pageNumber="164">92</td>
|
||
<td id="76F75DC90E594EB7FC06FB51FB3CFB07" box="[932,1159,1185,1207]" gridcol="2" gridrow="23" pageId="3" pageNumber="164">93 ± 12.1 (70–118)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFB3AFB3CFB50" box="[159,1159,1226,1248]" gridrow="24" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFB3AFDF7FB50" box="[159,588,1226,1248]" gridcol="0" gridrow="24" pageId="3" pageNumber="164">Anal body diam. inside sheath</th>
|
||
<td id="76F75DC90E594EB7FD50FB3AFCEBFB50" box="[754,848,1226,1248]" gridcol="1" gridrow="24" pageId="3" pageNumber="164">27.5</td>
|
||
<td id="76F75DC90E594EB7FC06FB3AFB3CFB50" box="[932,1159,1226,1248]" gridcol="2" gridrow="24" pageId="3" pageNumber="164">28.5 ± 3.1 (25.5–35.5)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFB04FB3CFABA" box="[159,1159,1268,1290]" gridrow="25" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFB04FDF7FABA" box="[159,588,1268,1290]" gridcol="0" gridrow="25" pageId="3" pageNumber="164">Anal body diam. including sheath</th>
|
||
<td id="76F75DC90E594EB7FD50FB04FCEBFABA" box="[754,848,1268,1290]" gridcol="1" gridrow="25" pageId="3" pageNumber="164">37</td>
|
||
<td id="76F75DC90E594EB7FC06FB04FB3CFABA" box="[932,1159,1268,1290]" gridcol="2" gridrow="25" pageId="3" pageNumber="164">39 ± 4.9 (29–50)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFAEDFB3CFA83" box="[159,1159,1309,1331]" gridrow="26" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFAEDFDF7FA83" box="[159,588,1309,1331]" gridcol="0" gridrow="26" pageId="3" pageNumber="164">Tail length inside sheath</th>
|
||
<td id="76F75DC90E594EB7FD50FAEDFCEBFA83" box="[754,848,1309,1331]" gridcol="1" gridrow="26" pageId="3" pageNumber="164">74</td>
|
||
<td id="76F75DC90E594EB7FC06FAEDFB3CFA83" box="[932,1159,1309,1331]" gridcol="2" gridrow="26" pageId="3" pageNumber="164">77 ± 8.4 (67–95)</td>
|
||
</tr>
|
||
<tr id="352634B50E594EB7FF3DFAB6FB3CFAEC" box="[159,1159,1350,1372]" gridrow="27" pageId="3" pageNumber="164">
|
||
<th id="76F75DC90E594EB7FF3DFAB6FDF7FAEC" box="[159,588,1350,1372]" gridcol="0" gridrow="27" pageId="3" pageNumber="164">Tail length including outer sheath</th>
|
||
<td id="76F75DC90E594EB7FD50FAB6FCEBFAEC" box="[754,848,1350,1372]" gridcol="1" gridrow="27" pageId="3" pageNumber="164">93</td>
|
||
<td id="76F75DC90E594EB7FC06FAB6FB3CFAEC" box="[932,1159,1350,1372]" gridcol="2" gridrow="27" pageId="3" pageNumber="164">94 ± 10.5 (76–111)</td>
|
||
</tr>
|
||
</table>
|
||
</paragraph>
|
||
<subSubSection id="C30C657C0E59B14BFF65FA6EFE94F862" pageId="3" pageNumber="164" type="description">
|
||
<paragraph id="8BA936F70E59B14BFF65FA6EFEECF992" blockId="3.[151,1437,1437,2002]" pageId="3" pageNumber="164">
|
||
From
|
||
<taxonomicName id="4C164D740E59B14BFEADFA6EFE3FFA05" authorityName="Jenkins & Reed" authorityYear="1964" box="[271,388,1437,1461]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="3" pageNumber="164" phylum="Nematoda" rank="species" species="metleri">
|
||
<emphasis id="B962EAE50E59B14BFEADFA6EFE3FFA05" box="[271,388,1437,1461]" italics="true" pageId="3" pageNumber="164">H. metleri</emphasis>
|
||
</taxonomicName>
|
||
, differs by the shape of lip region (conoid with narrow ovate oral disc
|
||
<emphasis id="B962EAE50E59B14BFB79FA6EFB49FA05" box="[1243,1266,1438,1461]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. truncate with rectangular oral disc), slenderer body, a = 21.7 (18.9–23.7)
|
||
<emphasis id="B962EAE50E59B14BFC8CFA32FCFEFA69" box="[814,837,1474,1497]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 28.3 (23–38), lower R, 275 (255–297)
|
||
<emphasis id="B962EAE50E59B14BFAA7FA32FAA7FA69" box="[1285,1308,1474,1497]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 414 (385– 2455), shorter stylet, 118 (108–125)
|
||
<emphasis id="B962EAE50E59B14BFD97FA16FDF7FA4D" box="[565,588,1510,1533]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 143 (122–158) µm, higher V, 91 (90–93)
|
||
<emphasis id="B962EAE50E59B14BFB92FA16FBFCFA4D" box="[1072,1095,1510,1533]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 85 (83–87), and lower RVan, 15–22
|
||
<emphasis id="B962EAE50E59B14BFF46F9FAFF40F991" box="[228,251,1546,1569]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 24–36.
|
||
</paragraph>
|
||
<paragraph id="8BA936F70E59B14BFF65F9DEFCE8F902" blockId="3.[151,1437,1437,2002]" pageId="3" pageNumber="164">
|
||
From
|
||
<taxonomicName id="4C164D740E59B14BFEAFF9DEFE29F9F5" authorityName="Loof" authorityYear="1968" box="[269,402,1581,1605]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="3" pageNumber="164" phylum="Nematoda" rank="species" species="nucleata">
|
||
<emphasis id="B962EAE50E59B14BFEAFF9DEFE29F9F5" box="[269,402,1581,1605]" italics="true" pageId="3" pageNumber="164">H. nucleata</emphasis>
|
||
</taxonomicName>
|
||
differs by shorter body length 1057 (896–1218)
|
||
<emphasis id="B962EAE50E59B14BFC69F9DEFC59F9F5" box="[971,994,1582,1605]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 1450 (1240–1550) µm, lower R, 275 (255–297)
|
||
<emphasis id="B962EAE50E59B14BFEB6F9A2FE90F9D9" box="[276,299,1618,1641]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 347 (320–373), slenderer body, a = 21.7 (18.9–23.7)
|
||
<emphasis id="B962EAE50E59B14BFC36F9A2FC10F9D9" box="[916,939,1618,1641]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 33 (30–38), lower c' =2.4 (2.1–3.1)
|
||
<emphasis id="B962EAE50E59B14BFAF0F9A2FAD2F9D9" box="[1362,1385,1618,1641]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 4.4 (3.3–5.5), shorter stylet, 118 (108–125)
|
||
<emphasis id="B962EAE50E59B14BFDF9F986FDC9F93D" box="[603,626,1654,1677]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 138 (130–150) µm, higher V, 91 (90–93)
|
||
<emphasis id="B962EAE50E59B14BFBF5F986FBD5F93D" box="[1111,1134,1654,1677]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 82 (79–85), lower RV, 46 (42–53) vs. 83 (62–92), lower Ran, 28 (24–25)
|
||
<emphasis id="B962EAE50E59B14BFD09F96AFD79F901" box="[683,706,1690,1713]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 57 (48–64).
|
||
</paragraph>
|
||
<paragraph id="8BA936F70E59B14BFF65F94EFD40F8AE" blockId="3.[151,1437,1437,2002]" pageId="3" pageNumber="164">
|
||
From
|
||
<taxonomicName id="4C164D740E59B14BFEA9F94EFECCF965" authorityName="Thorne" authorityYear="1955" box="[267,375,1725,1749]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="3" pageNumber="164" phylum="Nematoda" rank="species" species="similis">
|
||
<emphasis id="B962EAE50E59B14BFEA9F94EFECCF965" box="[267,375,1725,1749]" italics="true" pageId="3" pageNumber="164">H. similis</emphasis>
|
||
</taxonomicName>
|
||
(after Subbotin
|
||
<emphasis id="B962EAE50E59B14BFD92F94EFDD9F965" box="[560,610,1725,1749]" italics="true" pageId="3" pageNumber="164">et al</emphasis>
|
||
., 2014) differs by longer stylet length, 118 (108–125)
|
||
<emphasis id="B962EAE50E59B14BFB6BF94EFB5BF965" box="[1225,1248,1726,1749]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 100.3 (91–108) µm, higher V, 91 (90–93)
|
||
<emphasis id="B962EAE50E59B14BFE19F912FE69F949" box="[443,466,1762,1785]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 79.8 (78–81), lower RV, 46 (42–53)
|
||
<emphasis id="B962EAE50E59B14BFCD8F912FC2AF949" box="[890,913,1762,1785]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 64.4 (57–70), lower Ran, 28 (24–25)
|
||
<emphasis id="B962EAE50E59B14BFAE7F912FAE7F949" box="[1349,1372,1762,1785]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 42.8 (36–51), lower VL/VB, 2.5 (2.0–2.9)
|
||
<emphasis id="B962EAE50E59B14BFD9CF8F6FDEEF8AD" box="[574,597,1798,1821]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 5.9 (4.8–7.6).
|
||
</paragraph>
|
||
<paragraph id="8BA936F70E59B14BFF65F8DAFE94F862" blockId="3.[151,1437,1437,2002]" pageId="3" pageNumber="164">
|
||
From
|
||
<taxonomicName id="4C164D740E59B14BFEA9F8DAFE3DF8F1" authorityName="Reed & Jenkins" authorityYear="1963" box="[267,390,1834,1857]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="3" pageNumber="164" phylum="Nematoda" rank="species" species="vaccinii">
|
||
<emphasis id="B962EAE50E59B14BFEA9F8DAFE3DF8F1" box="[267,390,1834,1857]" italics="true" pageId="3" pageNumber="164">H. vaccinii</emphasis>
|
||
</taxonomicName>
|
||
differs by slenderer body, a = 21.7 (18.9–23.7)
|
||
<emphasis id="B962EAE50E59B14BFC03F8DAFC03F8F1" box="[929,952,1834,1857]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 30.1 (25.6–35.3), longer stylet, 118 (108– 125)
|
||
<emphasis id="B962EAE50E59B14BFF71F8BEFF51F8D5" box="[211,234,1870,1893]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 102 (95–112) µm, higher V, 91 (90–93)
|
||
<emphasis id="B962EAE50E59B14BFD6AF8BEFD64F8D5" box="[712,735,1870,1893]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 76.7 (74.7–80.4), lower c' =11.3 (10.4–12.6)
|
||
<emphasis id="B962EAE50E59B14BFB51F8BEFAB1F8D5" box="[1267,1290,1870,1893]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 15.6 (14.9– 16.7), lower RVan (15–22
|
||
<emphasis id="B962EAE50E59B14BFE1CF882FE6EF839" box="[446,469,1906,1929]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 30–35), longer tail (after Subbotin
|
||
<emphasis id="B962EAE50E59B14BFCCBF882FC22F839" box="[873,921,1905,1929]" italics="true" pageId="3" pageNumber="164">et al</emphasis>
|
||
., 2014) 94 (76–111)
|
||
<emphasis id="B962EAE50E59B14BFB2EF882FB18F839" box="[1164,1187,1906,1929]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 116.5 (113–121) µm, lower R, 275 (255–297)
|
||
<emphasis id="B962EAE50E59B14BFE11F866FE71F81D" box="[435,458,1942,1965]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 304.5 (273–339), lower RV, 46 (42–53)
|
||
<emphasis id="B962EAE50E59B14BFC05F866FC05F81D" box="[935,958,1942,1965]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 73.3 (70–76), lower Ran, 28 (24–25)
|
||
<emphasis id="B962EAE50E59B14BFADFF866FA2FF81D" box="[1405,1428,1942,1965]" italics="true" pageId="3" pageNumber="164">vs</emphasis>
|
||
. 49.6 (46–52).
|
||
</paragraph>
|
||
</subSubSection>
|
||
<caption id="DF69667F0E5EB14CFF35F870FDC8F842" httpUri="https://zenodo.org/record/1287793/files/figure.png" pageId="4" pageNumber="165" startId="4.[151,250,1920,1942]" targetBox="[207,1404,212,1890]" targetPageId="4">
|
||
<paragraph id="8BA936F70E5EB14CFF35F870FDC8F842" blockId="4.[151,1437,1920,2034]" pageId="4" pageNumber="165">
|
||
<emphasis id="B962EAE50E5EB14CFF35F870FEA9F825" bold="true" box="[151,274,1920,1942]" pageId="4" pageNumber="165">FIGURE 1.</emphasis>
|
||
Line drawings of
|
||
<taxonomicName id="4C164D740E5EB14CFE68F870FD65F826" authority="Maria & Cai & Qu & Castillo & Zheng, 2018" authorityName="Maria & Cai & Qu & Castillo & Zheng" authorityYear="2018" box="[458,734,1920,1942]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="4" pageNumber="165" phylum="Nematoda" rank="species" species="subbotini" status="sp. nov.">
|
||
<emphasis id="B962EAE50E5EB14CFE68F870FD65F826" box="[458,734,1920,1942]" italics="true" pageId="4" pageNumber="165">Hemicycliophora subbotini</emphasis>
|
||
</taxonomicName>
|
||
<emphasis id="B962EAE50E5EB14CFD46F870FCA6F825" bold="true" box="[740,797,1920,1941]" pageId="4" pageNumber="165">
|
||
<taxonomicNameLabel id="A251579E0E5EB14CFD46F870FCA6F825" box="[740,797,1920,1941]" pageId="4" pageNumber="165" rank="species">n. sp.</taxonomicNameLabel>
|
||
</emphasis>
|
||
Female. A: Pharyngeal region; B–D: Various lip regions; E–G:
|
||
<emphasis id="B962EAE50E5EB14CFF35F850FF5EF804" box="[151,229,1950,1973]" italics="true" pageId="4" pageNumber="165">En face</emphasis>
|
||
view of lip region; H: SEM Vulval region; I: SEM Lateral field; J: Reproductive system; K, L: Vulval region; M, N: Stylet basal knobs; M: SEM Posterior region showing vulva and anus; P–R: Female tails. (Scale bars: A = 20
|
||
<emphasis id="B962EAE50E5EB14CFB5DF84EFAB0F863" box="[1279,1291,1982,2003]" italics="true" pageId="4" pageNumber="165">µ</emphasis>
|
||
m, B–D, E–G, K–N, P–R = 10
|
||
<emphasis id="B962EAE50E5EB14CFE99F82DFEFCF842" box="[315,327,2013,2034]" italics="true" pageId="4" pageNumber="165">µ</emphasis>
|
||
m, H, I = 30
|
||
<emphasis id="B962EAE50E5EB14CFE68F82DFE6DF842" box="[458,470,2013,2034]" italics="true" pageId="4" pageNumber="165">µ</emphasis>
|
||
m, O = 50
|
||
<emphasis id="B962EAE50E5EB14CFDE6F82DFDEBF842" box="[580,592,2013,2034]" italics="true" pageId="4" pageNumber="165">µ</emphasis>
|
||
m.)
|
||
</paragraph>
|
||
</caption>
|
||
<caption id="DF69667F0E5FB14DFF35F88BFD69F85D" httpUri="https://zenodo.org/record/1287795/files/figure.png" pageId="5" pageNumber="166" startId="5.[151,250,1915,1937]" targetBox="[193,1396,193,1886]" targetPageId="5">
|
||
<paragraph id="8BA936F70E5FB14DFF35F88BFD69F85D" blockId="5.[151,1437,1915,2029]" pageId="5" pageNumber="166">
|
||
<emphasis id="B962EAE50E5FB14DFF35F88BFEAEF820" bold="true" box="[151,277,1915,1937]" pageId="5" pageNumber="166">FIGURE 2.</emphasis>
|
||
Light photomicrographs of
|
||
<taxonomicName id="4C164D740E5FB14DFD99F88BFCEAF821" authority="Maria & Cai & Qu & Castillo & Zheng, 2018" authorityName="Maria & Cai & Qu & Castillo & Zheng" authorityYear="2018" box="[571,849,1915,1937]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="5" pageNumber="166" phylum="Nematoda" rank="species" species="subbotini" status="sp. nov.">
|
||
<emphasis id="B962EAE50E5FB14DFD99F88BFCEAF821" box="[571,849,1915,1937]" italics="true" pageId="5" pageNumber="166">Hemicycliophora subbotini</emphasis>
|
||
</taxonomicName>
|
||
<emphasis id="B962EAE50E5FB14DFCF8F88BFC2EF820" bold="true" box="[858,917,1915,1936]" pageId="5" pageNumber="166">
|
||
<taxonomicNameLabel id="A251579E0E5FB14DFCF8F88BFC2EF820" box="[858,917,1915,1936]" pageId="5" pageNumber="166" rank="species">n. sp.</taxonomicNameLabel>
|
||
</emphasis>
|
||
Female. A: Entire body; B, C Pharyngeal region, arrows showing position of base of pharyngeal bulb and excretory pore; D: Posterior region, arrows showing position of vulva and anus; E, F: Stylet basal knobs; G, H: Vulval regions; I: Lateral field; J–L: Female tails arrows showing position of anus. (Scale bars: A, D = 40
|
||
<emphasis id="B962EAE50E5FB14DFE22F828FE37F85D" box="[384,396,2008,2029]" italics="true" pageId="5" pageNumber="166">µ</emphasis>
|
||
m, B, C = 20
|
||
<emphasis id="B962EAE50E5FB14DFDB4F828FD99F85D" box="[534,546,2008,2029]" italics="true" pageId="5" pageNumber="166">µ</emphasis>
|
||
m, E–L= 10
|
||
<emphasis id="B962EAE50E5FB14DFD01F828FD0BF85D" box="[675,688,2008,2029]" italics="true" pageId="5" pageNumber="166">µ</emphasis>
|
||
m.)
|
||
</paragraph>
|
||
</caption>
|
||
<caption id="DF69667F0E5CB14EFF35F879FADBF86D" httpUri="https://zenodo.org/record/1287797/files/figure.png" pageId="6" pageNumber="167" startId="6.[151,250,1929,1951]" targetBox="[152,1432,234,1876]" targetPageId="6">
|
||
<paragraph id="8BA936F70E5CB14EFF35F879FADBF86D" blockId="6.[151,1436,1929,2013]" pageId="6" pageNumber="167">
|
||
<emphasis id="B962EAE50E5CB14EFF35F879FEA9F82E" bold="true" box="[151,274,1929,1951]" pageId="6" pageNumber="167">FIGURE 3.</emphasis>
|
||
Scanning electron micrographs of
|
||
<taxonomicName id="4C164D740E5CB14EFDD6F879FC3CF82F" authority="Maria & Cai & Qu & Castillo & Zheng, 2018" authorityName="Maria & Cai & Qu & Castillo & Zheng" authorityYear="2018" box="[628,903,1929,1951]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="6" pageNumber="167" phylum="Nematoda" rank="species" species="subbotini" status="sp. nov.">
|
||
<emphasis id="B962EAE50E5CB14EFDD6F879FC3CF82F" box="[628,903,1929,1951]" italics="true" pageId="6" pageNumber="167">Hemicycliophora subbotini</emphasis>
|
||
</taxonomicName>
|
||
<emphasis id="B962EAE50E5CB14EFC2FF87AFC7DF82F" bold="true" box="[909,966,1930,1951]" pageId="6" pageNumber="167">
|
||
<taxonomicNameLabel id="A251579E0E5CB14EFC2FF87AFC7DF82F" box="[909,966,1930,1951]" pageId="6" pageNumber="167" rank="species">n. sp.</taxonomicNameLabel>
|
||
</emphasis>
|
||
female. A: Entire body; B–D:
|
||
<emphasis id="B962EAE50E5CB14EFB5FF87AFAF2F82F" box="[1277,1353,1929,1951]" italics="true" pageId="6" pageNumber="167">En face</emphasis>
|
||
view of lip region; E: Vulval region; F, G: Posterior region, arrows showing position of vulva (v) and anus (a); H: Female tail arrow showing the position of anus I: Lateral field. (Scale bars: A = 250
|
||
<emphasis id="B962EAE50E5CB14EFC97F838FCF9F86D" box="[821,834,1992,2013]" italics="true" pageId="6" pageNumber="167">µ</emphasis>
|
||
m; B–D: 5
|
||
<emphasis id="B962EAE50E5CB14EFC16F838FC7AF86D" box="[948,961,1992,2013]" italics="true" pageId="6" pageNumber="167">µ</emphasis>
|
||
m; E = 15
|
||
<emphasis id="B962EAE50E5CB14EFB89F838FB8CF86D" box="[1067,1079,1992,2013]" italics="true" pageId="6" pageNumber="167">µ</emphasis>
|
||
m; F, G, I: 25
|
||
<emphasis id="B962EAE50E5CB14EFB61F838FB74F86D" box="[1219,1231,1992,2013]" italics="true" pageId="6" pageNumber="167">µ</emphasis>
|
||
m; H: 20
|
||
<emphasis id="B962EAE50E5CB14EFA92F838FA87F86D" box="[1328,1340,1992,2013]" italics="true" pageId="6" pageNumber="167">µ</emphasis>
|
||
m.)
|
||
</paragraph>
|
||
</caption>
|
||
<caption id="DF69667F0E5DB14FFF35F8F9FA8EF8CB" httpUri="https://zenodo.org/record/1287799/files/figure.png" pageId="7" pageNumber="168" startId="7.[151,250,1801,1823]" targetBox="[160,1428,199,1770]" targetPageId="7">
|
||
<paragraph id="8BA936F70E5DB14FFF35F8F9FA8EF8CB" blockId="7.[151,1436,1801,1915]" pageId="7" pageNumber="168">
|
||
<emphasis id="B962EAE50E5DB14FFF35F8F9FEAEF8AE" bold="true" box="[151,277,1801,1823]" pageId="7" pageNumber="168">FIGURE 4.</emphasis>
|
||
Phylogenetic relationships of
|
||
<taxonomicName id="4C164D740E5DB14FFDF7F8F9FCD7F8AF" authority="Maria & Cai & Qu & Castillo & Zheng, 2018" authorityName="Maria & Cai & Qu & Castillo & Zheng" authorityYear="2018" box="[597,876,1801,1823]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="7" pageNumber="168" phylum="Nematoda" rank="species" species="subbotini" status="sp. nov.">
|
||
<emphasis id="B962EAE50E5DB14FFDF7F8F9FCD7F8AF" box="[597,876,1801,1823]" italics="true" pageId="7" pageNumber="168">Hemicycliophora subbotini</emphasis>
|
||
</taxonomicName>
|
||
<emphasis id="B962EAE50E5DB14FFCD7F8F9FC0AF8AE" bold="true" box="[885,945,1801,1822]" pageId="7" pageNumber="168">
|
||
<taxonomicNameLabel id="A251579E0E5DB14FFCD7F8F9FC0AF8AE" box="[885,945,1801,1822]" pageId="7" pageNumber="168" rank="species">n. sp.</taxonomicNameLabel>
|
||
</emphasis>
|
||
Bayesian 50% majority rule consensus tree as inferred from D2 and D3 expansion segments of 28S rRNA sequence alignment under a transitional of invariable sites with invariable sites and a gamma-shaped distribution model (TIM3 + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. Scale bar = expected changes per site.
|
||
</paragraph>
|
||
</caption>
|
||
<caption id="DF69667F0E52B140FF35F870FC72F842" httpUri="https://zenodo.org/record/1287801/files/figure.png" pageId="8" pageNumber="169" startId="8.[151,250,1920,1942]" targetBox="[172,1415,195,1898]" targetPageId="8">
|
||
<paragraph id="8BA936F70E52B140FF35F870FC72F842" blockId="8.[151,1436,1920,2034]" pageId="8" pageNumber="169">
|
||
<emphasis id="B962EAE50E52B140FF35F870FEAEF825" bold="true" box="[151,277,1920,1942]" pageId="8" pageNumber="169">FIGURE 5.</emphasis>
|
||
Phylogenetic relationships of
|
||
<taxonomicName id="4C164D740E52B140FDF7F870FCD7F826" authority="Maria & Cai & Qu & Castillo & Zheng, 2018" authorityName="Maria & Cai & Qu & Castillo & Zheng" authorityYear="2018" box="[597,876,1920,1942]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="8" pageNumber="169" phylum="Nematoda" rank="species" species="subbotini" status="sp. nov.">
|
||
<emphasis id="B962EAE50E52B140FDF7F870FCD7F826" box="[597,876,1920,1942]" italics="true" pageId="8" pageNumber="169">Hemicycliophora subbotini</emphasis>
|
||
</taxonomicName>
|
||
<emphasis id="B962EAE50E52B140FCD7F870FC0AF825" bold="true" box="[885,945,1920,1941]" pageId="8" pageNumber="169">
|
||
<taxonomicNameLabel id="A251579E0E52B140FCD7F870FC0AF825" box="[885,945,1920,1941]" pageId="8" pageNumber="169" rank="species">n. sp.</taxonomicNameLabel>
|
||
</emphasis>
|
||
Bayesian 50% majority rule consensus tree as inferred from ITS rRNA sequence alignment under a transitional of invariable sites with invariable sites and a gamma-shaped distribution model (TIM2 + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. Scale bar = expected changes per site.
|
||
</paragraph>
|
||
</caption>
|
||
<subSubSection id="C30C657C0E53B141FF65FF67FC79FF42" pageId="9" pageNumber="170" type="materials_examined">
|
||
<paragraph id="8BA936F70E53B141FF65FF67FC79FF42" blockId="9.[151,1437,151,1464]" pageId="9" pageNumber="170">
|
||
<emphasis id="B962EAE50E53B141FF65FF67FE4AFF00" bold="true" box="[199,497,151,176]" pageId="9" pageNumber="170">
|
||
<typeStatus id="54AD88550E53B141FF65FF67FEB9FF00" box="[199,258,151,176]" pageId="9" pageNumber="170">Type</typeStatus>
|
||
host and locality.
|
||
</emphasis>
|
||
The
|
||
<typeStatus id="54AD88550E53B141FD9DFF68FDD4FF00" box="[575,623,152,176]" pageId="9" pageNumber="170">type</typeStatus>
|
||
specimens were extracted from the rhizosphere of camphor tree (
|
||
<taxonomicName id="4C164D740E53B141FF02FF49FE03FF61" box="[160,440,185,209]" class="Magnoliopsida" family="Lauraceae" genus="Cinnamomum" higherTaxonomySource="CoL" kingdom="Plantae" order="Laurales" pageId="9" pageNumber="170" phylum="Magnoliopsida" rank="species" species="camphora">
|
||
<emphasis id="B962EAE50E53B141FF02FF49FE03FF61" box="[160,440,185,209]" italics="true" pageId="9" pageNumber="170">Cinnamomum camphora</emphasis>
|
||
</taxonomicName>
|
||
(L.) Presl), Hu-shan Garden,
|
||
<collectingRegion id="49D2F8150E53B141FCB2FF49FC59FF62" box="[784,994,185,210]" country="China" name="Zhejiang" pageId="9" pageNumber="170">Zhejiang Province</collectingRegion>
|
||
, P. R.
|
||
<collectingCountry id="F30176670E53B141FB8DFF49FBCEFF62" box="[1071,1141,185,210]" name="China" pageId="9" pageNumber="170">China</collectingCountry>
|
||
, on
|
||
<date id="FFA810370E53B141FB05FF49FADFFF61" box="[1191,1380,185,210]" pageId="9" pageNumber="170" value="2017-10-02">October 2, 2017</date>
|
||
. The geographical position of the sampling site is 120°11"60' E; 30°21"47' N.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C30C657C0E53B141FF65FF0CFD74FE78" pageId="9" pageNumber="170" type="etymology">
|
||
<paragraph id="8BA936F70E53B141FF65FF0CFD61FE88" blockId="9.[151,1437,151,1464]" pageId="9" pageNumber="170">
|
||
<emphasis id="B962EAE50E53B141FF65FF0CFEF5FEA5" bold="true" box="[199,334,252,277]" pageId="9" pageNumber="170">Etymology.</emphasis>
|
||
The species is named in honor of Dr. Sergei A. Subbotin for his extraordinary contribution to our knowledge of nematode taxonomy and systematics.
|
||
</paragraph>
|
||
<paragraph id="8BA936F70E53B141FF65FEB4FD74FE78" blockId="9.[151,1437,151,1464]" pageId="9" pageNumber="170">
|
||
<emphasis id="B962EAE50E53B141FF65FEB4FECCFEED" bold="true" box="[199,375,324,349]" pageId="9" pageNumber="170">Type-material.</emphasis>
|
||
<typeStatus id="54AD88550E53B141FEDCFEB4FE5DFEED" box="[382,486,324,349]" pageId="9" pageNumber="170" type="holotype">Holotype</typeStatus>
|
||
female,
|
||
<specimenCount id="9D10FD7E0E53B141FDE5FEB4FD0DFEED" box="[583,694,324,349]" pageId="9" pageNumber="170" type="female">10 female</specimenCount>
|
||
<typeStatus id="54AD88550E53B141FD1FFEB5FC93FEED" box="[701,808,325,349]" pageId="9" pageNumber="170" type="paratype">paratypes</typeStatus>
|
||
(slide numbers ZJU-19-01-ZJU-19-06) deposited in the nematode collection,
|
||
<collectingRegion id="49D2F8150E53B141FE2CFE97FE49FE30" box="[398,498,359,384]" country="China" name="Zhejiang" pageId="9" pageNumber="170">Zhejiang</collectingRegion>
|
||
University, Hangzhou,
|
||
<collectingCountry id="F30176670E53B141FCAAFE97FCF4FE30" box="[776,847,359,384]" name="China" pageId="9" pageNumber="170">China</collectingCountry>
|
||
. Two female
|
||
<typeStatus id="54AD88550E53B141FC52FE98FBE0FE30" box="[1008,1115,360,384]" pageId="9" pageNumber="170" type="paratype">paratypes</typeStatus>
|
||
deposited in the Nematode collection in Institute for Sustainable Agriculture, CSIC, Córdoba,
|
||
<collectingCountry id="F30176670E53B141FC2CFE7CFC6AFE15" box="[910,977,396,421]" name="Spain" pageId="9" pageNumber="170">Spain</collectingCountry>
|
||
. Two females (slide number T-6986p) at USDA nematode collection, Beltsville, MD,
|
||
<collectingCountry id="F30176670E53B141FD2DFE40FD70FE78" box="[655,715,432,456]" name="United States of America" pageId="9" pageNumber="170">USA</collectingCountry>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C30C657C0E53B141FF65FE24FA86FA08" pageId="9" pageNumber="170" type="description">
|
||
<paragraph id="8BA936F70E53B141FF65FE24FDB5FD84" blockId="9.[151,1437,151,1464]" pageId="9" pageNumber="170">
|
||
<emphasis id="B962EAE50E53B141FF65FE24FE78FE5D" bold="true" box="[199,451,468,493]" pageId="9" pageNumber="170">Polytomous key code</emphasis>
|
||
. According to the polytomous key of Chitambar and Subbotin (2014), the new species has the following specific alphanumeric codes: A4, B2, C1, D21, E2, F12, G3, H3,
|
||
<date id="FFA810370E53B141FB99FE08FBEFFDA0" box="[1083,1108,504,528]" pageId="9" pageNumber="170">I2</date>
|
||
, J2, K4, L3, M2, N2, O2, P1, Q3, R6, S2, T2, U2,
|
||
<date id="FFA810370E53B141FEDCFDECFE1FFD84" box="[382,420,540,564]" pageId="9" pageNumber="170">V2</date>
|
||
, W1,
|
||
<date id="FFA810370E53B141FE47FDECFDB5FD84" box="[485,526,540,564]" pageId="9" pageNumber="170">X1.</date>
|
||
</paragraph>
|
||
<paragraph id="8BA936F70E53B141FF65FDCFFE92FCC8" blockId="9.[151,1437,151,1464]" pageId="9" pageNumber="170">
|
||
<emphasis id="B962EAE50E53B141FF65FDCFFC2EFDE8" bold="true" box="[199,917,575,600]" pageId="9" pageNumber="170">Molecular characterization and phylogenetic relationships.</emphasis>
|
||
The sequenced fragments of D2–D3 of 28S rRNA, ITS, and the partial 18S rRNA were
|
||
<emphasis id="B962EAE50E53B141FD15FD95FD69FDCC" box="[695,722,613,636]" italics="true" pageId="9" pageNumber="170">ca</emphasis>
|
||
729–732 bp, 797–799 bp, and
|
||
<date id="FFA810370E53B141FBF6FD94FB6AFDCD" box="[1108,1233,612,637]" pageId="9" pageNumber="170" value="1795" valueMax="1798">1795–1798</date>
|
||
bp, respectively. Sequences from
|
||
<taxonomicName id="4C164D740E53B141FEF0FD79FE67FD10" authority="Maria & Cai & Qu & Castillo & Zheng, 2018" authorityName="Maria & Cai & Qu & Castillo & Zheng" authorityYear="2018" box="[338,476,648,672]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="subbotini" status="sp. nov.">
|
||
<emphasis id="B962EAE50E53B141FEF0FD79FE67FD10" box="[338,476,648,672]" italics="true" pageId="9" pageNumber="170">H. subbotini</emphasis>
|
||
</taxonomicName>
|
||
<emphasis id="B962EAE50E53B141FE46FD77FD98FD10" bold="true" box="[484,547,647,672]" pageId="9" pageNumber="170">
|
||
<taxonomicNameLabel id="A251579E0E53B141FE46FD77FD98FD10" box="[484,547,647,672]" pageId="9" pageNumber="170" rank="species">n. sp.</taxonomicNameLabel>
|
||
</emphasis>
|
||
matched well with the
|
||
<taxonomicName id="4C164D740E53B141FC89FD78FC55FD10" authorityName="de Man" authorityYear="1921" box="[811,1006,648,672]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="genus">
|
||
<emphasis id="B962EAE50E53B141FC89FD78FC55FD10" box="[811,1006,648,672]" italics="true" pageId="9" pageNumber="170">Hemicycliophora</emphasis>
|
||
</taxonomicName>
|
||
spp. sequences deposited in GenBank all of them is clearly different. Three new D2–D3 of 28S rRNA gene sequences of
|
||
<taxonomicName id="4C164D740E53B141FB90FD5DFB07FD74" authority="Maria & Cai & Qu & Castillo & Zheng, 2018" authorityName="Maria & Cai & Qu & Castillo & Zheng" authorityYear="2018" box="[1074,1212,684,708]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="subbotini" status="sp. nov.">
|
||
<emphasis id="B962EAE50E53B141FB90FD5DFB07FD74" box="[1074,1212,684,708]" italics="true" pageId="9" pageNumber="170">H. subbotini</emphasis>
|
||
</taxonomicName>
|
||
<emphasis id="B962EAE50E53B141FB61FD5CFABAFD75" bold="true" box="[1219,1281,684,709]" pageId="9" pageNumber="170">
|
||
<taxonomicNameLabel id="A251579E0E53B141FB61FD5CFABAFD75" box="[1219,1281,684,709]" pageId="9" pageNumber="170" rank="species">n. sp.</taxonomicNameLabel>
|
||
</emphasis>
|
||
(
|
||
<accessionNumber id="9445AB140E53B141FAB2FD5CFA2FFD75" box="[1296,1428,684,709]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MG701275" pageId="9" pageNumber="170">MG701275</accessionNumber>
|
||
-
|
||
<accessionNumber id="9445AB140E53B141FF35FD20FEA1FD58" box="[151,282,720,744]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MG701277" pageId="9" pageNumber="170">MG701277</accessionNumber>
|
||
) were obtained in the present study showing 99% similarity among them (1–2 bp, 1–2 indels). These sequences showed a 92–93% identity (differed in 43–53 bp) with several
|
||
<taxonomicName id="4C164D740E53B141FBB3FD04FB68FCBC" authorityName="de Man" authorityYear="1921" box="[1041,1235,756,780]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="genus">
|
||
<emphasis id="B962EAE50E53B141FBB3FD04FB68FCBC" box="[1041,1235,756,780]" italics="true" pageId="9" pageNumber="170">Hemicycliophora</emphasis>
|
||
</taxonomicName>
|
||
spp. such as
|
||
<taxonomicName id="4C164D740E53B141FA23FD05FE9CFC80" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="epicharoides">
|
||
<emphasis id="B962EAE50E53B141FA23FD05FE9CFC80" italics="true" pageId="9" pageNumber="170">H. epicharoides</emphasis>
|
||
</taxonomicName>
|
||
(
|
||
<accessionNumber id="9445AB140E53B141FE95FCE7FE0FFC80" box="[311,436,791,816]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KF430512" pageId="9" pageNumber="170">KF430512</accessionNumber>
|
||
,
|
||
<accessionNumber id="9445AB140E53B141FE63FCE7FD86FC80" box="[449,573,791,816]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KF430513" pageId="9" pageNumber="170">KF430513</accessionNumber>
|
||
),
|
||
<taxonomicName id="4C164D740E53B141FDF1FCE8FCAEFC80" authorityName="de Man" authorityYear="1921" box="[595,789,792,816]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="genus">
|
||
<emphasis id="B962EAE50E53B141FDF1FCE8FCAEFC80" box="[595,789,792,816]" italics="true" pageId="9" pageNumber="170">Hemicycliophora</emphasis>
|
||
</taxonomicName>
|
||
sp. 13 (
|
||
<accessionNumber id="9445AB140E53B141FCD7FCE7FC48FC80" box="[885,1011,791,816]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KF430507" pageId="9" pageNumber="170">KF430507</accessionNumber>
|
||
),
|
||
<taxonomicName id="4C164D740E53B141FBAAFCE8FB71FC80" authorityName="de Man" authorityYear="1921" box="[1032,1226,792,816]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="genus">
|
||
<emphasis id="B962EAE50E53B141FBAAFCE8FB71FC80" box="[1032,1226,792,816]" italics="true" pageId="9" pageNumber="170">Hemicycliophora</emphasis>
|
||
</taxonomicName>
|
||
sp. 9 (
|
||
<accessionNumber id="9445AB140E53B141FABEFCE7FA23FC80" box="[1308,1432,791,816]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KF430511" pageId="9" pageNumber="170">KF430511</accessionNumber>
|
||
,
|
||
<accessionNumber id="9445AB140E53B141FF35FCCCFEA8FCE4" box="[151,275,828,852]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/AY780973" pageId="9" pageNumber="170">AY780973</accessionNumber>
|
||
,
|
||
<accessionNumber id="9445AB140E53B141FE82FCCCFE27FCE5" box="[288,412,828,853]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KF430515" pageId="9" pageNumber="170">KF430515</accessionNumber>
|
||
),
|
||
<taxonomicName id="4C164D740E53B141FE13FCCDFD9CFCE4" box="[433,551,829,852]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="signata">
|
||
<emphasis id="B962EAE50E53B141FE13FCCDFD9CFCE4" box="[433,551,829,852]" italics="true" pageId="9" pageNumber="170">H. signata</emphasis>
|
||
</taxonomicName>
|
||
(
|
||
<accessionNumber id="9445AB140E53B141FD95FCCCFD05FCE4" box="[567,702,828,852]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MG019824" pageId="9" pageNumber="170">MG019824</accessionNumber>
|
||
),
|
||
<taxonomicName id="4C164D740E53B141FD70FCCCFC2EFCE4" authorityName="de Man" authorityYear="1921" box="[722,917,828,852]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="genus">
|
||
<emphasis id="B962EAE50E53B141FD70FCCCFC2EFCE4" box="[722,917,828,852]" italics="true" pageId="9" pageNumber="170">Hemicycliophora</emphasis>
|
||
</taxonomicName>
|
||
sp. 2 (
|
||
<accessionNumber id="9445AB140E53B141FC41FCCCFBDBFCE5" box="[995,1120,828,853]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KF430516" pageId="9" pageNumber="170">KF430516</accessionNumber>
|
||
,
|
||
<accessionNumber id="9445AB140E53B141FBCEFCCCFB53FCE5" box="[1132,1256,828,853]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KF430517" pageId="9" pageNumber="170">KF430517</accessionNumber>
|
||
), and
|
||
<taxonomicName id="4C164D740E53B141FA8FFCCDFA27FCE4" box="[1325,1436,828,852]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="obtusa">
|
||
<emphasis id="B962EAE50E53B141FA8FFCCDFA27FCE4" box="[1325,1436,828,852]" italics="true" pageId="9" pageNumber="170">H. obtusa</emphasis>
|
||
</taxonomicName>
|
||
(
|
||
<accessionNumber id="9445AB140E53B141FF3DFCAFFEA6FCC8" box="[159,285,863,888]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KF430521" pageId="9" pageNumber="170">KF430521</accessionNumber>
|
||
).
|
||
</paragraph>
|
||
<paragraph id="8BA936F70E53B141FF65FC74FD5DFBC5" blockId="9.[151,1437,151,1464]" pageId="9" pageNumber="170">
|
||
Three new ITS sequences of
|
||
<taxonomicName id="4C164D740E53B141FDB1FC75FD25FC2C" authority="Maria & Cai & Qu & Castillo & Zheng, 2018" authorityName="Maria & Cai & Qu & Castillo & Zheng" authorityYear="2018" box="[531,670,900,924]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="subbotini" status="sp. nov.">
|
||
<emphasis id="B962EAE50E53B141FDB1FC75FD25FC2C" box="[531,670,900,924]" italics="true" pageId="9" pageNumber="170">H. subbotini</emphasis>
|
||
</taxonomicName>
|
||
<emphasis id="B962EAE50E53B141FD05FC74FD5CFC2D" bold="true" box="[679,743,900,925]" pageId="9" pageNumber="170">
|
||
<taxonomicNameLabel id="A251579E0E53B141FD05FC74FD5CFC2D" box="[679,743,900,925]" pageId="9" pageNumber="170" rank="species">n. sp.</taxonomicNameLabel>
|
||
</emphasis>
|
||
(
|
||
<accessionNumber id="9445AB140E53B141FD55FC74FCC0FC2C" box="[759,891,900,924]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MG701272" pageId="9" pageNumber="170">MG701272</accessionNumber>
|
||
-
|
||
<accessionNumber id="9445AB140E53B141FC20FC74FBBDFC2C" box="[898,1030,900,924]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MG701274" pageId="9" pageNumber="170">MG701274</accessionNumber>
|
||
) were obtained in the present study (identical among them), showing 87–88% identity (79–87 bp) with
|
||
<taxonomicName id="4C164D740E53B141FC19FC59FBE6FC70" authorityName="Brzeski" authorityYear="1974" box="[955,1117,936,960]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="californica">
|
||
<emphasis id="B962EAE50E53B141FC19FC59FBE6FC70" box="[955,1117,936,960]" italics="true" pageId="9" pageNumber="170">H. californica</emphasis>
|
||
</taxonomicName>
|
||
(
|
||
<accessionNumber id="9445AB140E53B141FBD3FC57FB56FC70" box="[1137,1261,935,960]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KF430576" pageId="9" pageNumber="170">KF430576</accessionNumber>
|
||
) and
|
||
<taxonomicName id="4C164D740E53B141FA96FC59FA27FC70" authorityName="Brzeski" authorityYear="1974" box="[1332,1436,936,960]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="raskii">
|
||
<emphasis id="B962EAE50E53B141FA96FC59FA27FC70" box="[1332,1436,936,960]" italics="true" pageId="9" pageNumber="170">H. raskii</emphasis>
|
||
</taxonomicName>
|
||
(
|
||
<accessionNumber id="9445AB140E53B141FF3CFC3CFEA6FC55" box="[158,285,972,997]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KF430577" pageId="9" pageNumber="170">KF430577</accessionNumber>
|
||
). Three near-full-length 18S rRNA sequences of
|
||
<taxonomicName id="4C164D740E53B141FC20FC3DFBAEFC54" authority="Maria & Cai & Qu & Castillo & Zheng, 2018" authorityName="Maria & Cai & Qu & Castillo & Zheng" authorityYear="2018" box="[898,1045,972,996]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="subbotini" status="sp. nov.">
|
||
<emphasis id="B962EAE50E53B141FC20FC3DFBAEFC54" box="[898,1045,972,996]" italics="true" pageId="9" pageNumber="170">H. subbotini</emphasis>
|
||
</taxonomicName>
|
||
<emphasis id="B962EAE50E53B141FB87FC3CFBD5FC55" bold="true" box="[1061,1134,972,997]" pageId="9" pageNumber="170">
|
||
<taxonomicNameLabel id="A251579E0E53B141FB87FC3CFBD5FC55" box="[1061,1134,972,997]" pageId="9" pageNumber="170" rank="species">n. sp.</taxonomicNameLabel>
|
||
</emphasis>
|
||
(
|
||
<accessionNumber id="9445AB140E53B141FB27FC3CFAB2FC54" box="[1157,1289,972,996]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MG701278" pageId="9" pageNumber="170">MG701278</accessionNumber>
|
||
-
|
||
<accessionNumber id="9445AB140E53B141FAB2FC3CFA2EFC54" box="[1296,1429,972,996]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MG701278" pageId="9" pageNumber="170">MG701278</accessionNumber>
|
||
) (identical among them), showed a high similarity with other three
|
||
<taxonomicName id="4C164D740E53B141FC39FC00FBE5FBB8" authorityName="de Man" authorityYear="1921" box="[923,1118,1008,1032]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="genus">
|
||
<emphasis id="B962EAE50E53B141FC39FC00FBE5FBB8" box="[923,1118,1008,1032]" italics="true" pageId="9" pageNumber="170">Hemicycliophora</emphasis>
|
||
</taxonomicName>
|
||
spp. being 97–98% similar (49–52 bp) to
|
||
<taxonomicName id="4C164D740E53B141FEE1FBE5FE4FFB9C" authorityName="Schneider" authorityYear="1925" box="[323,500,1044,1068]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="thienemanni">
|
||
<emphasis id="B962EAE50E53B141FEE1FBE5FE4FFB9C" box="[323,500,1044,1068]" italics="true" pageId="9" pageNumber="170">H. thienemanni</emphasis>
|
||
</taxonomicName>
|
||
(
|
||
<accessionNumber id="9445AB140E53B141FDA4FBE4FD3EFB9D" box="[518,645,1044,1069]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/AY284629" pageId="9" pageNumber="170">AY284629</accessionNumber>
|
||
,
|
||
<accessionNumber id="9445AB140E53B141FD36FBE4FCAAFB9D" box="[660,785,1044,1069]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/AY284628" pageId="9" pageNumber="170">AY284628</accessionNumber>
|
||
, EU3066341) and
|
||
<taxonomicName id="4C164D740E53B141FC4DFBE5FBDCFB9C" authorityName="Goodey" authorityYear="1963" box="[1007,1127,1044,1068]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="thornei">
|
||
<emphasis id="B962EAE50E53B141FC4DFBE5FBDCFB9C" box="[1007,1127,1044,1068]" italics="true" pageId="9" pageNumber="170">H. thornei</emphasis>
|
||
</taxonomicName>
|
||
(
|
||
<accessionNumber id="9445AB140E53B141FBD8FBE4FB48FB9D" box="[1146,1267,1044,1069]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KJ636437" pageId="9" pageNumber="170">KJ636437</accessionNumber>
|
||
). Phylogenetic relationships among
|
||
<taxonomicName id="4C164D740E53B141FE27FBC8FDF3FBE0" authorityName="de Man" authorityYear="1921" box="[389,584,1080,1104]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="genus">
|
||
<emphasis id="B962EAE50E53B141FE27FBC8FDF3FBE0" box="[389,584,1080,1104]" italics="true" pageId="9" pageNumber="170">Hemicycliophora</emphasis>
|
||
</taxonomicName>
|
||
species inferred from analyses of D2–D3 expansion segments of 28S and ITS sequences using BI are given in
|
||
<figureCitation id="132D2A720E53B141FD90FBACFD20FBC4" box="[562,667,1116,1141]" captionStart="FIGURE 4" captionStartId="7.[151,250,1801,1823]" captionTargetBox="[160,1428,199,1770]" captionTargetId="figure@7.[160,1429,196,1776]" captionTargetPageId="7" captionText="FIGURE 4. Phylogenetic relationships of Hemicycliophora subbotini n. sp. Bayesian 50% majority rule consensus tree as inferred from D2 and D3 expansion segments of 28S rRNA sequence alignment under a transitional of invariable sites with invariable sites and a gamma-shaped distribution model (TIM3 + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. Scale bar = expected changes per site." httpUri="https://zenodo.org/record/1287799/files/figure.png" pageId="9" pageNumber="170">Figures 4</figureCitation>
|
||
and
|
||
<figureCitation id="132D2A720E53B141FD70FBACFD59FBC5" box="[722,738,1116,1141]" captionStart="FIGURE 5" captionStartId="8.[151,250,1920,1942]" captionTargetBox="[172,1415,195,1898]" captionTargetId="figure@8.[172,1416,193,1902]" captionTargetPageId="8" captionText="FIGURE 5. Phylogenetic relationships of Hemicycliophora subbotini n. sp. Bayesian 50% majority rule consensus tree as inferred from ITS rRNA sequence alignment under a transitional of invariable sites with invariable sites and a gamma-shaped distribution model (TIM2 + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. Scale bar = expected changes per site." httpUri="https://zenodo.org/record/1287801/files/figure.png" pageId="9" pageNumber="170">5</figureCitation>
|
||
.
|
||
</paragraph>
|
||
<paragraph id="8BA936F70E53B141FF65FB8FFA86FA08" blockId="9.[151,1437,151,1464]" pageId="9" pageNumber="170">
|
||
The D2–D3 expansion segments of 28S rRNA tree (
|
||
<figureCitation id="132D2A720E53B141FC9AFB8FFC3AFB28" box="[824,897,1151,1176]" captionStart="FIGURE 4" captionStartId="7.[151,250,1801,1823]" captionTargetBox="[160,1428,199,1770]" captionTargetId="figure@7.[160,1429,196,1776]" captionTargetPageId="7" captionText="FIGURE 4. Phylogenetic relationships of Hemicycliophora subbotini n. sp. Bayesian 50% majority rule consensus tree as inferred from D2 and D3 expansion segments of 28S rRNA sequence alignment under a transitional of invariable sites with invariable sites and a gamma-shaped distribution model (TIM3 + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. Scale bar = expected changes per site." httpUri="https://zenodo.org/record/1287799/files/figure.png" pageId="9" pageNumber="170">Fig. 4</figureCitation>
|
||
), based on a multiple edited alignment of 80 sequences and 667 total characters, revealed nine major well-to low supported clades (PP = 1.00, PP ≤0.70, respectively), I, II, III, IV, Va, Vb, VI, VII, and VIII as numbered by Subbotin
|
||
<emphasis id="B962EAE50E53B141FBA7FB39FB85FB50" box="[1029,1086,1224,1248]" italics="true" pageId="9" pageNumber="170">et al.</emphasis>
|
||
(2014) and Van den
|
||
<bibRefCitation id="EF874B060E53B141FA85FB39FF5FFAB4" pageId="9" pageNumber="170" refId="ref6486" refString="Van den Berg, E., Tiedt, L. R., Liebanas, G., Chitambar, J. J., Stanley, J. D., Inserra, R. N., Castillo, P. & Subbotin, S. A. (2018) Morphological and molecular characterization of two new Hemicycliophora species (Tylenchida: Hemicycliophoridae) with a revision of the taxonomic status of some known species and a phylogeny of the genus. Nematology, 20, 319 - 354. https: // doi. org / 10.1163 / 15685411 - 00003143" type="journal article">
|
||
Berg
|
||
<emphasis id="B962EAE50E53B141FAC6FB39FA2EFB50" box="[1380,1429,1224,1248]" italics="true" pageId="9" pageNumber="170">et al</emphasis>
|
||
. (2018)
|
||
</bibRefCitation>
|
||
.
|
||
<taxonomicName id="4C164D740E53B141FF53FB1CFD9EFAB4" authority="Maria & Cai & Qu & Castillo & Zheng, 2018" authorityName="Maria & Cai & Qu & Castillo & Zheng" authorityYear="2018" box="[241,549,1260,1284]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="subbotini" status="sp. nov.">
|
||
<emphasis id="B962EAE50E53B141FF53FB1CFD9EFAB4" box="[241,549,1260,1284]" italics="true" pageId="9" pageNumber="170">Hemicycliophora subbotini</emphasis>
|
||
</taxonomicName>
|
||
<emphasis id="B962EAE50E53B141FD8FFB1CFDD5FAB5" bold="true" box="[557,622,1260,1285]" pageId="9" pageNumber="170">
|
||
<taxonomicNameLabel id="A251579E0E53B141FD8FFB1CFDD5FAB5" box="[557,622,1260,1285]" pageId="9" pageNumber="170" rank="species">n. sp.</taxonomicNameLabel>
|
||
</emphasis>
|
||
appeared as a separate basal clade within species of clade I, II, and III (
|
||
<figureCitation id="132D2A720E53B141FF3DFAFFFF53FA98" box="[159,232,1295,1320]" captionStart="FIGURE 4" captionStartId="7.[151,250,1801,1823]" captionTargetBox="[160,1428,199,1770]" captionTargetId="figure@7.[160,1429,196,1776]" captionTargetPageId="7" captionText="FIGURE 4. Phylogenetic relationships of Hemicycliophora subbotini n. sp. Bayesian 50% majority rule consensus tree as inferred from D2 and D3 expansion segments of 28S rRNA sequence alignment under a transitional of invariable sites with invariable sites and a gamma-shaped distribution model (TIM3 + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. Scale bar = expected changes per site." httpUri="https://zenodo.org/record/1287799/files/figure.png" pageId="9" pageNumber="170">Fig. 4</figureCitation>
|
||
). For ITS rRNA tree (
|
||
<figureCitation id="132D2A720E53B141FE52FAFFFD8CFA98" box="[496,567,1295,1320]" captionStart="FIGURE 5" captionStartId="8.[151,250,1920,1942]" captionTargetBox="[172,1415,195,1898]" captionTargetId="figure@8.[172,1416,193,1902]" captionTargetPageId="8" captionText="FIGURE 5. Phylogenetic relationships of Hemicycliophora subbotini n. sp. Bayesian 50% majority rule consensus tree as inferred from ITS rRNA sequence alignment under a transitional of invariable sites with invariable sites and a gamma-shaped distribution model (TIM2 + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. Scale bar = expected changes per site." httpUri="https://zenodo.org/record/1287801/files/figure.png" pageId="9" pageNumber="170">Fig. 5</figureCitation>
|
||
), the 50% majority-rule BI tree from a multiple sequence alignment of 91 sequences and 723 characters also showed seven (I to VIb) major well to moderately supported clades (PP = 1.00, PP =0.87, respectively).
|
||
<taxonomicName id="4C164D740E53B141FE08FAA8FD67FAC0" authority="Maria & Cai & Qu & Castillo & Zheng, 2018" authorityName="Maria & Cai & Qu & Castillo & Zheng" authorityYear="2018" box="[426,732,1368,1392]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="subbotini" status="sp. nov.">
|
||
<emphasis id="B962EAE50E53B141FE08FAA8FD67FAC0" box="[426,732,1368,1392]" italics="true" pageId="9" pageNumber="170">Hemicycliophora subbotini</emphasis>
|
||
</taxonomicName>
|
||
<emphasis id="B962EAE50E53B141FD41FAA7FC9AFAC0" bold="true" box="[739,801,1367,1392]" pageId="9" pageNumber="170">
|
||
<taxonomicNameLabel id="A251579E0E53B141FD41FAA7FC9AFAC0" box="[739,801,1367,1392]" pageId="9" pageNumber="170" rank="species">n. sp.</taxonomicNameLabel>
|
||
</emphasis>
|
||
,
|
||
<taxonomicName id="4C164D740E53B141FC92FAA9FBD3FAC0" authority="Brzeski 1974" authorityName="Brzeski" authorityYear="1974" box="[816,1128,1367,1392]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="californica">
|
||
<emphasis id="B962EAE50E53B141FC92FAA9FC76FAC0" box="[816,973,1368,1392]" italics="true" pageId="9" pageNumber="170">H. californica</emphasis>
|
||
Brzeski 1974
|
||
</taxonomicName>
|
||
and
|
||
<taxonomicName id="4C164D740E53B141FB3CFAA9FA27FAC0" authority="Brzeski 1974" authorityName="Brzeski" authorityYear="1974" box="[1182,1436,1367,1392]" class="Secernentea" family="Hemicycliophoridae" genus="Hemicycliophora" higherTaxonomySource="GBIF" kingdom="Animalia" order="Tylenchida" pageId="9" pageNumber="170" phylum="Nematoda" rank="species" species="raskii">
|
||
<emphasis id="B962EAE50E53B141FB3CFAA9FABAFAC0" box="[1182,1281,1368,1392]" italics="true" pageId="9" pageNumber="170">H. raskii</emphasis>
|
||
Brzeski 1974
|
||
</taxonomicName>
|
||
clustered together in a moderately supported clade Vb (PP = 0.93) (
|
||
<figureCitation id="132D2A720E53B141FC25FA8CFC77FA25" box="[903,972,1404,1429]" captionStart="FIGURE 5" captionStartId="8.[151,250,1920,1942]" captionTargetBox="[172,1415,195,1898]" captionTargetId="figure@8.[172,1416,193,1902]" captionTargetPageId="8" captionText="FIGURE 5. Phylogenetic relationships of Hemicycliophora subbotini n. sp. Bayesian 50% majority rule consensus tree as inferred from ITS rRNA sequence alignment under a transitional of invariable sites with invariable sites and a gamma-shaped distribution model (TIM2 + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. Scale bar = expected changes per site." httpUri="https://zenodo.org/record/1287801/files/figure.png" pageId="9" pageNumber="170">Fig. 5</figureCitation>
|
||
). No phylogenetic tree based on the nearfull 18S rRNA was carried out in this research since only three species for this gene have been sequenced.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |