188 lines
15 KiB
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188 lines
15 KiB
XML
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<mods:title id="BB57661B33000583F09FCBB9ED61677A">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
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<mods:namePart id="798DCF9BDBF2DD9C6B9C1E7B43D62C59">Zheng, Jinshui</mods:namePart>
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<mods:namePart id="F5750890A5A171751FC9B1ECB9AE6405">Wittouck, Stijn</mods:namePart>
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<mods:namePart id="0086456FE7B52600F0C0673F646100CD">Salvetti, Elisa</mods:namePart>
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<mods:namePart id="AF5A8D34F25A460CB409994CA5706FD9">Harris, Hugh M. B.</mods:namePart>
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<mods:namePart id="EA83953FC83224C40D1E0F80E422D938">Mattarelli, Paola</mods:namePart>
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<mods:namePart id="76B333034C3157BF80DAA64DC2D0514C">O’Toole, Paul W.</mods:namePart>
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<mods:namePart id="D315F5BE8593D4AD235F994423B4EF0D">Pot, Bruno</mods:namePart>
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<mods:namePart id="9066BAF3F796C208598787715E708C2E">Walter, Jens</mods:namePart>
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<mods:namePart id="5919DA965B2CE3ED3F9B9068574F52D5">Watanabe, Koichi</mods:namePart>
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<mods:namePart id="D6964B04373FE9D8CBB116D49CE8D318">Wuyts, Sander</mods:namePart>
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<mods:namePart id="30B56EB5F72634FDB311FE331163CD75">Felis, Giovanna E.</mods:namePart>
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<mods:namePart id="1E243C26A1238D78F90BFEF14B132FE5">Gänzle, Michael G.</mods:namePart>
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<mods:namePart id="3C76B619568009617D9A20CDBC301C13">Lebeer, Sarah</mods:namePart>
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<mods:title id="352DACDBE8A7E4DD29150E3A3F8EEE8B">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:date id="7016C8EC8A9FB57FF388F94F0F8F09B7">2020</mods:date>
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<mods:number id="2FC34884033FCB3034D6C0BD8A5DC6ED">2020-04-15</mods:number>
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<mods:number id="0347D4A4BD8FE0DB5CA0E9910B1693BC">70</mods:number>
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<treatment id="03A8D903D21A0254FFD0FA7C53D334BD" ID-DOI="http://doi.org/10.5281/zenodo.4728388" ID-GBIF-Taxon="181761697" ID-Zenodo-Dep="4728388" LSID="urn:lsid:plazi:treatment:03A8D903D21A0254FFD0FA7C53D334BD" httpUri="http://treatment.plazi.org/id/03A8D903D21A0254FFD0FA7C53D334BD" lastPageNumber="2803" pageId="21" pageNumber="2803">
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DESCRIPTIONOF
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<taxonomicName id="4C011396D21A0254FEDBFA7C51C236D4" authority="ALLII" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" class="Bacilli" family="Lactobacillaceae" genus="Companilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="21" pageNumber="2803" phylum="Firmicutes" rank="species" species="allii" status="comb. nov.">
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<emphasis id="B975B407D21A0254FEDBFA7C51C236D4" bold="true" italics="true" pageId="21" pageNumber="2803">COMPANILACTOBACILLUS ALLII</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A246097CD21A0254FF60FA59506C36D4" box="[201,366,1453,1482]" pageId="21" pageNumber="2803" rank="species">COMB. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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<subSubSection id="C31B3B9ED21A0254FFD0FA2C5399354F" pageId="21" pageNumber="2803" type="discussion">
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<paragraph id="8BBE6815D21A0254FFD0FA2C53A63530" blockId="21.[121,760,1416,1583]" pageId="21" pageNumber="2803">
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<taxonomicName id="4C011396D21A0254FFD0FA2C508936EE" box="[121,395,1496,1520]" class="Bacilli" family="Lactobacillaceae" genus="Companilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="21" pageNumber="2803" phylum="Firmicutes" rank="species" species="allii">
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<emphasis id="B975B407D21A0254FFD0FA2C508936EE" box="[121,395,1496,1520]" italics="true" pageId="21" pageNumber="2803">Companilactobacillus allii</emphasis>
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</taxonomicName>
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(al’li.i. L. gen. n.
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<taxonomicName id="4C011396D21A0254FDE2FA2C537136EE" box="[587,627,1496,1520]" class="Bacilli" family="Lactobacillaceae" genus="Companilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="21" pageNumber="2803" phylum="Firmicutes" rank="species" species="allii">
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<emphasis id="B975B407D21A0254FDE2FA2C537136EE" box="[587,627,1496,1520]" italics="true" pageId="21" pageNumber="2803">allii</emphasis>
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</taxonomicName>
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of Egyptian onions (
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<taxonomicName id="4C011396D21A0254FF7AFA03508C3511" box="[211,398,1527,1551]" class="Liliopsida" family="Amaryllidaceae" genus="Allium" kingdom="Plantae" order="Asparagales" pageId="21" pageNumber="2803" phylum="Tracheophyta" rank="species" species="proliferum">
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<emphasis id="B975B407D21A0254FF7AFA03508C3511" box="[211,398,1527,1551]" italics="true" pageId="21" pageNumber="2803">Allium proliferum</emphasis>
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</taxonomicName>
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), the source of fermented onions, pa-kimchi, from which the type strain was isolated).
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</paragraph>
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<paragraph id="8BBE6815D21A0254FFD0F9B15399354F" blockId="21.[121,667,1603,1629]" box="[121,667,1603,1629]" pageId="21" pageNumber="2803">
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Basonym:
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<taxonomicName id="4C011396D21A0254FF41F9B1534B3543" authority="Jung et al. 2017" authorityName="Jung" authorityYear="2017" box="[232,585,1605,1629]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="21" pageNumber="2803" phylum="Firmicutes" rank="species" species="allii">
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<emphasis id="B975B407D21A0254FF41F9B1509D3543" box="[232,415,1605,1629]" italics="true" pageId="21" pageNumber="2803">Lactobacillus allii</emphasis>
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Jung
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<emphasis id="B975B407D21A0254FE75F9B153053543" box="[476,519,1605,1629]" italics="true" pageId="21" pageNumber="2803">et al</emphasis>
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. 2017
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</taxonomicName>
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, 4939
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<superScript id="7C74C55DD21A0254FD2EF9B75399354F" attach="right" box="[647,667,1603,1617]" fontSize="6" pageId="21" pageNumber="2803">VP</superScript>
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</paragraph>
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</subSubSection>
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<subSubSection id="C31B3B9ED21A0254FFD0F98753D334BD" pageId="21" pageNumber="2803" type="description">
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<paragraph id="8BBE6815D21A0254FFD0F98753A535D4" blockId="21.[121,760,1651,1738]" pageId="21" pageNumber="2803">
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Growth is observed at 25 and 37 °C; hexoses and disaccharides but not pentoses are fermented [
|
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<bibRefCitation id="EF9015E4D21A0254FDA3F967533535B5" author="Jung MY & Lee SH & Lee M & Song JH & Chang JY & Int J" box="[522,567,1683,1707]" pageId="21" pageNumber="2803" pagination="4936 - 4942" refId="ref64478" refString="117. Jung MY, Lee SH, Lee M, Song JH, Chang JY. Lactobacillus allii sp. nov. isolated from scallion kimchi. Int J Syst Evol Microbiol 2017; 67: 4936 - 4942." type="journal article" year="2017">117</bibRefCitation>
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]. The genome size is 2.51 Mbp. The mol% G+C content of DNA is 35.3.
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</paragraph>
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<paragraph id="8BBE6815D21A0254FFD0F91450B535E6" blockId="21.[121,439,1760,1784]" box="[121,439,1760,1784]" pageId="21" pageNumber="2803">Isolated from scallion kimchi.</paragraph>
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<paragraph id="8BBE6815D21A0254FFD0F8FB53E23438" blockId="21.[121,736,1805,1831]" box="[121,736,1805,1831]" pageId="21" pageNumber="2803">
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Thetypestrainis WiKim39
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=KCTC 21077
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<superScript id="7C74C55DD21A0254FDE8F8F953493405" attach="none" box="[577,587,1805,1819]" fontSize="6" pageId="21" pageNumber="2803">T</superScript>
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=JCM 31938
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<superScript id="7C74C55DD21A0254FD7BF8F953D83405" attach="none" box="[722,730,1805,1819]" fontSize="6" pageId="21" pageNumber="2803">T</superScript>
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.
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</paragraph>
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<paragraph id="8BBE6815D21A0254FFD0F8C950D3346A" blockId="21.[121,760,1853,1908]" pageId="21" pageNumber="2803">
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Genome sequence accession numbers:
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<accessionNumber id="9452F5F6D21A0254FDB5F8C95388344B" box="[540,650,1853,1877]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/CP019323" pageId="21" pageNumber="2803">CP019323</accessionNumber>
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(chromosome) and
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<accessionNumber id="9452F5F6D21A0254FF46F8A8505E346A" box="[239,348,1884,1908]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/CP019324" pageId="21" pageNumber="2803">CP019324</accessionNumber>
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(plasmid).
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</paragraph>
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<paragraph id="8BBE6815D21A0254FFD0F87F53D334BD" blockId="21.[121,721,1931,1955]" box="[121,721,1931,1955]" pageId="21" pageNumber="2803">16S RNA gene sequence accession number: NR_159082.</paragraph>
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</treatment>
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