164 lines
16 KiB
XML
164 lines
16 KiB
XML
<document id="D5E95C84FE5FEEED042098F03C8739C9" ID-DOI="10.12651/JSR.2021.10.1.001" ID-ISSN="2713-8615" ID-Zenodo-Dep="8119987" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="diego" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="diego" IM.tables_approvedBy="diego" IM.taxonomicNames_approvedBy="felipe" IM.treatments_approvedBy="diego" checkinTime="1688643489330" checkinUser="felipe" docAuthor="Lee, Jae-Yun, Jeong, Yun-Seok, Kim, Pil Soo & Bae, Dong-Wook Hyun and Jin-Woo" docDate="2021" docId="3411CC53FFFAFFD5FCE81742FD865B06" docLanguage="en" docName="JSpeciesRes.10.1.1-11.pdf" docOrigin="Journal of Species Research 10 (1)" docStyle="DocumentStyle:4D398BFF45FF8CA9E08F546BB06AE372.1:JSpeciesRes.2012-.journal_article" docStyleId="4D398BFF45FF8CA9E08F546BB06AE372" docStyleName="JSpeciesRes.2012-.journal_article" docStyleVersion="1" docTitle="Aerococcus viridans" docType="treatment" docVersion="3" lastPageNumber="9" masterDocId="C828B42BFFFDFFDDFFC11007FFF35C55" masterDocTitle="Isolation and identification of 18 unrecorded prokaryotic species from the intestinal tracts of aquatic animals in Korea" masterLastPageNumber="11" masterPageNumber="1" pageNumber="8" updateTime="1689191107744" updateUser="diego" zenodo-license-document="CC-BY-4.0">
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<mods:mods id="C2A5E46E6654E5649AF84F0B1F91C5CE" xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo id="427EB365953B5D193397A528FBF24692">
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<mods:title id="0D5A4A45C99B765635F96424CB6365E0">Isolation and identification of 18 unrecorded prokaryotic species from the intestinal tracts of aquatic animals in Korea</mods:title>
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</mods:titleInfo>
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<mods:name id="716D0493C1A96932F151AEC2DC53CC17" type="personal">
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<mods:role id="E356626776457970863925405478E032">
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<mods:roleTerm id="296CA113A63470914E75E12027576099">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="0C14DD184CABB78037478007EC0ECBC7">Lee, Jae-Yun</mods:namePart>
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</mods:name>
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<mods:name id="1D3A1AF4A0971EB06F738C1663E09932" type="personal">
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<mods:role id="992BDFC6C442C08BFE804F46714833F8">
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<mods:roleTerm id="9B7975E7DF322F8156CF867FB5908240">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="E2A994F0F6674E1BB885788709328562">Jeong, Yun-Seok</mods:namePart>
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</mods:name>
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<mods:name id="25C6E7C47962C4E4477EAC0C89844824" type="personal">
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<mods:role id="8F2FD693248307130AAFD752046FE1B9">
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<mods:roleTerm id="481E0E098BBB3C2CA7B9AB4C2134CD52">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="20D877FA5A983226918BCB32C385375A">Kim, Pil Soo</mods:namePart>
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</mods:name>
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<mods:name id="497EBD4E1926B0B88D5E98DACC6C2ABB" type="personal">
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<mods:role id="BFDEF40B0F3423D7E55D7D5D8ACDB9C3">
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<mods:roleTerm id="8ED2CFA6B1E7989F5CD2FCCEE3755786">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="3C03850AE1C47511FDA0331E770E97D5">Bae, Dong-Wook Hyun and Jin-Woo</mods:namePart>
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<mods:nameIdentifier id="C91A96FD2182287623654F59D25D7522" type="email">baejw@khu.ac.kr</mods:nameIdentifier>
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</mods:name>
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<mods:typeOfResource id="7DBFEAC8D8524F53BC8F41EB03B20CEF">text</mods:typeOfResource>
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<mods:titleInfo id="E037644CBD9B5B70ABB07A33D3A829D6">
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<mods:title id="08EE753E673A3ACCDEBE2F90CE7B4A7D">Journal of Species Research</mods:title>
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</mods:titleInfo>
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<mods:part id="2CEEA1ED80951FE632651DDBADE5F27D">
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<mods:date id="5E3C27A94E3887C79D87B881801E4590">2021</mods:date>
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<mods:detail id="3245B4E4B651DBBECF7DB776DE86AD92" type="pubDate">
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<mods:number id="433AF67049DA9ABDCCDDFA3C71051E83">2021-02-28</mods:number>
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</mods:detail>
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<mods:detail id="2DB4414E9F482B111ECE672C6DA182ED" type="volume">
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<mods:number id="BA484645B59D3EC56BA91CCF17366478">10</mods:number>
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</mods:detail>
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<mods:detail id="82D177A251050210B3CF7A53DCADC5CA" type="issue">
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<mods:number id="CB80ACCC845900A119F45B5CE01CEC15">1</mods:number>
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<mods:extent id="78149A9DE535CBAD123A62C75B9A87DB" unit="page">
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<mods:start id="FDB8EA9F3A6CF00C0FEB57228FD145DB">1</mods:start>
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<mods:end id="F26416A3CF1FB8D04DAB62E5A681522A">11</mods:end>
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</mods:extent>
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<mods:classification id="62D5B14CF6B8901C186281BA3982C0DB">journal article</mods:classification>
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<mods:identifier id="68636F90B87D8D26194C834CFD0120D6" type="DOI">10.12651/JSR.2021.10.1.001</mods:identifier>
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<mods:identifier id="90561A3C0B98E3B577DFD38B61FCB6B0" type="ISSN">2713-8615</mods:identifier>
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<mods:identifier id="86808A0186B7767C507EA743E43DFE9C" type="Zenodo-Dep">8119987</mods:identifier>
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</mods:mods>
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<treatment id="3411CC53FFFAFFD5FCE81742FD865B06" LSID="urn:lsid:plazi:treatment:3411CC53FFFAFFD5FCE81742FD865B06" httpUri="http://treatment.plazi.org/id/3411CC53FFFAFFD5FCE81742FD865B06" lastPageId="8" lastPageNumber="9" pageId="7" pageNumber="8">
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<subSubSection id="F4A22ECEFFFAFFD5FCE81742FF2B5F54" lastPageId="8" lastPageNumber="9" pageId="7" pageNumber="8" type="nomenclature">
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<paragraph id="BC077D45FFFAFFDAFCE81742FB2D5B08" blockId="7.[809,1246,1861,1885]" box="[809,1246,1861,1885]" pageId="7" pageNumber="8">
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<heading id="E74FCA29FFFAFFDAFCE81742FB2D5B08" box="[809,1246,1861,1885]" fontSize="10" level="2" pageId="7" pageNumber="8" reason="5">
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<emphasis id="8ECCA157FFFAFFDAFCE81742FB2D5B08" bold="true" box="[809,1246,1861,1885]" pageId="7" pageNumber="8">
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Description of
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<taxonomicName id="7BB806C6FFFAFFDAFC111742FB5C5B08" ID-CoL="64Z4L" ID-ENA="1377" box="[976,1199,1861,1885]" class="Bacilli" family="Aerococcaceae" genus="Aerococcus" kingdom="Bacteria" order="Lactobacillales" pageId="7" pageNumber="8" phylum="Firmicutes" rank="species" species="viridans">
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<emphasis id="8ECCA157FFFAFFDAFC111742FB5C5B08" bold="true" box="[976,1199,1861,1885]" italics="true" pageId="7" pageNumber="8">Aerococcus viridans</emphasis>
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</taxonomicName>
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719
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</emphasis>
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</heading>
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</paragraph>
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<paragraph id="BC077D45FFFAFFD5FC811771FF2B5F54" blockId="7.[809,1414,1910,1999]" lastBlockId="8.[174,779,261,899]" lastPageId="8" lastPageNumber="9" pageId="7" pageNumber="8">
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Cells are Gramstainpositive, flagellated and coccus shaped. Colonies are circular, convex, entire and beige colored on MA medium after 48 h incubation at 25℃. Cells reduce nitrate to nitrite and are positive for
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<emphasis id="8ECCA157FFF5FFD5FD091102FD245D48" box="[712,727,261,285]" italics="true" pageId="8" pageNumber="9">β</emphasis>
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glucosidase,
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<emphasis id="8ECCA157FFF5FFD5FED61122FED55D68" box="[279,294,293,317]" italics="true" pageId="8" pageNumber="9">β</emphasis>
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galactosidase, alkaline phosphatase, esterase (C4), leucine arylamidase, valine arylamidase, acid phosphatase, naphtholASBIphosphohydrolase,
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<emphasis id="8ECCA157FFF5FFD5FD4C1161FD6F5D2B" box="[653,668,358,382]" italics="true" pageId="8" pageNumber="9">β</emphasis>
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galactosidase,
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<emphasis id="8ECCA157FFF5FFD5FF2B1181FF0A5DCB" box="[234,249,390,414]" italics="true" pageId="8" pageNumber="9">β</emphasis>
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glucosidase (API 20NE/ZYM). Assimilate Dglucose, Larabinose, Dmannose, Dmannitol,
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<emphasis id="8ECCA157FFF5FFD5FD4D11A0FD6D5DEB" box="[652,670,423,446]" italics="true" pageId="8" pageNumber="9">N</emphasis>
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acetylDglucosamine, Dmaltose, gluconate, malate, phenylacetate, salicin, Dmelibiose, Lfucose, Dsorbitol, 2ketogluconate, Lrhamnose, Dribose, lactate, 5ketogluconate, Lserine (API 20NE/ID 32GN) and utilize dextrin, Dmaltose, Dtrehalose, Dcellobiose, gentiobiose, sucrose, stachyose, D-raffinose,
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<emphasis id="8ECCA157FFF5FFD5FE43126EFE615ED5" box="[386,402,617,640]" italics="true" pageId="8" pageNumber="9">α</emphasis>
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Dlactose,
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<emphasis id="8ECCA157FFF5FFD5FDC6126FFDE65ED5" box="[519,533,616,640]" italics="true" pageId="8" pageNumber="9">β</emphasis>
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Dglucoside, Dsalicin,
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<emphasis id="8ECCA157FFF5FFD5FF6F128EFF4D5EF5" box="[174,190,649,672]" italics="true" pageId="8" pageNumber="9">α</emphasis>
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Dglucose, Dmannose, Dfructose, Dgalactose, Dmannitol, glycerol, pectin, Dgluconic acid, methyl pyruvate and acetoacetic acid as sole carbon sources (Biolog GEN III).
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</paragraph>
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</subSubSection>
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<subSubSection id="F4A22ECEFFF5FFD5FF04130EFD865B06" pageId="8" pageNumber="9" type="description">
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<paragraph id="BC077D45FFF5FFD5FF04130EFD865FD7" blockId="8.[174,779,261,899]" pageId="8" pageNumber="9">
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<materialsCitation id="0CD07718FFF5FFD5FF04130EFDAE5FD7" country="South Korea" county="The" location="Strain" municipality="Chungju" pageId="8" pageNumber="9" specimenCount="1" stateProvince="Chungbuk">
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<location id="B9672B9EFFF5FFD5FF04130EFEF05F74" LSID="urn:lsid:plazi:treatment:3411CC53FFFAFFD5FCE81742FD865B06:B9672B9EFFF5FFD5FF04130EFEF05F74" box="[197,259,777,801]" country="South Korea" county="The" municipality="Chungju" name="Strain" pageId="8" pageNumber="9" stateProvince="Chungbuk">Strain</location>
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719 (= NIBRBAC000503085) was isolated from the gut of
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<location id="B9672B9EFFF5FFD5FEDF132EFE865F14" LSID="urn:lsid:plazi:treatment:3411CC53FFFAFFD5FCE81742FD865B06:B9672B9EFFF5FFD5FEDF132EFE865F14" box="[286,373,809,833]" country="South Korea" county="The" municipality="Chungju" name="Leopard" pageId="8" pageNumber="9" stateProvince="Chungbuk">Leopard</location>
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mandarin fish (
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<taxonomicName id="7BB806C6FFF5FFD5FDDD132DFD155F14" authorityName="Steindachner" authorityYear="1892" box="[540,742,809,833]" class="Actinopterygii" family="Percichthyidae" genus="Siniperca" kingdom="Animalia" order="Perciformes" pageId="8" pageNumber="9" phylum="Chordata" rank="species" species="scherzeri">
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<emphasis id="8ECCA157FFF5FFD5FDDD132DFD155F14" box="[540,742,809,833]" italics="true" pageId="8" pageNumber="9">Siniperca scherzeri</emphasis>
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</taxonomicName>
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) at
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<collectingMunicipality id="5C63E73FFFF5FFD5FF6F134DFEFE5F37" box="[174,269,842,866]" pageId="8" pageNumber="9">Chungju</collectingMunicipality>
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,
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<collectingRegion id="7E7CB3A7FFF5FFD5FEDB134DFDB15F37" box="[282,578,842,866]" country="South Korea" name="Chungbuk" pageId="8" pageNumber="9">Chungcheongbuk Province</collectingRegion>
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,
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<collectingCountry id="C4AF3DD5FFF5FFD5FD8E134DFD675F34" box="[591,660,842,865]" name="South Korea" pageId="8" pageNumber="9">Korea</collectingCountry>
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.
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<collectingCounty id="556605C9FFF5FFD5FD61134DFD395F37" box="[672,714,842,866]" pageId="8" pageNumber="9">The</collectingCounty>
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DNA G + C content of the
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<typeStatus id="6303C3E7FFF5FFD5FE46136CFE475FD6" box="[391,436,875,899]" pageId="8" pageNumber="9">type</typeStatus>
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strain is 39 mol
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</materialsCitation>
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%.
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</paragraph>
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<paragraph id="BC077D45FFF5FFD5FF6F13A5FE905F8E" blockId="8.[174,639,930,987]" pageId="8" pageNumber="9">
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<emphasis id="8ECCA157FFF5FFD5FF6F13A5FE905F8E" bold="true" pageId="8" pageNumber="9">
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Description of
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<taxonomicName id="7BB806C6FFF5FFD5FE9413A5FEC65F8F" class="Gammaproteobacteria" family="Halomonadaceae" genus="Alcaligenes" kingdom="Bacteria" order="Oceanospirillales" pageId="8" pageNumber="9" phylum="Proteobacteria" rank="subSpecies" species="faecalis" subSpecies="parafaecalis">
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<emphasis id="8ECCA157FFF5FFD5FE9413A5FDDC5FEF" bold="true" box="[341,559,930,954]" italics="true" pageId="8" pageNumber="9">Alcaligenes faecalis</emphasis>
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subsp.
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<emphasis id="8ECCA157FFF5FFD5FF6F13C5FEC65F8F" bold="true" box="[174,309,962,986]" italics="true" pageId="8" pageNumber="9">parafaecalis</emphasis>
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</taxonomicName>
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176
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</emphasis>
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</paragraph>
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<paragraph id="BC077D45FFF5FFD5FF0413F3FE995A87" blockId="8.[174,779,1012,1875]" pageId="8" pageNumber="9">
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Cells are Gramstainnegative, flagellated and rod shaped. Colonies are circular, umbonate and beige colored on BHI agar medium after 48 h incubation at 25℃. Cells are positive for alkaline phosphatase, esterase (C4), leucine arylamidase, valine arylamidase, acid phosphatase, naphtholASBIphosphohydrolase (API ZYM) and assimilate Dglucose, caprate, malate, citrate, phenylacetate, propionate, valerate, Lhistidine, 3hydroxybutyrate, Lproline, malonate, acetate, lactate, Lalanine (API 20NE/ ID 32GN). Utilize dextrin, Dcellobiose, gentiobiose, Dturanose, stachyose, Dmelibiose,
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<emphasis id="8ECCA157FFF5FFD5FDD21531FDD1591B" box="[531,546,1334,1358]" italics="true" pageId="8" pageNumber="9">β</emphasis>
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mannosamine,
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<emphasis id="8ECCA157FFF5FFD5FD091530FD2A591B" box="[712,729,1335,1358]" italics="true" pageId="8" pageNumber="9">N</emphasis>
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galactosamine,
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<emphasis id="8ECCA157FFF5FFD5FEF01550FEB2593B" box="[305,321,1367,1390]" italics="true" pageId="8" pageNumber="9">α</emphasis>
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Dglucose, Dmannose, Dfructose, Dgalactose, 6methylglucose, Dfucose, Lfucose, Lrhamnose, Dmannitol, Darabitol, myoinositol, glycerol, Dfructose, Dserine, gelatin, glycylLproline, Lalanine, Larginine, Lglutamic acid, Lhistidine, pyroglutamic acid, Lserine, pectin, galacturonic acid, galactonic lactone, Dgluconic acid, Dglucuronic acid, glucuronamide, phenylacetic acid, methyl pyruvate, Dlactic acid, Llactic acid, citric acid,
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<emphasis id="8ECCA157FFF5FFD5FEA6165EFE845A25" box="[359,375,1625,1648]" italics="true" pageId="8" pageNumber="9">α</emphasis>
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glutaric acid, Dmalic acid, Lmalic acid, succinic acid, Tween40,
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<emphasis id="8ECCA157FFF5FFD5FE30167EFDF35AC4" box="[497,512,1657,1681]" italics="true" pageId="8" pageNumber="9">β</emphasis>
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butyric acid, acetoacetic acid, propionic acid and acetic acid as sole carbon sources (Biolog GEN III).
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</paragraph>
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<paragraph id="BC077D45FFF5FFD5FF0416DDFD865B06" blockId="8.[174,779,1012,1875]" pageId="8" pageNumber="9">
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<materialsCitation id="0CD07718FFF5FFD5FF0416DDFDAE5B06" country="South Korea" county="The" location="Strain" municipality="Chungju" pageId="8" pageNumber="9" specimenCount="1" stateProvince="Chungbuk">
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<location id="B9672B9EFFF5FFD5FF0416DDFEF05AA7" LSID="urn:lsid:plazi:treatment:3411CC53FFFAFFD5FCE81742FD865B06:B9672B9EFFF5FFD5FF0416DDFEF05AA7" box="[197,259,1754,1778]" country="South Korea" county="The" municipality="Chungju" name="Strain" pageId="8" pageNumber="9" stateProvince="Chungbuk">Strain</location>
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176 (= NIBRBAC000503086) was isolated from the gut of
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<location id="B9672B9EFFF5FFD5FEDF16FDFE865B47" LSID="urn:lsid:plazi:treatment:3411CC53FFFAFFD5FCE81742FD865B06:B9672B9EFFF5FFD5FEDF16FDFE865B47" box="[286,373,1786,1810]" country="South Korea" county="The" municipality="Chungju" name="Leopard" pageId="8" pageNumber="9" stateProvince="Chungbuk">Leopard</location>
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mandarin fish (
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<taxonomicName id="7BB806C6FFF5FFD5FDDD16FDFD155B47" authorityName="Steindachner" authorityYear="1892" box="[540,742,1786,1810]" class="Actinopterygii" family="Percichthyidae" genus="Siniperca" kingdom="Animalia" order="Perciformes" pageId="8" pageNumber="9" phylum="Chordata" rank="species" species="scherzeri">
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<emphasis id="8ECCA157FFF5FFD5FDDD16FDFD155B47" box="[540,742,1786,1810]" italics="true" pageId="8" pageNumber="9">Siniperca scherzeri</emphasis>
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</taxonomicName>
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) at
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<collectingMunicipality id="5C63E73FFFF5FFD5FF6F171DFEFE5B67" box="[174,269,1818,1842]" pageId="8" pageNumber="9">Chungju</collectingMunicipality>
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,
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<collectingRegion id="7E7CB3A7FFF5FFD5FEDB171DFDB15B67" box="[282,578,1818,1842]" country="South Korea" name="Chungbuk" pageId="8" pageNumber="9">Chungcheongbuk Province</collectingRegion>
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,
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<collectingCountry id="C4AF3DD5FFF5FFD5FD8E171CFD675B67" box="[591,660,1819,1842]" name="South Korea" pageId="8" pageNumber="9">Korea</collectingCountry>
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.
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<collectingCounty id="556605C9FFF5FFD5FD61171DFD395B67" box="[672,714,1818,1842]" pageId="8" pageNumber="9">The</collectingCounty>
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DNA G + C content of the
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<typeStatus id="6303C3E7FFF5FFD5FE46173CFE475B06" box="[391,436,1851,1875]" pageId="8" pageNumber="9">type</typeStatus>
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strain is 56 mol
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</materialsCitation>
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%.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |