165 lines
20 KiB
XML
165 lines
20 KiB
XML
<document id="CAB5A8A0CFAB00FD08FBA2A6F7CFEE42" ID-CLB-Dataset="22150" ID-DOI="10.1093/isd/ixaa004" ID-GBIF-Dataset="430a96d1-f5cd-4234-a35d-3f324ed63974" ID-ISSN="2399-3421" ID-Zenodo-Dep="3826703" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" IM.treatments_approvedBy="felipe" checkinTime="1589462544516" checkinUser="felipe" docAuthor="Longino, John T. & Branstetter, Michael G." docDate="2020" docId="9C548790FFEAFFA8FF6946EFFBD7FEBC" docLanguage="en" docName="InsectSystDivers.4.2.1.1-33.pdf.imf" docOrigin="Insect Systematics and Diversity 4 (2), No. 1" docStyle="DocumentStyle:20C34595BA01015AC07A3B955E96DF74.8:InsectSystDivers.2017-.journal_article" docStyleId="20C34595BA01015AC07A3B955E96DF74" docStyleName="InsectSystDivers.2017-.journal_article" docStyleVersion="8" docTitle="Rasopone" docType="treatment" docVersion="7" lastPageNumber="30" masterDocId="606DFFE8FFF7FFB5FFFB4247FF8BFFCA" masterDocTitle="Phylogenomic Species Delimitation, Taxonomy, and ‘ Bird Guide’ Identification for the Neotropical Ant Genus Rasopone (Hymenoptera: Formicidae)" masterLastPageNumber="33" masterPageNumber="1" pageNumber="30" updateTime="1698839640687" updateUser="ExternalLinkService" zenodo-license-document="CC-BY-4.0">
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<mods:mods id="032CDF06966247A1003513669EE9D396" xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo id="1CB77A22829A4A00458E256C691095A2">
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<mods:title id="BEA82B44DE37F5F5206F3C78CEA98CE6">Phylogenomic Species Delimitation, Taxonomy, and ‘ Bird Guide’ Identification for the Neotropical Ant Genus Rasopone (Hymenoptera: Formicidae)</mods:title>
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<mods:name id="6EDAE9AAA5F644FDD9BF1314E6B85242" type="personal">
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<mods:roleTerm id="C4A311D9733CAB85D8C6CE967B9F3AF2">Author</mods:roleTerm>
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<mods:namePart id="7CEF764448CB80E4F6F1A2AF81B1013E">Longino, John T.</mods:namePart>
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<mods:affiliation id="D0AEDEA761B2BCC9A27BBDEECBC56C72">Department of Biology, University of Utah, Salt Lake City, UT 84112,</mods:affiliation>
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<mods:nameIdentifier id="778333179940EBAA9BC6532BC128B68F" type="email">john.longino@utah.edu</mods:nameIdentifier>
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<mods:roleTerm id="17ACFC49CA2F3A36694F72BC82FE4533">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="B74F72496D7FC9274F61C2E99E58522D">Branstetter, Michael G.</mods:namePart>
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<mods:affiliation id="660EAF7A179478A2565745E519335CA5">USDA-ARS Pollinating Insects Research Unit, Utah State</mods:affiliation>
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</mods:name>
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<mods:typeOfResource id="BB6BED97AD3C1B874CC37435556AB937">text</mods:typeOfResource>
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<mods:title id="FC9FCCA86304F4AAE1FAF537F7D329FD">Insect Systematics and Diversity</mods:title>
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</mods:titleInfo>
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<mods:part id="9EDB0AD8DEBFCDC0FCEA41F0F2288E88">
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<mods:date id="1CFD7C553F490495D5546224F4873CD3">2020</mods:date>
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<mods:number id="866CBEB66722B12476FF6AD5EDABFB8D">2020-03-31</mods:number>
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<treatment id="9C548790FFEAFFA8FF6946EFFBD7FEBC" ID-DOI="http://doi.org/10.5281/zenodo.3847152" ID-GBIF-Taxon="164133773" ID-Zenodo-Dep="3847152" LSID="urn:lsid:plazi:treatment:9C548790FFEAFFA8FF6946EFFBD7FEBC" httpUri="http://treatment.plazi.org/id/9C548790FFEAFFA8FF6946EFFBD7FEBC" lastPageNumber="30" pageId="29" pageNumber="30">
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<subSubSection id="5CE7650DFFEAFFA8FF6946EFFEEDFB75" box="[146,358,1192,1215]" pageId="29" pageNumber="30" type="nomenclature">
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<paragraph id="14423686FFEAFFA8FF6946EFFEEDFB75" blockId="29.[146,474,1192,1275]" box="[146,358,1192,1215]" pageId="29" pageNumber="30">
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<heading id="4F0A81EAFFEAFFA8FF6946EFFEEDFB75" box="[146,358,1192,1215]" fontSize="9" level="2" pageId="29" pageNumber="30" reason="4">
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<taxonomicName id="D3FD4D05FFEAFFA8FF6946EFFE88FB75" box="[146,259,1192,1215]" class="Insecta" family="Formicidae" genus="Rasopone" higherTaxonomySource="GBIF" kingdom="Animalia" order="Hymenoptera" pageId="29" pageNumber="30" phylum="Arthropoda" rank="genus">
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<emphasis id="2689EA94FFEAFFA8FF6946EFFE88FB75" box="[146,259,1192,1215]" italics="true" pageId="29" pageNumber="30">Rasopone</emphasis>
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</taxonomicName>
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MAS010
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="5CE7650DFFEAFFA8FF69468CFE51FB14" box="[146,474,1227,1246]" pageId="29" pageNumber="30" type="description">
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<paragraph id="14423686FFEAFFA8FF69468CFE51FB14" blockId="29.[146,474,1192,1275]" box="[146,474,1227,1246]" pageId="29" pageNumber="30">
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(
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<figureCitation id="8CC62A03FFEAFFA8FF62468CFF46FB14" box="[153,205,1227,1246]" captionStart="Fig" captionStartId="12.[146,173,1808,1825]" captionTargetBox="[186,1401,149,1771]" captionTargetId="figure@12.[184,1403,147,1772]" captionTargetPageId="12" captionText="Fig. 7. Distribution map, face view, and lateral view of petiole of Rasopone MAS010 (worker, Costa Rica, 08COSTA-1723), R. cryptergates (worker, Costa Rica, INB0003660648), R. JTL042 (worker, Colombia, MCZ-ENT00716611),and R. JTL034 (worker, Mexico, CASENT0640282). On distribution maps, red dots are sites with UCE sequence data. Red boxes are type locality." figureDoi="http://doi.org/10.5281/zenodo.3826717" httpUri="https://zenodo.org/record/3826717/files/figure.png" pageId="29" pageNumber="30">Fig. 7</figureCitation>
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; Supp Fig. S47 [online only])
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</paragraph>
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</subSubSection>
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<subSubSection id="5CE7650DFFEAFFA8FF6946AFFE27FB31" box="[146,428,1256,1275]" pageId="29" pageNumber="30" type="distribution">
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<paragraph id="14423686FFEAFFA8FF6946AFFE27FB31" blockId="29.[146,474,1192,1275]" box="[146,428,1256,1275]" pageId="29" pageNumber="30">
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<emphasis id="2689EA94FFEAFFA8FF6946AFFEB1FB31" bold="true" box="[146,314,1256,1275]" pageId="29" pageNumber="30">Geographic range.</emphasis>
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<collectingCountry id="6CEA7616FFEAFFA8FEBB46AFFE23FB31" box="[320,424,1256,1275]" name="Costa Rica" pageId="29" pageNumber="30">Costa Rica</collectingCountry>
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.
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</paragraph>
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</subSubSection>
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<subSection id="7D722F6DFFEAFFA8FF69476FFC88F901" pageId="29" pageNumber="30" type="multiple">
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<subSubSection id="5CE7650DFFEAFFA8FF69476FFDACF9AA" pageId="29" pageNumber="30" type="diagnosis">
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<paragraph id="14423686FFEAFFA8FF69476FFF67FAF1" blockId="29.[146,771,1320,1633]" box="[146,236,1320,1339]" pageId="29" pageNumber="30">
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<emphasis id="2689EA94FFEAFFA8FF69476FFF67FAF1" bold="true" box="[146,236,1320,1339]" pageId="29" pageNumber="30">Diagnosis</emphasis>
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</paragraph>
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<paragraph id="14423686FFEAFFA8FF694701FD62FA59" blockId="29.[146,771,1320,1633]" pageId="29" pageNumber="30">
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Montane; mandible striate; anterior clypeal margin truncate; side of head bare or with a few inconspicuous short setae; petiole scale-like. Two species are within geographic and size range of
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<emphasis id="2689EA94FFEAFFA8FD8E47C6FD0FFA59" box="[629,644,1409,1427]" italics="true" pageId="29" pageNumber="30">R</emphasis>
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. MAS010:
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</paragraph>
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<paragraph id="14423686FFEAFFA8FF4947D9FD97FA21" blockId="29.[146,771,1320,1633]" pageId="29" pageNumber="30">
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<taxonomicName id="D3FD4D05FFEAFFA8FF4947D9FE0BFA7A" box="[178,384,1438,1456]" class="Insecta" family="Formicidae" genus="Rasopone" higherTaxonomySource="GBIF" kingdom="Animalia" order="Hymenoptera" pageId="29" pageNumber="30" phylum="Arthropoda" rank="species" species="cryptergates">
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<emphasis id="2689EA94FFEAFFA8FF4947D9FE0BFA7A" box="[178,384,1438,1456]" italics="true" pageId="29" pageNumber="30">Rasopone cryptergates</emphasis>
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</taxonomicName>
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(
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<figureCitation id="8CC62A03FFEAFFA8FE7047DAFE36FA7B" box="[395,445,1437,1457]" captionStart="Fig" captionStartId="12.[146,173,1808,1825]" captionTargetBox="[186,1401,149,1771]" captionTargetId="figure@12.[184,1403,147,1772]" captionTargetPageId="12" captionText="Fig. 7. Distribution map, face view, and lateral view of petiole of Rasopone MAS010 (worker, Costa Rica, 08COSTA-1723), R. cryptergates (worker, Costa Rica, INB0003660648), R. JTL042 (worker, Colombia, MCZ-ENT00716611),and R. JTL034 (worker, Mexico, CASENT0640282). On distribution maps, red dots are sites with UCE sequence data. Red boxes are type locality." figureDoi="http://doi.org/10.5281/zenodo.3826717" httpUri="https://zenodo.org/record/3826717/files/figure.png" pageId="29" pageNumber="30">Fig.7</figureCitation>
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; Supp
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<figureCitation id="8CC62A03FFEAFFA8FE0247DAFDB6FA7B" box="[505,573,1437,1457]" captionStart="Fig" captionStartId="13.[146,173,1812,1829]" captionTargetBox="[185,1403,149,1776]" captionTargetId="figure@13.[184,1403,147,1777]" captionTargetPageId="13" captionText="Fig. 8. Distribution map, face view, and lateral view of petiole of Rasopone lunaris (worker, Brazil, Minas Gerais CASENT0644556), R. guatemalensis (holotype worker),R. costaricensis form c (worker,Costa Rica,INB0003659307),and R. JTL027 (worker,Panama,CASENT0633216).On distribution maps,red dots are sites with UCE sequence data. Red boxes are type locality." figureDoi="http://doi.org/10.5281/zenodo.3826719" httpUri="https://zenodo.org/record/3826719/files/figure.png" pageId="29" pageNumber="30">Figs. S8</figureCitation>
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and S
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<figureCitation id="8CC62A03FFEAFFA8FD8847D9FDF5FA7B" box="[627,638,1438,1457]" captionStart="Fig" captionStartId="14.[146,173,1809,1826]" captionTargetBox="[188,1402,149,1773]" captionTargetId="figure@14.[186,1402,147,1774]" captionTargetPageId="14" captionText="Fig. 9. Distribution map, face view, and lateral view of petiole of Rasopone costaricensis (holotype worker), R. politognatha (holotype worker), R. JTL035 (worker, Mexico, CASENT0640453), and Rasopone JTL049 (worker, Colombia, CASENT0644557). On distribution maps, red dots are sites with UCE sequence data. Red boxes are type locality." figureDoi="http://doi.org/10.5281/zenodo.3826721" httpUri="https://zenodo.org/record/3826721/files/figure.png" pageId="29" pageNumber="30">9</figureCitation>
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[online only]): lowland; side of head with a few short erect setae; posterolateral margins of vertex somewhat more angular.
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</paragraph>
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<paragraph id="14423686FFEAFFA8FF4947B1FDACF9AA" blockId="29.[146,771,1320,1633]" pageId="29" pageNumber="30">
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<taxonomicName id="D3FD4D05FFEAFFA8FF4947B1FE00F9C2" box="[178,395,1526,1544]" class="Insecta" family="Formicidae" genus="Rasopone" higherTaxonomySource="GBIF" kingdom="Animalia" order="Hymenoptera" pageId="29" pageNumber="30" phylum="Arthropoda" rank="species" species="costaricensis">
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<emphasis id="2689EA94FFEAFFA8FF4947B1FE00F9C2" box="[178,395,1526,1544]" italics="true" pageId="29" pageNumber="30">Rasopone costaricensis</emphasis>
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</taxonomicName>
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(
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<figureCitation id="8CC62A03FFEAFFA8FE6747B2FE5EF9C3" box="[412,469,1525,1545]" captionStart="Fig" captionStartId="14.[146,173,1809,1826]" captionTargetBox="[188,1402,149,1773]" captionTargetId="figure@14.[186,1402,147,1774]" captionTargetPageId="14" captionText="Fig. 9. Distribution map, face view, and lateral view of petiole of Rasopone costaricensis (holotype worker), R. politognatha (holotype worker), R. JTL035 (worker, Mexico, CASENT0640453), and Rasopone JTL049 (worker, Colombia, CASENT0644557). On distribution maps, red dots are sites with UCE sequence data. Red boxes are type locality." figureDoi="http://doi.org/10.5281/zenodo.3826721" httpUri="https://zenodo.org/record/3826721/files/figure.png" pageId="29" pageNumber="30">Fig. 9</figureCitation>
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; Supp
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<figureCitation id="8CC62A03FFEAFFA8FDE547B2FDE2F9C3" box="[542,617,1525,1545]" captionStart="Fig" captionStartId="7.[146,173,1562,1579]" captionTargetBox="[190,1398,146,1525]" captionTargetId="graphics@7.[190,1194,150,1482]" captionTargetPageId="7" captionText="Fig. 3. Phylogenetic relationships among a curated set of COI barcode sequences for Rasopone. Black samples were sequenced for UCEs. Red samples were downloaded from the BOLD database.The tree was inferred using IQ-TREE with the data partitioned by codon position. Black circles on nodes indicate high support, which we define as ≥95% ultrafast bootstrap support and ≥95% SH-like branch support.Terminal names match taxonomic changes proposed in paper and provide useful sample identifiers (e.g., extraction codes [EX#] or BOLD process IDs).A complete,unpruned COI tree is available in Supp Fig. S1 (online only)." figureDoi="http://doi.org/10.5281/zenodo.3826709" httpUri="https://zenodo.org/record/3826709/files/figure.png" pageId="29" pageNumber="30">Figs. S3</figureCitation>
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and S
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<figureCitation id="8CC62A03FFEAFFA8FD5747B1FD3CF9C3" box="[684,695,1526,1545]" captionStart="Fig" captionStartId="9.[146,173,1261,1278]" captionTargetBox="[315,1274,148,1225]" captionTargetId="figure@9.[314,1274,147,1226]" captionTargetPageId="9" captionText="Fig. 4. Dealate queen of Rasopone ferruginea (Nicaragua, CASENT0624181). Scale bars are 0.5 mm for face view, 1.0 mm for dorsal and lateral views." figureDoi="http://doi.org/10.5281/zenodo.3826711" httpUri="https://zenodo.org/record/3826711/files/figure.png" pageId="29" pageNumber="30">4</figureCitation>
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[online only]): larger, HW of the smallest measured specimen 1.09, versus 1.00 for both of the measured specimens of
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<emphasis id="2689EA94FFEAFFA8FDBF4476FDD8F989" box="[580,595,1585,1603]" italics="true" pageId="29" pageNumber="30">R</emphasis>
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. MAS010; petiole somewhat narrower (average PTI 53 vs 59).
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</paragraph>
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</subSubSection>
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<subSubSection id="5CE7650DFFEAFFA8FF694439FC88F901" pageId="29" pageNumber="30" type="description">
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<paragraph id="14423686FFEAFFA8FF694439FC88F901" blockId="29.[146,771,1662,1740]" pageId="29" pageNumber="30">
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<emphasis id="2689EA94FFEAFFA8FF694439FEE5F95B" bold="true" box="[146,366,1662,1681]" pageId="29" pageNumber="30">Measurements, worker:</emphasis>
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HW 1.00 (1.00-1.00, 2); HL 1.13 (1.13- 1.13, 2); SL 0.79 (0.78–0.81, 2); PTH 0.70 (0.70–0.71, 2); PTL 0.41 (0.41-0.41, 2); CI 88 (88-88, 2); SI 80 (78–81, 2); PTI 59 (58–59, 2).
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</paragraph>
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</subSubSection>
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</subSection>
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<subSection id="7D722F6DFFEAFFA8FF6944BFFD87F8E2" box="[146,524,1784,1833]" pageId="29" pageNumber="30" type="multiple">
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<subSubSection id="5CE7650DFFEAFFA8FF6944BFFD87F8E2" box="[146,524,1784,1833]" pageId="29" pageNumber="30" type="biology_ecology">
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<paragraph id="14423686FFEAFFA8FF6944BFFF52F8C1" blockId="29.[146,524,1784,1833]" box="[146,217,1784,1803]" pageId="29" pageNumber="30">
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<emphasis id="2689EA94FFEAFFA8FF6944BFFF52F8C1" bold="true" box="[146,217,1784,1803]" pageId="29" pageNumber="30">Biology</emphasis>
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</paragraph>
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<paragraph id="14423686FFEAFFA8FF694552FD87F8E2" blockId="29.[146,524,1784,1833]" box="[146,524,1813,1833]" pageId="29" pageNumber="30">This species occurs in lower cloud forest.</paragraph>
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</subSubSection>
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</subSection>
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<subSection id="7D722F6DFFEAFFA8FF694512FBD7FEBC" pageId="29" pageNumber="30" type="multiple">
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<subSubSection id="5CE7650DFFEAFFA8FF694512FBD7FEBC" pageId="29" pageNumber="30" type="discussion">
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<paragraph id="14423686FFEAFFA8FF694512FF7DF8A2" blockId="29.[146,770,1877,1956]" box="[146,246,1877,1896]" pageId="29" pageNumber="30">
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<emphasis id="2689EA94FFEAFFA8FF694512FF7DF8A2" bold="true" box="[146,246,1877,1896]" pageId="29" pageNumber="30">Comments</emphasis>
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</paragraph>
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<paragraph id="14423686FFEAFFA8FF694534FAA2FED4" blockId="29.[146,770,1877,1956]" lastBlockId="29.[818,1442,149,374]" pageId="29" pageNumber="30">
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This species is known from three specimens that form a DNA barcode cluster. One specimen is a male from Volcán Cacao, a cloud forest site (
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<quantity id="D3059B63FFEAFFA8FC6E42D1FC68FF63" box="[917,995,150,169]" metricMagnitude="3" metricUnit="m" metricValue="1.08" pageId="29" pageNumber="30" unit="m" value="1080.0">1,080 m</quantity>
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) in the Cordillera de
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<collectingRegion id="D639F864FFEAFFA8FB5942D1FA86FF63" box="[1186,1293,150,169]" country="Costa Rica" name="Guanacaste" pageId="29" pageNumber="30">Guanacaste</collectingRegion>
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in northwestern
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<collectingCountry id="6CEA7616FFEAFFA8FCC942F4FC12FF0C" box="[818,921,179,198]" name="Costa Rica" pageId="29" pageNumber="30">Costa Rica</collectingCountry>
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. The other two specimens are workers from Las Pailas, a cloud forest site in Rincon de la Vieja National Park, about
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<quantity id="D3059B63FFEAFFA8FAB04297FA0DFF29" box="[1355,1414,208,227]" metricMagnitude="4" metricUnit="m" metricValue="2.0" pageId="29" pageNumber="30" unit="km" value="20.0">20 km</quantity>
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SE of the first site. One of the workers from Las Pailas was collected in a pitfall trap. We were able to examine the two workers.
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</paragraph>
|
||
<paragraph id="14423686FFEAFFA8FCA9436FFBD7FEBC" blockId="29.[818,1442,149,374]" pageId="29" pageNumber="30">
|
||
The COI results place this species near three species from northern Central America and southern
|
||
<collectingCountry id="6CEA7616FFEAFFA8FB5A4302FB61FE92" box="[1185,1258,325,344]" name="Mexico" pageId="29" pageNumber="30">Mexico</collectingCountry>
|
||
:
|
||
<taxonomicName id="D3FD4D05FFEAFFA8FB094301FA09FE92" box="[1266,1410,325,344]" class="Insecta" family="Formicidae" genus="Rasopone" higherTaxonomySource="GBIF" kingdom="Animalia" order="Hymenoptera" pageId="29" pageNumber="30" phylum="Arthropoda" rank="species" species="politognatha">
|
||
<emphasis id="2689EA94FFEAFFA8FB094301FA09FE92" box="[1266,1410,325,344]" italics="true" pageId="29" pageNumber="30">R. politognatha</emphasis>
|
||
</taxonomicName>
|
||
,
|
||
<emphasis id="2689EA94FFEAFFA8FA764301FA17FE92" box="[1421,1436,326,344]" italics="true" pageId="29" pageNumber="30">R</emphasis>
|
||
. JTL034, and
|
||
<emphasis id="2689EA94FFEAFFA8FC574324FC30FEBF" box="[940,955,355,373]" italics="true" pageId="29" pageNumber="30">R</emphasis>
|
||
. JTL035 (
|
||
<figureCitation id="8CC62A03FFEAFFA8FBE04324FBC4FEBC" box="[1051,1103,355,374]" captionStart="Fig" captionStartId="7.[146,173,1562,1579]" captionTargetBox="[190,1398,146,1525]" captionTargetId="graphics@7.[190,1194,150,1482]" captionTargetPageId="7" captionText="Fig. 3. Phylogenetic relationships among a curated set of COI barcode sequences for Rasopone. Black samples were sequenced for UCEs. Red samples were downloaded from the BOLD database.The tree was inferred using IQ-TREE with the data partitioned by codon position. Black circles on nodes indicate high support, which we define as ≥95% ultrafast bootstrap support and ≥95% SH-like branch support.Terminal names match taxonomic changes proposed in paper and provide useful sample identifiers (e.g., extraction codes [EX#] or BOLD process IDs).A complete,unpruned COI tree is available in Supp Fig. S1 (online only)." figureDoi="http://doi.org/10.5281/zenodo.3826709" httpUri="https://zenodo.org/record/3826709/files/figure.png" pageId="29" pageNumber="30">Fig. 3</figureCitation>
|
||
).
|
||
</paragraph>
|
||
</subSubSection>
|
||
</subSection>
|
||
</treatment>
|
||
</document> |