plazi/treatments-xml
2
0
Fork 0
Code Issues Pull requests Releases Activity
treatments-xml/data/03/D7/2F/03D72F3EFFEBFFF9509DDC362A25FC97.xml
maintenance bc2564723d added 03
2024-06-21 12:22:17 +02:00

343 lines
37 KiB
XML
Raw Blame History

This file contains ambiguous Unicode characters

This file contains Unicode characters that might be confused with other characters. If you think that this is intentional, you can safely ignore this warning. Use the Escape button to reveal them.

<document id="25F83D3EFAB07478885526DC04CAAF36" ID-CLB-Dataset="168313" ID-DOI="10.5852/ejt.2022.840.1941" ID-GBIF-Dataset="6129e7b4-3989-478f-8494-65e0fda5194f" ID-ISSN="2118-9773" ID-Zenodo-Dep="7195216" ID-ZooBank="CE89365D-A3C5-483D-9C80-E5CAECCA740F" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1665683179388" checkinUser="felipe" docAuthor="Križanová, Františka Rataj &amp; Vďačný, Peter" docDate="2022" docId="03D72F3EFFEBFFF9509DDC362A25FC97" docLanguage="en" docName="ejt-840_1-93.pdf" docOrigin="European Journal of Taxonomy 840" docSource="http://dx.doi.org/10.5852/ejt.2022.840.1941" docStyle="DocumentStyle:EF2B578F1D15862ADE45B0C07C620911.14:EJT.2018-.journal_article.type1" docStyleId="EF2B578F1D15862ADE45B0C07C620911" docStyleName="EJT.2018-.journal_article.type1" docStyleVersion="14" docTitle="Chaetonotus (Hystricochaetonotus) slavicus Križanová &amp; Vďačný 2022, sp. nov." docType="treatment" docUuid="9826403E-1298-4889-8E0B-3A19A9EFB3AE" docUuidSource="ZooBank" docVersion="5" lastPageNumber="71" masterDocId="FFEE5746FFAEFFBF5143DD3E2959FFB6" masterDocTitle="A huge undescribed diversity of the subgenus Hystricochaetonotus (Gastrotricha, Chaetonotidae, Chaetonotus) in Central Europe" masterLastPageNumber="93" masterPageNumber="1" pageNumber="70" updateTime="1699407395920" updateUser="ExternalLinkService" zenodo-license-document="CC-BY-4.0" zenodo-license-figures="CC-BY-4.0" zenodo-license-treatments="UNSPECIFIED">
<mods:mods id="87724C0C2E38BF1A7FD37E15370E63BE" xmlns:mods="http://www.loc.gov/mods/v3">
<mods:titleInfo id="34B8661C58230770824C1124B92EEFE4">
<mods:title id="236887B167F84E287389A6B6212B87C2">A huge undescribed diversity of the subgenus Hystricochaetonotus (Gastrotricha, Chaetonotidae, Chaetonotus) in Central Europe</mods:title>
</mods:titleInfo>
<mods:name id="707D01DB2275DD02952339C35A90209E" type="personal">
<mods:role id="FD168C4C2D9675BC42E47690003B5B8E">
<mods:roleTerm id="C58F99FD2A2AC2B128C31BC26C1D8913">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="8C02E26FB0DDBF9AD99134F99DE338BD">Križanová, Františka Rataj</mods:namePart>
<mods:nameIdentifier id="CD61B2B030B0740AAFC699B285C15F22" type="LSID">80CC56E1-1046-4748-97B6-5FA90E95DFA7</mods:nameIdentifier>
<mods:affiliation id="DEB722709D4724A3EC06F85DF4C05BB8">Department of Zoology, Comenius University in Bratislava, 842 15 Bratislava, Slovakia.</mods:affiliation>
<mods:nameIdentifier id="7E4FBACE9396131E1745FAF170590F4B" type="email">krizanova66@uniba.sk</mods:nameIdentifier>
</mods:name>
<mods:name id="1ABA75AC1BB700A0C8ACBF6A6B38C32F" type="personal">
<mods:role id="90073DAE770DE8ED1197F3F8F169D863">
<mods:roleTerm id="219F402E79F5D887FC6663CCAA561540">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="059073D3C8A352BEBCE5A6C42F55EF73">Vďačný, Peter</mods:namePart>
<mods:nameIdentifier id="EC48AF99EEF478336B81F37819A45F51" type="LSID">47A28E80-E04F-40C4-93A3-F7F685C9533A</mods:nameIdentifier>
<mods:affiliation id="8DFB8F63B34C017466ABC84CD71FA0D0">Department of Zoology, Comenius University in Bratislava, 842 15 Bratislava, Slovakia.</mods:affiliation>
<mods:nameIdentifier id="6D442C7634D52C8EC0003D974909C5A6" type="email">peter.vdacny@uniba.sk</mods:nameIdentifier>
</mods:name>
<mods:typeOfResource id="ACB3617A5DA7EFD46D1F58106CAA2367">text</mods:typeOfResource>
<mods:relatedItem id="0B55EACDF1B51F304E549FF7D1AE779E" type="host">
<mods:titleInfo id="DA7335520B8CB4BB7F7196BD6E7B1336">
<mods:title id="0512171128391873D177621C76E67DB1">European Journal of Taxonomy</mods:title>
</mods:titleInfo>
<mods:part id="0FE2FE37FBE0164EBDFC28E03608C804">
<mods:date id="4EBB5C6528E32CFC9F652ADC90183619">2022</mods:date>
<mods:detail id="6ACF35559BA3031B7B5492B4BD82FD44" type="pubDate">
<mods:number id="BB24C135BD271BB236FF5D9504AF9536">2022-10-11</mods:number>
</mods:detail>
<mods:detail id="DF14045AE74D562D9F3679F8B4288031" type="volume">
<mods:number id="80CC171B8543613348526BF6630F7E9C">840</mods:number>
</mods:detail>
<mods:extent id="241C99EC13690B15EC625AEA8A1CD91B" unit="page">
<mods:start id="6C107B23C1E445B0983C6956DB8CCBE3">1</mods:start>
<mods:end id="500EC4EED578C6ECAA559D465CBE24E9">93</mods:end>
</mods:extent>
</mods:part>
</mods:relatedItem>
<mods:location id="4F8DA35D02826A4E607D6CA92864D61D">
<mods:url id="D19833A0E612DB3E73E83663EC8793D2">http://dx.doi.org/10.5852/ejt.2022.840.1941</mods:url>
</mods:location>
<mods:classification id="839FF6C2718B9AE80D248E01ABC0970A">journal article</mods:classification>
<mods:identifier id="B965F38E955027F12BD54560056C4245" type="CLB-Dataset">168313</mods:identifier>
<mods:identifier id="8601AC6EB74CE95378698CA74CB8B6FC" type="DOI">10.5852/ejt.2022.840.1941</mods:identifier>
<mods:identifier id="84310F588A7981225819566702C56106" type="GBIF-Dataset">6129e7b4-3989-478f-8494-65e0fda5194f</mods:identifier>
<mods:identifier id="0A986F34AC9F571105E06AC6DC571C6C" type="ISSN">2118-9773</mods:identifier>
<mods:identifier id="D683674507F47DEF65453A0057B3E184" type="Zenodo-Dep">7195216</mods:identifier>
<mods:identifier id="0E60427A565E92783E1E8BAA0BAED24B" type="ZooBank">CE89365D-A3C5-483D-9C80-E5CAECCA740F</mods:identifier>
</mods:mods>
<treatment id="03D72F3EFFEBFFF9509DDC362A25FC97" ID-DOI="http://doi.org/10.5281/zenodo.7221897" ID-GBIF-Taxon="203115293" ID-Zenodo-Dep="7221897" LSID="urn:lsid:zoobank.org:act:9826403E-1298-4889-8E0B-3A19A9EFB3AE" httpUri="http://treatment.plazi.org/id/03D72F3EFFEBFFF9509DDC362A25FC97" lastPageId="70" lastPageNumber="71" pageId="69" pageNumber="70">
<subSubSection id="C364CDA3FFEBFFFA509DDC362D0CFE92" box="[478,1109,264,292]" pageId="69" pageNumber="70" type="nomenclature">
<paragraph id="8BC19E28FFEBFFFA509DDC362D0CFE92" blockId="69.[371,1217,264,362]" box="[478,1109,264,292]" pageId="69" pageNumber="70">
<heading id="D0892944FFEBFFFA509DDC362D0CFE92" box="[478,1109,264,292]" centered="true" fontSize="11" level="2" pageId="69" pageNumber="70" reason="2">
<taxonomicName id="4C7EE5ABFFEBFFFA509DDC362AAAFE95" ID-CoL="6d94fdb3-ebc3-412a-ad41-b019150c8a6e" authority="Križanová &amp; Vďačný, 2022" authorityName="Križanová &amp; Vďačný" authorityYear="2022" box="[478,1011,264,291]" family="Chaetonotidae" genus="Chaetonotus" kingdom="Animalia" order="Chaetonotida" pageId="69" pageNumber="70" phylum="Gastrotricha" rank="species" species="slavicus" status="sp. nov." subGenus="Hystricochaetonotus">
<emphasis id="B90A423AFFEBFFFA509DDC362AAAFE95" bold="true" box="[478,1011,264,291]" pageId="69" pageNumber="70">
<emphasis id="B90A423AFFEBFFFA509DDC362B2EFE95" bold="true" box="[478,631,264,291]" italics="true" pageId="69" pageNumber="70">Chaetonotus</emphasis>
(
<emphasis id="B90A423AFFEBFFFA53CADC362ADBFE95" bold="true" box="[649,898,264,291]" italics="true" pageId="69" pageNumber="70">Hystricochaetonotus</emphasis>
)
<emphasis id="B90A423AFFEBFFFA52D0DC362AAAFE95" bold="true" box="[915,1011,264,291]" italics="true" pageId="69" pageNumber="70">slavicus</emphasis>
</emphasis>
</taxonomicName>
<taxonomicNameLabel id="A239FF41FFEBFFFA52B8DC342D0CFE92" box="[1019,1109,266,292]" pageId="69" pageNumber="70" rank="species">sp. nov.</taxonomicNameLabel>
</heading>
</paragraph>
</subSubSection>
<subSubSection id="C364CDA3FFEBFFFA5030DC122A65FEDC" pageId="69" pageNumber="70" type="description">
<paragraph id="8BC19E28FFEBFFFA5030DC122D98FEF0" blockId="69.[371,1217,264,362]" box="[371,1217,300,326]" pageId="69" pageNumber="70">
<uri id="FFEF922AFFEBFFFA5030DC122D98FEF0" box="[371,1217,300,326]" pageId="69" pageNumber="70">
urn:lsid:zoobank.org:act:
<uuid id="FFD8A4FDFFEBFFFA53D0DC122D98FEF0" box="[659,1217,300,326]" pageId="69" pageNumber="70">9826403E-1298-4889-8E0B-3A19A9EFB3AE</uuid>
</uri>
</paragraph>
<paragraph id="8BC19E28FFEBFFFA53B4DC712A65FEDC" blockId="69.[371,1217,264,362]" box="[759,828,335,362]" pageId="69" pageNumber="70">
<figureCitation id="134582ADFFEBFFFA53B4DC712A65FEDC" box="[759,828,335,362]" captionStart="Fig" captionStartId="17.[189,232,1852,1878]" captionTargetBox="[189,1395,669,1811]" captionTargetId="figure-137@17.[189,1398,659,1814]" captionTargetPageId="17" captionText="Fig. 9. Phylogenetic subtree based on 18S, 28S, and COI, showing the systematic positions of the nine new species within the Chaetonotus (Hystricochaetonotus) cluster. Arrows mark the same node in the subtree and the inset phylogram. The whole tree is presented in Fig. 8. The Chaetonotus (Hystricochaetonotus) cluster is highlighted in the inset phylogram. ML bootstrap values and posterior probabilities were mapped onto the best ML tree." figureDoi="http://doi.org/10.5281/zenodo.7195242" httpUri="https://zenodo.org/record/7195242/files/figure.png" pageId="69" pageNumber="70">Fig. 9</figureCitation>
</paragraph>
</subSubSection>
<subSubSection id="C364CDA3FFEBFFFA51FEDCAF2B07FC56" pageId="69" pageNumber="70" type="diagnosis">
<paragraph id="8BC19E28FFEBFFFA51FEDCAF28E1FE1D" blockId="69.[189,440,401,427]" box="[189,440,401,427]" pageId="69" pageNumber="70">
<heading id="D0892944FFEBFFFA51FEDCAF28E1FE1D" bold="true" box="[189,440,401,427]" fontSize="11" level="3" pageId="69" pageNumber="70" reason="3">
<emphasis id="B90A423AFFEBFFFA51FEDCAF28E1FE1D" bold="true" box="[189,440,401,427]" pageId="69" pageNumber="70">Molecular diagnosis</emphasis>
</heading>
</paragraph>
<paragraph id="8BC19E28FFEBFFFA51FEDC8128EFFDF5" blockId="69.[189,1399,447,579]" pageId="69" pageNumber="70">
18S rRNA gene: 1548 A. ITS2: 52 G, 107 C, 115 A, 156 C, 171 A. Cytochrome
<emphasis id="B90A423AFFEBFFFA55D0DCFE2DF9FE6F" box="[1171,1184,448,473]" italics="true" pageId="69" pageNumber="70">c</emphasis>
oxidase subunit I (codon ordinal numbers are followed by the corresponding span of nucleotide positions in parentheses): 9 (25‒27) TTC, 65 (193‒195) TTC, 96 (286‒288) CTG, 100 (298‒300) CTG, 143 (427‒429) TCC, 161 (481‒483) GCC.
</paragraph>
<paragraph id="8BC19E28FFEBFFFA51FEDF542B07FD7D" blockId="69.[189,1398,618,715]" pageId="69" pageNumber="70">
Reference molecules are shown in Supp. file 1:
<figureCitation id="134582ADFFEBFFFA5273DF542ACAFD33" box="[816,915,618,645]" captionStart="Fig" captionStartId="16.[189,232,1884,1910]" captionTargetBox="[192,1395,271,1846]" captionTargetId="figure-18@16.[191,1396,265,1847]" captionTargetPageId="16" captionText="Fig. 8. Phylogenetic tree based on 18S, 28S, and COI sequences, showing the systematic positions of the Chaetonotus (Hystricochaetonotus) cluster (arrow). This clade is collapsed in the three, highlighted in the inset phylogram, and presented in detail in Fig. 9. ML bootstrap values and posterior probabilities were mapped onto the best ML tree." figureDoi="http://doi.org/10.5281/zenodo.7195238" httpUri="https://zenodo.org/record/7195238/files/figure.png" pageId="69" pageNumber="70">Figs S8</figureCitation>
, S
<figureCitation id="134582ADFFEBFFFA52FBDF552D49FD33" box="[952,1040,619,645]" captionStart="Fig" captionStartId="22.[189,232,1920,1946]" captionTargetBox="[205,1382,265,1883]" captionTargetId="figure-17@22.[205,1382,265,1883]" captionTargetPageId="22" captionText="Fig. 12. Chaetonotus (Hystricochaetonotus) mirabilis sp. nov., holotype (CU-FNS-11-09-19/HO), differential interference contrast. A‒B. Optical sections showing the general body organization. C. Lateral overview. Arrows in (B) and (C) mark the lateral denticle of spines. Scale bars = 30 µm." figureDoi="http://doi.org/10.5281/zenodo.7195250" httpUri="https://zenodo.org/record/7195250/files/figure.png" pageId="69" pageNumber="70">12B, S</figureCitation>
<figureCitation id="134582ADFFEBFFFA5553DF552D68FD33" box="[1040,1073,619,645]" captionStart="Fig" captionStartId="36.[189,231,1886,1912]" captionTargetBox="[218,1370,265,1849]" captionTargetId="figure-17@36.[218,1370,265,1849]" captionTargetPageId="36" captionText="Fig. 20. Chaetonotus (Hystricochaetonotus) optabilis sp. nov., differential interference contrast.A. Paratype (CU-FNS-05-03-20-3/PA-2). B–C. Holotype (CU-FNS-05-03-20-1/HO). A. Overview showing the general body organization. Asterisks mark the beginning of the ventral ciliary bands. B‒C. Surface views, showing the head and trunk scale patterns. Scale bars: A = 30 µm; B = 5 µm; C = 10 µm." figureDoi="http://doi.org/10.5281/zenodo.7195272" httpUri="https://zenodo.org/record/7195272/files/figure.png" pageId="69" pageNumber="70">20</figureCitation>
. All diagnostic molecular autapomorphies are marked by arrows. Reference alignments with corresponding nucleotide positions are in Supp. file 1: Alignments 1‒4.
</paragraph>
<paragraph id="8BC19E28FFEBFFFA51FEDFCC2B07FC56" blockId="69.[188,1399,754,992]" pageId="69" pageNumber="70">
The
<emphasis id="B90A423AFFEBFFFA51B5DFCD2857FCBA" box="[246,270,755,780]" italics="true" pageId="69" pageNumber="70">p-</emphasis>
distance from species described in the present study is 0.05‒4.38% in 18S, 5.88‒31.02% in ITS2, 0.52‒9.78% in 28S, and 7.85‒13.59% in COI. There are 1‒16 CBCs (except for
<emphasis id="B90A423AFFEBFFFA55F1DE2B2D82FC99" box="[1202,1243,789,815]" italics="true" pageId="69" pageNumber="70">Ch.</emphasis>
(
<emphasis id="B90A423AFFEBFFFA55AFDE282C58FC99" box="[1260,1281,790,815]" italics="true" pageId="69" pageNumber="70">H</emphasis>
).
<taxonomicName id="4C7EE5ABFFEBFFFA545ADE282C2FFC99" authority="Križanová &amp; Vďačný, 2022" authorityName="Križanová &amp; Vďačný" authorityYear="2022" box="[1305,1398,790,815]" family="Chaetonotidae" genus="Chaetonotus" kingdom="Animalia" order="Chaetonotida" pageId="69" pageNumber="70" phylum="Gastrotricha" rank="species" species="arcanus" status="sp. nov.">
<emphasis id="B90A423AFFEBFFFA545ADE282C2FFC99" box="[1305,1398,790,815]" italics="true" pageId="69" pageNumber="70">arcanus</emphasis>
</taxonomicName>
<taxonomicNameLabel id="A239FF41FFEBFFFA51FEDE072844FCE5" box="[189,285,825,851]" pageId="69" pageNumber="70" rank="species">sp. nov.</taxonomicNameLabel>
,
<emphasis id="B90A423AFFEBFFFA506FDE07280CFCE5" box="[300,341,825,851]" italics="true" pageId="69" pageNumber="70">Ch.</emphasis>
(
<emphasis id="B90A423AFFEBFFFA5029DE072826FCE4" box="[362,383,825,850]" italics="true" pageId="69" pageNumber="70">H</emphasis>
).
<taxonomicName id="4C7EE5ABFFEBFFFA50D9DE072887FCE4" authority="Križanová &amp; Vďačný, 2022" authorityName="Križanová &amp; Vďačný" authorityYear="2022" box="[410,478,825,850]" family="Chaetonotidae" genus="Chaetonotus" kingdom="Animalia" order="Chaetonotida" pageId="69" pageNumber="70" phylum="Gastrotricha" rank="species" species="iratus" status="sp. nov.">
<emphasis id="B90A423AFFEBFFFA50D9DE072887FCE4" box="[410,478,825,850]" italics="true" pageId="69" pageNumber="70">iratus</emphasis>
</taxonomicName>
<taxonomicNameLabel id="A239FF41FFEBFFFA50AADE072B10FCE5" box="[489,585,825,851]" pageId="69" pageNumber="70" rank="species">sp. nov.</taxonomicNameLabel>
, and
<emphasis id="B90A423AFFEBFFFA53CEDE072BEFFCE5" box="[653,694,825,851]" italics="true" pageId="69" pageNumber="70">Ch.</emphasis>
(
<emphasis id="B90A423AFFEBFFFA5389DE072B86FCE4" box="[714,735,825,850]" italics="true" pageId="69" pageNumber="70">H</emphasis>
).
<taxonomicName id="4C7EE5ABFFEBFFFA53B8DE072A60FCE5" authority="Križanová &amp; Vďačný, 2022" authorityName="Križanová &amp; Vďačný" authorityYear="2022" box="[763,825,825,851]" family="Chaetonotidae" genus="Chaetonotus" kingdom="Animalia" order="Chaetonotida" pageId="69" pageNumber="70" phylum="Gastrotricha" rank="species" species="luxus" status="sp. nov.">
<emphasis id="B90A423AFFEBFFFA53B8DE072A60FCE5" box="[763,825,825,851]" italics="true" pageId="69" pageNumber="70">luxus</emphasis>
</taxonomicName>
<taxonomicNameLabel id="A239FF41FFEBFFFA5200DE072AFAFCE5" box="[835,931,825,851]" pageId="69" pageNumber="70" rank="species">sp. nov.</taxonomicNameLabel>
, where there are no CBCs) in the 18S rRNA molecule, 1‒3 CBCs in the ITS2 molecule (except for
<emphasis id="B90A423AFFEBFFFA52C7DE622AF4FCC0" box="[900,941,860,886]" italics="true" pageId="69" pageNumber="70">Ch.</emphasis>
(
<emphasis id="B90A423AFFEBFFFA52FDDE632A8AFCC0" box="[958,979,861,886]" italics="true" pageId="69" pageNumber="70">H</emphasis>
).
<taxonomicName id="4C7EE5ABFFEBFFFA52A9DE632D1EFCC0" authority="Križanová &amp; Vďačný, 2022" authorityName="Križanová &amp; Vďačný" authorityYear="2022" box="[1002,1095,861,886]" family="Chaetonotidae" genus="Chaetonotus" kingdom="Animalia" order="Chaetonotida" pageId="69" pageNumber="70" phylum="Gastrotricha" rank="species" species="arcanus" status="sp. nov.">
<emphasis id="B90A423AFFEBFFFA52A9DE632D1EFCC0" box="[1002,1095,861,886]" italics="true" pageId="69" pageNumber="70">arcanus</emphasis>
</taxonomicName>
<taxonomicNameLabel id="A239FF41FFEBFFFA550DDE622DF2FCC0" box="[1102,1195,860,886]" pageId="69" pageNumber="70" rank="species">sp. nov.</taxonomicNameLabel>
,
<emphasis id="B90A423AFFEBFFFA55F5DE622DB9FCC0" box="[1206,1248,860,886]" italics="true" pageId="69" pageNumber="70">Ch.</emphasis>
(
<emphasis id="B90A423AFFEBFFFA55B3DE632C5CFCC0" box="[1264,1285,861,886]" italics="true" pageId="69" pageNumber="70">H</emphasis>
).
<taxonomicName id="4C7EE5ABFFEBFFFA545EDE622C2EFCC0" authority="Križanová &amp; Vďačný, 2022" authorityName="Križanová &amp; Vďačný" authorityYear="2022" box="[1309,1399,860,886]" family="Chaetonotidae" genus="Chaetonotus" kingdom="Animalia" order="Chaetonotida" pageId="69" pageNumber="70" phylum="Gastrotricha" rank="species" species="gulosus" status="sp. nov.">
<emphasis id="B90A423AFFEBFFFA545EDE622C2EFCC0" box="[1309,1399,860,886]" italics="true" pageId="69" pageNumber="70">gulosus</emphasis>
</taxonomicName>
<taxonomicNameLabel id="A239FF41FFEBFFFA51FFDEBE2840FC2C" box="[188,281,896,922]" pageId="69" pageNumber="70" rank="species">sp. nov.</taxonomicNameLabel>
, and
<emphasis id="B90A423AFFEBFFFA5015DE412826FC2F" box="[342,383,895,921]" italics="true" pageId="69" pageNumber="70">Ch.</emphasis>
(
<emphasis id="B90A423AFFEBFFFA50D3DEBE28FCFC2F" box="[400,421,896,921]" italics="true" pageId="69" pageNumber="70">H</emphasis>
).
<taxonomicName id="4C7EE5ABFFEBFFFA50FEDE4128A2FC2F" authority="Križanová &amp; Vďačný, 2022" authorityName="Križanová &amp; Vďačný" authorityYear="2022" box="[445,507,895,921]" family="Chaetonotidae" genus="Chaetonotus" kingdom="Animalia" order="Chaetonotida" pageId="69" pageNumber="70" phylum="Gastrotricha" rank="species" species="luxus" status="sp. nov.">
<emphasis id="B90A423AFFEBFFFA50FEDE4128A2FC2F" box="[445,507,895,921]" italics="true" pageId="69" pageNumber="70">luxus</emphasis>
</taxonomicName>
<taxonomicNameLabel id="A239FF41FFEBFFFA5342DEBE2B07FC2C" box="[513,606,896,922]" pageId="69" pageNumber="70" rank="species">sp. nov.</taxonomicNameLabel>
, where there are no CBCs), and 2‒18 CBCs in the first two domains of the 28S rRNA gene (except for
<emphasis id="B90A423AFFEBFFFA530CDE9C2B21FC0A" box="[591,632,930,956]" italics="true" pageId="69" pageNumber="70">Ch.</emphasis>
(
<emphasis id="B90A423AFFEBFFFA53CADE9D2BC7FC0A" box="[649,670,931,956]" italics="true" pageId="69" pageNumber="70">H</emphasis>
).
<taxonomicName id="4C7EE5ABFFEBFFFA53F5DE9D2A4AFC0A" authority="Križanová &amp; Vďačný, 2022" authorityName="Križanová &amp; Vďačný" authorityYear="2022" box="[694,787,931,956]" family="Chaetonotidae" genus="Chaetonotus" kingdom="Animalia" order="Chaetonotida" pageId="69" pageNumber="70" phylum="Gastrotricha" rank="species" species="arcanus" status="sp. nov.">
<emphasis id="B90A423AFFEBFFFA53F5DE9D2A4AFC0A" box="[694,787,931,956]" italics="true" pageId="69" pageNumber="70">arcanus</emphasis>
</taxonomicName>
<taxonomicNameLabel id="A239FF41FFEBFFFA5258DE9D2A21FC0B" box="[795,888,931,957]" pageId="69" pageNumber="70" rank="species">sp. nov.</taxonomicNameLabel>
,
<emphasis id="B90A423AFFEBFFFA52C0DE9C2AF4FC0A" box="[899,941,930,956]" italics="true" pageId="69" pageNumber="70">Ch.</emphasis>
(
<emphasis id="B90A423AFFEBFFFA52FDDE9D2A8AFC0A" box="[958,979,931,956]" italics="true" pageId="69" pageNumber="70">H</emphasis>
).
<taxonomicName id="4C7EE5ABFFEBFFFA52A8DE9D2D76FC0A" authority="Križanová &amp; Vďačný, 2022" authorityName="Križanová &amp; Vďačný" authorityYear="2022" box="[1003,1071,931,956]" family="Chaetonotidae" genus="Chaetonotus" kingdom="Animalia" order="Chaetonotida" pageId="69" pageNumber="70" phylum="Gastrotricha" rank="species" species="iratus" status="sp. nov.">
<emphasis id="B90A423AFFEBFFFA52A8DE9D2D76FC0A" box="[1003,1071,931,956]" italics="true" pageId="69" pageNumber="70">iratus</emphasis>
</taxonomicName>
<taxonomicNameLabel id="A239FF41FFEBFFFA5574DE9D2DCDFC0B" box="[1079,1172,931,957]" pageId="69" pageNumber="70" rank="species">sp. nov.</taxonomicNameLabel>
, and
<emphasis id="B90A423AFFEBFFFA5592DE9C2DA3FC0A" box="[1233,1274,930,956]" italics="true" pageId="69" pageNumber="70">Ch.</emphasis>
(
<emphasis id="B90A423AFFEBFFFA5448DE9D2C79FC0A" box="[1291,1312,931,956]" italics="true" pageId="69" pageNumber="70">H</emphasis>
).
<taxonomicName id="4C7EE5ABFFEBFFFA547BDE9C2C2FFC0A" authority="Križanová &amp; Vďačný, 2022" authorityName="Križanová &amp; Vďačný" authorityYear="2022" box="[1336,1398,930,956]" family="Chaetonotidae" genus="Chaetonotus" kingdom="Animalia" order="Chaetonotida" pageId="69" pageNumber="70" phylum="Gastrotricha" rank="species" species="luxus" status="sp. nov.">
<emphasis id="B90A423AFFEBFFFA547BDE9C2C2FFC0A" box="[1336,1398,930,956]" italics="true" pageId="69" pageNumber="70">luxus</emphasis>
</taxonomicName>
<taxonomicNameLabel id="A239FF41FFEBFFFA51FEDEF82843FC56" box="[189,282,966,992]" pageId="69" pageNumber="70" rank="species">sp. nov.</taxonomicNameLabel>
, where there are no CBCs).
</paragraph>
</subSubSection>
<subSubSection id="C364CDA3FFEBFFFA51FED9392A2AFBC5" pageId="69" pageNumber="70" type="etymology">
<paragraph id="8BC19E28FFEBFFFA51FED939281DFB97" blockId="69.[189,324,1031,1057]" box="[189,324,1031,1057]" pageId="69" pageNumber="70">
<heading id="D0892944FFEBFFFA51FED939281DFB97" bold="true" box="[189,324,1031,1057]" fontSize="11" level="3" pageId="69" pageNumber="70" reason="3">
<emphasis id="B90A423AFFEBFFFA51FED939281DFB97" bold="true" box="[189,324,1031,1057]" pageId="69" pageNumber="70">Etymology</emphasis>
</heading>
</paragraph>
<paragraph id="8BC19E28FFEBFFFA51FED90B2A2AFBC5" blockId="69.[189,1399,1077,1139]" pageId="69" pageNumber="70">
The Latin adjective ‘
<emphasis id="B90A423AFFEBFFFA50ECD90B28AAFBF9" box="[431,499,1077,1103]" italics="true" pageId="69" pageNumber="70">slavic</emphasis>
·
<emphasis id="B90A423AFFEBFFFA50BED9082B4EFBF9" box="[509,535,1078,1103]" italics="true" pageId="69" pageNumber="70">us</emphasis>
, -
<emphasis id="B90A423AFFEBFFFA536CD9082B67FBF9" box="[559,574,1078,1103]" italics="true" pageId="69" pageNumber="70">a</emphasis>
, -
<emphasis id="B90A423AFFEBFFFA5316D9082B20FBF9" box="[597,633,1078,1103]" italics="true" pageId="69" pageNumber="70">um</emphasis>
’ [m, f, n] (‘Slavic’) refers to the
<typeStatus id="54C5208AFFEBFFFA52B1D9082D7CFBE6" box="[1010,1061,1078,1104]" pageId="69" pageNumber="70">type</typeStatus>
locality (Devín castle) of the new species, which is an important place in Slovak history.
</paragraph>
</subSubSection>
<subSubSection id="C364CDA3FFEBFFF951FED9A42A1DFE21" lastPageId="70" lastPageNumber="71" pageId="69" pageNumber="70" type="materials_examined">
<paragraph id="8BC19E28FFEBFFFA51FED9A428F3FB02" blockId="69.[189,426,1178,1204]" box="[189,426,1178,1204]" pageId="69" pageNumber="70">
<heading id="D0892944FFEBFFFA51FED9A428F3FB02" bold="true" box="[189,426,1178,1204]" fontSize="11" level="3" pageId="69" pageNumber="70" reason="3">
<emphasis id="B90A423AFFEBFFFA51FED9A428F3FB02" bold="true" box="[189,426,1178,1204]" pageId="69" pageNumber="70">Material examined</emphasis>
</heading>
</paragraph>
<paragraph id="8BC19E28FFEBFFFA51A9D9F72833FAFB" blockId="69.[189,1399,1225,1357]" pageId="69" pageNumber="70">
<materialsCitation id="3B169475FFEBFFFA51A9D9F72833FAFB" ID-GBIF-Occurrence="3926158311" country="Slovakia" county="Podunajska" latitude="48.174835" location="Devin" longLatPrecision="1" longitude="16.976612" municipality="Bratislava" pageId="69" pageNumber="70" specimenCount="1" typeStatus="holotype">
<emphasis id="B90A423AFFEBFFFA51A9D9F72805FB55" bold="true" box="[234,348,1225,1251]" pageId="69" pageNumber="70">
<typeStatus id="54C5208AFFEBFFFA51A9D9F72805FB55" box="[234,348,1225,1251]" pageId="69" pageNumber="70" type="holotype">Holotype</typeStatus>
</emphasis>
<collectingCountry id="F369DEB8FFEBFFFA51FED9D22817FAB0" box="[189,334,1260,1286]" name="Slovakia" pageId="69" pageNumber="70">SLOVAKIA</collectingCountry>
•
<specimenCount id="9D7855A1FFEBFFFA5031D9D228F4FAB0" box="[370,429,1260,1286]" pageId="69" pageNumber="70" type="adult">adult</specimenCount>
(the specimen was destroyed during DNA extraction);
<locationDeviation id="9A73870AFFEBFFFA5521D9D22BDFFA9C" pageId="69" pageNumber="70">temporary pond in the floodplain area of the River Morava</locationDeviation>
,
<location id="8EA1C8F3FFEBFFFA53DBD8312BBAFA9F" LSID="urn:lsid:plazi:treatment:03D72F3EFFEBFFF9509DDC362A25FC97:8EA1C8F3FFEBFFFA53DBD8312BBAFA9F" box="[664,739,1295,1321]" country="Slovakia" county="Podunajska" latitude="48.174835" longLatPrecision="1" longitude="16.976612" municipality="Bratislava" name="Devin" pageId="69" pageNumber="70">Devín</location>
,
<collectingMunicipality id="6BA50452FFEBFFFA53B6D8312A36FA9F" box="[757,879,1295,1321]" pageId="69" pageNumber="70">Bratislava</collectingMunicipality>
,
<collectingCounty id="62A0E6A4FFEBFFFA52C2D8312D51FA9F" box="[897,1032,1295,1321]" pageId="69" pageNumber="70">Podunajská</collectingCounty>
rovina plain;
<geoCoordinate id="EE4AF8EFFFEBFFFA5583D8332C2BFA9C" box="[1216,1394,1293,1322]" degrees="48" direction="north" minutes="10" orientation="latitude" pageId="69" pageNumber="70" precision="1" seconds="29.4" value="48.174835">48°10′29.4″ N</geoCoordinate>
,
<geoCoordinate id="EE4AF8EFFFEBFFFA51FED80F283FFAFB" box="[189,358,1329,1357]" degrees="16" direction="east" minutes="58" orientation="longitude" pageId="69" pageNumber="70" precision="1" seconds="35.8" value="16.976612">16°58′35.8″ E</geoCoordinate>
.
</materialsCitation>
</paragraph>
<paragraph id="8BC19E28FFEBFFFA51A9D84A280CFA62" blockId="69.[189,1398,1396,1492]" pageId="69" pageNumber="70">
<materialsCitation id="3B169475FFEBFFFA51A9D84A280BFA62" ID-GBIF-Occurrence="3926158314" country="Slovakia" county="Podunajska" latitude="48.174835" location="SLOVAKIA" longLatPrecision="1" longitude="16.976612" municipality="Bratislava" pageId="69" pageNumber="70" specimenCount="3" specimenCount-adult="3" typeStatus="paratype">
<emphasis id="B90A423AFFEBFFFA51A9D84A283EFA38" bold="true" box="[234,359,1396,1422]" pageId="69" pageNumber="70">
<typeStatus id="54C5208AFFEBFFFA51A9D84A283EFA38" box="[234,359,1396,1422]" pageId="69" pageNumber="70" type="paratype">Paratypes</typeStatus>
</emphasis>
<collectingCountry id="F369DEB8FFEBFFFA51FED8A92817FA07" box="[189,334,1431,1457]" name="Slovakia" pageId="69" pageNumber="70">SLOVAKIA</collectingCountry>
•
<specimenCount id="9D7855A1FFEBFFFA5024D8A9289DFA07" box="[359,452,1431,1457]" pageId="69" pageNumber="70" type="adult">3 adults</specimenCount>
(the specimens were destroyed during DNA extraction); same collection data as for holotype
</materialsCitation>
.
</paragraph>
<paragraph id="8BC19E28FFEBFFFA51FED8C52BA4F98F" blockId="69.[189,1399,1531,1593]" pageId="69" pageNumber="70">
Photomicrographs of the
<typeStatus id="54C5208AFFEBFFFA50A4D8C52B17F9A3" box="[487,590,1531,1557]" pageId="69" pageNumber="70" type="holotype">holotype</typeStatus>
are available at the Department of Zoology, Comenius University in Bratislava at https://fns.uniba.sk/en/gastrotricha/.
</paragraph>
<paragraph id="8BC19E28FFEBFFFA51FEDB5E2835F9CC" blockId="69.[189,364,1632,1658]" box="[189,364,1632,1658]" pageId="69" pageNumber="70">
<heading id="D0892944FFEBFFFA51FEDB5E2835F9CC" bold="true" box="[189,364,1632,1658]" fontSize="11" level="3" pageId="69" pageNumber="70" reason="3">
<emphasis id="B90A423AFFEBFFFA51FEDB5E2835F9CC" bold="true" box="[189,364,1632,1658]" pageId="69" pageNumber="70">Type material</emphasis>
</heading>
</paragraph>
<paragraph id="8BC19E28FFEBFFFA51FEDBB12DC4F97B" blockId="69.[189,1398,1679,1741]" pageId="69" pageNumber="70">
A DNA sample of the
<typeStatus id="54C5208AFFEBFFFA508EDBB12B6DF91F" box="[461,564,1679,1705]" pageId="69" pageNumber="70" type="holotype">holotype</typeStatus>
specimen DB 40 has been deposited in the Natural History Museum, Vajanského nábrežie 2, 810 06 Bratislava,
<collectingCountry id="F369DEB8FFEBFFFA53F2DB8C2A41F97A" box="[689,792,1714,1740]" name="Slovakia" pageId="69" pageNumber="70">Slovakia</collectingCountry>
(ID Collection Code 01427570).
</paragraph>
<paragraph id="8BC19E28FFEBFFFA51FEDBCD2804F8BB" blockId="69.[189,349,1779,1805]" box="[189,349,1779,1805]" pageId="69" pageNumber="70">
<heading id="D0892944FFEBFFFA51FEDBCD2804F8BB" bold="true" box="[189,349,1779,1805]" fontSize="11" level="3" pageId="69" pageNumber="70" reason="3">
<emphasis id="B90A423AFFEBFFFA51FEDBCD2804F8BB" bold="true" box="[189,349,1779,1805]" pageId="69" pageNumber="70">Type locality</emphasis>
</heading>
</paragraph>
<paragraph id="8BC19E28FFEBFFFA51FEDA1C2D68F8E9" blockId="69.[189,1398,1826,1887]" pageId="69" pageNumber="70">
Ephemeral pond in the floodplain area of the River Morava near the foothill of the Devín castle, Bratislava, Podunajská rovina plain,
<collectingCountry id="F369DEB8FFEBFFFA532EDA7B2B8EF8E9" box="[621,727,1861,1887]" name="Slovakia" pageId="69" pageNumber="70">Slovakia</collectingCountry>
,
<geoCoordinate id="EE4AF8EFFFEBFFFA53A1DA7D2ADDF8E9" box="[738,900,1859,1887]" degrees="48" direction="north" minutes="10" orientation="latitude" pageId="69" pageNumber="70" precision="1" seconds="29.4" value="48.174835">48°10′29.4″N</geoCoordinate>
<geoCoordinate id="EE4AF8EFFFEBFFFA52C8DA7D2D74F8E9" box="[907,1069,1859,1887]" degrees="16" direction="east" minutes="58" orientation="longitude" pageId="69" pageNumber="70" precision="1" seconds="35.8" value="16.976612">16°58′35.8″E</geoCoordinate>
.
</paragraph>
<paragraph id="8BC19E28FFE8FFF951FEDC3628D8FE95" blockId="70.[189,385,264,291]" box="[189,385,264,291]" pageId="70" pageNumber="71">
<heading id="D0892944FFE8FFF951FEDC3628D8FE95" bold="true" box="[189,385,264,291]" fontSize="11" level="3" pageId="70" pageNumber="71" reason="3">
<emphasis id="B90A423AFFE8FFF951FEDC3628D8FE95" bold="true" box="[189,385,264,291]" pageId="70" pageNumber="71">Gene sequences</emphasis>
</heading>
</paragraph>
<paragraph id="8BC19E28FFE8FFF951FEDC092A1DFE21" blockId="70.[189,1399,311,408]" pageId="70" pageNumber="71">
The nuclear 18S and
<collectionCode id="ED6F06EDFFE8FFF950EEDC092882FEE4" box="[429,475,311,338]" pageId="70" pageNumber="71">ITS</collectionCode>
1-5.8S-ITS2-28S rDNA sequences as well as the mitochondrial COI sequence of the
<typeStatus id="54C5208AFFE8FFF951ABDC642816FEC2" box="[232,335,346,372]" pageId="70" pageNumber="71" type="holotype">holotype</typeStatus>
specimen DB 40 have been deposited in GenBank under the following accession numbers:
<accessionNumber id="942D03CBFFE8FFF951FEDC402811FE2E" box="[189,328,382,408]" httpUri="https://www.ncbi.nlm.nih.gov/nuccore/OM421724" pageId="70" pageNumber="71" type="GenBank">
<collectionCode id="ED6F06EDFFE8FFF951FEDC4029B4FE2E" box="[189,237,382,408]" country="New Zealand" name="Otago Museum" pageId="70" pageNumber="71">OM</collectionCode>
421724
</accessionNumber>
,
<accessionNumber id="942D03CBFFE8FFF95010DC402884FE2E" box="[339,477,382,408]" httpUri="https://www.ncbi.nlm.nih.gov/nuccore/OM421700" pageId="70" pageNumber="71" type="GenBank">
<collectionCode id="ED6F06EDFFE8FFF95010DC4028DAFE2E" box="[339,387,382,408]" country="New Zealand" name="Otago Museum" pageId="70" pageNumber="71">OM</collectionCode>
421700
</accessionNumber>
, and
<accessionNumber id="942D03CBFFE8FFF95358DC402BFCFE2E" box="[539,677,382,408]" httpUri="https://www.ncbi.nlm.nih.gov/nuccore/OM424079" pageId="70" pageNumber="71" type="GenBank">
<collectionCode id="ED6F06EDFFE8FFF95358DC402B12FE2E" box="[539,587,382,408]" country="New Zealand" name="Otago Museum" pageId="70" pageNumber="71">OM</collectionCode>
424079
</accessionNumber>
, respectively.
</paragraph>
</subSubSection>
<subSubSection id="C364CDA3FFE8FFF951FEDC812A25FC97" pageId="70" pageNumber="71" type="discussion">
<paragraph id="8BC19E28FFE8FFF951FEDC812876FE6F" blockId="70.[189,303,447,473]" box="[189,303,447,473]" pageId="70" pageNumber="71">
<heading id="D0892944FFE8FFF951FEDC812876FE6F" bold="true" box="[189,303,447,473]" fontSize="11" level="3" pageId="70" pageNumber="71" reason="3">
<emphasis id="B90A423AFFE8FFF951FEDC812876FE6F" bold="true" box="[189,303,447,473]" pageId="70" pageNumber="71">Remarks</emphasis>
</heading>
</paragraph>
<paragraph id="8BC19E28FFE8FFF951FEDCD32A25FC97" blockId="70.[189,1399,493,801]" pageId="70" pageNumber="71">
Unfortunately, all our attempts for thorough morphological investigations of this species failed. Without a name,
<taxonomicName id="4C7EE5ABFFE8FFF95058DF2F28B8FD9D" authority="Križanová &amp; Vďačný, 2022" authorityName="Križanová &amp; Vďačný" authorityYear="2022" box="[283,481,529,555]" family="Chaetonotidae" genus="Chaetonotus" kingdom="Animalia" order="Chaetonotida" pageId="70" pageNumber="71" phylum="Gastrotricha" rank="species" species="slavicus" status="sp. nov." subGenus="Hystricochaetonotus">
<emphasis id="B90A423AFFE8FFF95058DF2F281CFD9D" box="[283,325,529,555]" italics="true" pageId="70" pageNumber="71">Ch.</emphasis>
(
<emphasis id="B90A423AFFE8FFF95015DF2F282AFD9C" box="[342,371,529,554]" italics="true" pageId="70" pageNumber="71">H.</emphasis>
)
<emphasis id="B90A423AFFE8FFF950C1DF2F28B8FD9D" box="[386,481,529,555]" italics="true" pageId="70" pageNumber="71">slavicus</emphasis>
</taxonomicName>
<taxonomicNameLabel id="A239FF41FFE8FFF950A5DF2F2B19FD9D" box="[486,576,529,555]" pageId="70" pageNumber="71" rank="species">sp. nov.</taxonomicNameLabel>
would be nothing but a label and nucleotide sequences in the GenBank database. However, this entity can be clearly separated from other species by the combination of 18S, ITS region, 28S, and COI sequences. Moreover, it represents a distinct lineage in multi-gene phylogenies (
<figureCitation id="134582ADFFE8FFF95185DF442854FD22" box="[198,269,634,660]" captionStart="Fig" captionStartId="17.[189,232,1852,1878]" captionTargetBox="[189,1395,669,1811]" captionTargetId="figure-137@17.[189,1398,659,1814]" captionTargetPageId="17" captionText="Fig. 9. Phylogenetic subtree based on 18S, 28S, and COI, showing the systematic positions of the nine new species within the Chaetonotus (Hystricochaetonotus) cluster. Arrows mark the same node in the subtree and the inset phylogram. The whole tree is presented in Fig. 8. The Chaetonotus (Hystricochaetonotus) cluster is highlighted in the inset phylogram. ML bootstrap values and posterior probabilities were mapped onto the best ML tree." figureDoi="http://doi.org/10.5281/zenodo.7195242" httpUri="https://zenodo.org/record/7195242/files/figure.png" pageId="70" pageNumber="71">Fig. 9</figureCitation>
). As
<bibRefCitation id="EFEFE3D9FFE8FFF9500BDF4428B8FD22" author="ICZN" box="[328,481,634,660]" pageId="70" pageNumber="71" refId="ref42392" refString="ICZN 1999. International Code of Zoological Nomenclature. Fourth Edition. International Trust for Zoological Nomenclature, London. Available from https: // www. iczn. org / the-code / the-code-online / [accessed 1 Apr. 2022]." type="url" year="1999">ICZN (1999)</bibRefCitation>
allows that any part of an animal is eligible to be a name-bearing
<typeStatus id="54C5208AFFE8FFF955A1DF452C4CFD23" box="[1250,1301,635,661]" pageId="70" pageNumber="71">type</typeStatus>
(Article 72.5.1), we interpret the isolated DNA as a part of an animal and use it as
<typeStatus id="54C5208AFFE8FFF9555FDFA02D16FD0E" box="[1052,1103,670,696]" pageId="70" pageNumber="71">type</typeStatus>
material. This strategy is also used in protists whose names are governed by the Zoological Code (e.g.,
<bibRefCitation id="EFEFE3D9FFE8FFF95503DFFF2DA6FD6D" author="Lynn D. H. &amp; Doerder F. P. &amp; Gillis P. L. &amp; Prosser R. S." box="[1088,1279,705,731]" pageId="70" pageNumber="71" pagination="125 - 136" refId="ref43690" refString="Lynn D. H., Doerder F. P., Gillis P. L. &amp; Prosser R. S. 2018. Tetrahymena glochidiophila n. sp., a new species of Tetrahymena (Ciliophora) that causes mortality to glochidia larvae of freshwater mussels (Bivalvia). Diseases of Aquatic Organisms 127: 125 - 136. https: // doi. org / 10.3354 / dao 03188" type="journal article" year="2018">
Lynn
<emphasis id="B90A423AFFE8FFF955C0DFFF2DE5FD6D" box="[1155,1212,705,731]" italics="true" pageId="70" pageNumber="71">et al.</emphasis>
2018
</bibRefCitation>
;
<bibRefCitation id="EFEFE3D9FFE8FFF95449DFFF283FFD48" author="Pecina L. &amp; Vdacny P." pageId="70" pageNumber="71" pagination="1072 - 1102" refId="ref44051" refString="Pecina L. &amp; Vdacny P. 2022. DNA barcoding and coalescent-based delimitation of endosymbiotic clevelandellid ciliates (Ciliophora: Clevelandellida): a shift to molecular taxonomy in the inventory of ciliate diversity in panesthiine cockroaches. Zoological Journal of the Linnean Society 194 (4): 1072 - 1102. https: // doi. org / 10.1093 / zoolinnean / zlab 063" type="journal article" year="2022">Pecina &amp; Vďačný 2022</bibRefCitation>
). It is important to mention that the principle of priority applies even if any part of an animal is named before the whole animal (Article 23.3.2.1).
</paragraph>
</subSubSection>
</treatment>
</document>
Reference in a new issue View git blame Copy permalink