163 lines
14 KiB
XML
163 lines
14 KiB
XML
<document id="A7FEFFF386795FE89A76F16A7D4766E5" ID-DOI="10.1099/ijsem.0.003847" ID-GBIF-Dataset="8378fda1-7808-476f-9c03-b551204b03e6" ID-ISSN="1466-5034" ID-Zenodo-Dep="3745040" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1586370151274" checkinUser="felipe" docAuthor="Zhang, Gaiyun, Wang, Lina, Xie, Fuquan, Pei, Shengxiang & Jiang, Li" docDate="2020" docId="03ED97173551FFC6FCD2FF4565422343" docLanguage="en" docName="IntJouSysEvoMicro.70.923-928.pdf.imf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 70 (2)" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Nesterenkonia salmonea Zhang, Wang, Xie, Pei & Jiang, 2020, SP. NOV." docType="treatment" docVersion="12" lastPageNumber="926" masterDocId="FFD4EF6F3552FFC5FFEEFFFD6109263B" masterDocTitle="Nesterenkonia salmonea sp. nov. and Nesterenkonia sphaerica sp. nov., isolated from the Southern Atlantic Ocean" masterLastPageNumber="928" masterPageNumber="923" pageNumber="926" updateTime="1698736592305" updateUser="plazi" zenodo-license-document="CC-BY-4.0">
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<mods:titleInfo id="985570C011460594F591F868CB2BFF96">
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<mods:title id="26EE45C16FC8FEAAA4D56B37F2182A65">Nesterenkonia salmonea sp. nov. and Nesterenkonia sphaerica sp. nov., isolated from the Southern Atlantic Ocean</mods:title>
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<mods:name id="87C06BFEA5032E5534612B6BDFF1FD9D" type="personal">
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<mods:namePart id="FC36C84525F8160FED978840988F4BEE">Zhang, Gaiyun</mods:namePart>
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<mods:roleTerm id="47A782BE954C2BCF0A30195A4507C4D0">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="3A2F2EC456D7207602A88D48DF597BCB">Wang, Lina</mods:namePart>
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</mods:name>
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<mods:name id="F3140FEFCB0C95EF78C6EB22841EF41A" type="personal">
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<mods:roleTerm id="07A96B3867E8592A17F1B4EDAA844E21">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="D1AD50371DA16BF59029068BAD361587">Xie, Fuquan</mods:namePart>
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</mods:name>
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<mods:name id="BBBFBEB0320085A06F7A7DAB8AFB3DCB" type="personal">
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<mods:roleTerm id="3B2C45DEDC557F690293038EF5A45732">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="5631474597D8514675919EA6C846528D">Pei, Shengxiang</mods:namePart>
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</mods:name>
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<mods:name id="C1044C59E5BDB94647F929AEC060A3B9" type="personal">
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<mods:role id="92870BFE03F96953C877DBE3BBE2D0CE">
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<mods:roleTerm id="D6C556CD5C70BA512AC7524FE907656A">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="8AD5ADE6D541FD30F735325E8BA4F8BB">Jiang, Li</mods:namePart>
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</mods:name>
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<mods:typeOfResource id="FDFDD765D31C37B7A90216CBEE6DAA94">text</mods:typeOfResource>
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<mods:title id="AC3452014CD9DB047CD4ED5C71FDB9F4">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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</mods:titleInfo>
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<mods:part id="AA47F94F633711133D6C9326CDC1259D">
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<mods:date id="9CB67BB9787CDFD9F53E977B6F790C17">2020</mods:date>
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<mods:number id="F754E31256D620045D1EEFF9F52EC4B0">2019-11-12</mods:number>
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<mods:detail id="F430C6797AA32674A6E6EF637E5C8776" type="volume">
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<mods:number id="FF02EF33291325A7B547DF66C0F6E068">70</mods:number>
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<mods:start id="3720C8ECD63FBDF513C8726B915C7EE2">923</mods:start>
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<mods:classification id="D587D2B8E7ABD2195374B63E460C99F3">journal article</mods:classification>
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<mods:identifier id="536DC8CBB98E13BBBDE25DA960480303" type="DOI">10.1099/ijsem.0.003847</mods:identifier>
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<mods:identifier id="80B4090428AD2C94EB9FCFCAFF8AE284" type="GBIF-Dataset">8378fda1-7808-476f-9c03-b551204b03e6</mods:identifier>
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<mods:identifier id="15A7CA378A716857FCFFBEFB527D51C2" type="ISSN">1466-5034</mods:identifier>
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<mods:identifier id="F8FCB0D714BD50889F7CD3B585C3F37E" type="Zenodo-Dep">3745040</mods:identifier>
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<treatment id="03ED97173551FFC6FCD2FF4565422343" ID-DOI="http://doi.org/10.5281/zenodo.3809591" ID-GBIF-Taxon="163540110" ID-Zenodo-Dep="3809591" LSID="urn:lsid:plazi:treatment:03ED97173551FFC6FCD2FF4565422343" httpUri="http://treatment.plazi.org/id/03ED97173551FFC6FCD2FF4565422343" lastPageNumber="926" pageId="3" pageNumber="926">
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<subSection id="E2CB3FEA3551FFC6FCD2FF45655C26C1" pageId="3" pageNumber="926" type="multiple">
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<subSubSection id="C35E758A3551FFC6FCD2FF45655C26C1" pageId="3" pageNumber="926" type="nomenclature">
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<paragraph id="8BFB26013551FFC6FCD2FF45655C26C1" blockId="3.[828,1315,184,250]" pageId="3" pageNumber="926">
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<heading id="D0B3916D3551FFC6FCD2FF45655C26C1" allCaps="true" bold="true" fontSize="12" level="2" pageId="3" pageNumber="926" reason="2">
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<emphasis id="B930FA133551FFC6FCD2FF45655C26C1" bold="true" pageId="3" pageNumber="926">
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DESCRIPTION OF
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<emphasis id="B930FA133551FFC6FBDBFF4562D326C1" bold="true" italics="true" pageId="3" pageNumber="926">
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<taxonomicName id="4C445D823551FFC6FBDBFF45642A26EE" box="[1077,1315,184,213]" class="Actinobacteridae" family="Micrococcaceae" genus="Nesterenkonia" higherTaxonomySource="CoL" kingdom="Bacteria" order="Actinomycetales" pageId="3" pageNumber="926" phylum="Actinobacteria" rank="species" species="salmonea" status="sp. nov.">NESTERENKONIA</taxonomicName>
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SALMONEA
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</emphasis>
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<taxonomicNameLabel id="A20347683551FFC6FC0FFF20655C26C1" box="[993,1109,221,250]" pageId="3" pageNumber="926">SP. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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</subSection>
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<subSubSection id="C35E758A3551FFC6FCD2FEF465082764" pageId="3" pageNumber="926" type="etymology">
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<paragraph id="8BFB26013551FFC6FCD2FEF465082764" blockId="3.[828,1467,265,351]" pageId="3" pageNumber="926">
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<taxonomicName id="4C445D823551FFC6FCD2FEF4653E271A" box="[828,1079,265,289]" class="Actinobacteridae" family="Micrococcaceae" genus="Nesterenkonia" higherTaxonomySource="CoL" kingdom="Bacteria" order="Actinomycetales" pageId="3" pageNumber="926" phylum="Actinobacteria" rank="species" species="salmonea">
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<emphasis id="B930FA133551FFC6FCD2FEF4653E271A" box="[828,1079,265,289]" italics="true" pageId="3" pageNumber="926">Nesterenkonia salmonea</emphasis>
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</taxonomicName>
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(sal.mo'ne.a. N.L. fem. adj.
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<taxonomicName id="4C445D823551FFC6FAB6FEF464B2271A" box="[1368,1467,265,289]" class="Actinobacteridae" family="Micrococcaceae" genus="Nesterenkonia" higherTaxonomySource="CoL" kingdom="Bacteria" order="Actinomycetales" pageId="3" pageNumber="926" phylum="Actinobacteria" rank="species" species="salmonea">
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<emphasis id="B930FA133551FFC6FAB6FEF464B2271A" box="[1368,1467,265,289]" italics="true" pageId="3" pageNumber="926">salmonea</emphasis>
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</taxonomicName>
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dark-salmon-coloured, referring to the colour of the colonies on solid medium).
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</paragraph>
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</subSubSection>
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<subSubSection id="C35E758A3551FFC6FCD2FE88651B2337" pageId="3" pageNumber="926" type="description">
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<paragraph id="8BFB26013551FFC6FCD2FE88651B2337" blockId="3.[828,1467,373,1292]" pageId="3" pageNumber="926">
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Cells are Gram-stain-positive, aerobic, non-motile and rod-shaped, approximately
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<quantity id="4CBC8BE43551FFC6FB97FE6965FD2797" box="[1145,1268,404,428]" metricMagnitude="-4" metricUnit="m" metricValue="4.5" metricValueMax="5.0" metricValueMin="4.0" pageId="3" pageNumber="926" unit="mm" value="0.45" valueMax="0.5" valueMin="0.4">0.4–0.5 µm</quantity>
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in diameter and 0.7–1.0 µm long. Colonies on MA are approximately
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<quantity id="4CBC8BE43551FFC6FCD2FE2F627327D2" box="[828,890,466,490]" metricMagnitude="-3" metricUnit="m" metricValue="1.0" pageId="3" pageNumber="926" unit="mm" value="1.0">1 mm</quantity>
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in diameter, opaque, smooth, circular with regular margins, convex and dark salmon in colour after 6 days at 30 °C. Growth occurs in 0–10% (w/v) NaCl (optimum, 1–4%), at pH 7–12 (pH 9–10) and at 4–40 °C (30–35 °C). Catalase-positive and oxidase-negative. Negative for nitrate reduction, methyl red test, production of H
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<subScript id="17C024443551FFC6FAFCFD86641024B2" attach="both" box="[1298,1305,635,649]" fontSize="6" pageId="3" pageNumber="926">2</subScript>
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S and melanin, Voges–Proskauer reaction, and hydrolysis of starch, cellulose and casein. Assays using the API ZYM system are positive for alkaline phosphatase, esterase (C4), esterase lipase (C8), leucine arylamidase,
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<emphasis id="B930FA133551FFC6FBF1FD15652424C4" box="[1055,1069,744,767]" italics="true" pageId="3" pageNumber="926">α</emphasis>
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-chymotrypsin and naphthol-AS-BIphosphohydrolase; weakly positive for valine arylamidase, cystine arylamidase and acid phosphatase; negative for
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<emphasis id="B930FA133551FFC6FCD2FCB862462567" box="[828,847,837,860]" italics="true" pageId="3" pageNumber="926">N</emphasis>
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-acetyl-
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<emphasis id="B930FA133551FFC6FC4AFCB962BB2567" box="[932,946,836,860]" italics="true" pageId="3" pageNumber="926">β</emphasis>
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-glucosaminidase,
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<emphasis id="B930FA133551FFC6FB6AFCB8659B2567" box="[1156,1170,837,860]" italics="true" pageId="3" pageNumber="926">α</emphasis>
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-glucosidase, lipase (C14), trypsin,
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<emphasis id="B930FA133551FFC6FC79FC9962AC2540" box="[919,933,868,891]" italics="true" pageId="3" pageNumber="926">α</emphasis>
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-galactosidase,
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<emphasis id="B930FA133551FFC6FBA2FC9E65532540" box="[1100,1114,867,891]" italics="true" pageId="3" pageNumber="926">β</emphasis>
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-glucuronidase,
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<emphasis id="B930FA133551FFC6FAE5FC9E64102540" box="[1291,1305,867,891]" italics="true" pageId="3" pageNumber="926">β</emphasis>
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-galactosidase,
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<emphasis id="B930FA133551FFC6FCD2FC7F624325A1" box="[828,842,898,922]" italics="true" pageId="3" pageNumber="926">β</emphasis>
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-glucosidase,
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<emphasis id="B930FA133551FFC6FC0FFC7F62E625A2" box="[993,1007,898,921]" italics="true" pageId="3" pageNumber="926">α</emphasis>
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-mannosidase and
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<emphasis id="B930FA133551FFC6FB2AFC7F65DB25A1" box="[1220,1234,898,922]" italics="true" pageId="3" pageNumber="926">β</emphasis>
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-fucosidase. Analysis using the API 20NE system reveals that cells are positive for hydrolysis of aesculin and gelatin; negative for the remaining 18 substrates. The major menaquinones are MK-7, MK-8 and MK-9. The peptidoglycan
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<typeStatus id="54FF98A33551FFC6FADCFC00646B222E" box="[1330,1378,1021,1045]" pageId="3" pageNumber="926">type</typeStatus>
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is A4
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<emphasis id="B930FA133551FFC6FA4BFC0364BA222E" box="[1445,1459,1022,1045]" italics="true" pageId="3" pageNumber="926">α</emphasis>
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, L-Lys-Gly–L-Glu. The polar lipids detected are diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, one unidentified glycolipid, one unidentified lipid and one unidentified phospholipid. The major fatty acids are anteiso-C
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<subScript id="17C024443551FFC6FC46FB5B62CF228F" attach="left" box="[936,966,1190,1205]" fontSize="6" pageId="3" pageNumber="926">17:0</subScript>
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, anteiso-C
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<subScript id="17C024443551FFC6FBACFB5B6556228F" attach="left" box="[1090,1119,1190,1205]" fontSize="6" pageId="3" pageNumber="926">15:0</subScript>
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and anteiso-C
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<subScript id="17C024443551FFC6FAE6FB5B642C228F" attach="right" box="[1288,1317,1190,1205]" fontSize="6" pageId="3" pageNumber="926">17:1</subScript>
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; in addition, significant amounts of iso-C
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<subScript id="17C024443551FFC6FB98FB38659A22E8" attach="left" box="[1142,1171,1221,1236]" fontSize="6" pageId="3" pageNumber="926">15:0</subScript>
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, iso- C
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<subScript id="17C024443551FFC6FB0AFB38640822E8" attach="left" box="[1252,1281,1221,1236]" fontSize="6" pageId="3" pageNumber="926">16:0</subScript>
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and iso-C
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<subScript id="17C024443551FFC6FA9BFB38649B22E8" attach="left" box="[1397,1426,1221,1236]" fontSize="6" pageId="3" pageNumber="926">17:0</subScript>
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are also present. The genomic DNA G+C content of the
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<typeStatus id="54FF98A33551FFC6FA65FB2864B322D6" box="[1419,1466,1237,1261]" pageId="3" pageNumber="926">type</typeStatus>
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strain is 61.1 mol%.
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</paragraph>
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</subSubSection>
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<subSubSection id="C35E758A3551FFC6FCD2FADF65422343" pageId="3" pageNumber="926" type="materials_examined">
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<paragraph id="8BFB26013551FFC6FCD2FADF65422343" blockId="3.[828,1466,1311,1400]" pageId="3" pageNumber="926">
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<materialsCitation id="3B2C2C5C3551FFC6FCD2FADF654E2343" ID-GBIF-Occurrence="2597467801" collectionCode="GY" country="Afghanistan" location="Southern Atlantic Ocean" pageId="3" pageNumber="926" specimenCode="GY074T" specimenCount="1" typeStatus="type">
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The
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<typeStatus id="54FF98A33551FFC6FC86FADF629C2301" box="[872,917,1314,1338]" pageId="3" pageNumber="926">type</typeStatus>
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strain,
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<specimenCode id="DBE28E7A3551FFC6FC0EFADF653B2316" box="[992,1074,1311,1338]" pageId="3" pageNumber="926">
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GY074
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<superScript id="7C318B493551FFC6FBC7FAE2653B2316" attach="left" box="[1065,1074,1311,1325]" fontSize="6" pageId="3" pageNumber="926">T</superScript>
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</specimenCode>
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= (KCTC 39639
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<superScript id="7C318B493551FFC6FB35FAE265ED2316" attach="none" box="[1243,1252,1311,1325]" fontSize="6" pageId="3" pageNumber="926">T</superScript>
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=MCCC 1A11256
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<superScript id="7C318B493551FFC6FA4CFAE264A22316" attach="none" box="[1442,1451,1311,1325]" fontSize="6" pageId="3" pageNumber="926">T</superScript>
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), was isolated from marine sediment collected from the
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<location id="8E9B70DA3551FFC6FCD2FAA2654E2343" LSID="urn:lsid:plazi:treatment:03ED97173551FFC6FCD2FF4565422343:8E9B70DA3551FFC6FCD2FAA2654E2343" box="[828,1095,1375,1400]" country="Afghanistan" name="Southern Atlantic Ocean" pageId="3" pageNumber="926">Southern Atlantic Ocean</location>
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</materialsCitation>
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.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |