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<document id="E465532500ED3CA8E007EDB4B5C7B0C9" ID-DOI="10.11646/phytotaxa.115.1.1" ID-ISSN="1179-3163" ID-Zenodo-Dep="5078997" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1625660292248" checkinUser="felipe" docAuthor="Parnmen, Sittiporn, Leavitt, Steven D., Rangsiruji, Achariya &amp; Lumbsch, H. Thorsten" docDate="2013" docId="D2438705FFE40A5621A24A70FC7CF92C" docLanguage="en" docName="Phytotaxa.115.1.1-14.pdf" docOrigin="Phytotaxa 115 (1)" docSource="http://dx.doi.org/10.11646/phytotaxa.115.1.1" docStyle="DocumentStyle:13F189B31CB4CCCE9197361A4E100104.3:Phytotaxa.2011-2013.journal_article" docStyleId="13F189B31CB4CCCE9197361A4E100104" docStyleName="Phytotaxa.2011-2013.journal_article" docStyleVersion="3" docTitle="Cladia tasmanica Parnmen &amp; Lumbsch 2013, sp. nov." docType="treatment" docVersion="3" lastPageNumber="11" masterDocId="2E7AFF7DFFEE0A5C21354E7FFF83FFEC" masterDocTitle="Identification of species in the Cladia aggregata group using DNA barcoding (Ascomycota: Lecanorales)" masterLastPageNumber="14" masterPageNumber="1" pageNumber="11" updateTime="1698994869255" updateUser="plazi" zenodo-license-document="CLOSED">
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<mods:title id="1D7610AD0AD871F87CCAD6B390748646">Identification of species in the Cladia aggregata group using DNA barcoding (Ascomycota: Lecanorales)</mods:title>
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<mods:namePart id="D0D2777AB13153C29C9305FA277873CA">Parnmen, Sittiporn</mods:namePart>
<mods:affiliation id="DE8D761011113BCA2AE467D7892171E1">Department of Botany, The Field Museum, 1400 South Lake Shore Drive, Chicago, Illinois 60605 - 2496, U. S. A.;</mods:affiliation>
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<mods:namePart id="C899306450E51F12CEACD67F55648D09">Leavitt, Steven D.</mods:namePart>
<mods:affiliation id="525EE970B74C6DDC1270162439604BB7">Department of Botany, The Field Museum, 1400 South Lake Shore Drive, Chicago, Illinois 60605 - 2496, U. S. A.;</mods:affiliation>
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<mods:namePart id="3A5289446AEC8BCBA6D2E2AAD3C45C35">Rangsiruji, Achariya</mods:namePart>
<mods:affiliation id="B9406E2E5BB26D5BFCBC174E1B4BC55E">Department of Biology, Faculty of Science, Srinakharinwirot University, Bangkok, Thailand</mods:affiliation>
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<mods:namePart id="15C0AD98108F5E5A33DBFE54E02E9FCF">Lumbsch, H. Thorsten</mods:namePart>
<mods:affiliation id="F3496C470BD245103BCD7FEB40138CFB">Department of Botany, The Field Museum, 1400 South Lake Shore Drive, Chicago, Illinois 60605 - 2496, U. S. A.;</mods:affiliation>
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<mods:title id="6EA1EDA160A04700A833A83D6534A600">Phytotaxa</mods:title>
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<mods:date id="FA260799F75BD663B8B557E60388487C">2013</mods:date>
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<treatment id="D2438705FFE40A5621A24A70FC7CF92C" ID-DOI="http://doi.org/10.5281/zenodo.5079064" ID-Zenodo-Dep="5079064" LSID="urn:lsid:plazi:treatment:D2438705FFE40A5621A24A70FC7CF92C" httpUri="http://treatment.plazi.org/id/D2438705FFE40A5621A24A70FC7CF92C" lastPageNumber="11" pageId="10" pageNumber="11">
<subSubSection id="12F06598FFE40A5621A24A70FABBFB21" pageId="10" pageNumber="11" type="nomenclature">
<paragraph id="5A553613FFE40A5621A24A70FBD9FBC6" blockId="10.[151,1114,1039,1066]" box="[151,1114,1039,1066]" pageId="10" pageNumber="11">
<heading id="011D817FFFE40A5621A24A70FBD9FBC6" box="[151,1114,1039,1066]" fontSize="11" level="2" pageId="10" pageNumber="11" reason="3">
<taxonomicName id="9DEA4D90FFE40A5621A24A70FDE5FBC6" ID-CoL="5YWLC" authority="Parnmen &amp; Lumbsch" authorityName="Parnmen &amp; Lumbsch" authorityYear="2013" box="[151,614,1039,1066]" class="Lecanoromycetes" family="Cladoniaceae" genus="Cladia" kingdom="Fungi" order="Lecanorales" pageId="10" pageNumber="11" phylum="Ascomycota" rank="species" species="tasmanica" status="sp. nov.">
<emphasis id="689EEA01FFE40A5621A24A70FEE5FBC5" bold="true" box="[151,358,1039,1065]" italics="true" pageId="10" pageNumber="11">Cladia tasmanica</emphasis>
Parnmen &amp; Lumbsch
</taxonomicName>
,
<emphasis id="689EEA01FFE40A5623444A6FFD48FBC5" box="[625,715,1040,1065]" italics="true" pageId="10" pageNumber="11">
<taxonomicNameLabel id="73AD577AFFE40A5623444A6FFD48FBC5" box="[625,715,1040,1065]" pageId="10" pageNumber="11" rank="species">sp. nov.</taxonomicNameLabel>
</emphasis>
(
<figureCitation id="C2D12A96FFE40A5623EC4A6FFCB0FBC6" box="[729,819,1040,1066]" captionStart="FIGURE 3" captionStartId="9.[151,244,1951,1972]" captionTargetBox="[432,1149,219,1897]" captionTargetId="figure-54@9.[403,1183,191,1930]" captionTargetPageId="9" captionText="FIGURE 3. Morphology of the new Cladia species. A) = C. blanchonii (Hayward 004635 [F]); B) = C. cryptica (holotype [F]); C) = C. tasmanica (holotype [HO]). Scale = 5 mm." figureDoi="http://doi.org/10.5281/zenodo.5079003" httpUri="https://zenodo.org/record/5079003/files/figure.png" pageId="10" pageNumber="11">Fig. 3C</figureCitation>
). Mycobank No.: 803450
</heading>
</paragraph>
<paragraph id="5A553613FFE40A5621A24A49FABBFB21" blockId="10.[151,1437,1078,1229]" pageId="10" pageNumber="11">
Characterized by swollen sterile pseudopodetia, areolate,
<quantity id="9D129BF6FFE40A5622274A49FCE6FBA1" box="[786,869,1078,1101]" metricMagnitude="-2" metricUnit="m" metricValue="4.5" metricValueMax="6.0" metricValueMin="3.0" pageId="10" pageNumber="11" unit="cm" value="4.5" valueMax="6.0" valueMin="3.0">36 cm</quantity>
tall, glossy and usually smooth, chestnut-brown to blackish brown, not perforated, and di- or trichotomously branched. Conidiomata on terminal branches of sterile pseudopodetia, conidia
<quantity id="9D129BF6FFE40A5620F14A09FD95FB61" box="[452,534,1142,1165]" metricMagnitude="-3" metricUnit="m" metricValue="5.5" metricValueMax="7.0" metricValueMin="4.0" pageId="10" pageNumber="11" unit="mm" value="5.5" valueMax="7.0" valueMin="4.0">47 µm</quantity>
long, bacilliform. Fertile pseudopodetia robust and taller than sterile pseudopodetia, necrotic at the base, racemosely branched. Apothecia on terminal branches of fertile pseudopodetia, 0.51.0 mm wide, disk concave to plane, blackish; ascospores not seen. Secondary chemistry: Fumarprotocetraric acid.
</paragraph>
</subSubSection>
<subSubSection id="12F06598FFE40A5621A24A82FC8AFA13" pageId="10" pageNumber="11" type="materials_examined">
<paragraph id="5A553613FFE40A5621A24A82FD75FAD2" blockId="10.[151,1436,1277,1728]" pageId="10" pageNumber="11">
<emphasis id="689EEA01FFE40A5621A24A82FF5EFAFB" bold="true" box="[151,221,1277,1303]" pageId="10" pageNumber="11">Type:</emphasis>
<materialsCitation id="EA823C4EFFE40A5621C94A82FD75FAD2" country="Australia" county="Lake St. Clair National Park" elevation="770" latitude="-42.2" location="Frenchman's" longLatPrecision="1151" longitude="145.98334" municipality="Trail" pageId="10" pageNumber="11" specimenCount="1" stateProvince="Tasmania" typeStatus="holotype">
<collectingCountry id="22FD7683FFE40A5621C94A82FE26FAFB" box="[252,421,1277,1303]" name="Australia" pageId="10" pageNumber="11">AUSTRALIA</collectingCountry>
.
<collectingRegion id="982EF8F1FFE40A5620854A82FDA7FAFB" box="[432,548,1277,1303]" country="Australia" name="Tasmania" pageId="10" pageNumber="11">Tasmania</collectingRegion>
:
<collectingCounty id="B3344E9FFFE40A5623054A82FCFCFAFB" box="[560,895,1277,1303]" pageId="10" pageNumber="11">Lake St. Clair National Park</collectingCounty>
,
<collectingMunicipality id="BA31AC69FFE40A5622BE4A82FC40FAFB" box="[907,963,1277,1303]" pageId="10" pageNumber="11">Trail</collectingMunicipality>
to
<location id="5F3560C8FFE40A5622DC4A82FBFEFAFB" LSID="urn:lsid:plazi:treatment:D2438705FFE40A5621A24A70FC7CF92C:5F3560C8FFE40A5622DC4A82FBFEFAFB" box="[1001,1149,1277,1303]" country="Australia" county="Lake St. Clair National Park" latitude="-42.2" longLatPrecision="1151" longitude="145.98334" municipality="Trail" name="Frenchman's" pageId="10" pageNumber="11" stateProvince="Tasmania">Frenchman's</location>
cap,
<geoCoordinate id="3FDE50D4FFE40A5625894A82FA9FFAFB" box="[1212,1308,1277,1303]" degrees="42" direction="south" minutes="12" orientation="latitude" pageId="10" pageNumber="11" precision="925" value="-42.2">42°12S</geoCoordinate>
<geoCoordinate id="3FDE50D4FFE40A5624114A82FA14FAFB" box="[1316,1431,1277,1303]" degrees="145" direction="east" minutes="59" orientation="longitude" pageId="10" pageNumber="11" precision="925" value="145.98334">145°59E</geoCoordinate>
,
<quantity id="9D129BF6FFE40A5621A24B5BFF67FAD2" box="[151,228,1316,1342]" metricMagnitude="2" metricUnit="m" metricValue="7.7" pageId="10" pageNumber="11" unit="m" value="770.0">
<elevation id="D1C7D120FFE40A5621A24B5BFF67FAD2" box="[151,228,1316,1342]" metricMagnitude="2" metricUnit="m" metricValue="7.7" pageId="10" pageNumber="11" unit="m" value="770.0">770 m</elevation>
</quantity>
,
<emphasis id="689EEA01FFE40A5621DA4B5BFE36FAD1" box="[239,437,1316,1341]" italics="true" pageId="10" pageNumber="11">Lumbsch 20011c</emphasis>
(
<typeStatus id="855188B1FFE40A5620F14B5BFDAFFAD2" box="[452,556,1316,1342]" pageId="10" pageNumber="11" type="holotype">holotype</typeStatus>
HO!; isotype F!)
</materialsCitation>
</paragraph>
<paragraph id="5A553613FFE40A5621F34B35FDD0FA34" blockId="10.[151,1436,1277,1728]" pageId="10" pageNumber="11">
<emphasis id="689EEA01FFE40A5621F34B35FE34FA88" bold="true" box="[198,439,1354,1380]" pageId="10" pageNumber="11">Phylogenetic notes:</emphasis>
—Strongly supported as a monophyletic lineage in concatenated multilocus gene tree (
<collectionCode id="3CFBAED6FFE40A5621AA4B0EFF4CFA67" box="[159,207,1393,1419]" country="France" name="Musee de Lectoure" pageId="10" pageNumber="11">ML</collectionCode>
bootstrap = 100%, posterior probability = 1.0).
<taxonomicName id="9DEA4D90FFE40A56220F4B0EFB9AFA66" box="[826,1049,1393,1418]" class="Lecanoromycetes" family="Cladoniaceae" genus="Cladia" kingdom="Fungi" order="Lecanorales" pageId="10" pageNumber="11" phylum="Ascomycota" rank="species" species="tasmanica">
<emphasis id="689EEA01FFE40A56220F4B0EFB9AFA66" box="[826,1049,1393,1418]" italics="true" pageId="10" pageNumber="11">Cladia tasmanica</emphasis>
</taxonomicName>
was previously called clade 9 (
<bibRefCitation id="3E7B4BE2FFE40A5621AA4BE7FE1AFA5E" author="Parnmen, S. &amp; Rangsiruji, A. &amp; Mongkolsuk, P. &amp; Boonpragob, K. &amp; Nutakki, A. &amp; Lumbsch, H. T." box="[159,409,1432,1458]" pageId="10" pageNumber="11" pagination="52245" refId="ref10002" refString="Parnmen, S., Rangsiruji, A., Mongkolsuk, P., Boonpragob, K., Nutakki, A. &amp; Lumbsch, H. T. (2012) Using phylogenetic and coalescent methods to understand the species diversity in the Cladia aggregata complex (Ascomycota, Lecanorales). PLoS ONE 7: e 52245. http: // dx. doi. org / 10.1371 / journal. pone. 0052245" type="journal article" year="2012">
Parnmen
<emphasis id="689EEA01FFE40A5620264BE7FECCFA5D" box="[275,335,1432,1457]" italics="true" pageId="10" pageNumber="11">et al.</emphasis>
2012
</bibRefCitation>
). This species belongs to an early diverging lineage within the
<taxonomicName id="9DEA4D90FFE40A5625A54BE7FAAEFA5D" authorityName="Nylander" authorityYear="1870" baseAuthorityName="Sw." box="[1168,1325,1432,1457]" class="Lecanoromycetes" family="Cladoniaceae" genus="Cladia" kingdom="Fungi" order="Lecanorales" pageId="10" pageNumber="11" phylum="Ascomycota" rank="species" species="aggregata">
<emphasis id="689EEA01FFE40A5625A54BE7FAAEFA5D" box="[1168,1325,1432,1457]" italics="true" pageId="10" pageNumber="11">C. aggregata</emphasis>
</taxonomicName>
complex sister to all other species in the group.
</paragraph>
<paragraph id="5A553613FFE40A5621F34B9AFC8AFA13" blockId="10.[151,1436,1277,1728]" box="[198,777,1509,1535]" pageId="10" pageNumber="11">
<emphasis id="689EEA01FFE40A5621F34B9AFE47FA13" bold="true" box="[198,452,1509,1535]" pageId="10" pageNumber="11">Reference sequence:</emphasis>
<materialsCitation id="EA823C4EFFE40A5620D74B9AFC86FA13" accessionNumber="JN115301" box="[482,773,1509,1535]" collectorName="GenBank No." pageId="10" pageNumber="11" specimenCount="1">
<collectorName id="F71F53C5FFE40A5620D74B9AFD00FA13" box="[482,643,1509,1535]" pageId="10" pageNumber="11">GenBank No.</collectorName>
<accessionNumber id="45B9ABF0FFE40A5623BF4B9AFC86FA13" box="[650,773,1509,1535]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/JN115301" pageId="10" pageNumber="11">JN115301</accessionNumber>
</materialsCitation>
.
</paragraph>
</subSubSection>
<subSubSection id="12F06598FFE40A5621F34874FD2DF9A0" pageId="10" pageNumber="11" type="distribution">
<paragraph id="5A553613FFE40A5621F34874FD2DF9A0" blockId="10.[151,1436,1277,1728]" pageId="10" pageNumber="11">
<emphasis id="689EEA01FFE40A5621F34874FD8BF9C9" bold="true" box="[198,520,1547,1573]" pageId="10" pageNumber="11">Distribution and habitat:</emphasis>
This species is only known from
<collectingRegion id="982EF8F1FFE40A56229A4873FBA1F9CA" box="[943,1058,1548,1574]" country="Australia" name="Tasmania" pageId="10" pageNumber="11">Tasmania</collectingRegion>
, where it grows on soil in wet sclerophyll forests and buttongrass moorland.
</paragraph>
</subSubSection>
<subSubSection id="12F06598FFE40A5621F34827FC7CF92C" pageId="10" pageNumber="11" type="etymology">
<paragraph id="5A553613FFE40A5621F34827FBD5F99F" blockId="10.[151,1436,1277,1728]" box="[198,1110,1624,1651]" pageId="10" pageNumber="11">
<emphasis id="689EEA01FFE40A5621F34827FED4F99E" bold="true" box="[198,343,1624,1650]" pageId="10" pageNumber="11">Etymology:</emphasis>
—Referring to the island of
<collectingRegion id="982EF8F1FFE40A5623974826FC91F99F" box="[674,786,1625,1651]" country="Australia" name="Tasmania" pageId="10" pageNumber="11">Tasmania</collectingRegion>
where the species is found.
</paragraph>
<paragraph id="5A553613FFE40A5621F34800FC7CF92C" blockId="10.[151,1436,1277,1728]" pageId="10" pageNumber="11">
<materialsCitation id="EA823C4EFFE40A5621F34800FC78F92C" collectingDate="2009-03" collectionCode="RAMK" collectorName="Lumbsch &amp; Widhelm &amp; Parnmen" country="Australia" location="Southwest National Park" pageId="10" pageNumber="11" specimenCount="2" stateProvince="Tasmania" typeStatus="paratype">
<emphasis id="689EEA01FFE40A5621F34800FC83F975" bold="true" box="[198,768,1663,1689]" pageId="10" pageNumber="11">
Additional specimens examined (
<typeStatus id="855188B1FFE40A5623454800FD70F975" box="[624,755,1663,1689]" pageId="10" pageNumber="11" type="paratype">paratypes</typeStatus>
):
</emphasis>
<collectingCountry id="22FD7683FFE40A56221F48FFFC57F976" box="[810,980,1664,1690]" name="Australia" pageId="10" pageNumber="11">AUSTRALIA</collectingCountry>
.
<collectingRegion id="982EF8F1FFE40A5622D148FFFBDBF976" box="[996,1112,1664,1690]" country="Australia" name="Tasmania" pageId="10" pageNumber="11">Tasmania</collectingRegion>
:
<location id="5F3560C8FFE40A56255D48FFFA14F976" LSID="urn:lsid:plazi:treatment:D2438705FFE40A5621A24A70FC7CF92C:5F3560C8FFE40A56255D48FFFA14F976" box="[1128,1431,1664,1690]" country="Australia" name="Southwest National Park" pageId="10" pageNumber="11" stateProvince="Tasmania">Southwest National Park</location>
,
<date id="2E5410D3FFE40A5621A248D9FEABF92C" box="[151,296,1702,1728]" pageId="10" pageNumber="11" value="2009-03">
<collectingDate id="3E10E93BFFE40A5621A248D9FEABF92C" box="[151,296,1702,1728]" pageId="10" pageNumber="11" value="2009-03">March 2009</collectingDate>
</date>
,
<emphasis id="689EEA01FFE40A56200148D8FE1DF92C" box="[308,414,1703,1728]" italics="true" pageId="10" pageNumber="11">
<collectorName id="F71F53C5FFE40A56200148D8FE1DF92C" box="[308,414,1703,1728]" pageId="10" pageNumber="11">Lumbsch</collectorName>
</emphasis>
,
<emphasis id="689EEA01FFE40A56209948D8FCE4F92C" box="[428,871,1703,1728]" italics="true" pageId="10" pageNumber="11">
<collectorName id="F71F53C5FFE40A56209948D8FD90F92C" box="[428,531,1703,1728]" pageId="10" pageNumber="11">Widhelm</collectorName>
&amp;
<collectorName id="F71F53C5FFE40A56230D48D8FD20F92C" box="[568,675,1703,1728]" pageId="10" pageNumber="11">Parnmen</collectorName>
19989o, 19994k
</emphasis>
(F,
<collectionCode id="3CFBAED6FFE40A5622A048D9FC71F92C" box="[917,1010,1702,1728]" country="Thailand" httpUri="http://biocol.org/urn:lsid:biocol.org:col:13907" lsid="urn:lsid:biocol.org:col:13907" name="Ramkhamhaeng University" pageId="10" pageNumber="11" type="Herbarium">RAMK</collectionCode>
)
</materialsCitation>
.
</paragraph>
</subSubSection>
</treatment>
</document>