201 lines
22 KiB
XML
201 lines
22 KiB
XML
<document id="9D2F47DEC6793F4A310C528015E951A6" ID-DOI="10.5281/zenodo.187018" ID-GBIF-Dataset="35d81ccb-1856-4852-a5b6-d9058b3dbc0b" ID-ISSN="1175-5326" ID-Zenodo-Dep="187018" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1461060371161" checkinUser="plazi" docAuthor="Hedges, Blair, Couloux, Arnaud & Vidal, Nicolas" docDate="2009" docId="674E87DDF748FFEDFF369458C9D5BDDD" docLanguage="en" docName="zt02067p028.pdf" docOrigin="Zootaxa 2067" docStyle="DocumentStyle:890A69B780ED73D6DB8551B71C8AC79E.4:Zootaxa.2009-2012.journal_article" docStyleId="890A69B780ED73D6DB8551B71C8AC79E" docStyleName="Zootaxa.2009-2012.journal_article" docStyleVersion="4" docTitle="Haitiophis Hedges & Vidal" docType="treatment" docVersion="7" lastPageNumber="17" masterDocId="9B77FFA5F758FFFDFFA1950DC830B939" masterDocTitle="Molecular phylogeny, classification, and biogeography of West Indian racer snakes of the Tribe Alsophiini (Squamata, Dipsadidae, Xenodontinae)" masterLastPageNumber="28" masterPageNumber="1" pageNumber="17" updateTime="1698582155577" updateUser="plazi">
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<mods:titleInfo id="53027894AFC81C77E5F1E899D3B87561">
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<mods:title id="EC1E45E992CF9F9EFC2FED20081BA859">Molecular phylogeny, classification, and biogeography of West Indian racer snakes of the Tribe Alsophiini (Squamata, Dipsadidae, Xenodontinae)</mods:title>
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<mods:name id="513A03B2280F070A5FC4E10B6AF11EDC" type="personal">
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<mods:roleTerm id="C50B266B0467D2408A9F27A4E4700C27">Author</mods:roleTerm>
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<mods:namePart id="2567A77EE7C2B8FBF47CA4A4CA3C7963">Hedges, Blair</mods:namePart>
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<mods:namePart id="DE8C4CA6C36F4E61F5BC0E612ED33006">Couloux, Arnaud</mods:namePart>
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<mods:roleTerm id="34B04F1797CE7B49767BCF2FA29A0CCE">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="3124B47C3A421E7C6F5BBF5BB222C4D3">Vidal, Nicolas</mods:namePart>
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<mods:typeOfResource id="E193AAA095D75845A4A10568DC44AA1C">text</mods:typeOfResource>
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<mods:title id="A0474ED832AF741FB4A3EB608C00AEDC">Zootaxa</mods:title>
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<mods:part id="5A067E6C03F30922AFD17143670C712B">
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<mods:date id="D06436E3B1183384F30638F6946E8352">2009</mods:date>
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<mods:detail id="4F69C93A883AE63C8738739E2289CB9A" type="volume">
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<mods:number id="1539CCAEAAEBF27ADA0A198757390108">2067</mods:number>
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<mods:classification id="7913497263A5624AFF7941B86DE29862">journal article</mods:classification>
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<mods:identifier id="FCB4E079C5D123481DCD9FAC0DDEB119" type="DOI">10.5281/zenodo.187018</mods:identifier>
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<mods:identifier id="E7EE2952F6B1D747AD3EC3A68E95A2A8" type="GBIF-Dataset">35d81ccb-1856-4852-a5b6-d9058b3dbc0b</mods:identifier>
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<mods:identifier id="80E9AB0088120F5539C1A526CFA01533" type="ISSN">1175-5326</mods:identifier>
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<mods:identifier id="6B6BCD776FBE000D879AD3277AB6DB71" type="Zenodo-Dep">187018</mods:identifier>
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<treatment id="674E87DDF748FFEDFF369458C9D5BDDD" ID-DOI="http://doi.org/10.5281/zenodo.6220091" ID-GBIF-Taxon="119614024" ID-Zenodo-Dep="6220091" LSID="urn:lsid:plazi:treatment:674E87DDF748FFEDFF369458C9D5BDDD" httpUri="http://treatment.plazi.org/id/674E87DDF748FFEDFF369458C9D5BDDD" lastPageNumber="17" pageId="16" pageNumber="17">
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<subSubSection id="A7FD6540F748FFEDFF369458CAE7B856" box="[151,727,341,367]" pageId="16" pageNumber="17" type="nomenclature">
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<paragraph id="EF5836CBF748FFEDFF369458CAE7B856" blockId="16.[151,727,341,367]" box="[151,727,341,367]" pageId="16" pageNumber="17">
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<heading id="B41081A7F748FFEDFF369458CAE7B856" bold="true" box="[151,727,341,367]" fontSize="11" level="1" pageId="16" pageNumber="17" reason="1">
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<emphasis id="DD93EAD9F748FFEDFF369458CAE7B856" bold="true" box="[151,727,341,367]" pageId="16" pageNumber="17">
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Genus
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<taxonomicName id="28E74D48F748FFEDFF4F9458CA0BB856" authority="Hedges & Vidal" authorityName="Hedges & Vidal" box="[238,571,341,367]" class="Reptilia" family="Colubridae" genus="Haitiophis" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="genus">
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<emphasis id="DD93EAD9F748FFEDFF4F9458C95DB856" bold="true" box="[238,365,341,367]" italics="true" pageId="16" pageNumber="17">Haitiophis</emphasis>
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Hedges & Vidal
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</taxonomicName>
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, New Genus
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="A7FD6540F748FFEDFF369493CAC1B881" box="[151,753,414,440]" pageId="16" pageNumber="17" type="materials_examined">
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||
<paragraph id="EF5836CBF748FFEDFF369493CAC1B881" blockId="16.[151,1437,414,1252]" box="[151,753,414,440]" pageId="16" pageNumber="17">
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<emphasis id="DD93EAD9F748FFEDFF369493C909B881" bold="true" box="[151,313,414,440]" pageId="16" pageNumber="17">
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<typeStatus id="305C8869F748FFEDFF369493C8E4B881" box="[151,212,414,440]" pageId="16" pageNumber="17">Type</typeStatus>
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species.
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</emphasis>
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<taxonomicName id="28E74D48F748FFEDFEE19492CADDB881" authority="Peters, 1863:282" authorityName="Peters" authorityPageNumber="282" authorityYear="1863" box="[320,749,414,440]" class="Reptilia" family="Colubridae" genus="Zamenis" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="species" species="anomalus">
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<emphasis id="DD93EAD9F748FFEDFEE19492CA2DB881" box="[320,541,415,440]" italics="true" pageId="16" pageNumber="17">Zamenis anomalus</emphasis>
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<bibRefCitation id="8B764B3AF748FFEDFD859493CA89B881" author="Peters" box="[548,697,414,440]" pageId="16" pageNumber="25" refString="Peters, W. C. H. (1863) Uber einige neue oder weniger bekannte Schlangenarten des zoologischen Museums zu Berlin. Monatsbericht Koniglich Preussischen Akademie der Wissenschaften zu Berlin, 1863, 272 - 289." type="journal article" year="1863">Peters, 1863</bibRefCitation>
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:282
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</taxonomicName>
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.
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</paragraph>
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</subSubSection>
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<subSubSection id="A7FD6540F748FFEDFF6794C8CC56BB99" pageId="16" pageNumber="17" type="diagnosis">
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<paragraph id="EF5836CBF748FFEDFF6794C8C9AEBB43" blockId="16.[151,1437,414,1252]" pageId="16" pageNumber="17">
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<emphasis id="DD93EAD9F748FFEDFF6794C8C976B8E6" bold="true" box="[198,326,453,479]" pageId="16" pageNumber="17">Diagnosis.</emphasis>
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The single species in this genus has 21 midbody scale rows, 207–215 ventrals, 113–130 subcaudals, 2 apical scale pits, 8 upper labials, 10 lower labials, 14 total maxillary teeth, and 18–19 dentary teeth (
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<tableCitation id="A2650370F748FFEDFF41971FC90EBB15" box="[224,318,530,556]" captionStart="TABLE 2" captionStartId="11.[151,242,977,1001]" captionText="TABLE 2. Morphological variation in the genera of alsophiine snakes (SVL = snout-vent length), from Barbour &" pageId="16" pageNumber="17">Table 2</tableCitation>
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).
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<taxonomicName id="28E74D48F748FFEDFEF5971FC9E1BB12" box="[340,465,530,555]" class="Reptilia" family="Colubridae" genus="Haitiophis" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="genus">
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<emphasis id="DD93EAD9F748FFEDFEF5971FC9E1BB12" box="[340,465,530,555]" italics="true" pageId="16" pageNumber="17">Haitiophis</emphasis>
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</taxonomicName>
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differs from all other genera except
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<taxonomicName id="28E74D48F748FFEDFC29971FCBDEBB12" box="[904,1006,530,555]" class="Reptilia" family="Colubridae" genus="Alsophis" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="genus">
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<emphasis id="DD93EAD9F748FFEDFC29971FCBDEBB12" box="[904,1006,530,555]" italics="true" pageId="16" pageNumber="17">Alsophis</emphasis>
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</taxonomicName>
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in its high number (21) of midbody scales, and from
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<taxonomicName id="28E74D48F748FFEDFEC89734C9E2BB6B" box="[361,466,569,594]" class="Reptilia" family="Colubridae" genus="Alsophis" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="genus">
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<emphasis id="DD93EAD9F748FFEDFEC89734C9E2BB6B" box="[361,466,569,594]" italics="true" pageId="16" pageNumber="17">Alsophis</emphasis>
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</taxonomicName>
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in its low number of total maxillary teeth (14 versus 18–21) and dentary teeth (18–19 versus 21–26).
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</paragraph>
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<paragraph id="EF5836CBF748FFEDFF67978BCC56BB99" blockId="16.[151,1437,414,1252]" box="[198,1126,646,672]" pageId="16" pageNumber="17">
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<emphasis id="DD93EAD9F748FFEDFF67978BC903BB99" bold="true" box="[198,307,646,672]" pageId="16" pageNumber="17">Content.</emphasis>
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One species,
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<taxonomicName id="28E74D48F748FFEDFE74978ACAFABB99" box="[469,714,647,672]" class="Reptilia" family="Colubridae" genus="Haitiophis" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="species" species="anomalus">
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<emphasis id="DD93EAD9F748FFEDFE74978ACAFABB99" box="[469,714,647,672]" italics="true" pageId="16" pageNumber="17">Haitiophis anomalus</emphasis>
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</taxonomicName>
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, is included in the genus (
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<tableCitation id="A2650370F748FFEDFC5D978BCC65BB99" box="[1020,1109,646,672]" captionStart="TABLE 1" captionStartId="7.[151,241,151,175]" captionText="TABLE 1. Classification of West Indian xenodontine snakes, Tribe Alsophiini. The arrangement used in this study is compared with that in previous classifications (Maglio 1970; Schwartz & Henderson 1991; Powell et al. 1996)." pageId="16" pageNumber="17">Table 1</tableCitation>
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).
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</paragraph>
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</subSubSection>
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<subSubSection id="A7FD6540F748FFEDFF6797A0CA34BBD7" pageId="16" pageNumber="17" type="distribution">
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<paragraph id="EF5836CBF748FFEDFF6797A0CA34BBD7" blockId="16.[151,1437,414,1252]" pageId="16" pageNumber="17">
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||
<emphasis id="DD93EAD9F748FFEDFF6797A0C957BBFE" bold="true" box="[198,359,685,711]" pageId="16" pageNumber="17">Distribution.</emphasis>
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The genus is distributed in Hispaniola, including
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<collectingCountry id="97F0765BF748FFEDFC6C97A0CBDCBBFE" box="[973,1004,685,711]" name="Iceland" pageId="16" pageNumber="17">Ile</collectingCountry>
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de la Tortue (
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<collectingCountry id="97F0765BF748FFEDFB3C97A0CCEBBBFE" box="[1181,1243,685,711]" name="Haiti" pageId="16" pageNumber="17">Haiti</collectingCountry>
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) and
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<collectingCountry id="97F0765BF748FFEDFA8597A0CD7EBBFE" box="[1316,1358,685,711]" name="Iceland" pageId="16" pageNumber="17">Isla</collectingCountry>
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Beata (
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<collectingCountry id="97F0765BF748FFEDFF3F97D9C9A6BBD7" box="[158,406,724,750]" name="Dominican Republic" pageId="16" pageNumber="17">Dominican Republic</collectingCountry>
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) (
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<figureCitation id="77DC2A4EF748FFEDFE0C97D9C9C5BBD7" box="[429,501,724,750]" captionStart="FIGURE 2" captionStartId="11.[151,255,804,828]" captionTargetBox="[279,1307,205,780]" captionTargetId="figure@11.[279,1307,194,780]" captionTargetPageId="11" captionText="FIGURE 2. Map showing the West Indies (including the southern tip of Florida above, Central America to the west, and the northern edge of South America below) and the distributions of the genera of the Tribe Alsophiini, Subfamily Xenodontinae, Family Dipsadidae." httpUri="https://zenodo.org/record/187020/files/figure.png" pageId="16" pageNumber="17">Fig. 2</figureCitation>
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).
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</paragraph>
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</subSubSection>
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<subSubSection id="A7FD6540F748FFEDFF6797F7CC16BA02" pageId="16" pageNumber="17" type="etymology">
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<paragraph id="EF5836CBF748FFEDFF6797F7CC16BA02" blockId="16.[151,1437,414,1252]" pageId="16" pageNumber="17">
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<emphasis id="DD93EAD9F748FFEDFF6797F7C963BA2D" bold="true" box="[198,339,762,788]" pageId="16" pageNumber="17">Etymology.</emphasis>
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The generic name is derived from the Taino word
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<collectingCountry id="97F0765BF748FFEDFC6397F7CBCDBA2D" box="[962,1021,762,788]" name="Haiti" pageId="16" pageNumber="17">Haiti</collectingCountry>
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(meaning high mountains) for the entire island now called Hispaniola and refers to the distribution of the genus.
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</paragraph>
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</subSubSection>
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<subSubSection id="A7FD6540F748FFEDFF67964AC9D5BDDD" pageId="16" pageNumber="17" type="discussion">
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<paragraph id="EF5836CBF748FFEDFF67964AC9D5BDDD" blockId="16.[151,1437,414,1252]" pageId="16" pageNumber="17">
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<emphasis id="DD93EAD9F748FFEDFF67964AC970BA58" bold="true" box="[198,320,839,865]" pageId="16" pageNumber="17">Remarks.</emphasis>
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The single species of
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<taxonomicName id="28E74D48F748FFEDFDE59645CAF0BA58" box="[580,704,840,865]" class="Reptilia" family="Colubridae" genus="Haitiophis" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="genus">
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<emphasis id="DD93EAD9F748FFEDFDE59645CAF0BA58" box="[580,704,840,865]" italics="true" pageId="16" pageNumber="17">Haitiophis</emphasis>
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</taxonomicName>
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is one of the largest snakes in the family
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<taxonomicName id="28E74D48F748FFEDFB049645CD1CBA5B" box="[1189,1324,840,866]" class="Reptilia" family="Dipsadidae" higherTaxonomySource="GBIF" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="family">Dipsadidae</taxonomicName>
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, reaching 2.8 meters in total length and 2.0 meters in SVL (Powell & Henderson 1998;
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<bibRefCitation id="8B764B3AF748FFEDFB9E9663CD18BAB1" author="Thomas" box="[1087,1320,878,904]" pageId="16" pageNumber="26" refString="Thomas, R., Henderson, R. W., Powell, R. & Rodriguez, P. G. (2007) Alsophis anomalus (Hispaniolan Brown Racer). Herpetological Review, 38, 338 - 339." type="journal article" year="2007">Thomas et al. 2007</bibRefCitation>
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) and past morphological studies have had difficulty in determining its relationship to other alsophiine species (
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<bibRefCitation id="8B764B3AF748FFEDFAE49698C8E5BAEF" author="Maglio" pageId="16" pageNumber="25" refString="Maglio, V. J. (1970) West Indian xenodontine colubrid snakes: their probable origin, phylogeny, and zoogeography. Bulletin of the Museum of Comparative Zoology, 141, 1 - 54." type="journal article" year="1970">Maglio 1970</bibRefCitation>
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;
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<bibRefCitation id="8B764B3AF748FFEDFF4396B1C95DBAEF" author="Zaher" box="[226,365,956,982]" pageId="16" pageNumber="26" refString="Zaher, H. (1999) Hemipenial morphology of the South American xenodontine snakes, with a proposal for a monophyletic Xenodontinae and a reappraisal of colubroid hemipenes. Bulletin of the American Museum of Natural History, 240, 1 - 168." type="journal article" year="1999">Zaher 1999</bibRefCitation>
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). Our molecular evidence from the 12S and 16S rRNA genes associates
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<taxonomicName id="28E74D48F748FFEDFB6896B1CD50BAEC" box="[1225,1376,956,981]" class="Reptilia" family="Colubridae" genus="Haitiophis" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="species" species="anomalus">
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||
<emphasis id="DD93EAD9F748FFEDFB6896B1CD50BAEC" box="[1225,1376,956,981]" italics="true" pageId="16" pageNumber="17">H. anomalus</emphasis>
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||
</taxonomicName>
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||
with
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<taxonomicName id="28E74D48F748FFEDFF3696EFC8C9BAC2" box="[151,249,994,1019]" class="Reptilia" family="Colubridae" genus="Caraiba" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="genus">
|
||
<emphasis id="DD93EAD9F748FFEDFF3696EFC8C9BAC2" box="[151,249,994,1019]" italics="true" pageId="16" pageNumber="17">Caraiba</emphasis>
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||
</taxonomicName>
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and
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<taxonomicName id="28E74D48F748FFEDFE9396EFC992BAC2" box="[306,418,994,1019]" class="Reptilia" family="Colubridae" genus="Cubophis" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="genus">
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||
<emphasis id="DD93EAD9F748FFEDFE9396EFC992BAC2" box="[306,418,994,1019]" italics="true" pageId="16" pageNumber="17">Cubophis</emphasis>
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</taxonomicName>
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, but more data are needed to place it in the phylogeny with confidence.
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<bibRefCitation id="8B764B3AF748FFEDFB5096EFCDABBAC5" author="Maglio" box="[1265,1435,994,1020]" pageId="16" pageNumber="25" refString="Maglio, V. J. (1970) West Indian xenodontine colubrid snakes: their probable origin, phylogeny, and zoogeography. Bulletin of the Museum of Comparative Zoology, 141, 1 - 54." type="journal article" year="1970">Maglio (1970)</bibRefCitation>
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also noted that the species is closer to a Cuban species (
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<taxonomicName id="28E74D48F748FFEDFC929104CC61BD1B" box="[819,1105,1033,1058]" class="Reptilia" family="Colubridae" genus="Cubophis" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="species" species="cantherigerus">
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<emphasis id="DD93EAD9F748FFEDFC929104CC61BD1B" box="[819,1105,1033,1058]" italics="true" pageId="16" pageNumber="17">Cubophis cantherigerus</emphasis>
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</taxonomicName>
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) than any other in the West Indies—in having similar vomer, postorbital, and supratemporal bones. We classify it here in a separate genus because it differs considerably in scalation from either
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<taxonomicName id="28E74D48F748FFEDFCB7915ACB48BD49" box="[790,888,1111,1136]" class="Reptilia" family="Colubridae" genus="Caraiba" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="genus">
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<emphasis id="DD93EAD9F748FFEDFCB7915ACB48BD49" box="[790,888,1111,1136]" italics="true" pageId="16" pageNumber="17">Caraiba</emphasis>
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</taxonomicName>
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or
|
||
<taxonomicName id="28E74D48F748FFEDFC3F915ACC3EBD49" box="[926,1038,1111,1136]" class="Reptilia" family="Colubridae" genus="Cubophis" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="genus">
|
||
<emphasis id="DD93EAD9F748FFEDFC3F915ACC3EBD49" box="[926,1038,1111,1136]" italics="true" pageId="16" pageNumber="17">Cubophis</emphasis>
|
||
</taxonomicName>
|
||
.
|
||
<bibRefCitation id="8B764B3AF748FFEDFBBC915BCCC5BD49" box="[1053,1269,1110,1136]" pageId="16" pageNumber="26" refString="Zaher, H., Grazziotin, F. G., Cadle, J. E., Murphy, R. W., Moura-Leite, J. C. & Bonatto, S. L. (2009) Molecular phylogeny of advanced snakes (Serpentes, Caenophidia) with an emphasis on South America xenodontines: a revised classification and descriptions of new taxa. Papeis Avulsos de Zoologia, 49,115 - 153." type="book">Zaher et al. (2009)</bibRefCitation>
|
||
classified this species with
|
||
<taxonomicName id="28E74D48F748FFEDFE9D9170CAA6BDAF" box="[316,662,1149,1174]" class="Reptilia" family="Colubridae" genus="Borikenophis" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="species" species="portoricensis">
|
||
<emphasis id="DD93EAD9F748FFEDFE9D9170CAA6BDAF" box="[316,662,1149,1174]" italics="true" pageId="16" pageNumber="17">Borikenophis portoricensis</emphasis>
|
||
</taxonomicName>
|
||
and other West Indian species including
|
||
<taxonomicName id="28E74D48F748FFEDFB049170CD57BDAF" box="[1189,1383,1149,1174]" class="Reptilia" family="Colubridae" genus="Cubophis" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="species" species="vudii">
|
||
<emphasis id="DD93EAD9F748FFEDFB049170CD57BDAF" box="[1189,1383,1149,1174]" italics="true" pageId="16" pageNumber="17">Cubophis vudii</emphasis>
|
||
</taxonomicName>
|
||
and
|
||
<taxonomicName id="28E74D48F748FFEDFF3691A9C9F1BD84" box="[151,449,1188,1213]" class="Reptilia" family="Colubridae" genus="Cubophis" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="species" species="cantherigerus">
|
||
<emphasis id="DD93EAD9F748FFEDFF3691A9C9F1BD84" box="[151,449,1188,1213]" italics="true" pageId="16" pageNumber="17">Cubophis cantherigerus</emphasis>
|
||
</taxonomicName>
|
||
in
|
||
<taxonomicName id="28E74D48F748FFEDFE4A91A9CA9CBD87" authority="Cope" authorityName="Cope" box="[491,684,1188,1214]" genus="Ocyophis" higherTaxonomySource="GBIF" kingdom="Animalia" pageId="16" pageNumber="17" phylum="Chordata" rank="genus">
|
||
<emphasis id="DD93EAD9F748FFEDFE4A91A9CA6FBD84" box="[491,607,1188,1213]" italics="true" pageId="16" pageNumber="17">Ocyophis</emphasis>
|
||
Cope
|
||
</taxonomicName>
|
||
, but our results (
|
||
<figureCitation id="77DC2A4EF748FFEDFCDF91A9CBE5BD87" box="[894,981,1188,1214]" captionStart="FIGURE 1. A" captionStartId="10.[151,255,1833,1857]" captionTargetBox="[379,1213,185,1804]" captionTargetId="figure@10.[379,1215,185,1807]" captionTargetPageId="10" captionText="FIGURE 1. A phylogeny of Alsophiini. Bayesian tree obtained from the combined data set of six genes (RAG 2, 12 S & 16 S rRNA, cytochrome b, ND 2 and ND 4; 3387 sites). Alsophis portoricensis portoricensis and A. p. anegadae have identical sequences at all genes sampled, and therefore the latter taxon is not shown. Values are ML bootstrap values above 70 % followed by Bayesian posterior probabilities above 90 %. The generic taxonomy in this tree reflects usage prior to this study and shows paraphyly and polyphyly of Alsophis (blue), Arrhyton (purple), and Antillophis (orange). See Table 1 and Figure 4 for the new classification proposed here." httpUri="https://zenodo.org/record/187019/files/figure.png" pageId="16" pageNumber="17">Figs. 1</figureCitation>
|
||
and
|
||
<figureCitation id="77DC2A4EF748FFEDFBB291A9CC14BD87" box="[1043,1060,1188,1214]" captionStart="FIGURE 4. A" captionStartId="15.[151,255,1783,1807]" captionTargetBox="[169,1429,197,1741]" captionTargetId="figure@15.[169,1429,197,1745]" captionTargetPageId="15" captionText="FIGURE 4. A timetree of Alsophiini. Divergence times and credibility / confidence intervals are shown in Table 3. Plei = Pleistocene. The generic taxonomy in this tree reflects the new classification proposed here and detailed in Table 1." httpUri="https://zenodo.org/record/187022/files/figure.png" pageId="16" pageNumber="17">4</figureCitation>
|
||
) refute that classification (see Remarks in
|
||
<taxonomicName id="28E74D48F748FFEDFE8591C6C9E3BDDD" box="[292,467,1227,1252]" class="Reptilia" family="Colubridae" genus="Hypsirhynchus" kingdom="Animalia" order="Squamata" pageId="16" pageNumber="17" phylum="Chordata" rank="genus">
|
||
<emphasis id="DD93EAD9F748FFEDFE8591C6C9E3BDDD" box="[292,467,1227,1252]" italics="true" pageId="16" pageNumber="17">Hypsirhynchus</emphasis>
|
||
</taxonomicName>
|
||
).
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |