179 lines
14 KiB
XML
179 lines
14 KiB
XML
<document id="B6FEA3FA36386440FE11965C9F3F9977" ID-DOI="10.3897/mycokeys.107.125549" ID-publisher-id="125549" URI-arpha="3EA0E723-E6FC-58B0-8491-ED4CC2FBAB87" article-type="research-article" checkinTime="1723223129036" checkinUser="pensoft" docAuthor="Tedersoo, Leho, Magurno, Franco, Alkahtani, Saad & Mikryukov, Vladimir" docDate="2024" docId="6227D9416F9F51398DEEA97F9BE5A65B" docLanguage="en" docName="MycoKeys 107: 249-271" docOrigin="MycoKeys 107" docSource="https://mycokeys.pensoft.net/article/125549/download/xml/" docStyle="DocumentStyle:PensoftTaxPub.0000.journal_article.mycokeys" docStyleName="PensoftTaxPub.0000.journal_article.mycokeys" docTitle="Parniguaceae Tedersoo 2024, fam. nov." docType="treatment" docVersion="1" dtd-version="3.0" lastPageNumber="271" masterDocId="3EA0E723E6FC58B08491ED4CC2FBAB87" masterDocTitle="Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)" masterLastPageNumber="271" masterPageNumber="249" pageNumber="249" updateTime="1723223268898" updateUser="pensoft">
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<mods:mods id="413341F6891AC5F1255917929A3B333A" xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo id="2E12D02F6990F6F5823E76133547115C">
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<mods:title id="5A457BC35BA31BD767972B4C14C10C47">Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)</mods:title>
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</mods:titleInfo>
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<mods:name id="5EB3A63EE1B638A55313AAD545A9EEF7" type="personal">
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<mods:role id="40C17D9CE4395AA2BED4941BBC472F1D">
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<mods:roleTerm id="CA5CD5CB4B366C0F1750A82749202D59">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="A60931F3EE79A5B01D6AC4F14DD34961">Tedersoo, Leho</mods:namePart>
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<mods:affiliation id="CCB5A41FF4A0A3F3420123FA628B0C0B">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia & Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="2C09AA1DD46A3FD035755E0BAC342784" type="personal">
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<mods:role id="AD65769C6EF06DCEFACE4268DA9D1429">
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<mods:roleTerm id="EED925DB24C08FCC4B8E63CAA5269ED5">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="10BA35895AEDD86FFE6059EC23BCD39B">Magurno, Franco</mods:namePart>
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<mods:nameIdentifier id="F3AA3795A0959955701A1A8D912D4E2B" type="ORCID">0000-0002-3117-8149</mods:nameIdentifier>
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<mods:affiliation id="242A200E88789778A3DC791FDB1C1F75">Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Jagiellońska 28, 40 - 032 Katowice, Poland</mods:affiliation>
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</mods:name>
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<mods:name id="7A15BE62558FCB54EC2FD092E32A2635" type="personal">
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<mods:role id="239FEA82CCD244C4747216F77C08EE7E">
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<mods:roleTerm id="6CADAED5D98644A3EF091ED8FC9AEA76">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="14A03FF334D800AA01FC9691BA5B1CD5">Alkahtani, Saad</mods:namePart>
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<mods:nameIdentifier id="6DF5E38AEC92F01EC9196A06DB951BDA" type="ORCID">0000-0001-7381-5110</mods:nameIdentifier>
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<mods:affiliation id="D447FFF9782CF22CE9B68778B93CA9C0">Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="3E9D6E770693192941A5AC5B7771FDF6" type="personal">
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<mods:roleTerm id="7A2024079532598CD3F8D199E12DA7EB">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="2973E59CA6EB9B90625C0ADAE72F1DE2">Mikryukov, Vladimir</mods:namePart>
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<mods:nameIdentifier id="E6A558EFEF4801B8E12E2DF87C7B51EA" type="ORCID">0000-0003-2786-2690</mods:nameIdentifier>
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<mods:affiliation id="B868FD28956F56BC2C2320616408A182">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia</mods:affiliation>
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</mods:name>
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<mods:typeOfResource id="D5470BD042C75C72238ED922E690505E">text</mods:typeOfResource>
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<mods:titleInfo id="4FA3F39A020F6EDFF079F62C5F9D6DBD">
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<mods:title id="CFA444E65A9CBD5514C60845D78DBD8D">MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part id="0FC12BB095BA15F615EE3195CC0193F8">
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<mods:date id="71D3B7B51433E021EBF5D3BDE819769A">2024</mods:date>
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<mods:detail id="7F4A76D557DCA25360A6FE49A229F690" type="pubDate">
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<mods:number id="601AC793B55D89306AA913D3161587AE">2024-08-09</mods:number>
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</mods:detail>
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<mods:detail id="3B1F51D91DB4537217B85AAD5A2E2E51" type="volume">
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<mods:number id="608DA39922B457B916187DC13A4BE4CB">107</mods:number>
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</mods:detail>
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<mods:extent id="D8364F0CD4D6534CFAE026A3341FF7B3" unit="page">
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<mods:start id="8EDB10B7BC17B334D7C245F627377E97">249</mods:start>
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<mods:end id="E6CF7375F8C51356904F53A36A0084D6">271</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:classification id="E18A21268C5EC16AA3F0CC8FDCC16C95">journal article</mods:classification>
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<mods:identifier id="71078ECBE6012BEACF1377C52280942E" type="DOI">10.3897/mycokeys.107.125549</mods:identifier>
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</mods:mods>
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<treatment id="6227D9416F9F51398DEEA97F9BE5A65B" ID-arpha="6227D941-6F9F-5139-8DEE-A97F9BE5A65B" ID-mycobank="853609" LSID="urn:lsid:plazi:treatment:6227D9416F9F51398DEEA97F9BE5A65B" httpUri="http://treatment.plazi.org/id/6227D9416F9F51398DEEA97F9BE5A65B">
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<subSubSection id="26B857B0664F984AF293C5D5F1CE4D29" type="nomenclature">
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<paragraph id="4DB6BF40BD5E90149A7B9C423C49B664">
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<taxonomicName id="EB439DC4F348C5C7F257CA6A42C479FF" authority="Tedersoo" authorityName="Tedersoo" authorityYear="2024" family="Parniguaceae" kingdom="Fungi" order="Parniguales" rank="family" status="fam. nov.">Parniguaceae Tedersoo</taxonomicName>
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<taxonomicNameLabel id="53738C27CA7CCB1F3D15968C3FE0D2DF" rank="family">fam. nov.</taxonomicNameLabel>
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0ESHBK" type="type genus">
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<paragraph id="5E90B38B4EEC92569E755F17B09EDBD3">
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<heading id="31AB46EEF51CBAD81AD404E055E483F9" reason="title">
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<typeStatus id="7332BE807BAA3DEF6FE77CB56EAC137B">Type</typeStatus>
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genus.
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</heading>
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</paragraph>
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<paragraph id="FD964D4349E15113F8F1568E3BF6094D">
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<taxonomicName id="48AEA5ABB4406E20162828D5A44CF9D2" authority="Tedersoo." authorityName="Tedersoo." class="Magnoliopsida" family="Dipterocarpaceae" genus="Parnigua" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="genus">
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<emphasis id="DD5CA2C74983E1C81334E50E8E56E0B5" italics="true">Parnigua</emphasis>
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Tedersoo.
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</taxonomicName>
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0E6HBK" type="description">
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<paragraph id="D2C63989E7CFFB2B493C53DE31E1B4D8">
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<heading id="820485F91CADADA9678D4F76AC159B5A" reason="title">Description.</heading>
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</paragraph>
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<paragraph id="D5A624A27B75651BD2CF57952798A411">
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Covers the monophyletic group in
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<tp_taxon-name id="70B99CFB203D5CA7DC56A5D5A08FDB87">
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<tp_taxon-name-part id="91AF3DDEA8DBEE020910D23CE2C9FC1D" taxon-name-part-type="order">Parniguales</tp_taxon-name-part>
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</tp_taxon-name>
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(Fig.
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<figureCitation id="A1D150A1BD49896471C1992E34A99BAD" captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Phylogenetic position of genera and genus-level groups of Endogonomycetes based on Maximum Likelihood analysis of SSU- 5.8 S-LSU sequences. The clades are collapsed, with the number of sequences included in parentheses. Question marks above branches indicate low ultra-rapid bootstrap support (< 95). Orders are highlighted in different colours. The uncollapsed phylogram is given in Suppl. material 3." figureDoi="10.3897/mycokeys.107.125549.figure2" httpUri="https://binary.pensoft.net/fig/1111389">2</figureCitation>
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). Phylogenetically delimited as the least inclusive clade covering sequence accessions EUK 1635261, EUK 1602353, EUK 1602857 and EUK 1602732 (Suppl. material
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<xref id="00EA47D0FF84C0B7CD3AA235A2E8949A" ref-type="supplementary-material" rid="S3">3</xref>
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).
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0ESIBK" type="notes">
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<paragraph id="8780D2F7AE2B59B203443C6F70C130E4">
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<heading id="DEA28730A9464E01F70EF376AB89C947" reason="title">Notes.</heading>
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</paragraph>
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<paragraph id="BAFD35F680EAA21529B2E5183A0F15E3">
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Recognised based on
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<abbrev id="ABBRID0EYIBK" xlink_title="environmental DNA">eDNA</abbrev>
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sequences only. Currently represented by
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<taxonomicName id="199F8EEF0D280DFE840C8B7E1CB5FEFC" class="Magnoliopsida" family="Dipterocarpaceae" genus="Parnigua" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="genus">
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<emphasis id="964FAF104F1A854E180D02558A4B1BDF" italics="true">Parnigua</emphasis>
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</taxonomicName>
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and another potentially genus-level group, which is characterised by sequences EUK 0016514 (
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<abbrev id="ABBRID0EDJBK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="B14A53B00534B669CA7DAAEF6DD23079" country="Sweden" lsid="urn:lsid:biocol.org:col:15668" name="Department of Botany, Swedish Museum of Natural History" type="Herbarium">S</collectionCode>
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1218, urban park soil in Qujing,
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<collectingCountry id="69D7EDC942BC3B63CB362A2A47F45273" name="China">China</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EKJBK" specific-use="{"type":"Point","coordinates":[103.744970,25.526190]}">
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<geoCoordinate id="9263F8DE7BB4B68B094AD59D9F3E08E8" degrees="25.52619" direction="north" orientation="latitude" precision="1" value="25.52619">25.52619 ° N</geoCoordinate>
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,
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<geoCoordinate id="69F406144B85836E08EFF4C87D812C1E" degrees="103.74497" direction="east" orientation="longitude" precision="1" value="103.74497">103.74497 ° E</geoCoordinate>
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</named-content>
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), EUK 0028452 (
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<abbrev id="ABBRID0EPJBK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="3F3F3FABD7E8C30272ACD7E31AD7BD21" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
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3060,
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<taxonomicName id="A18EAE117B77B95A3B8A676A1BA66618" class="Magnoliopsida" family="Dipterocarpaceae" genus="Vateria" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="species" species="indica">
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<emphasis id="D8D7B73D89FB776350E40A2029D50F4A" italics="true">Vateria indica</emphasis>
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</taxonomicName>
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forest in Hebri,
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<collectingCountry id="A3E7D27A143898172203580437030082" name="India">India</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EBKBK" specific-use="{"type":"Point","coordinates":[75.022130,13.454370]}">
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<geoCoordinate id="DF68A0270E34FF802274C300A0192257" degrees="13.45437" direction="north" orientation="latitude" precision="1" value="13.45437">13.45437 ° N</geoCoordinate>
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,
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<geoCoordinate id="132F00267CB4292514A1091992F5351D" degrees="75.02213" direction="east" orientation="longitude" precision="1" value="75.02213">75.02213 ° E</geoCoordinate>
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</named-content>
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), EUK 1602857 (
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<abbrev id="ABBRID0EGKBK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="4A910770298E96587EC3A4DBC962837B" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
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5771, grassland soil in Hino,
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<collectingCountry id="17C1B13D5A0AFA021884396C2F45AC3C" name="Estonia">Estonia</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0ENKBK" specific-use="{"type":"Point","coordinates":[27.226490,57.575660]}">
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<geoCoordinate id="D0D83B83B3F49B50DC89483E46A6C998" degrees="57.57566" direction="north" orientation="latitude" precision="1" value="57.57566">57.57566 ° N</geoCoordinate>
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,
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<geoCoordinate id="78269AB46A5222541C2D9049F387EB3F" degrees="27.22649" direction="east" orientation="longitude" precision="1" value="27.22649">27.22649 ° E</geoCoordinate>
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</named-content>
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), EUK 1602732 (
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<abbrev id="ABBRID0ESKBK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="5D73AC61A26A6BBFD38FB0BE9B6B8244" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
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5777, grassland soil in Eoste,
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<collectingCountry id="E4E30FEA196A94DD7A1E18856D031B1E" name="Estonia">Estonia</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EZKBK" specific-use="{"type":"Point","coordinates":[27.084040,58.114270]}">
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<geoCoordinate id="0067B915BE0BD35BD4D2B1615F3B29CE" degrees="58.11427" direction="north" orientation="latitude" precision="1" value="58.11427">58.11427 ° N</geoCoordinate>
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,
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<geoCoordinate id="010177903E325725D658C07DFD346C73" degrees="27.08404" direction="east" orientation="longitude" precision="1" value="27.08404">27.08404 ° E</geoCoordinate>
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</named-content>
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) and EUK 1602733 (
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<abbrev id="ABBRID0E5KBK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="11B38C2CB90F8FC19589D57269687AC7" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
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5816,
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<taxonomicName id="6A6353BA94F0F5BA37D88020F6616980" class="Magnoliopsida" family="Fabaceae" genus="Trifolium" kingdom="Plantae" order="Fabales" phylum="Tracheophyta" rank="species" species="pratense">
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<emphasis id="95DB7972DDE6A5294C595ED7270A9B1A" italics="true">Trifolium pratense</emphasis>
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</taxonomicName>
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cropland soil in Hermani,
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<collectingCountry id="5989C35902385D6FADFC52EE5580F521" name="Estonia">Estonia</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EQLBK" specific-use="{"type":"Point","coordinates":[25.756390,58.807050]}">
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<geoCoordinate id="3B0EF4B4C1CA8E87122C322FBFA8CC43" degrees="58.80705" direction="north" orientation="latitude" precision="1" value="58.80705">58.80705 ° N</geoCoordinate>
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,
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<geoCoordinate id="CA9F5D353DA6721B20FAF8A9FD3244EC" degrees="25.75639" direction="east" orientation="longitude" precision="1" value="25.75639">25.75639 ° E</geoCoordinate>
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</named-content>
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).
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |