318 lines
34 KiB
XML
318 lines
34 KiB
XML
<document id="9F9B5A2D78FEAB4D8DDD5B002428A2F3" ID-DOI="10.1093/zoolinnean/zlad063" ID-ISSN="0024-4082" ID-Zenodo-Dep="10470258" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="felipe" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_approvedBy="felipe" IM.taxonomicNames_approvedBy="felipe" IM.treatmentCitations_approvedBy="felipe" IM.treatments_approvedBy="felipe" checkinTime="1704718315156" checkinUser="plazi" docAuthor="Mizerovská, Daniela, Martynov, Aleksey A., Mikula, Ondřej, Bryjová, Anna, Meheretu, Yonas, Lavrenchenko, Leonid A. & Bryja, Josef" docDate="2023" docId="853D1219FFFCFFADEBD7EA1FB75EF80E" docLanguage="en" docName="zlad063.pdf" docOrigin="Zoological Journal of the Linnean Society 199 (4)" docSource="http://dx.doi.org/10.1093/zoolinnean/zlad063" docStyle="DocumentStyle:4F230B9370E98E256D973D6DFB57F36C.5:ZoolJLinnSoc.2023-.journal_article" docStyleId="4F230B9370E98E256D973D6DFB57F36C" docStyleName="ZoolJLinnSoc.2023-.journal_article" docStyleVersion="4" docTitle="Otomys typus Heuglin 1877" docType="treatment" docVersion="3" lastPageNumber="1073" masterDocId="79046A61FFF2FFA3E839E84DB432FFBB" masterDocTitle="Genomic diversity, evolutionary history, and species limits of the endemic Ethiopian laminate-toothed rats (genus Otomys, Rodentia: Muridae)" masterLastPageNumber="1077" masterPageNumber="1059" pageNumber="1073" updateTime="1704748301190" updateUser="felipe">
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<mods:title id="761643B51E1B108BFCDE92D955F1C6A3">Genomic diversity, evolutionary history, and species limits of the endemic Ethiopian laminate-toothed rats (genus Otomys, Rodentia: Muridae)</mods:title>
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<mods:namePart id="30EE973A0919C3D4450D6AEC69CAC377">Mizerovská, Daniela</mods:namePart>
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<mods:namePart id="324A5C6D9B8517EA9C3DEFC2ED290358">Martynov, Aleksey A.</mods:namePart>
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<mods:affiliation id="A6EE3FBF84456C81AD696FDBF3D36A83">A. N. Severtsov Institute of Ecology and Evolution of the Russian Academy of Sciences, Moscow, Russia</mods:affiliation>
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<mods:namePart id="F8A537195A043ED8C8B5B75FDB9A8DEC">Mikula, Ondřej</mods:namePart>
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<mods:namePart id="A2F209ED70F4B88A4DA90CE972DF3406">Bryjová, Anna</mods:namePart>
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<mods:namePart id="893679F47171B051FA851257759678C7">Meheretu, Yonas</mods:namePart>
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<mods:affiliation id="D4877800691E5C98274946E0E92312C3">Institute of Vertebrate Biology of the Czech Academy of Sciences, Brno, Czech Republic & Department of Biology and Institute of Mountain Research and Development, Mekelle University, Mekelle, Tigray, Ethiopia & Department of Wildlife, Fish, and Environmental Studies, Swedish University of Agricultural Sciences, Umeå, Sweden</mods:affiliation>
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<mods:namePart id="5B53A67712A5E6DA892DBE91C716BF23">Lavrenchenko, Leonid A.</mods:namePart>
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<mods:affiliation id="112FC59ACEAB4FBFB648629817A3604F">A. N. Severtsov Institute of Ecology and Evolution of the Russian Academy of Sciences, Moscow, Russia & Institute of Vertebrate Biology of the Czech Academy of Sciences, Brno, Czech Republic & Department of Botany and Zoology, Faculty of Science, Masaryk University, Brno, Czech Republic</mods:affiliation>
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<mods:nameIdentifier id="306353169A36E9D816BCC6919577D5B7" type="email">bryja@ivb.cz</mods:nameIdentifier>
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<mods:namePart id="2B7EFFA5CA9720B27544E8286A002A6F">Bryja, Josef</mods:namePart>
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<mods:typeOfResource id="3EBFC928B8C40306AB24177D8194B368">text</mods:typeOfResource>
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<mods:title id="B0064ADCE33CD21ED7740889146AEB18">Zoological Journal of the Linnean Society</mods:title>
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<mods:part id="A600FF23814BAEF62351FE5763195540">
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<mods:date id="B0DEB77FAA96F0F83262EC3FAE4F6910">2023</mods:date>
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<mods:number id="14C1B6B8E8A61ADA464E35A7A5E1F750">2023-08-25</mods:number>
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<mods:number id="DEE91EF64ACD36D5BD651EDC4584A9BE">199</mods:number>
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<mods:number id="B3043CDEED560465FAACC00BCC590361">4</mods:number>
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<mods:start id="B711E7939C994AA0B31B5CFF0FB754E2">1059</mods:start>
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<mods:end id="F99764F61F27B7951354427BC1ADF197">1077</mods:end>
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<mods:identifier id="F43F199C483DAD77F670AC98E488D93A" type="DOI">10.1093/zoolinnean/zlad063</mods:identifier>
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<mods:identifier id="D81AD6358E4BF39C03439910FA746934" type="ISSN">0024-4082</mods:identifier>
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<treatment id="853D1219FFFCFFADEBD7EA1FB75EF80E" ID-DOI="http://doi.org/10.5281/zenodo.10470233" ID-Zenodo-Dep="10470233" LSID="urn:lsid:plazi:treatment:853D1219FFFCFFADEBD7EA1FB75EF80E" httpUri="http://treatment.plazi.org/id/853D1219FFFCFFADEBD7EA1FB75EF80E" lastPageNumber="1073" pageId="14" pageNumber="1073">
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<subSubSection id="458EF084FFFCFFADEBD7EA1FB7EDFD2B" pageId="14" pageNumber="1073" type="nomenclature">
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<paragraph id="0D2BA30FFFFCFFADEBD7EA1FB13CFDD7" blockId="14.[1006,1294,594,620]" box="[1006,1294,594,620]" pageId="14" pageNumber="1073">
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<heading id="56631463FFFCFFADEBD7EA1FB13CFDD7" bold="true" box="[1006,1294,594,620]" centered="true" fontSize="11" level="2" pageId="14" pageNumber="1073" reason="2">
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<taxonomicName id="CA94D88CFFFCFFADEBD7EA1FB13CFDD7" ID-CoL="4B7L9" authority="Heuglin 1877" authorityName="Heuglin" authorityYear="1877" box="[1006,1294,594,620]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="typus">
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<emphasis id="3FE07F1DFFFCFFADEBD7EA1FB13CFDD7" bold="true" box="[1006,1294,594,620]" pageId="14" pageNumber="1073">
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<emphasis id="3FE07F1DFFFCFFADEBD7EA1FB045FDD7" bold="true" box="[1006,1143,594,620]" italics="true" pageId="14" pageNumber="1073">Otomys typus</emphasis>
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Heuglin 1877
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</emphasis>
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</taxonomicName>
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</heading>
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</paragraph>
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<paragraph id="0D2BA30FFFFCFFADEB00EA35B7EDFD2B" blockId="14.[825,1475,632,1001]" box="[825,991,632,656]" pageId="14" pageNumber="1073">Typical Vlei Rat</paragraph>
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</subSubSection>
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<subSubSection id="458EF084FFFCFFADEB00EAD5B109FC52" pageId="14" pageNumber="1073" type="reference_group">
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<paragraph id="0D2BA30FFFFCFFADEB00EAD5B166FC30" blockId="14.[825,1475,632,1001]" pageId="14" pageNumber="1073">
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<taxonomicName id="CA94D88CFFFCFFADEB00EAD5B0BFFD0B" authority="Heuglin 1877: 76" authorityName="Heuglin" authorityPageNumber="76" authorityYear="1877" box="[825,1165,664,688]" class="Mammalia" family="Muridae" genus="Oreomys" higherTaxonomySource="GBIF" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="typus">
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<emphasis id="3FE07F1DFFFCFFADEB00EAD5B7F9FD0B" box="[825,971,664,688]" italics="true" pageId="14" pageNumber="1073">Oreomys typus</emphasis>
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Heuglin 1877: 76
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</taxonomicName>
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;
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<bibRefCitation id="6905DEFEFFFCFFADECA0EAD5B167FD0B" author="Thomas O" box="[1177,1365,664,688]" pageId="14" pageNumber="1073" pagination="181 - 7" refId="ref18583" refString="Thomas O. On a collection of small mammals made by Mr. F. J. Jackson in eastern Africa. Proceedings of the Zoological Society of London 1891; 1891: 181 - 7." type="journal article" year="1891">Thomas 1891:185</bibRefCitation>
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(new species description of
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<taxonomicName id="CA94D88CFFFCFFADEBCEEAFAB070FD75" ID-CoL="63HZL" authorityName="F. Cuvier" authorityYear="1824" box="[1015,1090,695,718]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="genus">
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<emphasis id="3FE07F1DFFFCFFADEBCEEAFAB070FD75" box="[1015,1090,695,718]" italics="true" pageId="14" pageNumber="1073">Otomys</emphasis>
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</taxonomicName>
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, retention of
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<typeStatus id="D22F1DADFFFCFFADECF1EAF5B133FD6B" box="[1224,1281,696,720]" pageId="14" pageNumber="1073">typus</typeStatus>
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in separate genus).
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<taxonomicName id="CA94D88CFFFCFFADEB00EA9AB068FD55" ID-CoL="4B7L9" authority="Thomas 1906" authorityName="Thomas" authorityYear="1906" box="[825,1114,726,750]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="typus">
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<emphasis id="3FE07F1DFFFCFFADEB00EA9AB7F3FD55" box="[825,961,727,750]" italics="true" pageId="14" pageNumber="1073">
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Otomys
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<typeStatus id="D22F1DADFFFCFFADEBB4EA9AB7F3FD55" box="[909,961,727,750]" pageId="14" pageNumber="1073">typus</typeStatus>
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</emphasis>
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Thomas 1906
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</taxonomicName>
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,
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<bibRefCitation id="6905DEFEFFFCFFADEC5FEA9BB12AFD55" author="Wroughton RC" box="[1126,1304,726,750]" pageId="14" pageNumber="1073" pagination="264 - 78" refId="ref18732" refString="Wroughton RC. Notes on the genus Otomys. Annals and Magazine of Natural History, series 1906; 7: 264 - 78." type="journal article" year="1906">Wroughton 1906</bibRefCitation>
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,
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<bibRefCitation id="6905DEFEFFFCFFADED1FEA9BB18EFD55" author="Dollman G" box="[1318,1468,726,750]" pageId="14" pageNumber="1073" pagination="149 - 70" refId="ref16065" refString="Dollman G. IX. - On the swamp-rats (Otomys) of East Africa. Annals and Magazine of Natural History 1915; 15: 149 - 70." type="journal article" year="1915">Dollman 1915</bibRefCitation>
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,
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<bibRefCitation id="6905DEFEFFFCFFADEB00EABBB7D6FCB5" author="Misonne X" box="[825,996,758,782]" pageId="14" pageNumber="1073" refId="ref17143" refString="Misonne X. Part 6, Order Rodentia. In: Meester J, Setzer HW (eds.), The Mammals of Affica: An Identification Manual. Washington, D. C: Smithsonian Institution Press, 1974." type="book" year="1974">Misonne (1974)</bibRefCitation>
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(no indication rank);
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<bibRefCitation id="6905DEFEFFFCFFADECFCEABBB145FCB5" author="Yalden DW & Largen MJ & Kock D" box="[1221,1399,758,782]" pageId="14" pageNumber="1073" pagination="1 - 118" refId="ref18779" refString="Yalden DW, Largen MJ, Kock D. Catalogue of the mammals of Ethiopia. 2. Insectivora and Rodentia. Monitore Zoologico Italiano, Supplemento 1976; 8: 1 - 118." type="journal article" year="1976">
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Yalden
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<emphasis id="3FE07F1DFFFCFFADED29EABBB10CFCB5" box="[1296,1342,758,782]" italics="true" pageId="14" pageNumber="1073">et al.</emphasis>
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1976
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</bibRefCitation>
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(no indication rank);
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<bibRefCitation id="6905DEFEFFFCFFADEBEFEB58B09DFC96" author="Corbet GB & Hill JE" box="[982,1199,789,813]" pageId="14" pageNumber="1073" refId="ref15782" refString="Corbet GB, Hill JE. A World List of Mammalian Species. London: British Museum (Natural History), 1980." type="book" year="1980">Corbet and Hill 1980</bibRefCitation>
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,
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<bibRefCitation id="6905DEFEFFFCFFADEC80EB58B0DFFC96" author="Corbet GB & Hill JE" box="[1209,1261,789,813]" pageId="14" pageNumber="1073" refId="ref15806" refString="Corbet GB, Hill JE. A World List of Mammalian Species, 2 nd edn. London: British Museum (Natural History), 1986." type="book" year="1986">1986</bibRefCitation>
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,
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<bibRefCitation id="6905DEFEFFFCFFADECC1EB58B11EFC96" author="Corbet GB & Hill JE" box="[1272,1324,789,813]" pageId="14" pageNumber="1073" refId="ref15834" refString="Corbet GB, Hill JE. A World List of Mammalian Species, 3 rd edn. London: British Museum (Natural History), 1991." type="book" year="1991">1991</bibRefCitation>
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(no indication of synonym); Honacki
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<emphasis id="3FE07F1DFFFCFFADEC12EB78B06EFCF7" box="[1067,1116,820,844]" italics="true" pageId="14" pageNumber="1073">et al.</emphasis>
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1982 (no indication of synonym), Musser and Carleton 1993 (allocation of synonyms without rank);
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<bibRefCitation id="6905DEFEFFFCFFADEB47EB3EB01DFC30" author="Yalden DW & Largen MJ & Kock D" box="[894,1071,883,907]" pageId="14" pageNumber="1073" pagination="73 - 164" refId="ref18814" refString="Yalden DW, Largen MJ, Kock D, et al. Catalogue of the mammals of Ethiopia and Eritrea. 7. Revised checklist, zoogeography and conservation. Tropical Zoology 1996; 9: 73 - 164." type="journal article" year="1996">
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Yalden
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<emphasis id="3FE07F1DFFFCFFADEBF1EB39B7C5FC30" box="[968,1015,883,907]" italics="true" pageId="14" pageNumber="1073">et al.</emphasis>
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1996
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</bibRefCitation>
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(no indication of synonym).
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</paragraph>
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<paragraph id="0D2BA30FFFFCFFADEB00EBDEB109FC52" blockId="14.[825,1475,632,1001]" pageId="14" pageNumber="1073">
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<taxonomicName id="CA94D88CFFFCFFADEB00EBDEB78CFC11" ID-CoL="4B7L9" authorityName="Thomas" authorityYear="1906" box="[825,958,915,938]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="typus">
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<emphasis id="3FE07F1DFFFCFFADEB00EBDEB78CFC11" box="[825,958,915,938]" italics="true" pageId="14" pageNumber="1073">Otomys typus</emphasis>
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</taxonomicName>
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<taxonomicName id="CA94D88CFFFCFFADEBFDEBDEB05FFC11" ID-CoL="4B7L9" authority="Allen 1939" authorityName="Allen" authorityYear="1939" box="[964,1133,914,938]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="typus">
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<emphasis id="3FE07F1DFFFCFFADEBFDEBDEB7CAFC11" box="[964,1016,915,938]" italics="true" pageId="14" pageNumber="1073">
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<typeStatus id="D22F1DADFFFCFFADEBFDEBDEB7CAFC11" box="[964,1016,915,938]" pageId="14" pageNumber="1073">typus</typeStatus>
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</emphasis>
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<bibRefCitation id="6905DEFEFFFCFFADEBC4EBDFB05FFC11" author="Allen GM" box="[1021,1133,914,938]" pageId="14" pageNumber="1073" pagination="1 - 763" refId="ref15278" refString="Allen GM. A checklist of African mammals. Bulletin of the Museum of Comparative Zoology at Harvard College 1939; 83: 1 - 763." type="journal article" year="1939">Allen 1939</bibRefCitation>
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</taxonomicName>
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,
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<bibRefCitation id="6905DEFEFFFCFFADEC41EBDFB13DFC11" author="Ellerman JR" box="[1144,1295,914,938]" pageId="14" pageNumber="1073" refId="ref16142" refString="Ellerman JR. The Families and Genera of Living Rodents. Vol II - Muridae. London: British Museum, 1941." type="book" year="1941">Ellerman 1941</bibRefCitation>
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,
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<bibRefCitation id="6905DEFEFFFCFFADED23EBDFB18AFC11" author="Bohmann LV" box="[1306,1464,914,938]" pageId="14" pageNumber="1073" pagination="1 - 80" refId="ref15489" refString="Bohmann LV. Die afrikanische Nagergauung Otomys F. Cuvier. Zeitschriss fur Saugetierkunde 1952; 18: 1 - 80." type="journal article" year="1952">Bohmann 1952</bibRefCitation>
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.
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<taxonomicName id="CA94D88CFFFCFFADEB00EBFFB7EFFC72" ID-CoL="4B7KM" baseAuthorityName="Brants" baseAuthorityYear="1827" box="[825,989,946,969]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="irroratus">
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<emphasis id="3FE07F1DFFFCFFADEB00EBFFB7EFFC72" box="[825,989,946,969]" italics="true" pageId="14" pageNumber="1073">Otomys irroratus</emphasis>
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</taxonomicName>
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(
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<taxonomicName id="CA94D88CFFFCFFADEBD7EBFFB010FC72" ID-CoL="4B7L9" authorityName="Allen" authorityYear="1939" box="[1006,1058,946,969]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="typus">
|
|
<emphasis id="3FE07F1DFFFCFFADEBD7EBFFB010FC72" box="[1006,1058,946,969]" italics="true" pageId="14" pageNumber="1073">
|
|
<typeStatus id="D22F1DADFFFCFFADEBD7EBFFB010FC72" box="[1006,1058,946,969]" pageId="14" pageNumber="1073">typus</typeStatus>
|
|
</emphasis>
|
|
</taxonomicName>
|
|
)
|
|
<bibRefCitation id="6905DEFEFFFCFFADEC0BEBFFB081FC71" author="Delany MJ" box="[1074,1203,946,970]" pageId="14" pageNumber="1073" refId="ref15904" refString="Delany MJ. The Rodents of Uganda. London: Trustees of the British Museum (Natural History), 1975." type="book" year="1975">Delany 1975</bibRefCitation>
|
|
(new name combination);
|
|
<bibRefCitation id="6905DEFEFFFCFFADEB00EB9CB79DFC52" author="Peuer F" box="[825,943,977,1001]" pageId="14" pageNumber="1073" pagination="215 - 22" refId="ref17561" refString="Peuer F. Les parentes des Otomys du Mont Oku (Cameroun) et des autres formes rapportees a O. irroratus (Brants, 1827) (Rodentia, Muridae). Bonner Zoologische Beitrage 1982; 33: 215 - 22." type="journal article" year="1982">Peưer 1982</bibRefCitation>
|
|
(allocation of synonym without rank).
|
|
</paragraph>
|
|
</subSubSection>
|
|
<subSubSection id="458EF084FFFCFFADEB00EC47B75EF80E" pageId="14" pageNumber="1073" type="materials_examined">
|
|
<paragraph id="0D2BA30FFFFCFFADEB00EC47B07EFB99" blockId="14.[825,1100,1034,1058]" box="[825,1100,1034,1058]" pageId="14" pageNumber="1073">
|
|
<materialsCitation id="BDFCA952FFFCFFADEB00EC47B07EFB99" box="[825,1100,1034,1058]" collectionCode="BMNH" pageId="14" pageNumber="1073" specimenCode="BMNH 2.9" specimenCount="1" typeStatus="holotype">
|
|
<emphasis id="3FE07F1DFFFCFFADEB00EC47B7ABFB99" box="[825,921,1034,1058]" italics="true" pageId="14" pageNumber="1073">
|
|
<typeStatus id="D22F1DADFFFCFFADEB00EC47B7A6FB99" box="[825,916,1034,1058]" pageId="14" pageNumber="1073" type="holotype">Holotype</typeStatus>
|
|
:
|
|
</emphasis>
|
|
<specimenCode id="5D320B74FFFCFFADEBA6EC46B027FB99" box="[927,1045,1034,1058]" collectionCode="BMNH" pageId="14" pageNumber="1073">BMNH 2.9</specimenCode>
|
|
.9.19.
|
|
</materialsCitation>
|
|
</paragraph>
|
|
<paragraph id="0D2BA30FFFFCFFADEB00EC09B0CEFBE0" blockId="14.[825,1276,1092,1116]" box="[825,1276,1092,1116]" pageId="14" pageNumber="1073">
|
|
<emphasis id="3FE07F1DFFFCFFADEB00EC09B789FBE7" box="[825,955,1092,1116]" italics="true" pageId="14" pageNumber="1073">Type locality:</emphasis>
|
|
Gonder Province, Simien Mts..
|
|
</paragraph>
|
|
<paragraph id="0D2BA30FFFFCFFADEB00EC3BB1F1F919" blockId="14.[825,1475,1142,1698]" pageId="14" pageNumber="1073">
|
|
<emphasis id="3FE07F1DFFFCFFADEB00EC3BB05EFB36" box="[825,1132,1142,1165]" italics="true" pageId="14" pageNumber="1073">
|
|
Taxonomic notes:
|
|
<taxonomicName id="CA94D88CFFFCFFADEBD1EC3BB05EFB36" authorityName="Allen" authorityYear="1939" box="[1000,1132,1142,1165]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="typus">Otomys typus</taxonomicName>
|
|
</emphasis>
|
|
is a monophyletic genomic clade, sister to
|
|
<taxonomicName id="CA94D88CFFFCFFADEBABECD8B7DCFB16" box="[914,1006,1173,1197]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="helleri">
|
|
<emphasis id="3FE07F1DFFFCFFADEBABECD8B797FB17" box="[914,933,1173,1196]" italics="true" pageId="14" pageNumber="1073">O</emphasis>
|
|
.
|
|
<emphasis id="3FE07F1DFFFCFFADEB8BECD8B7DCFB16" box="[946,1006,1173,1197]" italics="true" pageId="14" pageNumber="1073">helleri</emphasis>
|
|
</taxonomicName>
|
|
(
|
|
<figureCitation id="95AFBF8AFFFCFFADEC39ECD8B008FB16" box="[1024,1082,1173,1197]" captionStart="Figure 3" captionStartId="7.[113,178,1133,1157]" captionTargetBox="[115,1458,146,1104]" captionTargetId="figure-433@7.[114,1458,144,1105]" captionTargetPageId="7" captionText="Figure 3. ML tree of concatenated SNPs loci developed by ddÞD approach. Numbers above the branches indicate the bootstrap support; coloured bars correspond to six presumed Ethiopian species (for their distribution see Fig. 2B and C). The tree is based on the dataset of 5587 loci and 48 200 SNPs with a minimum 10% occupancy, but the trees from more filtered data had concordant topologies, only with progressively lower support of clades (not shown)." figureDoi="http://doi.org/10.5281/zenodo.10470264" httpUri="https://zenodo.org/record/10470264/files/figure.png" pageId="14" pageNumber="1073">Fig. 3</figureCitation>
|
|
). Both species are only weakly differentiated, both at their genomes and skull morphology, but we prefer to keep them as two allopatric species, awaiting further studies of their possible contact zones in central
|
|
<collectingCountry id="7583E39FFFFCFFADED0AECBEB1B8FAB0" box="[1331,1418,1267,1291]" name="Ethiopia" pageId="14" pageNumber="1073">Ethiopia</collectingCountry>
|
|
(
|
|
<figureCitation id="95AFBF8AFFFCFFADEDA5ECBEB774FA91" captionStart="Figure 2" captionStartId="6.[129,194,1297,1321]" captionTargetBox="[131,1473,147,1268]" captionTargetId="figure-73@6.[129,1473,144,1269]" captionTargetPageId="6" captionText="Figure 2. A, Cytb phylogeny of two groups (the TYPUS and SIMIENSIS groups) of endemic Ethiopian taxa from the O. typus complex. The numbers above the branches indicate BI posterior probability/ML bootstrap support.Maps show the distribution of the mitochondrial diversity in the Ethiopian SIMIENSIS group (B) and TYPUS group (C). Coloured circles indicate the localities with genetically characterized individuals; different colours correspond to six Ethiopian species marked by coloured bars on the right side of the phylogenetic tree.Stars of particular colours show the type localities (there are two stars for O. cheesmani; Dangila is the type locality, the paratype specimen was collected from Gojam). White dots are records of non-genotyped Otomys [based on Yalden et al. (1976, 1996) and the GBIF database; see more details in Bryja et al. (2019a)]. The shades of grey on the map indicate elevation." figureDoi="http://doi.org/10.5281/zenodo.10470262" httpUri="https://zenodo.org/record/10470262/files/figure.png" pageId="14" pageNumber="1073">Fig. 2</figureCitation>
|
|
). Specimens from the Chercher Mts. and Hirna (east of GRV) were assigned to
|
|
<taxonomicName id="CA94D88CFFFCFFADEBD6ED7FB076FAF2" authorityName="Allen" authorityYear="1939" box="[1007,1092,1330,1353]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="typus">
|
|
<emphasis id="3FE07F1DFFFCFFADEBD6ED7FB030FAF2" box="[1007,1026,1330,1353]" italics="true" pageId="14" pageNumber="1073">O</emphasis>
|
|
.
|
|
<emphasis id="3FE07F1DFFFCFFADEC29ED7FB076FAF2" box="[1040,1092,1330,1353]" italics="true" pageId="14" pageNumber="1073">typus</emphasis>
|
|
</taxonomicName>
|
|
based on morphometric analysis by
|
|
<bibRefCitation id="6905DEFEFFFCFFADEB00ED1CB030FAD2" author="Taylor PJ & Lavrenchenko LA & Carleton MD" box="[825,1026,1361,1385]" pageId="14" pageNumber="1073" pagination="1 - 66" refId="ref18434" refString="Taylor PJ, Lavrenchenko LA, Carleton MD, et al. Specific limits and emerging diversity pauerns in East African populations of laminate-toothed rats, genus Otomys (Muridae: Murinae: Otomyini): revision of the Otomys typus complex. Zootaxa 2011; 3024: 1 - 66." type="journal article" year="2011">
|
|
Taylor
|
|
<emphasis id="3FE07F1DFFFCFFADEBBBED1FB780FAD2" box="[898,946,1361,1385]" italics="true" pageId="14" pageNumber="1073">et al.</emphasis>
|
|
(2011)
|
|
</bibRefCitation>
|
|
, but they instead represent
|
|
<taxonomicName id="CA94D88CFFFCFFADED1BED1CB14EFAD2" box="[1314,1404,1361,1385]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="helleri">
|
|
<emphasis id="3FE07F1DFFFCFFADED1BED1CB14EFAD2" box="[1314,1404,1361,1385]" italics="true" pageId="14" pageNumber="1073">O. helleri</emphasis>
|
|
</taxonomicName>
|
|
, based on phylogeographic paưerns of other taxa (e.g.
|
|
<bibRefCitation id="6905DEFEFFFCFFADED20ED3DB75FFA13" author="Mizerovska D & Mikula O & Meheretu Y" pageId="14" pageNumber="1073" pagination="120031" refId="ref17234" refString="Mizerovska D, Mikula O, Meheretu Y, et al. Integrative taxonomic revision of the Ethiopian endemic rodent genus Stenocephalemys (Muridae: Murinae: Praomyini) with the description of two new species. Journal of Vertebrate Biology 2020; 69: 120031." type="journal article" year="2020">
|
|
Mizerovská
|
|
<emphasis id="3FE07F1DFFFCFFADEDADED3CB1F1FA33" box="[1428,1475,1392,1416]" italics="true" pageId="14" pageNumber="1073">et al.</emphasis>
|
|
2020
|
|
</bibRefCitation>
|
|
). We do not include
|
|
<taxonomicName id="CA94D88CFFFCFFADEC7EEDDDB0B6FA13" authorityName="Thomas" authorityYear="1902" box="[1095,1156,1424,1448]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="degeni">
|
|
<emphasis id="3FE07F1DFFFCFFADEC7EEDDDB0B6FA13" box="[1095,1156,1424,1448]" italics="true" pageId="14" pageNumber="1073">degeni</emphasis>
|
|
</taxonomicName>
|
|
as a synonym of
|
|
<taxonomicName id="CA94D88CFFFCFFADED0DEDDDB1B7FA1C" authorityName="Allen" authorityYear="1939" box="[1332,1413,1424,1447]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="typus">
|
|
<emphasis id="3FE07F1DFFFCFFADED0DEDDDB1B7FA1C" box="[1332,1413,1424,1447]" italics="true" pageId="14" pageNumber="1073">O. typus</emphasis>
|
|
</taxonomicName>
|
|
[contrary to
|
|
<bibRefCitation id="6905DEFEFFFCFFADEBB5EDE2B061FA7C" author="Taylor PJ & Lavrenchenko LA & Carleton MD" box="[908,1107,1455,1479]" pageId="14" pageNumber="1073" pagination="1 - 66" refId="ref18434" refString="Taylor PJ, Lavrenchenko LA, Carleton MD, et al. Specific limits and emerging diversity pauerns in East African populations of laminate-toothed rats, genus Otomys (Muridae: Murinae: Otomyini): revision of the Otomys typus complex. Zootaxa 2011; 3024: 1 - 66." type="journal article" year="2011">
|
|
Taylor
|
|
<emphasis id="3FE07F1DFFFCFFADEBEDEDFDB036FA7C" box="[980,1028,1455,1479]" italics="true" pageId="14" pageNumber="1073">et al.</emphasis>
|
|
(2011)
|
|
</bibRefCitation>
|
|
and previous taxonomic revisions]. This taxon was described by
|
|
<bibRefCitation id="6905DEFEFFFCFFADEC5EED83B138FA5D" author="Thomas O" box="[1127,1290,1486,1510]" pageId="14" pageNumber="1073" pagination="308 - 16" refId="ref18620" refString="Thomas O. On a collection of mammals from Abyssinia, including some from Lake Tsana, collected by Mr. Edward Degen. Proceedings of the Zoological Society of London 1902; 1902: 308 - 16." type="journal article" year="1902">Thomas (1902)</bibRefCitation>
|
|
from Gombitchu (8000 ss =
|
|
<quantity id="CA6C0EEAFFFCFFADEB90EDA3B7C5F9BE" box="[937,1015,1518,1542]" metricMagnitude="3" metricUnit="m" metricValue="2.438" pageId="14" pageNumber="1073" unit="m" value="2438.0">2438 m</quantity>
|
|
a.s.l.) in Shoa, not far from
|
|
<collectingRegion id="CF506DEDFFFCFFADED37EDA3B1A1F9BD" box="[1294,1427,1518,1542]" country="Ethiopia" name="Adis Abeba" pageId="14" pageNumber="1073">Addis Ababa</collectingRegion>
|
|
. The morphological analysis of the
|
|
<typeStatus id="D22F1DADFFFCFFADEC5FEE40B0F0F99E" box="[1126,1218,1549,1573]" pageId="14" pageNumber="1073" type="holotype">holotype</typeStatus>
|
|
was inconclusive (
|
|
<bibRefCitation id="6905DEFEFFFCFFADEDB9EE40B796F9FF" author="Taylor PJ & Lavrenchenko LA & Carleton MD" pageId="14" pageNumber="1073" pagination="1 - 66" refId="ref18434" refString="Taylor PJ, Lavrenchenko LA, Carleton MD, et al. Specific limits and emerging diversity pauerns in East African populations of laminate-toothed rats, genus Otomys (Muridae: Murinae: Otomyini): revision of the Otomys typus complex. Zootaxa 2011; 3024: 1 - 66." type="journal article" year="2011">
|
|
Taylor
|
|
<emphasis id="3FE07F1DFFFCFFADEB00EE60B758F9FF" box="[825,874,1580,1604]" italics="true" pageId="14" pageNumber="1073">et al.</emphasis>
|
|
2011
|
|
</bibRefCitation>
|
|
: fig. 5). Further, the type locality was visited by one of the authors (L.A.L.), and the mid-elevation habitat is very unsuitable for both
|
|
<taxonomicName id="CA94D88CFFFCFFADEBD7EE26B072F938" authorityName="Allen" authorityYear="1939" box="[1006,1088,1643,1667]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="typus">
|
|
<emphasis id="3FE07F1DFFFCFFADEBD7EE26B072F938" box="[1006,1088,1643,1667]" italics="true" pageId="14" pageNumber="1073">O. typus</emphasis>
|
|
</taxonomicName>
|
|
and
|
|
<taxonomicName id="CA94D88CFFFCFFADEC4EEE26B0E0F938" box="[1143,1234,1643,1667]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="helleri">
|
|
<emphasis id="3FE07F1DFFFCFFADEC4EEE26B0E0F938" box="[1143,1234,1643,1667]" italics="true" pageId="14" pageNumber="1073">O. helleri</emphasis>
|
|
</taxonomicName>
|
|
. It is also possible that
|
|
<taxonomicName id="CA94D88CFFFCFFADEB00EEC7B744F919" authorityName="Thomas" authorityYear="1902" box="[825,886,1674,1698]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="degeni">
|
|
<emphasis id="3FE07F1DFFFCFFADEB00EEC7B744F919" box="[825,886,1674,1698]" italics="true" pageId="14" pageNumber="1073">degeni</emphasis>
|
|
</taxonomicName>
|
|
is an available name for
|
|
<taxonomicName id="CA94D88CFFFCFFADEC51EEC6B130F919" box="[1128,1282,1674,1698]" class="Mammalia" family="Muridae" genus="Otomys" isUncertain="true" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="cheesmani">
|
|
<emphasis id="3FE07F1DFFFCFFADEC51EEC6B04DF919" box="[1128,1151,1675,1698]" italics="true" pageId="14" pageNumber="1073">O.</emphasis>
|
|
cf.
|
|
<emphasis id="3FE07F1DFFFCFFADECA6EEC7B130F919" box="[1183,1282,1674,1698]" italics="true" pageId="14" pageNumber="1073">cheesmani</emphasis>
|
|
</taxonomicName>
|
|
(see that account).
|
|
</paragraph>
|
|
<paragraph id="0D2BA30FFFFCFFADEB00EE8AB005F8A5" blockId="14.[825,1474,1735,1822]" pageId="14" pageNumber="1073">
|
|
<emphasis id="3FE07F1DFFFCFFADEB00EE8AB0BCF964" box="[825,1166,1735,1759]" italics="true" pageId="14" pageNumber="1073">
|
|
Ecological notes:
|
|
<taxonomicName id="CA94D88CFFFCFFADEBC2EE8AB0BCF964" authorityName="Allen" authorityYear="1939" box="[1019,1166,1735,1759]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="typus">
|
|
Otomys
|
|
<typeStatus id="D22F1DADFFFCFFADEC63EE85B0BCF964" box="[1114,1166,1736,1759]" pageId="14" pageNumber="1073">typus</typeStatus>
|
|
</taxonomicName>
|
|
</emphasis>
|
|
is an Afro-alpine species preferring alpine moorland, similar to e.g.
|
|
<taxonomicName id="CA94D88CFFFCFFADECDAEEABB000F8A5" authority="(Mizerovska et al. 2020)" baseAuthorityName="Mizerovska" baseAuthorityYear="2020" class="Mammalia" family="Muridae" genus="Stenocephalemys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="zimai">
|
|
<emphasis id="3FE07F1DFFFCFFADECDAEEABB1F0F945" box="[1251,1474,1766,1790]" italics="true" pageId="14" pageNumber="1073">Stenocephalemys zimai</emphasis>
|
|
(
|
|
<bibRefCitation id="6905DEFEFFFCFFADEB7DEF48B014F8A5" author="Mizerovska D & Mikula O & Meheretu Y" box="[836,1062,1797,1822]" pageId="14" pageNumber="1073" pagination="120031" refId="ref17234" refString="Mizerovska D, Mikula O, Meheretu Y, et al. Integrative taxonomic revision of the Ethiopian endemic rodent genus Stenocephalemys (Muridae: Murinae: Praomyini) with the description of two new species. Journal of Vertebrate Biology 2020; 69: 120031." type="journal article" year="2020">
|
|
Mizerovská
|
|
<emphasis id="3FE07F1DFFFCFFADEB86EF4BB7DCF8A6" box="[959,1006,1797,1821]" italics="true" pageId="14" pageNumber="1073">et al.</emphasis>
|
|
2020
|
|
</bibRefCitation>
|
|
)
|
|
</taxonomicName>
|
|
.
|
|
</paragraph>
|
|
<paragraph id="0D2BA30FFFFCFFADEB00EF72B75EF80E" blockId="14.[825,1475,1855,1973]" pageId="14" pageNumber="1073">
|
|
<emphasis id="3FE07F1DFFFCFFADEB00EF72B07EF8EC" box="[825,1100,1855,1879]" italics="true" pageId="14" pageNumber="1073">
|
|
Distribution:
|
|
<taxonomicName id="CA94D88CFFFCFFADEBFBEF0DB07EF8EC" authorityName="Allen" authorityYear="1939" box="[962,1100,1856,1879]" class="Mammalia" family="Muridae" genus="Otomys" kingdom="Animalia" order="Rodentia" pageId="14" pageNumber="1073" phylum="Chordata" rank="species" species="typus">
|
|
Otomys
|
|
<typeStatus id="D22F1DADFFFCFFADEC21EF0DB07EF8EC" box="[1048,1100,1856,1879]" pageId="14" pageNumber="1073">typus</typeStatus>
|
|
</taxonomicName>
|
|
</emphasis>
|
|
is restricted to four high-elevation mountain ranges north-west of GRV. Compared to
|
|
<bibRefCitation id="6905DEFEFFFCFFADED72EF12B7B1F82D" author="Taylor PJ & Lavrenchenko LA & Carleton MD" pageId="14" pageNumber="1073" pagination="1 - 66" refId="ref18434" refString="Taylor PJ, Lavrenchenko LA, Carleton MD, et al. Specific limits and emerging diversity pauerns in East African populations of laminate-toothed rats, genus Otomys (Muridae: Murinae: Otomyini): revision of the Otomys typus complex. Zootaxa 2011; 3024: 1 - 66." type="journal article" year="2011">
|
|
Taylor
|
|
<emphasis id="3FE07F1DFFFCFFADEDAAEF2DB1F1F8CC" box="[1427,1475,1887,1911]" italics="true" pageId="14" pageNumber="1073">et al.</emphasis>
|
|
(2011)
|
|
</bibRefCitation>
|
|
, we extended its distribution to Choqa and Aboye Gara Mts..
|
|
</paragraph>
|
|
</subSubSection>
|
|
</treatment>
|
|
</document> |