152 lines
14 KiB
XML
152 lines
14 KiB
XML
<document id="F8133EECA6513726A186AD8116C20202" ID-CLB-Dataset="20676" ID-DOI="10.1099/ijsem.0.003109" ID-GBIF-Dataset="c3dc5f9c-9f76-4923-8268-e788461dedd5" ID-ISSN="1466-5034" ID-Zenodo-Dep="6048642" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.taxonomicNames_approvedBy="felipe" checkinTime="1644596996971" checkinUser="felipe" docAuthor="Li, Lei, Wang, Jie, Zhou, Yong-jun, Lin, Hou-wen & Lu, Yan-hua" docDate="2019" docId="03BD87ECFF9EFFE83517FC930427FEF5" docLanguage="en" docName="IntJSystEvolMicrobiol.69.1.99-104.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 69 (1)" docSource="http://dx.doi.org/10.1099/ijsem.0.003109" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Streptomyces diacarni Li & Wang & Zhou & Lin & Lu 2019, SP. NOV." docType="treatment" docVersion="8" lastPageNumber="103" masterDocId="FF84FF94FF9AFFEC356EFFC70119FF92" masterDocTitle="Streptomyces reniochalinae sp. nov. and Streptomyces diacarni sp. nov., from marine sponges" masterLastPageNumber="104" masterPageNumber="99" pageNumber="103" updateTime="1699310162744" updateUser="ExternalLinkService">
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<mods:titleInfo id="96C013B2835BC4EAD44665935FBCF8C7">
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<mods:title id="3C58F641D25C117A53AB1D0DB93C728B">Streptomyces reniochalinae sp. nov. and Streptomyces diacarni sp. nov., from marine sponges</mods:title>
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<mods:namePart id="6F29B3E1101EA2D09088672257F65D91">Li, Lei</mods:namePart>
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<mods:namePart id="850505E772E58E0CEDDA01B6AFF4E1CB">Wang, Jie</mods:namePart>
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<mods:name id="FB5D7E8ABE7835D6F385CD59CC45D49D" type="personal">
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<mods:roleTerm id="726D0DB467F43B15020C4A6863282ABB">Author</mods:roleTerm>
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<mods:namePart id="AB19A9743E742D4474AA769CEC8F9F0C">Zhou, Yong-jun</mods:namePart>
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<mods:namePart id="BC5D93D551A40DC8456A47647E46D121">Lin, Hou-wen</mods:namePart>
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<mods:namePart id="61905F5B5B3D199676190DDC8AAE65D4">Lu, Yan-hua</mods:namePart>
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<mods:title id="5A3F2D34DFC2BDBBA96761813D68DFF9">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:part id="A791B39C8E057C4739CB8621F5DF2A7C">
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<mods:date id="730446094E5B8A7098D5043641E85527">2019</mods:date>
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<mods:number id="6EC57C4990438DC1DED202017A0C8779">2019-01-01</mods:number>
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<treatment id="03BD87ECFF9EFFE83517FC930427FEF5" ID-DOI="http://doi.org/10.5281/zenodo.6309526" ID-GBIF-Taxon="193365090" ID-Zenodo-Dep="6309526" LSID="urn:lsid:plazi:treatment:03BD87ECFF9EFFE83517FC930427FEF5" httpUri="http://treatment.plazi.org/id/03BD87ECFF9EFFE83517FC930427FEF5" lastPageNumber="103" pageId="4" pageNumber="103">
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<subSubSection id="C30E6571FF9EFFE83517FC9301EDFC04" pageId="4" pageNumber="103" type="nomenclature">
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<paragraph id="8BAB36FAFF9EFFE83517FC9301EDFC04" blockId="4.[121,760,852,1945]" pageId="4" pageNumber="103">
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<heading id="D0E38196FF9EFFE83517FC9301EDFC04" allCaps="true" bold="true" fontSize="12" level="2" pageId="4" pageNumber="103" reason="3">
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<emphasis id="B960EAE8FF9EFFE83517FC9301EDFC04" bold="true" pageId="4" pageNumber="103">
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DESCRIPTION OF
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<taxonomicName id="4C144D79FF9EFFE83400FC9303CFFCE3" authority="Li & Wang & Zhou & Lin & Lu, 2019" authorityName="Li & Wang & Zhou & Lin & Lu" authorityYear="2019" box="[366,726,852,881]" class="Actinobacteridae" family="Streptomycetaceae" genus="Streptomyces" kingdom="Bacteria" order="Actinomycetales" pageId="4" pageNumber="103" phylum="Actinobacteria" rank="species" species="diacarni" status="sp. nov.">
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<emphasis id="B960EAE8FF9EFFE83400FC9303CFFCE3" bold="true" box="[366,726,852,881]" italics="true" pageId="4" pageNumber="103">STREPTOMYCES DIACARNI</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A2535793FF9EFFE83517FCBE01EDFC04" box="[121,244,889,918]" pageId="4" pageNumber="103" rank="species">SP. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C30E6571FF9EFFE83517FC61038CFC4F" pageId="4" pageNumber="103" type="etymology">
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<paragraph id="8BAB36FAFF9EFFE83517FC61038CFC4F" blockId="4.[121,760,852,1945]" pageId="4" pageNumber="103">
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<taxonomicName id="4C144D79FF9EFFE83517FC61007AFC2F" authorityName="Li & Wang & Zhou & Lin & Lu" authorityYear="2019" box="[121,355,933,957]" class="Actinobacteridae" family="Streptomycetaceae" genus="Streptomyces" kingdom="Bacteria" order="Actinomycetales" pageId="4" pageNumber="103" phylum="Actinobacteria" rank="species" species="diacarni">
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<emphasis id="B960EAE8FF9EFFE83517FC61007AFC2F" box="[121,355,933,957]" italics="true" pageId="4" pageNumber="103">Streptomyces diacarni</emphasis>
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</taxonomicName>
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(di.a.car′ ni. N.L. gen. n.
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<taxonomicName id="4C144D79FF9EFFE83711FC6203CEFC2F" authorityName="Li & Wang & Zhou & Lin & Lu" authorityYear="2019" box="[639,727,933,957]" class="Actinobacteridae" family="Streptomycetaceae" genus="Streptomyces" kingdom="Bacteria" order="Actinomycetales" pageId="4" pageNumber="103" phylum="Actinobacteria" rank="species" species="diacarni">
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<emphasis id="B960EAE8FF9EFFE83711FC6203CEFC2F" box="[639,727,933,957]" italics="true" pageId="4" pageNumber="103">diacarni</emphasis>
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</taxonomicName>
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of the marine sponge
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<emphasis id="B960EAE8FF9EFFE8342DFC02039FFC4E" box="[323,646,964,988]" italics="true" pageId="4" pageNumber="103">Diacarnus megaspinorhabdosa</emphasis>
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).
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</paragraph>
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</subSubSection>
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<subSubSection id="C30E6571FF9EFFE83517FC340427FEF5" pageId="4" pageNumber="103" type="description">
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<paragraph id="8BAB36FAFF9EFFE83517FC34030CF80B" blockId="4.[121,760,852,1945]" pageId="4" pageNumber="103">
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Aerobic, Gram-stain-positive, non-motile, non-acid–alcohol-fast actinomycete that forms extensively branched substrate mycelia and white aerial hyphae which differentiated into chains of smooth-surfaced spores. Growths occurs at 20–40
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<superScript id="7C619BB2FF9EFFE835D0FBA901DCFBEB" attach="right" box="[190,197,1134,1145]" fontSize="6" pageId="4" pageNumber="103">Ǫ</superScript>
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C and at pH 6.0–11.0 with 0–15 % NaCl. Growths occurs at 20–40
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<superScript id="7C619BB2FF9EFFE83445FB49002BFB0B" attach="right" box="[299,306,1166,1177]" fontSize="6" pageId="4" pageNumber="103">Ǫ</superScript>
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C and at pH 6.0–11.0 with 0–15 % NaCl. Gelatin, and Tweens 20, 40 and 60 are degraded, but CMC and Tween 80 are not. Degradation of aesculin and starch are weakly positive. Milk coagulation, peptonization and nitrate reduction are positive. Utilizes L- arabinose, D- arabinose, cellobiose, D- fructose, D- galactose, D- glucose, glycerol, lactose, maltose,
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<subScript id="179034BFFF9EFFE8342DFA950040FAF6" attach="right" box="[323,345,1356,1380]" fontSize="7" pageId="4" pageNumber="103">D-</subScript>
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mannitol,
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<subScript id="179034BFFF9EFFE834BBFA9500F3FAF1" attach="right" box="[469,490,1356,1379]" fontSize="7" pageId="4" pageNumber="103">D-</subScript>
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mannose, melibiose,
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<subScript id="179034BFFF9EFFE8378DFA9501FCFA11" attach="right" fontSize="7" pageId="4" pageNumber="103">L-rhamnose</subScript>
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, D- ribose, sodium acetate, sodium pyruvate, sodium citrate, trehalose and D- xylose as sole carbon sources; weakly utilizes inositol and raffinose, but not dulcitol, D- sorbitol, sucrose or D- xylitol. Utilizes L- alanine, L- arginine, L- asparagine, L- glutamine, glycine, L- histidine, L-hydroxyproline, L- lysine, L- proline, L- serine, L- threonine and xanthine as sole nitrogen sources; and weakly utilizes hypoxanthine,
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<subScript id="179034BFFF9EFFE83473F98A0037F9CD" attach="right" box="[285,302,1607,1631]" fontSize="7" pageId="4" pageNumber="103">L-</subScript>
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leucine and
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<subScript id="179034BFFF9EFFE834D5F98A00D4F9CD" attach="right" box="[443,461,1607,1631]" fontSize="7" pageId="4" pageNumber="103">L-</subScript>
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valine, but not adenine,
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<subScript id="179034BFFF9EFFE8378DF98A01D2F9EC" attach="right" fontSize="7" pageId="4" pageNumber="103">L-aspartic</subScript>
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acid, L- cystenine, L- glutamic acid, L- methionine, L-phenylalanine, L- tryptophan or L- tyrosine. The cell wall contains
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<subScript id="179034BFFF9EFFE835B2F96C01E1F92F" attach="right" box="[220,248,1701,1725]" fontSize="7" pageId="4" pageNumber="103">LL-</subScript>
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diaminopimelic acid and whole-cell sugars are glucose, galactose and ribose. Diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylinositol are the predominant polar lipids. The menaquinone system contains MK-9(H
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<subScript id="179034BFFF9EFFE835BBF8EB01C6F8AF" attach="left" box="[213,223,1836,1853]" fontSize="7" pageId="4" pageNumber="103">6</subScript>
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) as a major component, and MK-9(H
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<subScript id="179034BFFF9EFFE83714F8EB039DF8AF" attach="left" box="[634,644,1836,1853]" fontSize="7" pageId="4" pageNumber="103">4</subScript>
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) and MK-9(H
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<subScript id="179034BFFF9EFFE835CDF88C01B4F8CE" attach="left" box="[163,173,1867,1884]" fontSize="7" pageId="4" pageNumber="103">8</subScript>
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) as minorities. The major fatty acids are iso-C
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<subScript id="179034BFFF9EFFE837A7F88C03EBF8CE" attach="left" box="[713,754,1867,1884]" fontSize="7" pageId="4" pageNumber="103">16: 0</subScript>
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, anteiso-C
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<subScript id="179034BFFF9EFFE835B1F8AC001EF8EE" attach="left" box="[223,263,1899,1916]" fontSize="7" pageId="4" pageNumber="103">15: 0</subScript>
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and anteiso-C
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<subScript id="179034BFFF9EFFE834ACF8AC00F3F8EE" attach="left" box="[450,490,1899,1916]" fontSize="7" pageId="4" pageNumber="103">17: 0</subScript>
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. The G+C content is 72.1 mol% of the 7.6 Mb draft genome.
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</paragraph>
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<paragraph id="8BAB36FAFF9EFFE83655FF710427FEF5" blockId="4.[827,1465,176,359]" pageId="4" pageNumber="103">
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<materialsCitation id="3B7C3CA7FF9EFFE83655FF710422FEF5" ID-GBIF-Occurrence="3465773301" accessionNumber="LHW51701, KX347890" country="China" location="China" pageId="4" pageNumber="103" specimenCount="2" typeStatus="holotype">
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The
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<typeStatus id="54AF8858FF9EFFE83605FF700281FF5D" box="[875,920,183,207]" pageId="4" pageNumber="103">type</typeStatus>
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strain, LHW51701
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<superScript id="7C619BB2FF9EFFE8310BFF770568FF53" attach="left" box="[1125,1137,176,193]" fontSize="7" pageId="4" pageNumber="103">T</superScript>
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(=DSM 106126
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<superScript id="7C619BB2FF9EFFE83072FF770431FF53" attach="none" box="[1308,1320,176,193]" fontSize="7" pageId="4" pageNumber="103">T</superScript>
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=CCTCC AA 2018017
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<superScript id="7C619BB2FF9EFFE836FAFF0802B9FF72" attach="none" box="[916,928,207,224]" fontSize="7" pageId="4" pageNumber="103">T</superScript>
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), was isolated from a
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<emphasis id="B960EAE8FF9EFFE831F7FF110272FE99" italics="true" pageId="4" pageNumber="103">Diacarnus megaspinorhabdosa</emphasis>
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marine sponge collected in the South
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<collectingCountry id="F303766AFF9EFFE8307DFF34044DFE99" box="[1299,1364,243,267]" name="China" pageId="4" pageNumber="103">China</collectingCountry>
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Sea. The GenBank accession number for the 16S rRNA gene sequence and the draft genome sequence of the type strain are
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<accessionNumber id="9447AB19FF9EFFE8360CFE8802C9FEF5" box="[866,976,335,359]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KX347890" pageId="4" pageNumber="103">KX347890</accessionNumber>
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and QOIN00000000, respectively
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</materialsCitation>
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.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |