248 lines
41 KiB
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248 lines
41 KiB
XML
<document id="73A8137B87322B6691655334B449A7AB" ID-CLB-Dataset="4411" ID-DOI="10.11646/phytotaxa.508.2.11" ID-GBIF-Dataset="1eaf1a12-f1ac-48c7-aedf-3f77a5691765" ID-ISSN="1179-3163" ID-Zenodo-Dep="5425819" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1630395706954" checkinUser="marcus" docAuthor="Chudaev, Dmitry, Jüttner, Ingrid & Vijver, Bart Van De" docDate="2021" docId="ED418791FFF1AD4ED5F4FE00FC7994BC" docLanguage="en" docName="phytotaxa.508.2.11.pdf" docOrigin="Phytotaxa 508 (2)" docSource="http://dx.doi.org/10.11646/phytotaxa.508.2.11" docStyle="DocumentStyle:96748F8F1B6C902996E134952A3A36B9.7:Phytotaxa.2014-.journal_article" docStyleId="96748F8F1B6C902996E134952A3A36B9" docStyleName="Phytotaxa.2014-.journal_article" docStyleVersion="7" docTitle="Fragilaria irregularis Chudaev, Juttner & Van de Vijver 2021, sp. nov." docType="treatment" docVersion="7" lastPageNumber="223" masterDocId="1178FFE9FFF0AD4CD57CFB14FF889214" masterDocTitle="Fragilaria irregularis sp. nov. a new araphid species (Fragilariaceae, Bacillariophyta) from the River Adegoy, Krasnodar Territory, Russia" masterLastPageNumber="228" masterPageNumber="221" pageNumber="222" updateTime="1699265716219" updateUser="ExternalLinkService" zenodo-license-figures="UNSPECIFIED" zenodo-license-treatments="UNSPECIFIED">
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<mods:title id="00C55D33EAC59C37BFE202BD4DD330A1">Fragilaria irregularis sp. nov. a new araphid species (Fragilariaceae, Bacillariophyta) from the River Adegoy, Krasnodar Territory, Russia</mods:title>
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<mods:roleTerm id="7255D3FB86ED06D1123CDE254B48960A">Author</mods:roleTerm>
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<mods:namePart id="B74DD7612EB5E166437A49F9968BD3E6">Chudaev, Dmitry</mods:namePart>
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<mods:affiliation id="918E64A20B88D4EFE24A9ADED5FCAE09">Faculty of Biology, M. V. Lomonosov Moscow State University, Leninskie Gory 1, building 12, Moscow, 119234, Russia & chudaev @ list. ru; http: // orcid. org / 0000 - 0002 - 8407 - 6832</mods:affiliation>
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<mods:nameIdentifier id="D3D3CEC6067CCDE10C29302EADDEDFEC" type="email">chudaev@list.ru</mods:nameIdentifier>
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<mods:namePart id="575EF2A6B180F721F68904B09D12B75B">Jüttner, Ingrid</mods:namePart>
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<mods:nameIdentifier id="5218678BF5F0E02CD348EA79B4F7CB13" type="ORCID">0000-0003-0841-6206</mods:nameIdentifier>
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<mods:affiliation id="29C6260D706B5F1D0F328E15DC7CCDF3">Department of Natural Sciences, Amgueddfa Cymru-National Museum Wales, Cathays Park, Cardiff, CF 10 3 NP, UK & Ingrid. Juettner @ museumwales. ac. uk; https: // orcid. org / 0000 - 0003 - 0841 - 6206</mods:affiliation>
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<mods:nameIdentifier id="327269B8BD9E2CF9325D2CDA1B1CD061" type="email">uettner@museumwales.ac.uk</mods:nameIdentifier>
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<mods:namePart id="A6C1420E9B9F412E93B4A4E616F7E252">Vijver, Bart Van De</mods:namePart>
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<mods:affiliation id="05BF795FF27E680BAC9A415871606CE1">Meise Botanic Garden, Research Department, Nieuwelaan 38, 1860 Meise, Belgium & University of Antwerp, Department of Biology-ECOBE, Universiteitsplein 1, 2610 Wilrijk, Belgium</mods:affiliation>
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<mods:title id="7A468CE2103D39F3B21DE17DFCB77F31">Phytotaxa</mods:title>
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<mods:date id="9B162842872BD6CF80CF24CD333A8935">2021</mods:date>
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<mods:number id="9D40C983B39EA25920F8CA0B32095094">2021-06-21</mods:number>
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<treatment id="ED418791FFF1AD4ED5F4FE00FC7994BC" ID-DOI="http://doi.org/10.5281/zenodo.5484870" ID-GBIF-Taxon="185433955" ID-Zenodo-Dep="5484870" LSID="urn:lsid:plazi:treatment:ED418791FFF1AD4ED5F4FE00FC7994BC" httpUri="http://treatment.plazi.org/id/ED418791FFF1AD4ED5F4FE00FC7994BC" lastPageId="2" lastPageNumber="223" pageId="1" pageNumber="222">
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<subSubSection id="2DF2650CFFF1AD4DD5F4FE00FB87973A" box="[136,1039,1300,1327]" pageId="1" pageNumber="222" type="nomenclature">
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<paragraph id="65573687FFF1AD4DD5F4FE00FB87973A" blockId="1.[136,1039,1300,1327]" box="[136,1039,1300,1327]" pageId="1" pageNumber="222">
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<heading id="3E1F81EBFFF1AD4DD5F4FE00FB87973A" bold="true" box="[136,1039,1300,1327]" fontSize="11" level="1" pageId="1" pageNumber="222" reason="1">
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<taxonomicName id="A2E84D04FFF1AD4DD5F4FE00FCA9973A" authority="Chudaev, Juttner & Van de Vijver" authorityName="Chudaev, Juttner & Van de Vijver" authorityYear="2021" box="[136,801,1300,1327]" class="Bacillariophyceae" family="Fragilariaceae" genus="Fragilaria" higherTaxonomySource="GBIF" kingdom="Chromista" order="Fragilariales" pageId="1" pageNumber="222" phylum="Bacillariophyta" rank="species" species="irregularis" status="sp. nov.">
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<emphasis id="579CEA95FFF1AD4DD5F4FE00FE0A973B" bold="true" box="[136,386,1300,1327]" italics="true" pageId="1" pageNumber="222">Fragilaria irregularis</emphasis>
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Chudaev, Jüttner & Van de Vijver
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</taxonomicName>
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,
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<emphasis id="579CEA95FFF1AD4DD651FE00FCF6973A" bold="true" box="[813,894,1300,1326]" italics="true" pageId="1" pageNumber="222">sp. nov</emphasis>
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.
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</taxonomicNameLabel>
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(
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<figureCitation id="FDD32A02FFF1AD4DD6EFFE00FB8F973A" box="[915,1031,1300,1326]" captionStart-0="FIGURES 1–48" captionStart-1="FIGURES 49–52" captionStart-2="FIGURES 53–56" captionStartId-0="2.[136,243,1213,1235]" captionStartId-1="3.[136,243,1375,1397]" captionStartId-2="5.[136,243,1175,1197]" captionTargetBox-0="[151,1430,187,1166]" captionTargetBox-1="[151,1435,389,1351]" captionTargetBox-2="[151,1435,190,1150]" captionTargetId-0="figure-17@2.[151,1435,187,1185]" captionTargetId-1="figure-132@3.[151,1435,389,1351]" captionTargetId-2="figure-21@5.[151,1435,190,1150]" captionTargetPageId-0="2" captionTargetPageId-1="3" captionTargetPageId-2="5" captionText-0="FIGURES 1–48. Fragilaria irregularis sp. nov., LM, type material, slide MW-D 501s1, Fig. 7 represents the holotype. Scale bar = 10 µm." captionText-1="FIGURES 49–52. Fragilaria irregularis sp. nov., SEM, type material, sample MW-D 501. 49–50. External view of entire valves. 51–52. Internal view of entire valves. White arrowheads mark rimoportulae. Scale bars = 2 µm." captionText-2="FIGURES 53–56. Fragilaria irregularis sp. nov., SEM, tilted at 45°, type material, sample MW-D 501. 53. Internal view of valve with attached valvocopula. White arrow marks single row of perforations through valvocopula. 54. External view of an entire frustule. 55–56. Details of the apex of the frustule depicted in Fig. 54. 55. White arrow marks mantle plague, black arrowhead—rimoportula. 56. White arrow marks apical pore field, white arrowhead—ligula, black arrowhead—rimoportula. Scale bars = 2 µm (Fig. 53), 5 µm (Fig. 54), 1 µm (Figs 55–56)." figureDoi-0="http://doi.org/10.5281/zenodo.5425821" figureDoi-1="http://doi.org/10.5281/zenodo.5425823" figureDoi-2="http://doi.org/10.5281/zenodo.5425825" httpUri-0="https://zenodo.org/record/5425821/files/figure.png" httpUri-1="https://zenodo.org/record/5425823/files/figure.png" httpUri-2="https://zenodo.org/record/5425825/files/figure.png" pageId="1" pageNumber="222">Figs 1–56</figureCitation>
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)
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="2DF2650CFFF1AD4DD5F4FE48FC6C95CF" pageId="1" pageNumber="222" type="description">
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<paragraph id="65573687FFF1AD4DD5F4FE48FAF49483" blockId="1.[136,1452,1372,2011]" pageId="1" pageNumber="222">
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Description:—LM (
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<figureCitation id="FDD32A02FFF1AD4DD414FE48FE559762" box="[360,477,1372,1398]" captionStart="FIGURES 1–48" captionStartId="2.[136,243,1213,1235]" captionTargetBox="[151,1430,187,1166]" captionTargetId="figure-17@2.[151,1435,187,1185]" captionTargetPageId="2" captionText="FIGURES 1–48. Fragilaria irregularis sp. nov., LM, type material, slide MW-D 501s1, Fig. 7 represents the holotype. Scale bar = 10 µm." figureDoi="http://doi.org/10.5281/zenodo.5425821" httpUri="https://zenodo.org/record/5425821/files/figure.png" pageId="1" pageNumber="222">Figs 1–48</figureCitation>
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): Cells solitary, ribbon-like colonies not observed. Valves linear in larger and mediumsized specimens to linear-elliptic in smaller specimens. Valve margins tapering abruptly forming well developed ‘shoulders’ near the apices. Apices distinctly protracted, subcapitate. Valve margins sometimes slightly irregular, often with different curvature on both sides of the valve, resulting in an asymmetrical valve shape with a margin slightly more arched on one side and a straight margin on the opposite side. Valve dimensions (n=50): length 14–27 µm, width 3.5–5.5 µm. Sternum distinct although very narrow, linear, not widening in the central part of the valve. Central area absent. Striae alternating, parallel throughout most of the valve, becoming radiate close to apices, irregularly spaced with some virgae much wider than striae,
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<quantity id="A2109B62FFF1AD4DD71CFD4CFD3E9466" box="[608,694,1624,1650]" metricMagnitude="-1" metricUnit="m" metricValue="2.667" metricValueMax="3.556" metricValueMin="1.778" pageId="1" pageNumber="222" unit="in" value="10.5" valueMax="14.0" valueMin="7.0">7–14 in</quantity>
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10 µm. Occasionally, striae slightly shortened (
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<figureCitation id="FDD32A02FFF1AD4DD1B3FD4CFF5A9482" captionStart="FIGURES 1–48" captionStartId="2.[136,243,1213,1235]" captionTargetBox="[151,1430,187,1166]" captionTargetId="figure-17@2.[151,1435,187,1185]" captionTargetPageId="2" captionText="FIGURES 1–48. Fragilaria irregularis sp. nov., LM, type material, slide MW-D 501s1, Fig. 7 represents the holotype. Scale bar = 10 µm." figureDoi="http://doi.org/10.5281/zenodo.5425821" httpUri="https://zenodo.org/record/5425821/files/figure.png" pageId="1" pageNumber="222">Figs 1, 4, 9, 13, 14, 42, 47</figureCitation>
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). Valves showing a more regular striation pattern rare (
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<figureCitation id="FDD32A02FFF1AD4DD645FD68FB879482" box="[825,1039,1660,1686]" captionStart="FIGURES 1–48" captionStartId="2.[136,243,1213,1235]" captionTargetBox="[151,1430,187,1166]" captionTargetId="figure-17@2.[151,1435,187,1185]" captionTargetPageId="2" captionText="FIGURES 1–48. Fragilaria irregularis sp. nov., LM, type material, slide MW-D 501s1, Fig. 7 represents the holotype. Scale bar = 10 µm." figureDoi="http://doi.org/10.5281/zenodo.5425821" httpUri="https://zenodo.org/record/5425821/files/figure.png" pageId="1" pageNumber="222">Figs 12, 28, 34, 44</figureCitation>
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). Areolae not discernible in LM.
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</paragraph>
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<paragraph id="65573687FFF1AD4DD5C1FDB4FC6C95CF" blockId="1.[136,1452,1372,2011]" pageId="1" pageNumber="222">
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SEM (
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<figureCitation id="FDD32A02FFF1AD4DD47BFDB4FE0494AF" box="[263,396,1696,1723]" captionStart-0="FIGURES 49–52" captionStart-1="FIGURES 53–56" captionStartId-0="3.[136,243,1375,1397]" captionStartId-1="5.[136,243,1175,1197]" captionTargetBox-0="[151,1435,389,1351]" captionTargetBox-1="[151,1435,190,1150]" captionTargetId-0="figure-132@3.[151,1435,389,1351]" captionTargetId-1="figure-21@5.[151,1435,190,1150]" captionTargetPageId-0="3" captionTargetPageId-1="5" captionText-0="FIGURES 49–52. Fragilaria irregularis sp. nov., SEM, type material, sample MW-D 501. 49–50. External view of entire valves. 51–52. Internal view of entire valves. White arrowheads mark rimoportulae. Scale bars = 2 µm." captionText-1="FIGURES 53–56. Fragilaria irregularis sp. nov., SEM, tilted at 45°, type material, sample MW-D 501. 53. Internal view of valve with attached valvocopula. White arrow marks single row of perforations through valvocopula. 54. External view of an entire frustule. 55–56. Details of the apex of the frustule depicted in Fig. 54. 55. White arrow marks mantle plague, black arrowhead—rimoportula. 56. White arrow marks apical pore field, white arrowhead—ligula, black arrowhead—rimoportula. Scale bars = 2 µm (Fig. 53), 5 µm (Fig. 54), 1 µm (Figs 55–56)." figureDoi-0="http://doi.org/10.5281/zenodo.5425823" figureDoi-1="http://doi.org/10.5281/zenodo.5425825" httpUri-0="https://zenodo.org/record/5425823/files/figure.png" httpUri-1="https://zenodo.org/record/5425825/files/figure.png" pageId="1" pageNumber="222">Figs 49–56</figureCitation>
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): Valve surface almost flat. Spines or spine vestiges not observed (
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<figureCitation id="FDD32A02FFF1AD4DD101FDB4FA8894AF" box="[1149,1280,1696,1723]" captionStart="FIGURES 49–52" captionStartId="3.[136,243,1375,1397]" captionTargetBox="[151,1435,389,1351]" captionTargetId="figure-132@3.[151,1435,389,1351]" captionTargetPageId="3" captionText="FIGURES 49–52. Fragilaria irregularis sp. nov., SEM, type material, sample MW-D 501. 49–50. External view of entire valves. 51–52. Internal view of entire valves. White arrowheads mark rimoportulae. Scale bars = 2 µm." figureDoi="http://doi.org/10.5281/zenodo.5425823" httpUri="https://zenodo.org/record/5425823/files/figure.png" pageId="1" pageNumber="222">Figs 49–50</figureCitation>
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,
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<figureCitation id="FDD32A02FFF1AD4DD077FDB4FADE94AF" box="[1291,1366,1696,1723]" captionStart="FIGURES 53–56" captionStartId="5.[136,243,1175,1197]" captionTargetBox="[151,1435,190,1150]" captionTargetId="figure-21@5.[151,1435,190,1150]" captionTargetPageId="5" captionText="FIGURES 53–56. Fragilaria irregularis sp. nov., SEM, tilted at 45°, type material, sample MW-D 501. 53. Internal view of valve with attached valvocopula. White arrow marks single row of perforations through valvocopula. 54. External view of an entire frustule. 55–56. Details of the apex of the frustule depicted in Fig. 54. 55. White arrow marks mantle plague, black arrowhead—rimoportula. 56. White arrow marks apical pore field, white arrowhead—ligula, black arrowhead—rimoportula. Scale bars = 2 µm (Fig. 53), 5 µm (Fig. 54), 1 µm (Figs 55–56)." figureDoi="http://doi.org/10.5281/zenodo.5425825" httpUri="https://zenodo.org/record/5425825/files/figure.png" pageId="1" pageNumber="222">54, 55</figureCitation>
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). Large mantle plaques visible at mantle edge (
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<figureCitation id="FDD32A02FFF1AD4DD73AFDD0FD1294CB" box="[582,666,1732,1759]" captionStart="FIGURES 53–56" captionStartId="5.[136,243,1175,1197]" captionTargetBox="[151,1435,190,1150]" captionTargetId="figure-21@5.[151,1435,190,1150]" captionTargetPageId="5" captionText="FIGURES 53–56. Fragilaria irregularis sp. nov., SEM, tilted at 45°, type material, sample MW-D 501. 53. Internal view of valve with attached valvocopula. White arrow marks single row of perforations through valvocopula. 54. External view of an entire frustule. 55–56. Details of the apex of the frustule depicted in Fig. 54. 55. White arrow marks mantle plague, black arrowhead—rimoportula. 56. White arrow marks apical pore field, white arrowhead—ligula, black arrowhead—rimoportula. Scale bars = 2 µm (Fig. 53), 5 µm (Fig. 54), 1 µm (Figs 55–56)." figureDoi="http://doi.org/10.5281/zenodo.5425825" httpUri="https://zenodo.org/record/5425825/files/figure.png" pageId="1" pageNumber="222">Fig. 55</figureCitation>
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, white arrow). Striae uniseriate, composed of small, circular, usually rimmed areolae; 49–63 areolae in 10 µm (
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<figureCitation id="FDD32A02FFF1AD4DD70FFDFCFD709517" box="[627,760,1768,1795]" captionStart="FIGURES 49–52" captionStartId="3.[136,243,1375,1397]" captionTargetBox="[151,1435,389,1351]" captionTargetId="figure-132@3.[151,1435,389,1351]" captionTargetPageId="3" captionText="FIGURES 49–52. Fragilaria irregularis sp. nov., SEM, type material, sample MW-D 501. 49–50. External view of entire valves. 51–52. Internal view of entire valves. White arrowheads mark rimoportulae. Scale bars = 2 µm." figureDoi="http://doi.org/10.5281/zenodo.5425823" httpUri="https://zenodo.org/record/5425823/files/figure.png" pageId="1" pageNumber="222">Figs 49–50</figureCitation>
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,
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<figureCitation id="FDD32A02FFF1AD4DD67AFDFCFCD89517" box="[774,848,1768,1795]" captionStart="FIGURES 53–56" captionStartId="5.[136,243,1175,1197]" captionTargetBox="[151,1435,190,1150]" captionTargetId="figure-21@5.[151,1435,190,1150]" captionTargetPageId="5" captionText="FIGURES 53–56. Fragilaria irregularis sp. nov., SEM, tilted at 45°, type material, sample MW-D 501. 53. Internal view of valve with attached valvocopula. White arrow marks single row of perforations through valvocopula. 54. External view of an entire frustule. 55–56. Details of the apex of the frustule depicted in Fig. 54. 55. White arrow marks mantle plague, black arrowhead—rimoportula. 56. White arrow marks apical pore field, white arrowhead—ligula, black arrowhead—rimoportula. Scale bars = 2 µm (Fig. 53), 5 µm (Fig. 54), 1 µm (Figs 55–56)." figureDoi="http://doi.org/10.5281/zenodo.5425825" httpUri="https://zenodo.org/record/5425825/files/figure.png" pageId="1" pageNumber="222">54–56</figureCitation>
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). One transapically elongated rimoportula present at one apex, replacing part of the last stria (
|
||
<figureCitation id="FDD32A02FFF1AD4DD72EFC18FD5C9533" box="[594,724,1804,1831]" captionStart="FIGURES 49–52" captionStartId="3.[136,243,1375,1397]" captionTargetBox="[151,1435,389,1351]" captionTargetId="figure-132@3.[151,1435,389,1351]" captionTargetPageId="3" captionText="FIGURES 49–52. Fragilaria irregularis sp. nov., SEM, type material, sample MW-D 501. 49–50. External view of entire valves. 51–52. Internal view of entire valves. White arrowheads mark rimoportulae. Scale bars = 2 µm." figureDoi="http://doi.org/10.5281/zenodo.5425823" httpUri="https://zenodo.org/record/5425823/files/figure.png" pageId="1" pageNumber="222">Figs 49–52</figureCitation>
|
||
, white arrowheads, 55–56, black arrowheads). Apical pore fields composed of several rows of very small poroids (
|
||
<figureCitation id="FDD32A02FFF1AD4DD7C7FC24FC9B955F" box="[699,787,1840,1867]" captionStart="FIGURES 53–56" captionStartId="5.[136,243,1175,1197]" captionTargetBox="[151,1435,190,1150]" captionTargetId="figure-21@5.[151,1435,190,1150]" captionTargetPageId="5" captionText="FIGURES 53–56. Fragilaria irregularis sp. nov., SEM, tilted at 45°, type material, sample MW-D 501. 53. Internal view of valve with attached valvocopula. White arrow marks single row of perforations through valvocopula. 54. External view of an entire frustule. 55–56. Details of the apex of the frustule depicted in Fig. 54. 55. White arrow marks mantle plague, black arrowhead—rimoportula. 56. White arrow marks apical pore field, white arrowhead—ligula, black arrowhead—rimoportula. Scale bars = 2 µm (Fig. 53), 5 µm (Fig. 54), 1 µm (Figs 55–56)." figureDoi="http://doi.org/10.5281/zenodo.5425825" httpUri="https://zenodo.org/record/5425825/files/figure.png" pageId="1" pageNumber="222">Figs 56</figureCitation>
|
||
, white arrow). Internally, virgae not or only weakly raised above the areolae, the latter present in very shallow grooves. Rimoportula straight to oblique, forming a transapically elongate, lipped slit (
|
||
<figureCitation id="FDD32A02FFF1AD4DD413FC6CFE679587" box="[367,495,1912,1939]" captionStart="FIGURES 49–52" captionStartId="3.[136,243,1375,1397]" captionTargetBox="[151,1435,389,1351]" captionTargetId="figure-132@3.[151,1435,389,1351]" captionTargetPageId="3" captionText="FIGURES 49–52. Fragilaria irregularis sp. nov., SEM, type material, sample MW-D 501. 49–50. External view of entire valves. 51–52. Internal view of entire valves. White arrowheads mark rimoportulae. Scale bars = 2 µm." figureDoi="http://doi.org/10.5281/zenodo.5425823" httpUri="https://zenodo.org/record/5425823/files/figure.png" pageId="1" pageNumber="222">Figs 51–52</figureCitation>
|
||
, white arrowheads). Cingulum composed of at least two open copulae bearing one row of circular perforations (
|
||
<figureCitation id="FDD32A02FFF1AD4DD4E0FC88FE6795A3" box="[412,495,1948,1975]" captionStart="FIGURES 53–56" captionStartId="5.[136,243,1175,1197]" captionTargetBox="[151,1435,190,1150]" captionTargetId="figure-21@5.[151,1435,190,1150]" captionTargetPageId="5" captionText="FIGURES 53–56. Fragilaria irregularis sp. nov., SEM, tilted at 45°, type material, sample MW-D 501. 53. Internal view of valve with attached valvocopula. White arrow marks single row of perforations through valvocopula. 54. External view of an entire frustule. 55–56. Details of the apex of the frustule depicted in Fig. 54. 55. White arrow marks mantle plague, black arrowhead—rimoportula. 56. White arrow marks apical pore field, white arrowhead—ligula, black arrowhead—rimoportula. Scale bars = 2 µm (Fig. 53), 5 µm (Fig. 54), 1 µm (Figs 55–56)." figureDoi="http://doi.org/10.5281/zenodo.5425825" httpUri="https://zenodo.org/record/5425825/files/figure.png" pageId="1" pageNumber="222">Fig. 53</figureCitation>
|
||
, white arrow) at the junction of pars interior and pars exterior. Most abvalvar copula ligulate (
|
||
<figureCitation id="FDD32A02FFF1AD4DD597FCD4FEB695CF" box="[235,318,1984,2011]" captionStart="FIGURES 53–56" captionStartId="5.[136,243,1175,1197]" captionTargetBox="[151,1435,190,1150]" captionTargetId="figure-21@5.[151,1435,190,1150]" captionTargetPageId="5" captionText="FIGURES 53–56. Fragilaria irregularis sp. nov., SEM, tilted at 45°, type material, sample MW-D 501. 53. Internal view of valve with attached valvocopula. White arrow marks single row of perforations through valvocopula. 54. External view of an entire frustule. 55–56. Details of the apex of the frustule depicted in Fig. 54. 55. White arrow marks mantle plague, black arrowhead—rimoportula. 56. White arrow marks apical pore field, white arrowhead—ligula, black arrowhead—rimoportula. Scale bars = 2 µm (Fig. 53), 5 µm (Fig. 54), 1 µm (Figs 55–56)." figureDoi="http://doi.org/10.5281/zenodo.5425825" httpUri="https://zenodo.org/record/5425825/files/figure.png" pageId="1" pageNumber="222">Fig. 56</figureCitation>
|
||
, white arrowhead), valvocopula lacking ligula (
|
||
<figureCitation id="FDD32A02FFF1AD4DD628FCD4FC5095CF" box="[852,984,1984,2011]" captionStart="FIGURES 53–56" captionStartId="5.[136,243,1175,1197]" captionTargetBox="[151,1435,190,1150]" captionTargetId="figure-21@5.[151,1435,190,1150]" captionTargetPageId="5" captionText="FIGURES 53–56. Fragilaria irregularis sp. nov., SEM, tilted at 45°, type material, sample MW-D 501. 53. Internal view of valve with attached valvocopula. White arrow marks single row of perforations through valvocopula. 54. External view of an entire frustule. 55–56. Details of the apex of the frustule depicted in Fig. 54. 55. White arrow marks mantle plague, black arrowhead—rimoportula. 56. White arrow marks apical pore field, white arrowhead—ligula, black arrowhead—rimoportula. Scale bars = 2 µm (Fig. 53), 5 µm (Fig. 54), 1 µm (Figs 55–56)." figureDoi="http://doi.org/10.5281/zenodo.5425825" httpUri="https://zenodo.org/record/5425825/files/figure.png" pageId="1" pageNumber="222">Figs 53–56</figureCitation>
|
||
).
|
||
</paragraph>
|
||
</subSubSection>
|
||
<caption id="3197660FFFF2AD4ED5F4FFA9FF2796E2" ID-DOI="http://doi.org/10.5281/zenodo.5425821" ID-Zenodo-Dep="5425821" httpUri="https://zenodo.org/record/5425821/files/figure.png" pageId="2" pageNumber="223" startId="2.[136,243,1213,1235]" targetBox="[151,1430,187,1166]" targetPageId="2">
|
||
<paragraph id="65573687FFF2AD4ED5F4FFA9FF2796E2" blockId="2.[136,1451,1213,1270]" pageId="2" pageNumber="223">
|
||
<emphasis id="579CEA95FFF2AD4ED5F4FFA9FEB896C6" bold="true" box="[136,304,1213,1235]" pageId="2" pageNumber="223">FIGURES 1–48.</emphasis>
|
||
<taxonomicName id="A2E84D04FFF2AD4ED44BFFA9FD8396C6" authority="Chudaev & Jüttner & Vijver, 2021" authorityName="Chudaev & Jüttner & Vijver" authorityYear="2021" box="[311,523,1213,1234]" class="Bacillariophyceae" family="Fragilariaceae" genus="Fragilaria" higherTaxonomySource="GBIF" kingdom="Chromista" order="Fragilariales" pageId="2" pageNumber="223" phylum="Bacillariophyta" rank="species" species="irregularis" status="sp. nov.">
|
||
<emphasis id="579CEA95FFF2AD4ED44BFFA9FD8396C6" box="[311,523,1213,1234]" italics="true" pageId="2" pageNumber="223">Fragilaria irregularis</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="4CAF57EEFFF2AD4ED76EFFA9FDD496C6" box="[530,604,1213,1234]" pageId="2" pageNumber="223" rank="species">
|
||
<emphasis id="579CEA95FFF2AD4ED76EFFA9FDD096C6" box="[530,600,1213,1234]" italics="true" pageId="2" pageNumber="223">sp. nov</emphasis>
|
||
.
|
||
</taxonomicNameLabel>
|
||
, LM, type material, slide MW-D 501s1, Fig. 7 represents the holotype. Scale bar = 10 µm.
|
||
</paragraph>
|
||
</caption>
|
||
<subSubSection id="2DF2650CFFF2AD4ED5C1FE31FE339793" pageId="2" pageNumber="223" type="materials_examined">
|
||
<paragraph id="65573687FFF2AD4ED5C1FE31FE339793" blockId="2.[136,1452,1317,1704]" pageId="2" pageNumber="223">
|
||
<emphasis id="579CEA95FFF2AD4ED5C1FE31FF70972B" bold="true" box="[189,248,1317,1343]" pageId="2" pageNumber="223">Type</emphasis>
|
||
:—
|
||
<materialsCitation id="D5803CDAFFF2AD4ED460FE31FE599770" ID-GBIF-Occurrence="3341286302" collectionCode="A" country="Russia" county="Territory" elevation="176" latitude="44.7258" location="Afonka Khutor" longLatPrecision="1" longitude="37.93992" municipality="Adegoy River" pageId="2" pageNumber="223" specimenCount="1" stateProvince="Krasnodar">
|
||
<collectingCountry id="1DFF7617FFF2AD4ED460FE31FE08972B" box="[284,384,1317,1343]" name="Russia" pageId="2" pageNumber="223">RUSSIA</collectingCountry>
|
||
.
|
||
<collectingRegion id="A72CF865FFF2AD4ED4EFFE31FD80972B" box="[403,520,1317,1343]" country="Russia" name="Krasnodar" pageId="2" pageNumber="223">Krasnodar</collectingRegion>
|
||
<collectingCounty id="8C364E0BFFF2AD4ED76FFE31FDF3972B" box="[531,635,1317,1343]" pageId="2" pageNumber="223">Territory</collectingCounty>
|
||
:
|
||
<collectingMunicipality id="8533ACFDFFF2AD4ED7F5FE31FCA5972B" box="[649,813,1317,1343]" pageId="2" pageNumber="223">Adegoy River</collectingMunicipality>
|
||
, vicinity of
|
||
<location id="6037605CFFF2AD4ED6BEFE31FBFB972B" LSID="urn:lsid:plazi:treatment:ED418791FFF1AD4ED5F4FE00FC7994BC:6037605CFFF2AD4ED6BEFE31FBFB972B" box="[962,1139,1317,1343]" country="Russia" county="Territory" latitude="44.7258" longLatPrecision="1" longitude="37.93992" municipality="Adegoy River" name="Afonka Khutor" pageId="2" pageNumber="223" stateProvince="Krasnodar">Afonka Khutor</location>
|
||
, on mosses,
|
||
<geoCoordinate id="00DC5040FFF2AD4ED06CFE31FA2F9754" box="[1296,1447,1317,1344]" degrees="44.72580" direction="north" orientation="latitude" pageId="2" pageNumber="223" precision="1" value="44.7258">44.72580° N</geoCoordinate>
|
||
,
|
||
<geoCoordinate id="00DC5040FFF2AD4ED5F4FE5DFE9D9770" box="[136,277,1353,1380]" degrees="37.93992" direction="east" orientation="longitude" pageId="2" pageNumber="223" precision="1" value="37.93992">37.93992° E</geoCoordinate>
|
||
,
|
||
<elevation id="EEC5D1B4FFF2AD4ED458FE5DFE1E9777" box="[292,406,1353,1380]" metricMagnitude="2" metricUnit="m" metricValue="1.76" pageId="2" pageNumber="223" unit="m" value="176.0">
|
||
<quantity id="A2109B62FFF2AD4ED458FE5DFEE49770" box="[292,364,1353,1380]" metricMagnitude="2" metricUnit="m" metricValue="1.76" pageId="2" pageNumber="223" unit="m" value="176.0">176 m</quantity>
|
||
asl
|
||
</elevation>
|
||
,
|
||
<emphasis id="579CEA95FFF2AD4ED4DEFE5EFE599770" box="[418,465,1354,1380]" italics="true" pageId="2" pageNumber="223">
|
||
D.
|
||
<collectionCode id="03F9AE42FFF2AD4ED4C1FE5EFE599770" box="[445,465,1354,1380]" country="USA" lsid="urn:lsid:biocol.org:col:15406" name="Harvard University - Arnold Arboretum" pageId="2" pageNumber="223" type="Herbarium">A</collectionCode>
|
||
</emphasis>
|
||
</materialsCitation>
|
||
<emphasis id="579CEA95FFF2AD4ED4ADFE5EFE5D9770" box="[465,469,1354,1380]" italics="true" pageId="2" pageNumber="223">.</emphasis>
|
||
<materialsCitation id="D5803CDAFFF2AD4ED4A1FE5DFE3F9793" ID-GBIF-Occurrence="3341286301" collectingDate="2016-05-27" collectionCode="LE" country="Russia" location="Chudaev" pageId="2" pageNumber="223" specimenCode="A0000300, A0000303" specimenCount="1" stateProvince="Krasnodar" typeStatus="holotype">
|
||
<emphasis id="579CEA95FFF2AD4ED4A1FE5DFDC99777" box="[477,577,1353,1379]" italics="true" pageId="2" pageNumber="223">
|
||
<location id="6037605CFFF2AD4ED4A1FE5DFDC99777" LSID="urn:lsid:plazi:treatment:ED418791FFF1AD4ED5F4FE00FC7994BC:6037605CFFF2AD4ED4A1FE5DFDC99777" box="[477,577,1353,1379]" country="Russia" name="Chudaev" pageId="2" pageNumber="223" stateProvince="Krasnodar">Chudaev</location>
|
||
</emphasis>
|
||
,
|
||
<emphasis id="579CEA95FFF2AD4ED72CFE5DFD739777" box="[592,763,1353,1379]" italics="true" pageId="2" pageNumber="223">
|
||
<date id="11561047FFF2AD4ED72CFE5DFD739777" box="[592,763,1353,1379]" pageId="2" pageNumber="223" value="2016-05-27">
|
||
<collectingDate id="0112E9AFFFF2AD4ED72CFE5DFD739777" box="[592,763,1353,1379]" pageId="2" pageNumber="223" value="2016-05-27">27th May 2016</collectingDate>
|
||
</date>
|
||
</emphasis>
|
||
(
|
||
<typeStatus id="BA538825FFF2AD4ED670FE5DFCF19777" box="[780,889,1353,1379]" pageId="2" pageNumber="223" type="holotype">Holotype</typeStatus>
|
||
: MW-D! slide 501s1 =
|
||
<figureCitation id="FDD32A02FFF2AD4ED1F8FE5DFB409770" box="[1156,1224,1353,1380]" captionStart="FIGURES 1–48" captionStartId="2.[136,243,1213,1235]" captionTargetBox="[151,1430,187,1166]" captionTargetId="figure-17@2.[151,1435,187,1185]" captionTargetPageId="2" captionText="FIGURES 1–48. Fragilaria irregularis sp. nov., LM, type material, slide MW-D 501s1, Fig. 7 represents the holotype. Scale bar = 10 µm." figureDoi="http://doi.org/10.5281/zenodo.5425821" httpUri="https://zenodo.org/record/5425821/files/figure.png" pageId="2" pageNumber="223">Fig. 7</figureCitation>
|
||
; isotypes: slides
|
||
<collectionCode id="03F9AE42FFF2AD4ED0F5FE5EFA239770" box="[1417,1451,1354,1380]" country="Brazil" name="Servico de Microbiologia e Imunologia" pageId="2" pageNumber="223">LE</collectionCode>
|
||
<specimenCode id="354E9EFCFFF2AD4ED5F4FE79FE899793" box="[136,257,1389,1415]" collectionCode="A" country="USA" lsid="urn:lsid:biocol.org:col:15406" name="Harvard University - Arnold Arboretum" pageId="2" pageNumber="223" type="Herbarium">A0000300</specimenCode>
|
||
,
|
||
<collectionCode id="03F9AE42FFF2AD4ED470FE7AFEA6979C" box="[268,302,1390,1416]" country="Brazil" name="Servico de Microbiologia e Imunologia" pageId="2" pageNumber="223">LE</collectionCode>
|
||
<specimenCode id="354E9EFCFFF2AD4ED448FE79FE279793" box="[308,431,1389,1415]" collectionCode="A" country="USA" lsid="urn:lsid:biocol.org:col:15406" name="Harvard University - Arnold Arboretum" pageId="2" pageNumber="223" type="Herbarium">A0000303</specimenCode>
|
||
)
|
||
</materialsCitation>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="2DF2650CFFF2AD4ED5C1FE85FC7B97B8" box="[189,1011,1425,1452]" pageId="2" pageNumber="223" type="etymology">
|
||
<paragraph id="65573687FFF2AD4ED5C1FE85FC7B97B8" blockId="2.[136,1452,1317,1704]" box="[189,1011,1425,1452]" pageId="2" pageNumber="223">
|
||
<emphasis id="579CEA95FFF2AD4ED5C1FE85FEB697BF" bold="true" box="[189,318,1425,1451]" pageId="2" pageNumber="223">Etymology</emphasis>
|
||
:—The specific epithet refers to the irregular striation pattern.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="2DF2650CFFF2AD4ED5C1FEA1FC7994BC" pageId="2" pageNumber="223" type="biology_ecology">
|
||
<paragraph id="65573687FFF2AD4ED5C1FEA1FC7994BC" blockId="2.[136,1452,1317,1704]" pageId="2" pageNumber="223">
|
||
<emphasis id="579CEA95FFF2AD4ED5C1FEA1FE6E97DB" bold="true" box="[189,486,1461,1487]" pageId="2" pageNumber="223">Ecology and distribution</emphasis>
|
||
:—The species is so far only known from its
|
||
<typeStatus id="BA538825FFF2AD4ED69FFEA2FB9B97C4" box="[995,1043,1462,1488]" pageId="2" pageNumber="223">type</typeStatus>
|
||
locality, the Adegoy River, where it was present at a relative abundance of 6.5%. The associated diatom flora in the sample was composed of several, at present unidentified, species in
|
||
<taxonomicName id="A2E84D04FFF2AD4ED495FEE9FCE1940C" authority="Kutzing (1844: 75" authorityName="Kutzing" authorityYear="1844" box="[489,873,1533,1560]" class="Bacillariophyceae" family="Achnanthidiaceae" genus="Achnanthidium" higherTaxonomySource="GBIF" kingdom="Chromista" order="Achnanthales" pageId="2" pageNumber="223" phylum="Bacillariophyta" rank="genus">
|
||
<emphasis id="579CEA95FFF2AD4ED495FEE9FD1C9403" box="[489,660,1533,1559]" italics="true" pageId="2" pageNumber="223">Achnanthidium</emphasis>
|
||
<bibRefCitation id="01794B76FFF2AD4ED7E7FEE9FCE1940C" author="Kutzing, F. T." box="[667,873,1533,1560]" pageId="2" pageNumber="223" refId="ref4963" refString="Kutzing, F. T. (1844) Die Kieselschaligen Bacillarien oder Diatomeen. W. Kohne, Nordhausen, 152 pp." type="book" year="1844">Kützing (1844: 75</bibRefCitation>
|
||
</taxonomicName>
|
||
, 40%) and
|
||
<taxonomicName id="A2E84D04FFF2AD4ED694FEEAFAE2940C" authority="Krammer (1997: 156" authorityName="Krammer" authorityYear="1997" box="[1000,1386,1533,1560]" class="Bacillariophyceae" family="Cymbellaceae" genus="Encyonopsis" higherTaxonomySource="GBIF" kingdom="Chromista" order="Cymbellales" pageId="2" pageNumber="223" phylum="Bacillariophyta" rank="genus">
|
||
<emphasis id="579CEA95FFF2AD4ED694FEEAFBFE9403" box="[1000,1142,1534,1559]" italics="true" pageId="2" pageNumber="223">Encyonopsis</emphasis>
|
||
<bibRefCitation id="01794B76FFF2AD4ED100FEEAFAE2940C" author="Krammer, K." box="[1148,1386,1533,1560]" pageId="2" pageNumber="223" pagination="1 - 382" refId="ref4685" refString="Krammer, K. (1997) Die cymbelloiden Diatomeen. Eine Monographie der weltweit bekannten Taxa. Teil 1. Allgemeines und Encyonema Part. Bibliotheca Diatomologica 36: 1 - 382." type="journal article" year="1997">Krammer (1997: 156</bibRefCitation>
|
||
</taxonomicName>
|
||
, 3%),
|
||
<taxonomicName id="A2E84D04FFF2AD4ED5F4FD36FC3C942F" authority="(Kutzing 1834: 580) D. M. Williams (2012: 260" authorityName="D. M. Williams" authorityYear="1834" baseAuthorityName="Kutzing" baseAuthorityPageNumber="580" baseAuthorityYear="1834" box="[136,948,1569,1596]" class="Magnoliopsida" family="Rhizophoraceae" genus="Diatoma" kingdom="Plantae" order="Malpighiales" pageId="2" pageNumber="223" phylum="Tracheophyta" rank="species" species="moniliformis">
|
||
<emphasis id="579CEA95FFF2AD4ED5F4FD36FE0C942F" box="[136,388,1569,1595]" italics="true" pageId="2" pageNumber="223">Diatoma moniliformis</emphasis>
|
||
(
|
||
<bibRefCitation id="01794B76FFF2AD4ED4EBFD35FDFD9428" author="Kutzing, F. T." box="[407,629,1569,1596]" pageId="2" pageNumber="223" pagination="529 - 620" refId="ref4936" refString="Kutzing, F. T. (1834). Synopsis diatomearum oder Versuch einer systematischen Zusammenstellung der Diatomeen. Linnaea 8: 529 - 620." type="journal article" year="1834">Kützing 1834: 580</bibRefCitation>
|
||
) D.M.
|
||
<bibRefCitation id="01794B76FFF2AD4ED7C0FD35FC3C942F" author="Williams, D. M." box="[700,948,1569,1595]" pageId="2" pageNumber="223" pagination="255 - 261" refId="ref6095" refString="Williams, D. M. (2012) Diatoma moniliforme: commentary, relationships and an appropriate name. Nova Hedwigia, Beiheft 14: 255 - 261." type="journal article" year="2012">Williams (2012: 260</bibRefCitation>
|
||
</taxonomicName>
|
||
, 11%),
|
||
<emphasis id="579CEA95FFF2AD4ED16CFD35FA9B942F" box="[1040,1299,1569,1595]" italics="true" pageId="2" pageNumber="223">Gomphonella olivacea</emphasis>
|
||
(
|
||
<bibRefCitation id="01794B76FFF2AD4ED05BFD36FF4C944B" author="Hornemann, J. W." pageId="2" pageNumber="223" pagination="24" refId="ref4355" refString="Hornemann, J. W. (1810) Icones plantarum sponte nascentium in Regnis Daniae Norvegiae, et in Ducatibus Slesvici et Holsatiae ad illustrandum opus de iisdem plantis, Regio jussu exarandum, Florae Danicae nomine inscriptum. Typis E. A. H. Molleri, Hauniae. Vol. 8 (fasc. 22, 23, 24). pls. 1261 - 1440." type="journal article" year="1810">Hornemann 1810</bibRefCitation>
|
||
: fasc. 24, pl. 1429)
|
||
<bibRefCitation id="01794B76FFF2AD4ED4E3FD51FD1C944B" author="Rabenhorst, L." box="[415,660,1605,1632]" pageId="2" pageNumber="223" refId="ref5243" refString="Rabenhorst, L. (1853) Die Susswasser-Diatomaceen (Bacillarien.): fur Freunde der Mikroskopie. Eduard Kummer, Leipzig, 72 pp." type="book" year="1853">Rabenhorst (1853: 61</bibRefCitation>
|
||
, 3%),
|
||
<emphasis id="579CEA95FFF2AD4ED7A0FD51FB8B944B" box="[732,1027,1605,1631]" italics="true" pageId="2" pageNumber="223">Gomphonema tergestinum</emphasis>
|
||
(Grunow in
|
||
<bibRefCitation id="01794B76FFF2AD4ED1EEFD52FAD2944B" author="Van Heurck, H." box="[1170,1370,1605,1632]" pageId="2" pageNumber="223" refId="ref5939" refString="Van Heurck, H. (1880) Synopsis des Diatomees de Belgique Atlas. Ducaju et Cie, Anvers. pls I - XXX." type="book" year="1880">Van Heurck 1880</bibRefCitation>
|
||
: pl. 25, fig. 40) Fricke in A.
|
||
<bibRefCitation id="01794B76FFF2AD4ED414FD7DFD9F9497" author="Schmidt, A." box="[360,535,1641,1667]" pageId="2" pageNumber="223" pagination="233 - 240" refId="ref5409" refString="Schmidt, A. (1902) Atlas der Diatomaceen-kunde. O. R. Reisland, Leipzig. Series V: Heft 59 - 60. pls 233 - 240." type="book chapter" year="1902">Schmidt (1902</bibRefCitation>
|
||
: pl. 234, figs 39–43, 5%),
|
||
<taxonomicName id="A2E84D04FFF2AD4ED634FD7DFB749497" authority="Lange-Bertalot" authorityName="Lange-Bertalot" box="[840,1276,1641,1667]" class="Bacillariophyceae" family="Naviculaceae" genus="Navicula" kingdom="Chromista" order="Naviculales" pageId="2" pageNumber="223" phylum="Ochrophyta" rank="species" species="cryptotenella">
|
||
<emphasis id="579CEA95FFF2AD4ED634FD7DFBC29497" box="[840,1098,1641,1667]" italics="true" pageId="2" pageNumber="223">Navicula cryptotenella</emphasis>
|
||
Lange-Bertalot
|
||
</taxonomicName>
|
||
in
|
||
<bibRefCitation id="01794B76FFF2AD4ED05EFD7EFE2F94B3" author="Krammer, K. & Lange-Bertalot, H." pageId="2" pageNumber="223" pagination="1 - 230" refId="ref4719" refString="Krammer, K. & Lange-Bertalot, H. (1985) Naviculaceae Neue und wenig bekannte Taxa, neue Kombinationen und Synonyme sowie Bemerkungen zu einigen Gattungen. Bibliotheca Diatomologica 9: 1 - 230." type="journal article" year="1985">Krammer & Lange-Bertalot (1985: 62</bibRefCitation>
|
||
, 3%) and
|
||
<taxonomicName id="A2E84D04FFF2AD4ED764FD99FC3994B3" authority="Hantzsch (1860: 40" authorityName="Hantzsch" authorityYear="1860" box="[536,945,1677,1703]" class="Monogenea" family="Capsalidae" genus="Nitzschia" kingdom="Animalia" order="Capsalidea" pageId="2" pageNumber="223" phylum="Platyhelminthes" rank="species" species="media">
|
||
<emphasis id="579CEA95FFF2AD4ED764FD99FD4394B3" box="[536,715,1677,1703]" italics="true" pageId="2" pageNumber="223">Nitzschia media</emphasis>
|
||
<bibRefCitation id="01794B76FFF2AD4ED7AEFD99FC3994B3" author="Hantzsch, C. A." box="[722,945,1677,1703]" pageId="2" pageNumber="223" pagination="1 - 40" refId="ref4095" refString="Hantzsch, C. A. (1860) Neue Bacillarien: Nitzschia vivax var. elongata, Cymatopleura nobilis. Hedwigia 2 (7): 1 - 40." type="journal article" year="1860">Hantzsch (1860: 40</bibRefCitation>
|
||
</taxonomicName>
|
||
, 6%).
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |