232 lines
21 KiB
XML
232 lines
21 KiB
XML
<document ID-DOI="http://dx.doi.org/10.3897/mycokeys.98.102816" ID-Pensoft-Pub="1314-4049-98-167" ID-Pensoft-UUID="A8196420B4CC5D87B89C0AB494A018C9" ModsDocID="1314-4049-98-167" checkinTime="1688114779056" checkinUser="pensoft" docAuthor="Zhang, Zhi-Yuan, Li, Xin, Chen, Wan-Hao, Liang, Jian-Dong & Han, Yan-Feng" docDate="2023" docId="E8A2725A69F952B5A3636D500791FF11" docLanguage="en" docName="MycoKeys 98: 167-220" docOrigin="MycoKeys 98" docPubDate="2023-06-29" docSource="http://dx.doi.org/10.3897/mycokeys.98.102816" docTitle="Idriella chlamydospora Zhi. Y. Zhang, Y. F. Han & Z. Q. Liang 2023, sp. nov." docType="treatment" docVersion="1" id="A8196420B4CC5D87B89C0AB494A018C9" lastPageNumber="167" masterDocId="A8196420B4CC5D87B89C0AB494A018C9" masterDocTitle="Culturable fungi from urban soils in China II, with the description of 18 novel species in Ascomycota (Dothideomycetes, Eurotiomycetes, Leotiomycetes and Sordariomycetes)" masterLastPageNumber="220" masterPageNumber="167" pageNumber="167" updateTime="1688114779056" updateUser="pensoft">
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<mods:title id="571985D06A38602604BC4EB990347C0A">Culturable fungi from urban soils in China II, with the description of 18 novel species in Ascomycota (Dothideomycetes, Eurotiomycetes, Leotiomycetes and Sordariomycetes)</mods:title>
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<mods:namePart id="71AE9B109AED5783BFAF3EA6F65393F6">Zhang, Zhi-Yuan</mods:namePart>
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<mods:affiliation id="E004742B495608B18EC83954AB167858">Institute of Fungus Resources, College of Life Sciences, Guizhou University, Guiyang 550025, China & College of Eco-Environmental Engineering, Guizhou Minzu University, Guiyang 550025, China</mods:affiliation>
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<mods:roleTerm id="443D95FCA7192BD4DAEE232403537B6A">Author</mods:roleTerm>
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<mods:namePart id="FDFADAAC77EAA8615FFA41D91F4A317B">Li, Xin</mods:namePart>
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<mods:nameIdentifier id="7E7B818D546F03EFC34511906EF0D510" type="ORCID">https://orcid.org/0000-0001-7910-1469</mods:nameIdentifier>
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<mods:affiliation id="DCD1E8ADA0A8FA580BEF4947DB2A9780">Institute of Fungus Resources, College of Life Sciences, Guizhou University, Guiyang 550025, China</mods:affiliation>
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<mods:namePart id="C5734E9A405E2FD97148FF653E880E91">Chen, Wan-Hao</mods:namePart>
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<mods:affiliation id="B693D5146A1F5A28E4F3952B18E82A9C">Basic Medical School, Guizhou University of Traditional Chinese Medicine, Guiyang 550025, China</mods:affiliation>
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<mods:namePart id="9A913831FAE83958956B2A722463E568">Liang, Jian-Dong</mods:namePart>
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<mods:nameIdentifier id="50B8914583375DDA77A40E6F0CB85AD8" type="ORCID">https://orcid.org/0000-0002-3939-3900</mods:nameIdentifier>
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<mods:affiliation id="AFF6E270A63B0BAE19989236AA4B5E22">Basic Medical School, Guizhou University of Traditional Chinese Medicine, Guiyang 550025, China</mods:affiliation>
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<mods:namePart id="E118F60BF266292E4351B1DD71E0D6DA">Han, Yan-Feng</mods:namePart>
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<mods:nameIdentifier id="448802772F0E992C9C93B0B74125291A" type="ORCID">https://orcid.org/0000-0002-8646-3975</mods:nameIdentifier>
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<mods:affiliation id="B01A2A45F38E0AB5BBFB0D7514729966">Institute of Fungus Resources, College of Life Sciences, Guizhou University, Guiyang 550025, China</mods:affiliation>
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<mods:nameIdentifier id="C6896641B1B31FC5E5D6732C7262D37E" type="email">swallow1128@126.com</mods:nameIdentifier>
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<mods:title id="A9A197AB3DD231E062547418E65B104C">MycoKeys</mods:title>
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<mods:date id="73102D1FAFEA129F1E32FA8CAF098305">2023</mods:date>
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<mods:number id="1EE5F0B34724C6906C79CD4F35E6C3A5">2023-06-29</mods:number>
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<mods:number id="73103B9738C9ECDE21BAC55F1C8365BB">98</mods:number>
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<mods:start id="B1204406E3A212571AA3507B4DF0BFC1">167</mods:start>
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<mods:end id="4ACF06243259C567FF454B8718BAF01B">220</mods:end>
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<mods:url id="F041D2EEA7F1B010D067BDEF12021950">http://dx.doi.org/10.3897/mycokeys.98.102816</mods:url>
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<mods:classification id="98BBB01FEDF9E44292C828410A47A7D9">journal article</mods:classification>
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<mods:identifier id="F9B93231A4958721F24B6071D9A8FB85" type="DOI">http://dx.doi.org/10.3897/mycokeys.98.102816</mods:identifier>
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<mods:identifier id="40B5A48BDA1DBA0E547EFCFA630E2271" type="Pensoft-Pub">1314-4049-98-167</mods:identifier>
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<mods:identifier id="85BD9973CAF35F7A8FB4DCE17C8971AD" type="Pensoft-UUID">A8196420B4CC5D87B89C0AB494A018C9</mods:identifier>
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</mods:mods>
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<treatment id="E8A2725A69F952B5A3636D500791FF11" LSID="urn:lsid:plazi:treatment:E8A2725A69F952B5A3636D500791FF11" httpUri="http://treatment.plazi.org/id/E8A2725A69F952B5A3636D500791FF11" lastPageNumber="167" pageId="0" pageNumber="167">
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<subSubSection id="C2DD4AF7E49653C49E18870E66ABF327" pageId="0" pageNumber="167" type="nomenclature">
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<paragraph id="E30FEE3440F214B6D025FC43F5A986BC" pageId="0" pageNumber="167">
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<taxonomicName id="A42FB152FE8DD26404DA172EED82A5D3" ID-CoL="62LWG" LSID="E8A2725A-69F9-52B5-A363-6D500791FF11" authority="Zhi. Y. Zhang, Y. F. Han & Z. Q. Liang" authorityName="Zhi. Y. Zhang, Y. F. Han & Z. Q. Liang" authorityYear="2023" class="Sordariomycetes" family="Microdochiaceae" genus="Idriella" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Idriella chlamydospora" order="Xylariales" pageId="0" pageNumber="167" phylum="Ascomycota" rank="species" species="chlamydospora" status="sp. nov.">Idriella chlamydospora Zhi.Y. Zhang, Y.F. Han & Z.Q. Liang</taxonomicName>
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<taxonomicNameLabel id="5F5AD5C502C145B881328E381B1389C5" pageId="0" pageNumber="167">sp. nov.</taxonomicNameLabel>
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</paragraph>
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</subSubSection>
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<subSubSection id="ACC9DBEA923BE7E837C74F665F7B3401" pageId="0" pageNumber="167" type="description">
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<paragraph id="C5C2FF73CDC2183361286CF480AB3879" pageId="0" pageNumber="167">
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<figureCitation id="44D0E8E0322A814287A4DB9A1CBC4CA6" captionStart="Figure 28" captionStartId="F28" captionText="Figure 28. Idriella chlamydospora (from ex-holotype CGMCC 3.20778) a-c upper and reverse views of cultures on PDA, MEA and OA 14 d after inoculation d-g chlamydospores. Scale bars: 10 µm (d-g)." figureDoi="10.3897/mycokeys.98.102816.figure28" httpUri="https://binary.pensoft.net/fig/870736" pageId="0" pageNumber="167">Fig. 28</figureCitation>
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</paragraph>
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</subSubSection>
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<subSubSection id="08850B4C45CA8FB1A11556827538B1AF" pageId="0" pageNumber="167" type="etymology">
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<paragraph id="CE0EFD26337BB23327E49454317124E8" pageId="0" pageNumber="167">Etymology.</paragraph>
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<paragraph id="F081EBEC7B16AABEFA376DEB9C5C0FAE" pageId="0" pageNumber="167">Refers to the species that only produces chlamydospores.</paragraph>
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</subSubSection>
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||
<subSubSection id="13CBE707105D7CB8BBE45A68A58FBBD9" pageId="0" pageNumber="167" type="materials_examined">
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||
<paragraph id="428BBAC8B09E2D799732D160109524E5" pageId="0" pageNumber="167">
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<typeStatus id="80EB4B53F65614CD0DC013863E2F6546">Type</typeStatus>
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.
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</paragraph>
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<paragraph id="B3E3A1B1ECF3218B10318FD35EE10DAA" pageId="0" pageNumber="167">
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<materialsCitation id="88564A12355DD267EED974196C83D149" collectingDate="2019-08-24" collectorName="Z. Y. Zhang" country="China" latitude="23.320557" location="Nanfang Hospital of Southern Medical University" municipality="Guangzhou City" specimenCount="351879" stateProvince="Guangdong Province" typeStatus="holotype">
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<collectingCountry id="565864E0E8B4654078905F1BE3443F5A" name="China">China</collectingCountry>
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:
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<collectingRegion id="F7AD1E183FBECE95BA76D230214182B7" country="China" name="Guangdong">Guangdong Province</collectingRegion>
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,
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<collectingMunicipality id="E8D29C9EA75161DCD9A729ABCFB5BFFF">Guangzhou City</collectingMunicipality>
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,
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<location id="5A6D6BBC3B07B173D7F3DF329D718F3A" LSID="urn:lsid:plazi:treatment:E8A2725A69F952B5A3636D500791FF11:5A6D6BBC3B07B173D7F3DF329D718F3A" country="China" latitude="23.320557" municipality="Guangzhou City" name="Nanfang Hospital of Southern Medical University" stateProvince="Guangdong Province">Nanfang Hospital of Southern Medical University</location>
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<geoCoordinate id="FF993E608E07392D3B137F9DEC6E3277" degrees="23" direction="north" minutes="19" orientation="latitude" precision="15" seconds="14" value="23.320557">23°19'14"N</geoCoordinate>
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, 113°32'93"E, soil,
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<collectingDate id="80F430308B4C807227EF113DD617A8C5" value="2019-08-24">24 Aug 2019</collectingDate>
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,
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<collectorName id="AD66863819A3E47A4B37D252DDF98188">Z.Y. Zhang</collectorName>
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(HMAS
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<specimenCount id="C6CED2238C7AFB2C030E4204E0D3E4FB" type="generic">
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351879
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<typeStatus id="F6BD7C8AD18074D823938BBD67AFAD2C">holotype</typeStatus>
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</specimenCount>
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designated here, ex-type living culture CGMCC 3.20778 = GZUIFR 21.921)
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</materialsCitation>
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.
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</paragraph>
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</subSubSection>
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<subSubSection id="FF0E5809FE2BBFB4AAA1B78ACB15F737" pageId="0" pageNumber="167" type="description">
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<paragraph id="F9FCA7B3253715189283C3DD7EC98F3A" pageId="0" pageNumber="167">Description.</paragraph>
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<paragraph id="45DCD591FAF8C159608D49A593540C29" pageId="0" pageNumber="167">
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<emphasis id="BF71FFACDA717ECB1A92E05BCE41BA92" bold="true" italics="true" pageId="0" pageNumber="167">Culture characteristics</emphasis>
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(14 d at 25 °C):
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<emphasis id="9FD13EACC6ADAED961A4B9DA5D82BFBE" bold="true" italics="true" pageId="0" pageNumber="167">Colony on PDA</emphasis>
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40-41 mm diam., grey (30F1-30E1), flat, felty to pulverulent, nearly round, margin entire; reverse grey (29F1).
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<emphasis id="21A13A8F42F70ECB06858E1DBF83FA80" bold="true" italics="true" pageId="0" pageNumber="167">Colony on MEA</emphasis>
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31-33 mm diam., grey (6F1), compact, plicated, nearly round, margin entire; reverse soot brown (5F5) from centre to margin.
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<emphasis id="B55A65514252909154DDAA9A9AB8D498" bold="true" italics="true" pageId="0" pageNumber="167">Colony on OA</emphasis>
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38 mm diam., grey (30F1) with a white circle, plicated, nearly round, margin entire; reverse greenish-grey (30E2).
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</paragraph>
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<paragraph id="98784FA20450FE14809782EC1229B03B" pageId="0" pageNumber="167">
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<emphasis id="E3BDFE4B5B0C52CE355255248BE6C5B8" bold="true" italics="true" pageId="0" pageNumber="167">Hyphae</emphasis>
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branched, septate, hyaline, smooth, 1.0-3.0
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<normalizedToken id="7D73A7AC86A6A9243DCED5773F232A9B" originalValue="μm">μm</normalizedToken>
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diam.
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<emphasis id="6CFEA8664F98F9F5A6D6DBC801FE2453" bold="true" italics="true" pageId="0" pageNumber="167">Chlamydospores</emphasis>
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arising in axenic culture on PDA, MEA and OA, moniliform, 1-2-septate, brown, 7.5-20.0
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<normalizedToken id="85F13F60D7BACC2A4D933D5345FF5758" originalValue="×">x</normalizedToken>
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6.5-11.0
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<normalizedToken id="C2401A65F63347AD3C7DA1CA95989A18" originalValue="µm">µm</normalizedToken>
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(av. 18.5
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<normalizedToken id="FEB378BFE86EC562EDB87BED51C3484F" originalValue="×">x</normalizedToken>
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8.6
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<normalizedToken id="38E84416F22878713BCC8E3782DB20C6" originalValue="μm">μm</normalizedToken>
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, n = 50).
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<emphasis id="283E5455ABDA642A3D302B69C925E33F" bold="true" italics="true" pageId="0" pageNumber="167">Conidia</emphasis>
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were not observed.
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<emphasis id="1A391FBD8780D56489250E2E7A9C7239" bold="true" italics="true" pageId="0" pageNumber="167">Sexual morph</emphasis>
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unknown.
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</paragraph>
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||
</subSubSection>
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||
<subSubSection id="585A1FFCB64183A05A13A225D7D186A2" pageId="0" pageNumber="167" type="materials_examined">
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||
<paragraph id="BFBD8B89780F25DAC9E7B2B676F82A7C" pageId="0" pageNumber="167">Additional specimens examined.</paragraph>
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<paragraph id="ED605597FCF6DD73BE4B507D98549FE7" pageId="0" pageNumber="167">
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||
<materialsCitation id="FD49BEAB882965A76B375DDF81CBC865" collectingDate="2019-08-24" collectorName="Z. Y. Zhang" country="China" latitude="23.167778" location="South Campus of Sun Yat-sen University" municipality="Guangzhou City" specimenCount="1" stateProvince="Guangdong Province">
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<collectingCountry id="7DF69D1F614A90936E4F5BAC1811B1CE" name="China">China</collectingCountry>
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:
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<collectingRegion id="850F4BD0546F6C22526ACF79E10F296E" country="China" name="Guangdong">Guangdong Province</collectingRegion>
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,
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<collectingMunicipality id="5D297D45BBA5FD98A46E3C58A96C906C">Guangzhou City</collectingMunicipality>
|
||
,
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<location id="1B9FCE8C57F2D630D6C3CBCC8710D526" LSID="urn:lsid:plazi:treatment:E8A2725A69F952B5A3636D500791FF11:1B9FCE8C57F2D630D6C3CBCC8710D526" country="China" latitude="23.167778" municipality="Guangzhou City" name="South Campus of Sun Yat-sen University" stateProvince="Guangdong Province">South Campus of Sun Yat-sen University</location>
|
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<geoCoordinate id="F613D70738CB9E68A8ED60197B4F765D" degrees="23" direction="north" minutes="10" orientation="latitude" precision="15" seconds="04" value="23.167778">23°10'04"N</geoCoordinate>
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, 113°29'95"E, soil,
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<collectingDate id="AB6171496EDAE0AC31FF9ECAE9FCB2DE" value="2019-08-24">24 Aug 2019</collectingDate>
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,
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<collectorName id="0548808480E6744D47AC9A4740671559">Z.Y. Zhang</collectorName>
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, GZUIFR 21.922
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</materialsCitation>
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.
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</paragraph>
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</subSubSection>
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<subSubSection id="70449EA10CA4EABE15F63EF0F806B33B" pageId="0" pageNumber="167" type="notes">
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<paragraph id="F650896F78AA2193515D8CBCCA5AA661" pageId="0" pageNumber="167">Notes.</paragraph>
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<paragraph id="66674D118460746FE175306056577BA9" pageId="0" pageNumber="167">
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<taxonomicName id="CA0146137B1AE053345209AC77BA2B72" authorityName="Zhi. Y. Zhang, Y. F. Han & Z. Q. Liang" authorityYear="2023" class="Leotiomycetes" family="Microdochiaceae" genus="Idriella" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Idriella chlamydospora" order="Hypocreales" pageId="0" pageNumber="167" phylum="Ascomycota" rank="species" species="chlamydospora">
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<emphasis id="DEA0FA1DEF233CEE88BCA9123977B8C1" italics="true" pageId="0" pageNumber="167">Idriella chlamydospora</emphasis>
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</taxonomicName>
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was isolated from soil in China. Phylogenetically, the new isolates CGMCC 3.20778 and GZUIFR 21.922 formed a single clade with a strongly-supported value and were nested in the genus
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<taxonomicName id="373C6EFFD293C1EA5714338ACE0057D2" authorityName="P.E.Nelson & S.Wilhelm" authorityYear="1956" class="Leotiomycetes" family="Microdochiaceae" genus="Idriella" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Idriella" order="Hypocreales" pageId="0" pageNumber="167" phylum="Ascomycota" rank="genus">
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<emphasis id="3F6C746FF413B38B06A9CE00F4C70046" italics="true" pageId="0" pageNumber="167">Idriella</emphasis>
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</taxonomicName>
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(Fig.
|
||
<figureCitation id="E7358452D316EB3F2B3181FDC38BA017" captionStart="Figure 27" captionStartId="F27" captionText="Figure 27. Concatenated phylogeny of the ITS, LSU, TUB and RPB 2 gene regions of species in Microdochiaceae. Thirty-two strains are used. The tree is rooted in Cryptostroma corticale (CBS 218.52 and CBS 217.52). The tree topology of the BI was similar to the ML analysis. Bayesian posterior probability (≥ 0.8) and ML bootstrap values (≥ 80 %) are indicated along branches (PP / ML). Novel species are in blue and bold font, and " T " indicates type derived sequences." figureDoi="10.3897/mycokeys.98.102816.figure27" httpUri="https://binary.pensoft.net/fig/870735" pageId="0" pageNumber="167">27</figureCitation>
|
||
). However, morphologically,
|
||
<taxonomicName id="6C167C53ECF45244048A0B1B7F4BC326" lsidName="I. chlamydospora" pageId="0" pageNumber="167" rank="species" species="chlamydospora">
|
||
<emphasis id="E0541270FEA0C7AEEBB9C93187175B27" italics="true" pageId="0" pageNumber="167">I. chlamydospora</emphasis>
|
||
</taxonomicName>
|
||
differs from other species in the genus
|
||
<taxonomicName id="3AF9FFB06A3FCCD18E58BD524AADAB91" authorityName="P.E.Nelson & S.Wilhelm" authorityYear="1956" class="Leotiomycetes" family="Microdochiaceae" genus="Idriella" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Idriella" order="Hypocreales" pageId="0" pageNumber="167" phylum="Ascomycota" rank="genus">
|
||
<emphasis id="B4D654C3A89B0973C1744BA338C79A60" italics="true" pageId="0" pageNumber="167">Idriella</emphasis>
|
||
</taxonomicName>
|
||
in that it only produces chlamydospores.
|
||
</paragraph>
|
||
<caption id="59C00D138E3302882298A506DBAE3DE4" doi="10.3897/mycokeys.98.102816.figure27" httpUri="https://binary.pensoft.net/fig/870735" pageId="0" pageNumber="167" start="Figure 27" startId="F27">
|
||
<paragraph id="4925C23F923FC24A25A4B299058FA127" pageId="0" pageNumber="167">
|
||
<emphasis id="216A5ACBA6B23E2B596A6395201B28AA" bold="true" pageId="0" pageNumber="167">Figure 27.</emphasis>
|
||
Concatenated phylogeny of the ITS, LSU,
|
||
<emphasis id="309DDA15E45E8C01326395AA8A3AEAFB" italics="true" pageId="0" pageNumber="167">TUB</emphasis>
|
||
and
|
||
<emphasis id="B2392C2CF2E4E2AEECA150730BF4C1DA" italics="true" pageId="0" pageNumber="167">RPB2</emphasis>
|
||
gene regions of species in
|
||
<taxonomicName id="12BF813802D34669BFC7AF8DAC220E72" authorityName="P.E.Nelson & S.Wilhelm" authorityYear="1956" family="Microdochiaceae" kingdom="Fungi" lsidName="" order="Hypocreales" pageId="0" pageNumber="167" rank="family">Microdochiaceae</taxonomicName>
|
||
. Thirty-two strains are used. The tree is rooted in
|
||
<taxonomicName id="E9D767CFC931EECE4AFE1675F1D7A4DD" genus="Cryptostroma" kingdom="Fungi" lsidName="Cryptostroma corticale" pageId="0" pageNumber="167" phylum="Ascomycota" rank="species" species="corticale">
|
||
<emphasis id="8CF329859E0A4E91D25300C9DDD9F953" italics="true" pageId="0" pageNumber="167">Cryptostroma corticale</emphasis>
|
||
</taxonomicName>
|
||
(CBS 218.52 and CBS 217.52). The tree topology of the BI was similar to the ML analysis. Bayesian posterior probability (≥ 0.8) and ML bootstrap values (≥ 80%) are indicated along branches (PP/ML). Novel species are in blue and bold font, and
|
||
<normalizedToken id="E5FDC1E60FDCD7058B82E4A08A8C1A8E" originalValue="“T”">"T"</normalizedToken>
|
||
indicates type derived sequences.
|
||
</paragraph>
|
||
</caption>
|
||
<caption id="DFEF449E45DF1D13682D12D860D4D0E7" doi="10.3897/mycokeys.98.102816.figure28" httpUri="https://binary.pensoft.net/fig/870736" pageId="0" pageNumber="167" start="Figure 28" startId="F28">
|
||
<paragraph id="528CDDB6282A829562085D0B68C91955" pageId="0" pageNumber="167">
|
||
<emphasis id="DA815754E75E91DB416EB701408193D4" bold="true" pageId="0" pageNumber="167">Figure 28.</emphasis>
|
||
<taxonomicName id="8036EA2096B0F4D69AFADCC42A0F51AE" authorityName="Zhi. Y. Zhang, Y. F. Han & Z. Q. Liang" authorityYear="2023" class="Leotiomycetes" family="Microdochiaceae" genus="Idriella" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Idriella chlamydospora" order="Hypocreales" pageId="0" pageNumber="167" phylum="Ascomycota" rank="species" species="chlamydospora">
|
||
<emphasis id="B91A66E5E5BFE886D76879EE490331D2" italics="true" pageId="0" pageNumber="167">Idriella chlamydospora</emphasis>
|
||
</taxonomicName>
|
||
(from ex-holotype CGMCC 3.20778)
|
||
<emphasis id="3BCD9D918CA13B10285F2A691AFFB815" bold="true" pageId="0" pageNumber="167">a-c</emphasis>
|
||
upper and reverse views of cultures on PDA, MEA and OA 14 d after inoculation
|
||
<emphasis id="3CFE25E07AC6B01924D5506B59925DB7" bold="true" pageId="0" pageNumber="167">d-g</emphasis>
|
||
chlamydospores. Scale bars: 10
|
||
<normalizedToken id="103C5570A239861318D0090B06C6E605" originalValue="µm">µm</normalizedToken>
|
||
(
|
||
<emphasis id="B5E12E9418CE8FB0B80143E7DBAB5074" bold="true" pageId="0" pageNumber="167">d-g</emphasis>
|
||
).
|
||
</paragraph>
|
||
</caption>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |