689 lines
75 KiB
XML
689 lines
75 KiB
XML
<document id="148D3A724B33400D72FCEED20A295DDD" ID-DOI="10.5281/zenodo.196021" ID-GBIF-Dataset="9b2d0077-dfbf-475e-8a35-d964c9145526" ID-ISSN="1175-5326" ID-Zenodo-Dep="196021" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1460236957823" checkinUser="plazi" docAuthor="Zhuo, Kan, Cui, Ruqiang, Ye, Weimin, Luo, Mei, Wang, Honghong, Hu, Xuenan & Liao, Jinling" docDate="2010" docId="DA0F163DFFAA6C487DA350F5FC8C920C" docLanguage="en" docName="zt02509p052.pdf" docOrigin="Zootaxa 2509" docStyle="DocumentStyle:890A69B780ED73D6DB8551B71C8AC79E.4:Zootaxa.2009-2012.journal_article" docStyleId="890A69B780ED73D6DB8551B71C8AC79E" docStyleName="Zootaxa.2009-2012.journal_article" docStyleVersion="4" docTitle="Aphelenchoides fujianensis Zhuo, Cui, Ye, Luo, Wang, Hu & Liao, 2010, n. sp." docType="treatment" docVersion="9" lastPageNumber="50" masterDocId="26366E45FFA86C437D345338FFD0900E" masterDocTitle="Morphological and molecular characterization of Aphelenchoides fujianensis n. sp. (Nematoda: Aphelenchoididae) from Pinus massoniana in China" masterLastPageNumber="52" masterPageNumber="39" pageNumber="41" updateTime="1698239805611" updateUser="plazi">
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<mods:title id="AE1C8D5AA597D930C2C869B3F6FA6AFC">Morphological and molecular characterization of Aphelenchoides fujianensis n. sp. (Nematoda: Aphelenchoididae) from Pinus massoniana in China</mods:title>
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<mods:name id="7ACC45D6E88D242027E0CC071C476911" type="personal">
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<mods:roleTerm id="9A532DAEE54FFA73F4C2D5DD61A5DE6E">Author</mods:roleTerm>
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<mods:namePart id="05AA87D93632409636D0692D84C6CA8F">Zhuo, Kan</mods:namePart>
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<mods:roleTerm id="E98ECCD5130DE332B14F1CF1DF56374C">Author</mods:roleTerm>
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<mods:namePart id="0193FD3360FCFDEF2E9273B264100726">Cui, Ruqiang</mods:namePart>
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<mods:roleTerm id="1C524E1249BEDBC82E566F56611653E9">Author</mods:roleTerm>
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<mods:namePart id="19D8F2D50221D12E9E3781265688A7BD">Ye, Weimin</mods:namePart>
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<mods:roleTerm id="DB0432F1D772DFBFA0BF2B655D2486E1">Author</mods:roleTerm>
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<mods:namePart id="CE318984D116A6BBBC8DE34868F42E86">Luo, Mei</mods:namePart>
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<mods:name id="BCEFF129F56D75F921E0042C27DC2E00" type="personal">
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<mods:roleTerm id="2C0044AB96EB9D254E8DB583C53883B1">Author</mods:roleTerm>
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<mods:namePart id="67ABC7EECCBF61570441E768B7FE5EE8">Wang, Honghong</mods:namePart>
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<mods:roleTerm id="78EDB778A58025344FD43E91F1093774">Author</mods:roleTerm>
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<mods:namePart id="8F3D164104A13CFD5A1A391461F8AC84">Hu, Xuenan</mods:namePart>
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<mods:namePart id="3964EAB73F034AC5D83185CF25AD5333">Liao, Jinling</mods:namePart>
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<mods:title id="66BF2729FC1E85C3BE2EE1C12E23980D">Zootaxa</mods:title>
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<mods:part id="D8E6C4B2A0BB4718C34C61E375D5F337">
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<mods:date id="42E4C4695EED0D6056D20CAD28D101F7">2010</mods:date>
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<mods:detail id="75DA674C50A3B250E8ED9ABE1B7E03D0" type="volume">
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<mods:number id="39A4A7A7564600EE067F6D668B6FB366">2509</mods:number>
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<mods:classification id="E0C082013F12ADFC2095BC45D875E3D5">journal article</mods:classification>
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<mods:identifier id="C0B6B5E92903314E285C1669F0B88F75" type="DOI">10.5281/zenodo.196021</mods:identifier>
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<mods:identifier id="722F5FCF5D93575D0B5D32A84090B084" type="ISSN">1175-5326</mods:identifier>
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<mods:identifier id="D6AC766199883D4A501A7CA18DB82A30" type="Zenodo-Dep">196021</mods:identifier>
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<treatment id="DA0F163DFFAA6C487DA350F5FC8C920C" ID-DOI="http://doi.org/10.5281/zenodo.5659199" ID-GBIF-Taxon="119388584" ID-Zenodo-Dep="5659199" LSID="urn:lsid:plazi:treatment:DA0F163DFFAA6C487DA350F5FC8C920C" httpUri="http://treatment.plazi.org/id/DA0F163DFFAA6C487DA350F5FC8C920C" lastPageId="11" lastPageNumber="50" pageId="2" pageNumber="41">
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<subSubSection id="1ABCF4A0FFAA6C417DA350F5FED49402" pageId="2" pageNumber="41" type="nomenclature">
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<paragraph id="5219A72BFFAA6C417DA350F5FDFE93E8" blockId="2.[151,558,972,1036]" box="[151,558,972,999]" pageId="2" pageNumber="41">
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<heading id="09511047FFAA6C417DA350F5FDFE93E8" bold="true" box="[151,558,972,999]" fontSize="11" level="1" pageId="2" pageNumber="41" reason="1">
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<emphasis id="60D27B39FFAA6C417DA350F5FDFE93E8" bold="true" box="[151,558,972,999]" pageId="2" pageNumber="41">
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<taxonomicName id="95A6DCA8FFAA6C417DA350F5FE3493E9" box="[151,484,973,999]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="2" pageNumber="41" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
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<emphasis id="60D27B39FFAA6C417DA350F5FE3493E9" bold="true" box="[151,484,973,999]" italics="true" pageId="2" pageNumber="41">Aphelenchoides fujianensis</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="7BE1C642FFAA6C417CDF50F4FDFE93E8" box="[491,558,972,998]" pageId="2" pageNumber="41" rank="species">n. sp.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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<paragraph id="5219A72BFFAA6C417DA350CAFED49402" blockId="2.[151,558,972,1036]" box="[151,260,1010,1036]" pageId="2" pageNumber="41">
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<figureCitation id="CA9DBBAEFFAA6C417DA350CAFED49402" box="[151,260,1010,1036]" captionStart-0="FIGURE 1" captionStart-1="FIGURE 3" captionStartId-0="3.[151,256,1968,1992]" captionStartId-1="5.[151,255,1975,1999]" captionTargetBox-0="[317,1286,259,1954]" captionTargetBox-1="[151,1435,984,1951]" captionTargetId-0="figure@3.[305,1290,251,1961]" captionTargetId-1="figure@5.[151,1436,984,1951]" captionTargetPageId-0="3" captionTargetPageId-1="5" captionText-0="FIGURE 1. Aphelenchoides fujianensis n. sp. A: Entire female; B: Entire male; C: Female anterior region; D: Vulval region; E: Lateral field; F: Female tail; H – J: Female tail tips; G: Male tail; K – N: Male tail tips. (All scale bars are 10 µm)" captionText-1="FIGURE 3. Scanning Electron Microscopy (SEM) observation of Aphelenchoides fujianensis n. sp. A: Female head. B: Female tail. C – D: Male tail." httpUri-0="https://zenodo.org/record/196022/files/figure.png" httpUri-1="https://zenodo.org/record/196023/files/figure.png" pageId="2" pageNumber="41">Figs. 1–3</figureCitation>
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</paragraph>
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</subSubSection>
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<subSubSection id="1ABCF4A0FFAA6C417DA35704FE3C9459" box="[151,492,1084,1111]" pageId="2" pageNumber="41" type="description">
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<paragraph id="5219A72BFFAA6C417DA35704FE3C9459" blockId="2.[151,1437,1084,2007]" box="[151,492,1084,1111]" pageId="2" pageNumber="41">
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<emphasis id="60D27B39FFAA6C417DA35704FE859458" bold="true" box="[151,341,1084,1110]" pageId="2" pageNumber="41">Measurements.</emphasis>
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See Table 2.
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</paragraph>
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</subSubSection>
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<subSubSection id="1ABCF4A0FFAA6C417DF0575AFAFE9539" pageId="2" pageNumber="41" type="materials_examined">
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<paragraph id="5219A72BFFAA6C417DF0575AFAFE9539" blockId="2.[151,1437,1084,2007]" pageId="2" pageNumber="41">
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<emphasis id="60D27B39FFAA6C417DF0575AFD5C9472" bold="true" box="[196,652,1122,1148]" pageId="2" pageNumber="41">Material examined. Type-material:</emphasis>
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<typeStatus id="8D1D1989FFAA6C417FA1575AFCD69472" box="[661,774,1122,1148]" pageId="2" pageNumber="41" type="holotype">Holotype</typeStatus>
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male, 20
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<typeStatus id="8D1D1989FFAA6C417EB5575AFC3A9472" box="[897,1002,1122,1148]" pageId="2" pageNumber="41" type="paratype">paratype</typeStatus>
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males and 20
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<typeStatus id="8D1D1989FFAA6C4179AA575AFAD79472" box="[1182,1287,1122,1148]" pageId="2" pageNumber="41" type="paratype">paratype</typeStatus>
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females are deposited in the
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<collectionCode id="34B73FEEFFAA6C417C6357B0FE7794AC" box="[343,423,1160,1186]" httpUri="http://grbio.org/cool/e3b9-k2i3" name="United States Department of Agriculture" pageId="2" pageNumber="41">USDA</collectionCode>
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Nematode Collection, Beltsville, Maryland; two
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<typeStatus id="8D1D1989FFAA6C417EDD57B0FB9E94AC" box="[1001,1102,1160,1186]" pageId="2" pageNumber="41" type="paratype">paratype</typeStatus>
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females in the University of California Nematode Collection, Riverside, California; two
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<typeStatus id="8D1D1989FFAA6C417EB35795FC2294C9" box="[903,1010,1197,1223]" pageId="2" pageNumber="41" type="paratype">paratype</typeStatus>
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females in the Canadian National Nematode Collection, Ottawa,
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<collectingCountry id="2AB1E7BBFFAA6C417F3B57EAFDB994E2" box="[527,617,1234,1260]" name="Canada" pageId="2" pageNumber="41">Canada</collectingCountry>
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and two
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<typeStatus id="8D1D1989FFAA6C417FEE57EAFC9194E2" box="[730,833,1234,1260]" pageId="2" pageNumber="41" type="paratype">paratype</typeStatus>
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females at
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<collectionCode id="34B73FEEFFAA6C417EFB57EAFBC694E2" box="[975,1046,1234,1260]" httpUri="http://grbio.org/cool/zvf2-zx2b" name="CABI Genetic Resource Collection" pageId="2" pageNumber="41">CABI</collectionCode>
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Bioscience,
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<collectingCountry id="2AB1E7BBFFAA6C41798757EAFB0E94E2" box="[1203,1246,1234,1260]" name="United Kingdom" pageId="2" pageNumber="41">UK</collectingCountry>
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Centre, Surrey,
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<collectingCountry id="2AB1E7BBFFAA6C417DA357C0FF15951C" box="[151,197,1272,1298]" name="United Kingdom" pageId="2" pageNumber="41">UK</collectingCountry>
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. Other voucher specimens and cultures are available at the Plant Nematode Research Laboratory, College of Resources and Environmental Sciences, South
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<collectingCountry id="2AB1E7BBFFAA6C417FEA5625FCF49539" box="[734,804,1309,1335]" name="China" pageId="2" pageNumber="41">China</collectingCountry>
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Agricultural University, Guangzhou,
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<collectingCountry id="2AB1E7BBFFAA6C4179D45625FAFA9539" box="[1248,1322,1309,1335]" name="China" pageId="2" pageNumber="41">China</collectingCountry>
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.
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</paragraph>
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</subSubSection>
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<subSubSection id="1ABCF4A0FFAA6C407DF0567AFAE490D9" lastPageId="3" lastPageNumber="42" pageId="2" pageNumber="41" type="description">
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<paragraph id="5219A72BFFAA6C417DF0567AFD6D96DC" blockId="2.[151,1437,1084,2007]" pageId="2" pageNumber="41">
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<emphasis id="60D27B39FFAA6C417DF0567AFEB39552" bold="true" box="[196,355,1346,1372]" pageId="2" pageNumber="41">Description.</emphasis>
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<emphasis id="60D27B39FFAA6C417C58567AFE629555" box="[364,434,1346,1371]" italics="true" pageId="2" pageNumber="41">Male.</emphasis>
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Body slender, posterior region curved ventrally when heat-relaxed; annules fine. Lateral fields with four incisures in mid-body. Lip region rounded in lateral view, unstriated, slightly offset. Stylet 12.5–14 μm long, with small basal swellings, stylet cone comprising
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<emphasis id="60D27B39FFAA6C41792656B5FBE595A8" box="[1042,1077,1421,1446]" italics="true" pageId="2" pageNumber="41">ca.</emphasis>
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45% of total stylet. Procorpus cylindrical,
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<emphasis id="60D27B39FFAA6C417C1C568AFE9B95C5" box="[296,331,1458,1483]" italics="true" pageId="2" pageNumber="41">ca.</emphasis>
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four stylet lengths. Metacorpus oval, with conspicuous valve situated centrally. Nerve ring posterior to metacorpus. Excretory pore anterior to or level with nerve ring, posterior to metacorpus. Pharyngo-intestinal junction immediately posterior to metacorpus. Pharyngeal glands overlapping intestine dorsally for
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<emphasis id="60D27B39FFAA6C417C05551AFE869635" box="[305,342,1570,1595]" italics="true" pageId="2" pageNumber="41">ca.</emphasis>
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3–4 body diameters. Testis single, cells in single row, anteriorly outstretched. Spicules smoothly curved, rosethorn-shaped, apex small, rounded. Rostrum short, pointed. Gubernaculum absent. Tail conoid, terminus with a star-shaped mucro with two to three pointed processes. Three pairs of subventral caudal papillae observed: one pair located just anterior to cloacal aperture, the second slightly behind middle of tail, and the third subterminal. Bursa absent.
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</paragraph>
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<paragraph id="5219A72BFFAA6C407DF055E5FAE490D9" blockId="2.[151,1437,1084,2007]" lastBlockId="3.[151,1436,152,215]" lastPageId="3" lastPageNumber="42" pageId="2" pageNumber="41">
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<emphasis id="60D27B39FFAA6C417DF055E5FEF596F8" box="[196,293,1757,1782]" italics="true" pageId="2" pageNumber="41">Female.</emphasis>
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About equal number as males. Body slender and ventrally curved when heat-relaxed. Anterior region and cuticle similar to male. Monodelphic, ovary outstretched, occupying 40–60% of body length, anterior end about two third of the distance from head to vulva reaching to pharyngeal glands, oocytes in one or two rows in posterior half of the ovary. Oviduct connecting ovary and spermatheca. Spermatheca oval, filled with sperms. Crustaformeria ovate-oblong, posterior to spermatheca, visible in some individuals. Uterus with thick wall, posterior to crustaformeria. Vagina inclined anteriorly at
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<emphasis id="60D27B39FFAA6C41793754A0FBF797BF" box="[1027,1063,1944,1969]" italics="true" pageId="2" pageNumber="41">ca.</emphasis>
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45° to body axis, both anterior and posterior vulval lips slightly protruding, vulval flap absent. Postvulval uterine sac elongate, 68–110 μm long, extending 32–44% of vulva-anus distance,
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<emphasis id="60D27B39FFAB6C407FD053A0FCD790BF" box="[740,775,152,177]" italics="true" pageId="3" pageNumber="42">ca.</emphasis>
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3–4 vulval body widths or 5–8 anal body widths long, sperms usually present. Tail conoid, terminus with a star-shaped mucro with three pointed processes.
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</paragraph>
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</subSubSection>
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<caption id="06D9F7A3FFAB6C407DA35488FA4C97E5" httpUri="https://zenodo.org/record/196022/files/figure.png" pageId="3" pageNumber="42" targetBox="[317,1286,259,1954]" targetPageId="3">
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<paragraph id="5219A72BFFAB6C407DA35488FA4C97E5" blockId="3.[151,1436,1968,2028]" pageId="3" pageNumber="42">
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<emphasis id="60D27B39FFAB6C407DA35488FECB97C6" bold="true" box="[151,283,1968,1992]" pageId="3" pageNumber="42">FIGURE 1.</emphasis>
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<taxonomicName id="95A6DCA8FFAB6C407C175488FD9A97C9" box="[291,586,1968,1991]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="3" pageNumber="42" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
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<emphasis id="60D27B39FFAB6C407C175488FD9A97C9" box="[291,586,1968,1991]" italics="true" pageId="3" pageNumber="42">Aphelenchoides fujianensis</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="7BE1C642FFAB6C407F665488FD4097C6" box="[594,656,1968,1992]" pageId="3" pageNumber="42" rank="species">
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<emphasis id="60D27B39FFAB6C407F665488FD4097C6" bold="true" box="[594,656,1968,1992]" pageId="3" pageNumber="42">n. sp.</emphasis>
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</taxonomicNameLabel>
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A: Entire female; B: Entire male; C: Female anterior region; D: Vulval region; E: Lateral field; F: Female tail; H–J: Female tail tips; G: Male tail; K–N: Male tail tips. (
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<emphasis id="60D27B39FFAB6C4079BB54EDFA4397E2" box="[1167,1427,2005,2028]" italics="true" pageId="3" pageNumber="42">All scale bars are 10 µm</emphasis>
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)
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</paragraph>
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</caption>
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<subSubSection id="1ABCF4A0FFAC6C477DF253AFFBDC912C" pageId="4" pageNumber="43" type="diagnosis">
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<paragraph id="5219A72BFFAC6C477DF253AFFBDC912C" blockId="4.[151,1437,151,588]" pageId="4" pageNumber="43">
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<emphasis id="60D27B39FFAC6C477DF253AFFDF790BF" bold="true" box="[198,551,151,177]" pageId="4" pageNumber="43">Diagnosis and relationships.</emphasis>
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<taxonomicName id="95A6DCA8FFAC6C477F1B53A0FCA090BF" box="[559,880,152,177]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="4" pageNumber="43" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
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<emphasis id="60D27B39FFAC6C477F1B53A0FCA090BF" box="[559,880,152,177]" italics="true" pageId="4" pageNumber="43">Aphelenchoides fujianensis</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="7BE1C642FFAC6C477E4D53AFFC6C90BF" box="[889,956,151,177]" pageId="4" pageNumber="43" rank="species">
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||
<emphasis id="60D27B39FFAC6C477E4D53AFFC6C90BF" bold="true" box="[889,956,151,177]" pageId="4" pageNumber="43">n. sp.</emphasis>
|
||
</taxonomicNameLabel>
|
||
is characterised by four lateral incisures in the lateral field, elongate postvulval uterine sac (extending
|
||
<emphasis id="60D27B39FFAC6C477EB05385FC7890D8" box="[900,936,189,214]" italics="true" pageId="4" pageNumber="43">ca.</emphasis>
|
||
32–44% of vulva-anus distance), usually filled with sperms, large spicules (24–30 μm), three pairs of caudal papillae, star-shaped mucro and relatively long body length (653–843 μm in the male and 803–941 μm in the female).
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="1ABCF4A0FFAC6C467DF05215FD7992B1" lastPageId="5" lastPageNumber="44" pageId="4" pageNumber="43" type="reference_group">
|
||
<paragraph id="5219A72BFFAC6C477DF05215FA8B9242" blockId="4.[151,1437,151,588]" pageId="4" pageNumber="43">
|
||
<taxonomicName id="95A6DCA8FFAC6C477DF05215FDC59148" box="[196,533,301,326]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="4" pageNumber="43" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFAC6C477DF05215FDC59148" box="[196,533,301,326]" italics="true" pageId="4" pageNumber="43">Aphelenchoides fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="7BE1C642FFAC6C477F2A5215FDB59149" box="[542,613,301,327]" pageId="4" pageNumber="43" rank="species">
|
||
<emphasis id="60D27B39FFAC6C477F2A5215FDB59149" bold="true" box="[542,613,301,327]" pageId="4" pageNumber="43">n. sp.</emphasis>
|
||
</taxonomicNameLabel>
|
||
belongs to the Group 3 category of
|
||
<taxonomicName id="95A6DCA8FFAC6C47791E5215FB3D9148" box="[1066,1261,301,326]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="4" pageNumber="43" phylum="Nematoda" rank="genus">
|
||
<emphasis id="60D27B39FFAC6C47791E5215FB3D9148" box="[1066,1261,301,326]" italics="true" pageId="4" pageNumber="43">Aphelenchoides</emphasis>
|
||
</taxonomicName>
|
||
species
|
||
<emphasis id="60D27B39FFAC6C47786C5215FA4C9148" box="[1368,1436,301,326]" italics="true" pageId="4" pageNumber="43">sensu</emphasis>
|
||
<bibRefCitation id="3637DADAFFAC6C477DA3526AFE849162" author="Shahina" box="[151,340,338,364]" pageId="4" pageNumber="52" refString="Shahina, F. (1996) A diagnostic compendium of the genus Aphelenchoides Fischer, 1894 (Nematoda: Aphelenchida) with some new records of the group from Pakistan. Pakistan Journal of Nematology, 14, 1 - 32." type="journal article" year="1996">Shahina (1996)</bibRefCitation>
|
||
,
|
||
<emphasis id="60D27B39FFAC6C477C55526AFE569165" box="[353,390,338,363]" italics="true" pageId="4" pageNumber="43">i.e.</emphasis>
|
||
, a group of species with tetramucronate spine or star-shaped terminus of the tail. The identification codes of
|
||
<bibRefCitation id="3637DADAFFAC6C477C975240FD40919C" box="[419,656,376,402]" pageId="4" pageNumber="52" refString="OEPP / EPPO. (2004) EPPO standards PM 7 / 39 (1) diagnostic protocols for regulated pests Aphelenchoides besseyi. Bulletin OEPP / EPPO Bulletin, 34, 303 - 308." type="journal article">OEPP/EPPO (2004)</bibRefCitation>
|
||
for
|
||
<taxonomicName id="95A6DCA8FFAC6C477FF45240FC8F919F" box="[704,863,376,401]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="4" pageNumber="43" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFAC6C477FF45240FC8F919F" box="[704,863,376,401]" italics="true" pageId="4" pageNumber="43">A. fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="7BE1C642FFAC6C477E52524FFC78919F" box="[870,936,375,401]" pageId="4" pageNumber="43" rank="species">
|
||
<emphasis id="60D27B39FFAC6C477E52524FFC78919F" bold="true" box="[870,936,375,401]" pageId="4" pageNumber="43">n. sp.</emphasis>
|
||
</taxonomicNameLabel>
|
||
are: A1-B2-C1-D1/3-E1-F1/2. To date, 21 known species in the Group 3 category of
|
||
<taxonomicName id="95A6DCA8FFAC6C477F9F52A5FCBF91B8" box="[683,879,413,438]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="4" pageNumber="43" phylum="Nematoda" rank="genus">
|
||
<emphasis id="60D27B39FFAC6C477F9F52A5FCBF91B8" box="[683,879,413,438]" italics="true" pageId="4" pageNumber="43">Aphelenchoides</emphasis>
|
||
</taxonomicName>
|
||
species
|
||
<emphasis id="60D27B39FFAC6C477EEE52A5FBCF91B8" box="[986,1055,413,438]" italics="true" pageId="4" pageNumber="43">sensu</emphasis>
|
||
<bibRefCitation id="3637DADAFFAC6C47791352A5FB3691B9" author="Shahina" box="[1063,1254,413,439]" pageId="4" pageNumber="52" refString="Shahina, F. (1996) A diagnostic compendium of the genus Aphelenchoides Fischer, 1894 (Nematoda: Aphelenchida) with some new records of the group from Pakistan. Pakistan Journal of Nematology, 14, 1 - 32." type="journal article" year="1996">Shahina (1996)</bibRefCitation>
|
||
are described. Species comparisons in the Group 3 are compiled in Table 3 updated from
|
||
<bibRefCitation id="3637DADAFFAC6C47792752FAFB1891D2" author="Shahina" box="[1043,1224,450,476]" pageId="4" pageNumber="52" refString="Shahina, F. (1996) A diagnostic compendium of the genus Aphelenchoides Fischer, 1894 (Nematoda: Aphelenchida) with some new records of the group from Pakistan. Pakistan Journal of Nematology, 14, 1 - 32." type="journal article" year="1996">Shahina (1996)</bibRefCitation>
|
||
and
|
||
<bibRefCitation id="3637DADAFFAC6C47783752FAFF3C920C" pageId="4" pageNumber="52" refString="OEPP / EPPO. (2004) EPPO standards PM 7 / 39 (1) diagnostic protocols for regulated pests Aphelenchoides besseyi. Bulletin OEPP / EPPO Bulletin, 34, 303 - 308." type="journal article">OEPP/EPPO (2004)</bibRefCitation>
|
||
. The new species, on the basis of four lateral lines, star-shaped tail terminus, and conoid, slightly ventrally curved tail, appears morphologically most similar to
|
||
<taxonomicName id="95A6DCA8FFAC6C477EA25135FBC19228" box="[918,1041,525,550]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="4" pageNumber="43" phylum="Nematoda" rank="species" species="besseyi">
|
||
<emphasis id="60D27B39FFAC6C477EA25135FBC19228" box="[918,1041,525,550]" italics="true" pageId="4" pageNumber="43">A. besseyi</emphasis>
|
||
</taxonomicName>
|
||
,
|
||
<taxonomicName id="95A6DCA8FFAC6C4779165135FF049242" authority="Siddiqi & Franklin, 1967" authorityName="Siddiqi & Franklin" authorityYear="1967" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="4" pageNumber="43" phylum="Nematoda" rank="species" species="goodeyi">
|
||
<emphasis id="60D27B39FFAC6C4779165135FB749228" box="[1058,1188,525,550]" italics="true" pageId="4" pageNumber="43">A. goodeyi</emphasis>
|
||
<bibRefCitation id="3637DADAFFAC6C4779995135FF049242" author="Siddiqi" pageId="4" pageNumber="52" refString="Siddiqi, M. R. & Franklin, M. (1967) Aphelenchoides goodeyi n. sp. (Nematoda: Aphelenchoidea), a mycetophagous nematode from South India. Nematologica, 13, 125 - 130." type="journal article" year="1967">Siddiqi & Franklin, 1967</bibRefCitation>
|
||
</taxonomicName>
|
||
,
|
||
<taxonomicName id="95A6DCA8FFAC6C477DD4510AFD729242" authority="Eroshenko, 1967" authorityName="Eroshenko" authorityYear="1967" box="[224,674,562,588]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="4" pageNumber="43" phylum="Nematoda" rank="species" species="asteromucronatus">
|
||
<emphasis id="60D27B39FFAC6C477DD4510AFE029245" box="[224,466,562,587]" italics="true" pageId="4" pageNumber="43">A. asteromucronatus</emphasis>
|
||
Eroshenko, 1967
|
||
</taxonomicName>
|
||
,
|
||
<taxonomicName id="95A6DCA8FFAC6C477F9A510AFC0B9242" authority="Fortuner, 1970" authorityName="Fortuner" authorityYear="1970" box="[686,987,562,588]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="4" pageNumber="43" phylum="Nematoda" rank="species" species="siddiqii">
|
||
<emphasis id="60D27B39FFAC6C477F9A510AFCF79245" box="[686,807,562,587]" italics="true" pageId="4" pageNumber="43">A. siddiqii</emphasis>
|
||
Fortuner, 1970
|
||
</taxonomicName>
|
||
and
|
||
<taxonomicName id="95A6DCA8FFAC6C477920510AFA879242" authority="Andrassy, 1958" authorityName="Andrassy" authorityYear="1958" box="[1044,1367,562,588]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="4" pageNumber="43" phylum="Nematoda" rank="species" species="silvester">
|
||
<emphasis id="60D27B39FFAC6C477920510AFB479245" box="[1044,1175,562,587]" italics="true" pageId="4" pageNumber="43">A. silvester</emphasis>
|
||
Andrassy, 1958
|
||
</taxonomicName>
|
||
.
|
||
</paragraph>
|
||
<paragraph id="5219A72BFFAC6C477DA3559DFDAC96F3" pageId="4" pageNumber="43">
|
||
<table id="20A6558BFFAC93BC7DA3559DFA4C96F3" box="[151,1436,1701,1789]" gridcols="3" gridrows="3" pageId="4" pageNumber="43">
|
||
<tr id="EC96A569FFAC93BC7DA3559DFA4C96B3" box="[151,1436,1701,1725]" gridrow="0" pageId="4" pageNumber="43">
|
||
<th id="AF47CC15FFAC93BC7DA3559DFD3C96B3" box="[151,748,1701,1725]" gridcol="0" gridrow="0" pageId="4" pageNumber="43">
|
||
<emphasis id="60D27B39FFAC6C477DA3559DFEC996B3" bold="true" box="[151,281,1701,1725]" pageId="4" pageNumber="43">FIGURE 2.</emphasis>
|
||
<taxonomicName id="95A6DCA8FFAC6C477C2B559EFD9296B3" box="[287,578,1702,1725]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="4" pageNumber="43" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFAC6C477C2B559EFD9296B3" box="[287,578,1702,1725]" italics="true" pageId="4" pageNumber="43">Aphelenchoides fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="7BE1C642FFAC6C477F7C559DFD5496B3" box="[584,644,1701,1725]" pageId="4" pageNumber="43" rank="species">
|
||
<emphasis id="60D27B39FFAC6C477F7C559DFD5496B3" bold="true" box="[584,644,1701,1725]" pageId="4" pageNumber="43">n. sp.</emphasis>
|
||
</taxonomicNameLabel>
|
||
A: Entire
|
||
</th>
|
||
<th id="AF47CC15FFAC93BC7FC7559DFB6996B3" box="[755,1209,1701,1725]" gridcol="1" gridrow="0" pageId="4" pageNumber="43">female; B: Entire male; C: Female anterior</th>
|
||
<th id="AF47CC15FFAC93BC79F4559DFA4C96B3" box="[1216,1436,1701,1725]" gridcol="2" gridrow="0" pageId="4" pageNumber="43">region; D: Excretory</th>
|
||
</tr>
|
||
<tr id="EC96A569FFAC93BC7DA355FEFA4C96D3" box="[151,1436,1734,1757]" gridrow="1" pageId="4" pageNumber="43">
|
||
<th id="AF47CC15FFAC93BC7DA355FEFD3C96D3" box="[151,748,1734,1757]" gridcol="0" gridrow="1" pageId="4" pageNumber="43">pore and nerve ring; E: Lateral field; F: Vulval region</th>
|
||
<td id="AF47CC15FFAC93BC7FC755FEFB6996D3" box="[755,1209,1734,1757]" gridcol="1" gridrow="1" pageId="4" pageNumber="43">and postvulval uterine sac; G–H: Female</td>
|
||
<td id="AF47CC15FFAC93BC79F455FEFA4C96D3" box="[1216,1436,1734,1757]" gridcol="2" gridrow="1" pageId="4" pageNumber="43">tail; I–M: Male tail.</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAC93BC7DA355DEFA4C96F3" box="[151,1436,1766,1789]" gridrow="2" pageId="4" pageNumber="43" rowspan-1="1" rowspan-2="1">
|
||
<th id="AF47CC15FFAC93BC7DA355DEFD3C96F3" box="[151,748,1766,1789]" gridcol="0" gridrow="2" pageId="4" pageNumber="43">
|
||
(
|
||
<emphasis id="60D27B39FFAC6C477D9455DEFDA396F3" box="[160,627,1766,1789]" italics="true" pageId="4" pageNumber="43">Scale bars: A, B are 50 µm; C–M are 10µm</emphasis>
|
||
)
|
||
</th>
|
||
</tr>
|
||
</table>
|
||
</paragraph>
|
||
<paragraph id="5219A72BFFAC6C467DF0541EFD7992B1" blockId="4.[151,1436,1829,2005]" lastBlockId="5.[151,1437,152,927]" lastPageId="5" lastPageNumber="44" pageId="4" pageNumber="43">
|
||
<taxonomicName id="95A6DCA8FFAC6C477DF0541EFDD49731" box="[196,516,1830,1855]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="4" pageNumber="43" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFAC6C477DF0541EFDD49731" box="[196,516,1830,1855]" italics="true" pageId="4" pageNumber="43">Aphelenchoides fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="7BE1C642FFAC6C477F3F541DFD9D9731" box="[523,589,1829,1855]" pageId="4" pageNumber="43" rank="species">
|
||
<emphasis id="60D27B39FFAC6C477F3F541DFD9D9731" bold="true" box="[523,589,1829,1855]" pageId="4" pageNumber="43">n. sp.</emphasis>
|
||
</taxonomicNameLabel>
|
||
differs from
|
||
<taxonomicName id="95A6DCA8FFAC6C477FD3541EFC8D9731" box="[743,861,1830,1855]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="4" pageNumber="43" phylum="Nematoda" rank="species" species="besseyi">
|
||
<emphasis id="60D27B39FFAC6C477FD3541EFC8D9731" box="[743,861,1830,1855]" italics="true" pageId="4" pageNumber="43">A. besseyi</emphasis>
|
||
</taxonomicName>
|
||
by the size and shape of the male spicule (24–30 μm
|
||
<emphasis id="60D27B39FFAC6C477DF25473FF37976A" box="[198,231,1867,1892]" italics="true" pageId="4" pageNumber="43">vs.</emphasis>
|
||
18–21 μm; short condylus
|
||
<emphasis id="60D27B39FFAC6C477F005473FD85976A" box="[564,597,1867,1892]" italics="true" pageId="4" pageNumber="43">vs.</emphasis>
|
||
condylus absent), longer stylet (12.5–14 μm
|
||
<emphasis id="60D27B39FFAC6C47794F5473FB4C976A" box="[1147,1180,1867,1892]" italics="true" pageId="4" pageNumber="43">vs.</emphasis>
|
||
10–12.5 μm), longer female tail (46–58 μm
|
||
<emphasis id="60D27B39FFAC6C477C9A5449FE179784" box="[430,455,1905,1930]" italics="true" pageId="4" pageNumber="43">vs</emphasis>
|
||
36–42 μm), longer postvulval uterine sac (5–8 anal body widths
|
||
<emphasis id="60D27B39FFAC6C4779D15449FB2E9784" box="[1253,1278,1905,1930]" italics="true" pageId="4" pageNumber="43">vs</emphasis>
|
||
2.5–3.5 anal body widths, extending for 32–44%
|
||
<emphasis id="60D27B39FFAC6C477F7F54AEFDBA97A1" box="[587,618,1942,1967]" italics="true" pageId="4" pageNumber="43">vs.</emphasis>
|
||
less than 33% of vulva-anus distance). It differs from
|
||
<taxonomicName id="95A6DCA8FFAC6C4779C354AEFAA797A1" box="[1271,1399,1942,1967]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="4" pageNumber="43" phylum="Nematoda" rank="species" species="goodeyi">
|
||
<emphasis id="60D27B39FFAC6C4779C354AEFAA797A1" box="[1271,1399,1942,1967]" italics="true" pageId="4" pageNumber="43">A. goodeyi</emphasis>
|
||
</taxonomicName>
|
||
by the longer female body (803–941 μm
|
||
<emphasis id="60D27B39FFAC6C477F665483FDA297DA" box="[594,626,1979,2004]" italics="true" pageId="4" pageNumber="43">vs.</emphasis>
|
||
460–610 μm), longer stylet (12.5–14 μm
|
||
<emphasis id="60D27B39FFAC6C4779685483FBAC97DA" box="[1116,1148,1979,2004]" italics="true" pageId="4" pageNumber="43">vs.</emphasis>
|
||
11.5–12.5 μm), position of the excretory pore (anterior to or level with nerve ring
|
||
<emphasis id="60D27B39FFAD6C467E0453A0FC8090BF" box="[816,848,152,177]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
posterior to or level with hind edge of nerve ring), longer gonad (anterior end reaching about two-thirds the distance from head to vulva, ending close to the pharyngeal glands
|
||
<emphasis id="60D27B39FFAD6C467C4053DAFE4390F5" box="[372,403,226,251]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
anterior end reaching one third to a half the distance from head to vulva), longer female tail (46–58 μm
|
||
<emphasis id="60D27B39FFAD6C467C795230FEBD912F" box="[333,365,264,289]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
33–42 μm), mucro number (2–3
|
||
<emphasis id="60D27B39FFAD6C467FC35230FCC7912F" box="[759,791,264,289]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
4), larger female b1 ratio [total body length divided by the distance from the anterior end to the base of the median bulb (
|
||
<bibRefCitation id="3637DADAFFAD6C467EA85208FB199144" author="Siddiqi" box="[924,1225,304,330]" pageId="5" pageNumber="52" refString="Siddiqi, M. R. & Franklin, M. (1967) Aphelenchoides goodeyi n. sp. (Nematoda: Aphelenchoidea), a mycetophagous nematode from South India. Nematologica, 13, 125 - 130." type="journal article" year="1967">Siddiqi & Franklin, 1967</bibRefCitation>
|
||
)] (11–13
|
||
<emphasis id="60D27B39FFAD6C46780E5208FA8A9147" box="[1338,1370,304,329]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
8–10 and the presence of males and of sperms in the postvulval uterine sac (both species were cultured on agar with fungi). From
|
||
<taxonomicName id="95A6DCA8FFAD6C467C025243FDFB919A" box="[310,555,379,404]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="5" pageNumber="44" phylum="Nematoda" rank="species" species="asteromucronatus">
|
||
<emphasis id="60D27B39FFAD6C467C025243FDFB919A" box="[310,555,379,404]" italics="true" pageId="5" pageNumber="44">A. asteromucronatus</emphasis>
|
||
</taxonomicName>
|
||
, the new species differs by having a longer female body (803–941 μm
|
||
<emphasis id="60D27B39FFAD6C4678485243FA4C919A" box="[1404,1436,379,404]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
390–530 μm), higher female c ratio (15.1–18.2
|
||
<emphasis id="60D27B39FFAD6C467FE05298FD2591B7" box="[724,757,416,441]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
10.9–14.5), longer stylet (12.5–14 μm
|
||
<emphasis id="60D27B39FFAD6C4679FB5298FB3F91B7" box="[1231,1263,416,441]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
9 μm), longer postvulval uterine sac (3–4 vulval body widths
|
||
<emphasis id="60D27B39FFAD6C467FF952FEFD3D91D1" box="[717,749,454,479]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
1 vulval body width) and the presence of males. From
|
||
<emphasis id="60D27B39FFAD6C4678B752FEFF28920A" italics="true" pageId="5" pageNumber="44">
|
||
<taxonomicName id="95A6DCA8FFAD6C4678B752FEFF23920A" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="5" pageNumber="44" phylum="Nematoda" rank="species" species="siddiqii">A. siddiqii</taxonomicName>
|
||
,
|
||
</emphasis>
|
||
by longer female body (803–941 μm
|
||
<emphasis id="60D27B39FFAD6C467F8A52D3FD0E920A" box="[702,734,491,516]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
370–700 μm), longer stylet (12.5–14 μm
|
||
<emphasis id="60D27B39FFAD6C4679E052D3FB24920A" box="[1236,1268,491,516]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
11–12.5 μm), longer postvulval uterine sac (3–4 vulval body widths
|
||
<emphasis id="60D27B39FFAD6C467E215128FCE49227" box="[789,820,528,553]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
0.5–1 vulval body width), longer female tail (46–58 μm
|
||
<emphasis id="60D27B39FFAD6C467DF3510EFF389241" box="[199,232,566,591]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
26 μm) and longer spicule (24–30 μm
|
||
<emphasis id="60D27B39FFAD6C467FF9510EFD3F9241" box="[717,751,566,591]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
16–17 μm). From
|
||
<emphasis id="60D27B39FFAD6C467EED510EFBB89241" box="[985,1128,566,591]" italics="true" pageId="5" pageNumber="44">
|
||
<taxonomicName id="95A6DCA8FFAD6C467EED510EFBB39241" box="[985,1123,566,591]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="5" pageNumber="44" phylum="Nematoda" rank="species" species="silvester">A. silvester</taxonomicName>
|
||
,
|
||
</emphasis>
|
||
by the head offset status (slightly offset from body
|
||
<emphasis id="60D27B39FFAD6C467CFE5163FE3A927A" box="[458,490,603,628]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
distinctly offset from body), longer female body (803–941 μm
|
||
<emphasis id="60D27B39FFAD6C4679E45163FB20927A" box="[1232,1264,603,628]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
480–560 μm), longer stylet (12.5–14 μm
|
||
<emphasis id="60D27B39FFAD6C467CFB51B8FE3F9297" box="[463,495,640,665]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
9.5–10 μm), smaller female a ratio (31.5–36.3
|
||
<emphasis id="60D27B39FFAD6C46792851B8FBEC9297" box="[1052,1084,640,665]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
37–38), higher female b ratio (9.8–13
|
||
<emphasis id="60D27B39FFAD6C467DCC519EFEC892B1" box="[248,280,678,703]" italics="true" pageId="5" pageNumber="44">vs.</emphasis>
|
||
8–9.7) and the presence of males.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="1ABCF4A0FFAD6C467DF051F2FC6E935A" pageId="5" pageNumber="44" type="description">
|
||
<paragraph id="5219A72BFFAD6C467DF051F2FC6E935A" blockId="5.[151,1437,152,927]" pageId="5" pageNumber="44">
|
||
<emphasis id="60D27B39FFAD6C467DF051F2FDD792EA" bold="true" box="[196,519,714,740]" pageId="5" pageNumber="44">Type-locality and habitat:</emphasis>
|
||
<typeStatus id="8D1D1989FFAD6C467F3B51F2FD9992EA" box="[527,585,714,740]" pageId="5" pageNumber="44">Type</typeStatus>
|
||
specimens were obtained from a two-week-old culture on
|
||
<taxonomicName id="95A6DCA8FFAD6C4679C851F3FAA392EA" box="[1276,1395,715,740]" class="Sordariomycetes" family="Amphisphaeriaceae" genus="Pestalotia" kingdom="Fungi" order="Xylariales" pageId="5" pageNumber="44" phylum="Ascomycota" rank="genus">
|
||
<emphasis id="60D27B39FFAD6C4679C851F3FAA392EA" box="[1276,1395,715,740]" italics="true" pageId="5" pageNumber="44">Pestalotia</emphasis>
|
||
</taxonomicName>
|
||
sp. The culture was initiated from one female and one male of
|
||
<taxonomicName id="95A6DCA8FFAD6C467E4651C8FBC89307" box="[882,1048,752,777]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="5" pageNumber="44" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFAD6C467E4651C8FBC89307" box="[882,1048,752,777]" italics="true" pageId="5" pageNumber="44">A. fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="7BE1C642FFAD6C46791651C8FBB79304" box="[1058,1127,752,778]" pageId="5" pageNumber="44" rank="species">
|
||
<emphasis id="60D27B39FFAD6C46791651C8FBB79304" bold="true" box="[1058,1127,752,778]" pageId="5" pageNumber="44">n. sp.</emphasis>
|
||
</taxonomicNameLabel>
|
||
, which were collected in
|
||
<date id="261881EBFFAD6C467DA3502DFE8F9321" box="[151,351,789,815]" pageId="5" pageNumber="44" value="2008-09">September 2008</date>
|
||
by the first two authors from the wood of dead pine tree (
|
||
<taxonomicName id="95A6DCA8FFAD6C467901502EFAC69321" box="[1077,1302,790,815]" class="Pinopsida" family="Pinaceae" genus="Pinus" kingdom="Plantae" order="Pinales" pageId="5" pageNumber="44" phylum="Tracheophyta" rank="species" species="massoniana">
|
||
<emphasis id="60D27B39FFAD6C467901502EFAC69321" box="[1077,1302,790,815]" italics="true" pageId="5" pageNumber="44">Pinus massoniana</emphasis>
|
||
</taxonomicName>
|
||
), in Xiapu County, Fujian Province (latitude
|
||
<geoCoordinate id="3792C1ECFFAD6C467F105002FD56935A" box="[548,646,826,852]" direction="north" orientation="latitude" pageId="5" pageNumber="44" precision="5555" value="26.9">N 26.9 º</geoCoordinate>
|
||
, longitude E 120º),
|
||
<collectingCountry id="2AB1E7BBFFAD6C467E445002FC6A935A" box="[880,954,826,852]" name="China" pageId="5" pageNumber="44">China</collectingCountry>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="1ABCF4A0FFAD6C457DF25058FB90910A" lastPageId="6" lastPageNumber="45" pageId="5" pageNumber="44" type="etymology">
|
||
<paragraph id="5219A72BFFAD6C467DF25058FED89391" blockId="5.[151,1437,152,927]" pageId="5" pageNumber="44">
|
||
<emphasis id="60D27B39FFAD6C467DF25058FE879374" bold="true" box="[198,343,864,890]" pageId="5" pageNumber="44">Etymology:</emphasis>
|
||
The specific epithet is derived from Fujian Province, where the new species was originally collected.
|
||
</paragraph>
|
||
<caption id="06D9F7A3FFAD6C467DA3548FFE1397E0" httpUri="https://zenodo.org/record/196023/files/figure.png" pageId="5" pageNumber="44" targetBox="[151,1435,984,1951]" targetPageId="5">
|
||
<paragraph id="5219A72BFFAD6C467DA3548FFE1397E0" blockId="5.[151,1436,1975,2030]" pageId="5" pageNumber="44">
|
||
<emphasis id="60D27B39FFAD6C467DA3548FFEC997C1" bold="true" box="[151,281,1975,1999]" pageId="5" pageNumber="44">FIGURE 3.</emphasis>
|
||
Scanning Electron Microscopy (SEM) observation of
|
||
<taxonomicName id="95A6DCA8FFAD6C467E54548FFB5397C0" box="[864,1155,1975,1998]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="5" pageNumber="44" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFAD6C467E54548FFB5397C0" box="[864,1155,1975,1998]" italics="true" pageId="5" pageNumber="44">Aphelenchoides fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<emphasis id="60D27B39FFAD6C4679BE548FFB0F97C1" bold="true" box="[1162,1247,1975,1999]" pageId="5" pageNumber="44">
|
||
<taxonomicNameLabel id="7BE1C642FFAD6C4679BE548FFB1697C1" box="[1162,1222,1975,1999]" pageId="5" pageNumber="44" rank="species">n. sp.</taxonomicNameLabel>
|
||
A
|
||
</emphasis>
|
||
: Female head. B: Female tail. C–D: Male tail.
|
||
</paragraph>
|
||
</caption>
|
||
<paragraph id="5219A72BFFAE6C457DA353AFFB90910A" blockId="6.[151,1436,151,201]" lastBlockId="6.[165,1245,239,1234]" pageId="6" pageNumber="45">
|
||
<emphasis id="60D27B39FFAE6C457DA353AFFED290A1" bold="true" box="[151,258,151,175]" pageId="6" pageNumber="45">TABLE 2</emphasis>
|
||
Morphometrics of
|
||
<taxonomicName id="95A6DCA8FFAE6C457CE053A0FD2790A1" box="[468,759,152,175]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFAE6C457CE053A0FD2790A1" box="[468,759,152,175]" italics="true" pageId="6" pageNumber="45">Aphelenchoides fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="7BE1C642FFAE6C457FCB53AFFCEB90A1" box="[767,827,151,175]" pageId="6" pageNumber="45" rank="species">
|
||
<emphasis id="60D27B39FFAE6C457FCB53AFFCEB90A1" bold="true" box="[767,827,151,175]" pageId="6" pageNumber="45">n. sp.</emphasis>
|
||
</taxonomicNameLabel>
|
||
[Measurements are in μm and in the format: mean ± SD (range)] Male Female
|
||
</paragraph>
|
||
</subSubSection>
|
||
<paragraph id="5219A72BFFAE6C457D915206FB0D94B8" blockId="6.[165,1245,239,1234]" pageId="6" pageNumber="45">
|
||
<table id="20A6558BFFAE93BC7D91522EFB0D94DC" box="[165,1245,278,1234]" gridcols="3" gridrows="19" pageId="6" pageNumber="45">
|
||
<tr id="EC96A569FFAE93BC7D91522EFB0D915B" box="[165,1245,278,341]" gridrow="0" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D91522EFE64915B" box="[165,436,278,341]" gridcol="0" gridrow="0" pageId="6" pageNumber="45">n</th>
|
||
<th id="AF47CC15FFAE93BC7CD8522EFC8F915B" box="[492,863,278,341]" gridcol="1" gridrow="0" pageId="6" pageNumber="45">Holotype Paratypes 1 20</th>
|
||
<th id="AF47CC15FFAE93BC7EC6522EFB0D915B" box="[1010,1245,278,341]" gridcol="2" gridrow="0" pageId="6" pageNumber="45">Paratypes 20</th>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D915254FB0D9186" box="[165,1245,364,392]" gridrow="1" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D915254FE649186" box="[165,436,364,392]" gridcol="0" gridrow="1" pageId="6" pageNumber="45">L</th>
|
||
<td id="AF47CC15FFAE93BC7CD85254FC8F9186" box="[492,863,364,392]" gridcol="1" gridrow="1" pageId="6" pageNumber="45">768 754 54 (653–843)</td>
|
||
<td id="AF47CC15FFAE93BC7EC65254FB0D9186" box="[1010,1245,364,392]" gridcol="2" gridrow="1" pageId="6" pageNumber="45">866 45 (803–941)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D9152A3FB0D91B8" box="[165,1245,411,438]" gridrow="2" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D9152A3FE6491B8" box="[165,436,411,438]" gridcol="0" gridrow="2" pageId="6" pageNumber="45">a</th>
|
||
<td id="AF47CC15FFAE93BC7CD852A3FC8F91B8" box="[492,863,411,438]" gridcol="1" gridrow="2" pageId="6" pageNumber="45">34.9 33.9 2.1 (30.2–38.0)</td>
|
||
<td id="AF47CC15FFAE93BC7EC652A3FB0D91B8" box="[1010,1245,411,438]" gridcol="2" gridrow="2" pageId="6" pageNumber="45">35.2 1.4 (31.5–36.3)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D9152F1FB0D91EB" box="[165,1245,457,485]" gridrow="3" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D9152F1FE6491EB" box="[165,436,457,485]" gridcol="0" gridrow="3" pageId="6" pageNumber="45">b</th>
|
||
<td id="AF47CC15FFAE93BC7CD852F1FC8F91EB" box="[492,863,457,485]" gridcol="1" gridrow="3" pageId="6" pageNumber="45">8.5 8.9 9.8 (7.9–14.0)</td>
|
||
<td id="AF47CC15FFAE93BC7EC652F1FB0D91EB" box="[1010,1245,457,485]" gridcol="2" gridrow="3" pageId="6" pageNumber="45">10.6 0.7 (9.8–13.0)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D9152CFFB0D921D" box="[165,1245,503,531]" gridrow="4" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D9152CFFE64921D" box="[165,436,503,531]" gridcol="0" gridrow="4" pageId="6" pageNumber="45">c</th>
|
||
<td id="AF47CC15FFAE93BC7CD852CFFC8F921D" box="[492,863,503,531]" gridcol="1" gridrow="4" pageId="6" pageNumber="45">19.2 19.6 1.3 (17.0–22.3)</td>
|
||
<td id="AF47CC15FFAE93BC7EC652CFFB0D921D" box="[1010,1245,503,531]" gridcol="2" gridrow="4" pageId="6" pageNumber="45">16.9 0.9 (15.1–18.2)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D91511EFB0D924C" box="[165,1245,550,578]" gridrow="5" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D91511EFE64924C" box="[165,436,550,578]" gridcol="0" gridrow="5" pageId="6" pageNumber="45">c</th>
|
||
<td id="AF47CC15FFAE93BC7CD8511EFC8F924C" box="[492,863,550,578]" gridcol="1" gridrow="5" pageId="6" pageNumber="45">2.9 2.6 0.2 (2.5–2.9)</td>
|
||
<td id="AF47CC15FFAE93BC7EC6511EFB0D924C" box="[1010,1245,550,578]" gridcol="2" gridrow="5" pageId="6" pageNumber="45">4.0 0.3 (3.5–4.4)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D91516CFB0D927E" box="[165,1245,596,624]" gridrow="6" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D91516CFE64927E" box="[165,436,596,624]" gridcol="0" gridrow="6" pageId="6" pageNumber="45">V or T</th>
|
||
<td id="AF47CC15FFAE93BC7CD8516CFC8F927E" box="[492,863,596,624]" gridcol="1" gridrow="6" pageId="6" pageNumber="45">64.5 67.3 6.3 (54.1–77.9)</td>
|
||
<td id="AF47CC15FFAE93BC7EC6516CFB0D927E" box="[1010,1245,596,624]" gridcol="2" gridrow="6" pageId="6" pageNumber="45">68 0.9 (67–69)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D9151BBFB0D9290" box="[165,1245,643,670]" gridrow="7" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D9151BBFE649290" box="[165,436,643,670]" gridcol="0" gridrow="7" pageId="6" pageNumber="45">Body diam.</th>
|
||
<td id="AF47CC15FFAE93BC7CD851BBFC8F9290" box="[492,863,643,670]" gridcol="1" gridrow="7" pageId="6" pageNumber="45">22 22 1.0 (20–24)</td>
|
||
<td id="AF47CC15FFAE93BC7EC651BBFB0D9290" box="[1010,1245,643,670]" gridcol="2" gridrow="7" pageId="6" pageNumber="45">25 1.5 (23–28)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D915189FB0D92C3" box="[165,1245,689,717]" gridrow="8" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D915189FE6492C3" box="[165,436,689,717]" gridcol="0" gridrow="8" pageId="6" pageNumber="45">Lip diam.</th>
|
||
<td id="AF47CC15FFAE93BC7CD85189FC8F92C3" box="[492,863,689,717]" gridcol="1" gridrow="8" pageId="6" pageNumber="45">7.5 7.0 0.6 (6.0–7.5)</td>
|
||
<td id="AF47CC15FFAE93BC7EC65189FB0D92C3" box="[1010,1245,689,717]" gridcol="2" gridrow="8" pageId="6" pageNumber="45">7.0 0.6 (6.0–7.5)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D9151E7FB0D92F5" box="[165,1245,735,763]" gridrow="9" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D9151E7FE6492F5" box="[165,436,735,763]" gridcol="0" gridrow="9" pageId="6" pageNumber="45">Lip height</th>
|
||
<td id="AF47CC15FFAE93BC7CD851E7FC8F92F5" box="[492,863,735,763]" gridcol="1" gridrow="9" pageId="6" pageNumber="45">3 2.5 0.3 (2–3)</td>
|
||
<td id="AF47CC15FFAE93BC7EC651E7FB0D92F5" box="[1010,1245,735,763]" gridcol="2" gridrow="9" pageId="6" pageNumber="45">2.5 0.2 (2–3)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D915036FB0D9324" box="[165,1245,782,810]" gridrow="10" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D915036FE649324" box="[165,436,782,810]" gridcol="0" gridrow="10" pageId="6" pageNumber="45">Stylet</th>
|
||
<td id="AF47CC15FFAE93BC7CD85036FC8F9324" box="[492,863,782,810]" gridcol="1" gridrow="10" pageId="6" pageNumber="45">14 13 0.5 (12.5–14)</td>
|
||
<td id="AF47CC15FFAE93BC7EC65036FB0D9324" box="[1010,1245,782,810]" gridcol="2" gridrow="10" pageId="6" pageNumber="45">13 0.3 (12.5–14)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D915004FB0D9356" box="[165,1245,828,856]" gridrow="11" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D915004FE649356" box="[165,436,828,856]" gridcol="0" gridrow="11" pageId="6" pageNumber="45">Metacorpus length</th>
|
||
<td id="AF47CC15FFAE93BC7CD85004FC8F9356" box="[492,863,828,856]" gridcol="1" gridrow="11" pageId="6" pageNumber="45">12.5 12.5 0.7 (10–14)</td>
|
||
<td id="AF47CC15FFAE93BC7EC65004FB0D9356" box="[1010,1245,828,856]" gridcol="2" gridrow="11" pageId="6" pageNumber="45">14.0 1.0 (12.5–16.0)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D915053FB0D9388" box="[165,1245,875,902]" gridrow="12" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D915053FE649388" box="[165,436,875,902]" gridcol="0" gridrow="12" pageId="6" pageNumber="45">Metacorpus height</th>
|
||
<td id="AF47CC15FFAE93BC7CD85053FC8F9388" box="[492,863,875,902]" gridcol="1" gridrow="12" pageId="6" pageNumber="45">16 16 0.9 (15–17.5)</td>
|
||
<td id="AF47CC15FFAE93BC7EC65053FB0D9388" box="[1010,1245,875,902]" gridcol="2" gridrow="12" pageId="6" pageNumber="45">17.5 1.1 (16–20)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D9150A1FB0D93BA" box="[165,1245,921,948]" gridrow="13" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D9150A1FE6493BA" box="[165,436,921,948]" gridcol="0" gridrow="13" pageId="6" pageNumber="45">Vulva-anus distance</th>
|
||
<td id="AF47CC15FFAE93BC7CD850A1FC8F93BA" box="[492,863,921,948]" gridcol="1" gridrow="13" pageId="6" pageNumber="45">- -</td>
|
||
<td id="AF47CC15FFAE93BC7EC650A1FB0D93BA" box="[1010,1245,921,948]" gridcol="2" gridrow="13" pageId="6" pageNumber="45">229 15.4 (205–250)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D9150FFFB0D93F0" box="[165,1245,967,1022]" gridrow="14" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D9150FFFE6493F0" box="[165,436,967,1022]" gridcol="0" gridrow="14" pageId="6" pageNumber="45">Distance anterior end to distal end of median bulb</th>
|
||
<td id="AF47CC15FFAE93BC7CD850FFFC8F93F0" box="[492,863,967,1022]" gridcol="1" gridrow="14" pageId="6" pageNumber="45">73 73 4.7 (68–83)</td>
|
||
<td id="AF47CC15FFAE93BC7EC650FFFB0D93F0" box="[1010,1245,967,1022]" gridcol="2" gridrow="14" pageId="6" pageNumber="45">73 2.7 (64–75)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D915728FB0D9425" box="[165,1245,1040,1067]" gridrow="15" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D915728FE649425" box="[165,436,1040,1067]" gridcol="0" gridrow="15" pageId="6" pageNumber="45">Tail length</th>
|
||
<td id="AF47CC15FFAE93BC7CD85728FC8F9425" box="[492,863,1040,1067]" gridcol="1" gridrow="15" pageId="6" pageNumber="45">40 39 2.4 (33–43)</td>
|
||
<td id="AF47CC15FFAE93BC7EC65728FB0D9425" box="[1010,1245,1040,1067]" gridcol="2" gridrow="15" pageId="6" pageNumber="45">51 3.0 (46–58)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D915706FB0D9454" box="[165,1245,1086,1114]" gridrow="16" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D915706FE649454" box="[165,436,1086,1114]" gridcol="0" gridrow="16" pageId="6" pageNumber="45">Post-uterine sac length</th>
|
||
<td id="AF47CC15FFAE93BC7CD85706FC8F9454" box="[492,863,1086,1114]" gridcol="1" gridrow="16" pageId="6" pageNumber="45">- -</td>
|
||
<td id="AF47CC15FFAE93BC7EC65706FB0D9454" box="[1010,1245,1086,1114]" gridcol="2" gridrow="16" pageId="6" pageNumber="45">86 11.4 (68–110)</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D915754FB0D9486" box="[165,1245,1132,1160]" gridrow="17" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D915754FE649486" box="[165,436,1132,1160]" gridcol="0" gridrow="17" pageId="6" pageNumber="45">Spicule</th>
|
||
<td id="AF47CC15FFAE93BC7CD85754FC8F9486" box="[492,863,1132,1160]" gridcol="1" gridrow="17" pageId="6" pageNumber="45">24 26 1.7 (24–30)</td>
|
||
<td id="AF47CC15FFAE93BC7EC65754FB0D9486" box="[1010,1245,1132,1160]" gridcol="2" gridrow="17" pageId="6" pageNumber="45">-</td>
|
||
</tr>
|
||
<tr id="EC96A569FFAE93BC7D9157A3FB0D94DC" box="[165,1245,1179,1234]" gridrow="18" pageId="6" pageNumber="45">
|
||
<th id="AF47CC15FFAE93BC7D9157A3FE6494DC" box="[165,436,1179,1234]" gridcol="0" gridrow="18" pageId="6" pageNumber="45">Post-uterine sac length /vulva-anus distance (%)</th>
|
||
<td id="AF47CC15FFAE93BC7CD857A3FC8F94DC" box="[492,863,1179,1234]" gridcol="1" gridrow="18" pageId="6" pageNumber="45">- -</td>
|
||
<td id="AF47CC15FFAE93BC7EC657A3FB0D94DC" box="[1010,1245,1179,1234]" gridcol="2" gridrow="18" pageId="6" pageNumber="45">37.6 4.5 (32.1–44.4)</td>
|
||
</tr>
|
||
</table>
|
||
</paragraph>
|
||
<subSubSection id="1ABCF4A0FFAE6C487DF25632FC8C920C" lastPageId="11" lastPageNumber="50" pageId="6" pageNumber="45" type="description">
|
||
<paragraph id="5219A72BFFAE6C457DF25632FC1F9694" blockId="6.[151,1437,1290,2026]" pageId="6" pageNumber="45">
|
||
<emphasis id="60D27B39FFAE6C457DF25632FC79952A" bold="true" box="[198,937,1290,1316]" pageId="6" pageNumber="45">Molecular characterizations and phylogenetic relationships</emphasis>
|
||
. For molecular analysis, the 1552 bp nearfull-length 18S rDNA and the 710 bp partial mitochondrial COI genes were sequenced. A Blastn search of
|
||
<taxonomicName id="95A6DCA8FFAE6C4578B75608FEC79560" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFAE6C4578B75608FEC79560" italics="true" pageId="6" pageNumber="45">A. fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="7BE1C642FFAE6C457C2B566DFEB39561" box="[287,355,1365,1391]" pageId="6" pageNumber="45" rank="species">
|
||
<emphasis id="60D27B39FFAE6C457C2B566DFEB39561" bold="true" box="[287,355,1365,1391]" pageId="6" pageNumber="45">n. sp.</emphasis>
|
||
</taxonomicNameLabel>
|
||
on the 18S rDNA revealed the highest match with
|
||
<taxonomicName id="95A6DCA8FFAE6C457EFC566DFBEE9560" box="[968,1086,1365,1390]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="species" species="besseyi">
|
||
<emphasis id="60D27B39FFAE6C457EFC566DFBEE9560" box="[968,1086,1365,1390]" italics="true" pageId="6" pageNumber="45">A. besseyi</emphasis>
|
||
</taxonomicName>
|
||
(GenBank accession number
|
||
<accessionNumber id="4DF53AC8FFAE6C457DA35642FECF959A" box="[151,287,1402,1428]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/AY508035" pageId="6" pageNumber="45">AY508035</accessionNumber>
|
||
). The identities of the two sequences are 97% (1528/1563) with 13 insertions/deletions (0.8%). The second highest match is
|
||
<taxonomicName id="95A6DCA8FFAE6C457CDE5698FD4395B7" box="[490,659,1440,1465]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="species" species="ritzemabosi">
|
||
<emphasis id="60D27B39FFAE6C457CDE5698FD4395B7" box="[490,659,1440,1465]" italics="true" pageId="6" pageNumber="45">A. ritzemabosi</emphasis>
|
||
</taxonomicName>
|
||
(DQ9901554) with 93% identifies (1454/1550) and 22 insertions/ deletions (0.9%). A Blastn search of
|
||
<taxonomicName id="95A6DCA8FFAE6C457F7C56FDFD3895D0" box="[584,744,1477,1502]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFAE6C457F7C56FDFD3895D0" box="[584,744,1477,1502]" italics="true" pageId="6" pageNumber="45">A. fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="7BE1C642FFAE6C457FDB56FDFCE295D1" box="[751,818,1477,1503]" pageId="6" pageNumber="45" rank="species">
|
||
<emphasis id="60D27B39FFAE6C457FDB56FDFCE295D1" bold="true" box="[751,818,1477,1503]" pageId="6" pageNumber="45">n. sp.</emphasis>
|
||
</taxonomicNameLabel>
|
||
on the mtCOI revealed the highest match with some
|
||
<taxonomicName id="95A6DCA8FFAE6C457DA356D3FEB6960A" box="[151,358,1515,1540]" class="Secernentea" family="Aphelenchidae" genus="Bursaphelenchus" kingdom="Animalia" order="Aphelenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="genus">
|
||
<emphasis id="60D27B39FFAE6C457DA356D3FEB6960A" box="[151,358,1515,1540]" italics="true" pageId="6" pageNumber="45">Bursaphelenchus</emphasis>
|
||
</taxonomicName>
|
||
species, but the identities are less than 88%. Comparing with
|
||
<taxonomicName id="95A6DCA8FFAE6C45796F56D3FB04960A" box="[1115,1236,1515,1540]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="species" species="besseyi">
|
||
<emphasis id="60D27B39FFAE6C45796F56D3FB04960A" box="[1115,1236,1515,1540]" italics="true" pageId="6" pageNumber="45">A. besseyi</emphasis>
|
||
</taxonomicName>
|
||
(
|
||
<accessionNumber id="4DF53AC8FFAE6C4579D156D2FABD960A" box="[1253,1389,1514,1540]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/EU983281" pageId="6" pageNumber="45">EU983281</accessionNumber>
|
||
),
|
||
<taxonomicName id="95A6DCA8FFAE6C4578B656D3FEC99627" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFAE6C4578B656D3FEC99627" italics="true" pageId="6" pageNumber="45">A. fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<emphasis id="60D27B39FFAE6C457C155528FEB69624" bold="true" box="[289,358,1552,1578]" pageId="6" pageNumber="45">
|
||
<taxonomicNameLabel id="7BE1C642FFAE6C457C155528FEB69624" box="[289,358,1552,1578]" pageId="6" pageNumber="45" rank="species">n. sp.</taxonomicNameLabel>
|
||
</emphasis>
|
||
has 102 variable sites with 83% identities (520/624) and no gaps indicating much higher variations in mtCOI than 18S. However, there is only 1 amino acid difference out of 197 amino acids between these two species which implied almost all the variations are on the synonymous sites for this protein coding gene and the tight phylogenetic relationships between the two species.
|
||
</paragraph>
|
||
<paragraph id="5219A72BFFAE6C457DF0559DFD4597E4" blockId="6.[151,1437,1290,2026]" pageId="6" pageNumber="45">
|
||
<figureCitation id="CA9DBBAEFFAE6C457DF0559DFED796B1" box="[196,263,1701,1727]" captionStart="FIGURE 4" captionStartId="7.[151,257,1873,1897]" captionTargetBox="[190,1292,200,1851]" captionTargetId="figure@7.[151,1436,156,1851]" captionTargetPageId="7" captionText="FIGURE 4. The 10001 st Bayesian tree inferred from 18 S under GTR + I + G model (lnL = 13396.8457; freqA = 0.2545; freqC = 0.195; freqG = 0.2611; freqT = 0.2894; R (a) = 1.0777; R (b) = 2.5109; R (c) = 1.1882; R (d) = 0.7844; R (e) = 4.1621; R (f) = 1; Pinva = 0.2802; Shape = 0.5391). Posterior probability values exceeding 50 % are given on appropriate clades." httpUri="https://zenodo.org/record/196024/files/figure.png" pageId="6" pageNumber="45">Fig. 4</figureCitation>
|
||
represents a phylogenic tree based on 18S rDNA from a multiple alignment of 1625 total characters. This dataset has 851 constant characters (52.4%). The average nucleotide composition is as follows: 25.5% A, 19.5% C, 26.1% G and 28.9% T. According to previous molecular phylogenetic analysis (
|
||
<bibRefCitation id="3637DADAFFAE6C45798055C8FA479704" author="Meldal" box="[1204,1431,1776,1802]" pageId="6" pageNumber="52" refString="Meldal, B. H. M., Debenham, N. J., De Ley, P., De Ley, I. T., Vanfleteren, J. R., Vierstraete, A. R., Bert, W., Borgonie, G., Moens, T., Tyler, P. A., Austen, M. C., Blaxter, M. L., Rogers, A. D. & Lambshead, P. J. D. (2007) An improved molecular phylogeny of the Nematoda with special emphasis on marine taxa. Molecular Phylogenetics and Evolution, 42, 622 - 636." type="journal article" year="2007">
|
||
Meldal
|
||
<emphasis id="60D27B39FFAE6C45782555C8FA949707" box="[1297,1348,1776,1801]" italics="true" pageId="6" pageNumber="45">et al</emphasis>
|
||
., 2007
|
||
</bibRefCitation>
|
||
,
|
||
<bibRefCitation id="3637DADAFFAE6C457DA3542DFEB59721" author="Zhao" box="[151,357,1813,1839]" pageId="6" pageNumber="52" refString="Zhao, Z. Q., Ye, W., Giblin-Davis, R. M., Li, D., Thomas, W. K., Davies, K. A. & Riley, I. T. (2008) Morphological and molecular analysis of six aphelenchoidoids from Australian conifers and their relationship to Bursaphelenchus (Fuchs, 1937). Nematology, 10, 663 - 678." type="journal article" year="2008">
|
||
Zhao
|
||
<emphasis id="60D27B39FFAE6C457DEA542DFEC49720" box="[222,276,1813,1838]" italics="true" pageId="6" pageNumber="45">et al</emphasis>
|
||
, 2008
|
||
</bibRefCitation>
|
||
,
|
||
<bibRefCitation id="3637DADAFFAE6C457C46542DFDA09721" author="Kanzaki" box="[370,624,1813,1839]" pageId="6" pageNumber="51" refString="Kanzaki, N., Giblin-Davis, R. M., Scheffrahn, R. H., Center, B. J. & Davies, K. A. (2009) Pseudaphelenchus yukiae n. gen., n. sp. (Tylenchina: Aphelenchoididae) associated with Cylindrotermes macrognathus (Termitidae: Termitinae) in La Selva, Costa Rica. Nematology, 11, 869 - 881." type="journal article" year="2009">
|
||
Kanzaki
|
||
<emphasis id="60D27B39FFAE6C457CD4542DFDC79720" box="[480,535,1813,1838]" italics="true" pageId="6" pageNumber="45">et al</emphasis>
|
||
., 2009
|
||
</bibRefCitation>
|
||
), there is no significantly supported natural outgroup resolved for aphelenchoidoids. For the purpose of this study, a non aphelenchoidoid species
|
||
<taxonomicName id="95A6DCA8FFAE6C4579455403FAB5975A" box="[1137,1381,1851,1876]" class="Secernentea" family="Anguinidae" genus="Ditylenchus" kingdom="Animalia" order="Tylenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="species" species="dipsaci">
|
||
<emphasis id="60D27B39FFAE6C4579455403FAB5975A" box="[1137,1381,1851,1876]" italics="true" pageId="6" pageNumber="45">Ditylenchus dipsaci</emphasis>
|
||
</taxonomicName>
|
||
was chosen as an outgroup taxon to root the tree. This tree inferred two main clades.
|
||
<taxonomicName id="95A6DCA8FFAE6C45790A5458FAAD9777" box="[1086,1405,1888,1913]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFAE6C45790A5458FAAD9777" box="[1086,1405,1888,1913]" italics="true" pageId="6" pageNumber="45">Aphelenchoides fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<emphasis id="60D27B39FFAE6C4578B05458FF6A9791" bold="true" pageId="6" pageNumber="45">
|
||
<taxonomicNameLabel id="7BE1C642FFAE6C4578B05458FF6A9791" pageId="6" pageNumber="45" rank="species">n. sp.</taxonomicNameLabel>
|
||
</emphasis>
|
||
is in a 100% supported monophyletic clade with other
|
||
<taxonomicName id="95A6DCA8FFAE6C457E7754BDFC2C9790" box="[835,1020,1925,1950]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="genus">
|
||
<emphasis id="60D27B39FFAE6C457E7754BDFC2C9790" box="[835,1020,1925,1950]" italics="true" pageId="6" pageNumber="45">Aphelenchoides</emphasis>
|
||
</taxonomicName>
|
||
and
|
||
<taxonomicName id="95A6DCA8FFAE6C45790154BDFAD49790" box="[1077,1284,1925,1950]" class="Secernentea" family="Aphelenchidae" genus="Laimaphelenchus" kingdom="Animalia" order="Aphelenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="genus">
|
||
<emphasis id="60D27B39FFAE6C45790154BDFAD49790" box="[1077,1284,1925,1950]" italics="true" pageId="6" pageNumber="45">Laimaphelenchus</emphasis>
|
||
</taxonomicName>
|
||
species with teramucronate spine or star-shaped terminus, but most closest to
|
||
<taxonomicName id="95A6DCA8FFAE6C457E955493FBC997CA" box="[929,1049,1963,1988]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="species" species="besseyi">
|
||
<emphasis id="60D27B39FFAE6C457E955493FBC997CA" box="[929,1049,1963,1988]" italics="true" pageId="6" pageNumber="45">A. besseyi</emphasis>
|
||
</taxonomicName>
|
||
.
|
||
<taxonomicName id="95A6DCA8FFAE6C45791D5493FB2597CA" box="[1065,1269,1963,1988]" class="Secernentea" family="Aphelenchidae" genus="Bursaphelenchus" kingdom="Animalia" order="Aphelenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="genus">
|
||
<emphasis id="60D27B39FFAE6C45791D5493FB2597CA" box="[1065,1269,1963,1988]" italics="true" pageId="6" pageNumber="45">Bursaphelenchus</emphasis>
|
||
</taxonomicName>
|
||
is placed in a separate clade far from
|
||
<taxonomicName id="95A6DCA8FFAE6C457C9F54E8FD9B97E7" box="[427,587,2000,2025]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="6" pageNumber="45" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFAE6C457C9F54E8FD9B97E7" box="[427,587,2000,2025]" italics="true" pageId="6" pageNumber="45">A. fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="7BE1C642FFAE6C457F6654E8FD4597E4" box="[594,661,2000,2026]" pageId="6" pageNumber="45" rank="species">
|
||
<emphasis id="60D27B39FFAE6C457F6654E8FD4597E4" bold="true" box="[594,661,2000,2026]" pageId="6" pageNumber="45">n. sp.</emphasis>
|
||
</taxonomicNameLabel>
|
||
</paragraph>
|
||
<caption id="06D9F7A3FFAF6C447DA35469FABD97A6" httpUri="https://zenodo.org/record/196024/files/figure.png" pageId="7" pageNumber="46" targetBox="[190,1292,200,1851]" targetPageId="7">
|
||
<paragraph id="5219A72BFFAF6C447DA35469FABD97A6" blockId="7.[151,1436,1873,1960]" pageId="7" pageNumber="46">
|
||
<emphasis id="60D27B39FFAF6C447DA35469FECD9767" bold="true" box="[151,285,1873,1897]" pageId="7" pageNumber="46">FIGURE 4.</emphasis>
|
||
The 10001st Bayesian tree inferred from 18S under GTR+I+G model (lnL=13396.8457; freqA=0.2545; freqC=0.195; freqG=0.2611; freqT=0.2894; R(a)=1.0777; R(b)=2.5109; R(c)=1.1882; R(d)=0.7844; R(e)=4.1621; R(f)=1; Pinva=0.2802; Shape=0.5391). Posterior probability values exceeding 50% are given on appropriate clades.
|
||
</paragraph>
|
||
</caption>
|
||
<caption id="06D9F7A3FFA06C4B7DA35730FABD9451" httpUri="https://zenodo.org/record/196025/files/figure.png" pageId="8" pageNumber="47" targetBox="[191,1318,191,996]" targetPageId="8">
|
||
<paragraph id="5219A72BFFA06C4B7DA35730FABD9451" blockId="8.[151,1436,1032,1119]" pageId="8" pageNumber="47">
|
||
<emphasis id="60D27B39FFA06C4B7DA35730FECD942E" bold="true" box="[151,285,1032,1056]" pageId="8" pageNumber="47">FIGURE 5.</emphasis>
|
||
The 10001st Bayesian tree inferred from COI under TVM+I+G model (lnL=4576.3374; freqA=0.2744; freqC=0.0652; freqG=0.1429; freqT=0.5175; R(a)=0.5338; R(b)=40.2214; R(c)=1.1291; R(d)=9.7083; R(e)=40.2214; R(f)=1; Pinva=0.2936; Shape=0.1891). Posterior probability values exceeding 50% are given on appropriate clades.
|
||
</paragraph>
|
||
</caption>
|
||
<caption id="06D9F7A3FFA06C4B7DA35481FBD097DE" box="[151,1024,1977,2001]" httpUri="https://zenodo.org/record/196026/files/figure.png" pageId="8" pageNumber="47" targetBox="[164,1409,1193,1932]" targetPageId="8">
|
||
<paragraph id="5219A72BFFA06C4B7DA35481FBD097DE" blockId="8.[151,1024,1977,2001]" box="[151,1024,1977,2001]" pageId="8" pageNumber="47">
|
||
<emphasis id="60D27B39FFA06C4B7DA35481FECA97DF" bold="true" box="[151,282,1977,2001]" pageId="8" pageNumber="47">FIGURE 6.</emphasis>
|
||
Neighbor-Joining tree inferred from COI encoded protein sequences.
|
||
</paragraph>
|
||
</caption>
|
||
<paragraph id="5219A72BFFA36C487DF053A0FC8C920C" blockId="11.[151,1436,152,514]" pageId="11" pageNumber="50">
|
||
<figureCitation id="CA9DBBAEFFA36C487DF053A0FEDA90BC" box="[196,266,152,178]" captionStart="FIGURE 5" captionStartId="8.[151,257,1032,1056]" captionTargetBox="[191,1318,191,996]" captionTargetId="figure@8.[151,1436,150,1011]" captionTargetPageId="8" captionText="FIGURE 5. The 10001 st Bayesian tree inferred from COI under TVM + I + G model (lnL = 4576.3374; freqA = 0.2744; freqC = 0.0652; freqG = 0.1429; freqT = 0.5175; R (a) = 0.5338; R (b) = 40.2214; R (c) = 1.1291; R (d) = 9.7083; R (e) = 40.2214; R (f) = 1; Pinva = 0.2936; Shape = 0.1891). Posterior probability values exceeding 50 % are given on appropriate clades." httpUri="https://zenodo.org/record/196025/files/figure.png" pageId="11" pageNumber="50">Fig. 5</figureCitation>
|
||
represents a phylogenetic tree based on mtCOI from a multiple alignment of 591 total characters. This dataset has 321 constant characters (54.3%). The average nucleotide composition is as follows: 24.1% A, 11.9% C, 19.4% G and 44.5% T. This gene is A-T rich (68.6%) with a high proportion of Ts. Using
|
||
<taxonomicName id="95A6DCA8FFA36C487DA35230FE4A912F" box="[151,410,264,289]" class="Secernentea" family="Aphelenchoididae" genus="Schistonchus" higherTaxonomySource="GBIF" kingdom="Animalia" order="Aphelenchida" pageId="11" pageNumber="50" phylum="Nematoda" rank="species" species="caprifici">
|
||
<emphasis id="60D27B39FFA36C487DA35230FE4A912F" box="[151,410,264,289]" italics="true" pageId="11" pageNumber="50">Schistonchus caprifici</emphasis>
|
||
</taxonomicName>
|
||
as an outgroup taxon, this tree inferred two main clades.
|
||
<taxonomicName id="95A6DCA8FFA36C4879095230FAAD912F" box="[1085,1405,264,289]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="11" pageNumber="50" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFA36C4879095230FAAD912F" box="[1085,1405,264,289]" italics="true" pageId="11" pageNumber="50">Aphelenchoides fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="7BE1C642FFA36C4878B0523FFF6B9149" pageId="11" pageNumber="50" rank="species">
|
||
<emphasis id="60D27B39FFA36C4878B0523FFF6B9149" bold="true" pageId="11" pageNumber="50">n. sp.</emphasis>
|
||
</taxonomicNameLabel>
|
||
is in a 93% supported monophyletic clade with two
|
||
<taxonomicName id="95A6DCA8FFA36C487E0F5215FBDA9148" box="[827,1034,301,326]" class="Secernentea" family="Aphelenchidae" genus="Bursaphelenchus" kingdom="Animalia" order="Aphelenchida" pageId="11" pageNumber="50" phylum="Nematoda" rank="genus">
|
||
<emphasis id="60D27B39FFA36C487E0F5215FBDA9148" box="[827,1034,301,326]" italics="true" pageId="11" pageNumber="50">Bursaphelenchus</emphasis>
|
||
</taxonomicName>
|
||
species. This group is in a 100% supported monophyletic clade with four other
|
||
<taxonomicName id="95A6DCA8FFA36C487F8D526AFCA39165" box="[697,883,338,363]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="11" pageNumber="50" phylum="Nematoda" rank="genus">
|
||
<emphasis id="60D27B39FFA36C487F8D526AFCA39165" box="[697,883,338,363]" italics="true" pageId="11" pageNumber="50">Aphelenchoides</emphasis>
|
||
</taxonomicName>
|
||
species including
|
||
<taxonomicName id="95A6DCA8FFA36C487979526AFB129165" box="[1101,1218,338,363]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="11" pageNumber="50" phylum="Nematoda" rank="species" species="besseyi">
|
||
<emphasis id="60D27B39FFA36C487979526AFB129165" box="[1101,1218,338,363]" italics="true" pageId="11" pageNumber="50">A. besseyi</emphasis>
|
||
</taxonomicName>
|
||
. The same dataset was translated into protein sequences and a Neighbor-joining tree was generated in
|
||
<figureCitation id="CA9DBBAEFFA36C4879405240FB6C919C" box="[1140,1212,376,402]" captionStart="FIGURE 6" captionStartId="8.[151,255,1977,2001]" captionTargetBox="[164,1409,1193,1932]" captionTargetId="figure@8.[151,1436,1171,1956]" captionTargetPageId="8" captionText="FIGURE 6. Neighbor-Joining tree inferred from COI encoded protein sequences." httpUri="https://zenodo.org/record/196026/files/figure.png" pageId="11" pageNumber="50">Fig. 6</figureCitation>
|
||
. This tree revealed
|
||
<taxonomicName id="95A6DCA8FFA36C487DA352A5FEE791B8" box="[151,311,413,438]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="11" pageNumber="50" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFA36C487DA352A5FEE791B8" box="[151,311,413,438]" italics="true" pageId="11" pageNumber="50">A. fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="7BE1C642FFA36C487C0B52A5FE5391B9" box="[319,387,413,439]" pageId="11" pageNumber="50" rank="species">
|
||
<emphasis id="60D27B39FFA36C487C0B52A5FE5391B9" bold="true" box="[319,387,413,439]" pageId="11" pageNumber="50">n. sp.</emphasis>
|
||
</taxonomicNameLabel>
|
||
is close to
|
||
<taxonomicName id="95A6DCA8FFA36C487F3D52A5FD5091B8" box="[521,640,413,438]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="11" pageNumber="50" phylum="Nematoda" rank="species" species="besseyi">
|
||
<emphasis id="60D27B39FFA36C487F3D52A5FD5091B8" box="[521,640,413,438]" italics="true" pageId="11" pageNumber="50">A. besseyi</emphasis>
|
||
</taxonomicName>
|
||
and another unidentified
|
||
<taxonomicName id="95A6DCA8FFA36C487E8452A5FBBA91B8" box="[944,1130,413,438]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="11" pageNumber="50" phylum="Nematoda" rank="genus">
|
||
<emphasis id="60D27B39FFA36C487E8452A5FBBA91B8" box="[944,1130,413,438]" italics="true" pageId="11" pageNumber="50">Aphelenchoides</emphasis>
|
||
</taxonomicName>
|
||
species. Interestingly, the tree inferred from protein sequences well separated
|
||
<taxonomicName id="95A6DCA8FFA36C487FCD52FAFC4991D5" box="[761,921,450,475]" class="Secernentea" family="Aphelenchoididae" genus="Aphelenchoides" kingdom="Animalia" order="Aphelenchida" pageId="11" pageNumber="50" phylum="Nematoda" rank="species" species="fujianensis" status="sp. nov.">
|
||
<emphasis id="60D27B39FFA36C487FCD52FAFC4991D5" box="[761,921,450,475]" italics="true" pageId="11" pageNumber="50">A. fujianensis</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="7BE1C642FFA36C487E9552FAFC3391D2" box="[929,995,450,476]" pageId="11" pageNumber="50" rank="species">
|
||
<emphasis id="60D27B39FFA36C487E9552FAFC3391D2" bold="true" box="[929,995,450,476]" pageId="11" pageNumber="50">n. sp.</emphasis>
|
||
</taxonomicNameLabel>
|
||
with
|
||
<taxonomicName id="95A6DCA8FFA36C48791252FAFB2091D5" box="[1062,1264,450,475]" class="Secernentea" family="Aphelenchidae" genus="Bursaphelenchus" kingdom="Animalia" order="Aphelenchida" pageId="11" pageNumber="50" phylum="Nematoda" rank="genus">
|
||
<emphasis id="60D27B39FFA36C48791252FAFB2091D5" box="[1062,1264,450,475]" italics="true" pageId="11" pageNumber="50">Bursaphelenchus</emphasis>
|
||
</taxonomicName>
|
||
species which are in the same clade inferred from DNA sequences (
|
||
<figureCitation id="CA9DBBAEFFA36C487E3252D0FC9D920C" box="[774,845,488,514]" captionStart="FIGURE 5" captionStartId="8.[151,257,1032,1056]" captionTargetBox="[191,1318,191,996]" captionTargetId="figure@8.[151,1436,150,1011]" captionTargetPageId="8" captionText="FIGURE 5. The 10001 st Bayesian tree inferred from COI under TVM + I + G model (lnL = 4576.3374; freqA = 0.2744; freqC = 0.0652; freqG = 0.1429; freqT = 0.5175; R (a) = 0.5338; R (b) = 40.2214; R (c) = 1.1291; R (d) = 9.7083; R (e) = 40.2214; R (f) = 1; Pinva = 0.2936; Shape = 0.1891). Posterior probability values exceeding 50 % are given on appropriate clades." httpUri="https://zenodo.org/record/196025/files/figure.png" pageId="11" pageNumber="50">Fig. 5</figureCitation>
|
||
).
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |