130 lines
9.2 KiB
XML
130 lines
9.2 KiB
XML
<document ID-DOI="http://dx.doi.org/10.3897/mycokeys.43.25081" ID-GBIF-Dataset="d9c55c7b-4a9f-4045-bd20-09dd6902b3fe" ID-PMC="PMC6290043" ID-Pensoft-Pub="1314-4049--23" ID-PubMed="30568535" ModsDocAuthor="" ModsDocDate="2018" ModsDocID="1314-4049--23" ModsDocOrigin="MycoKeys " ModsDocTitle="Endophytic Colletotrichum species from Dendrobium spp. in China and Northern Thailand" checkinTime="1553125590011" checkinUser="pensoft" docAuthor="Ma, Xiaoya, Nontachaiyapoom, Sureeporn, Jayawardena, Ruvishika S., yde, Kevin D., Gentekaki, Eleni, Zhou, Sixuan, Qian, Yixin, Wen, Tingchi & Kang, Jichuan" docDate="2018" docId="7DEC3FE67FE7401A399E147A10FB66D9" docLanguage="en" docName="MycoKeys 43: 23-57" docOrigin="MycoKeys 43" docSource="http://dx.doi.org/10.3897/mycokeys.43.25081" docTitle="Colletotrichum boninense Moriwaki, Toy. Sato & Tsukib." docType="treatment" docVersion="4" lastPageNumber="41" masterDocId="FF97FFBBFFBCFFCF2B24FFA89B70FFD8" masterDocTitle="Endophytic Colletotrichum species from Dendrobium spp. in China and Northern Thailand" masterLastPageNumber="57" masterPageNumber="23" pageNumber="41" updateTime="1668136111028" updateUser="ExternalLinkService">
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<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo>
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<mods:title>Endophytic Colletotrichum species from Dendrobium spp. in China and Northern Thailand</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Ma, Xiaoya</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Nontachaiyapoom, Sureeporn</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Jayawardena, Ruvishika S.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>yde, Kevin D.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Gentekaki, Eleni</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Zhou, Sixuan</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Qian, Yixin</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Wen, Tingchi</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Kang, Jichuan</mods:namePart>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:relatedItem type="host">
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<mods:titleInfo>
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<mods:title>MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2018</mods:date>
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<mods:detail type="volume">
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<mods:number>43</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>23</mods:start>
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<mods:end>57</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:location>
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<mods:url>http://dx.doi.org/10.3897/mycokeys.43.25081</mods:url>
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</mods:location>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">http://dx.doi.org/10.3897/mycokeys.43.25081</mods:identifier>
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<mods:identifier type="Pensoft-Pub">1314-4049--23</mods:identifier>
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</mods:mods>
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<treatment ID-GBIF-Taxon="154473871" LSID="urn:lsid:plazi:treatment:7DEC3FE67FE7401A399E147A10FB66D9" httpUri="http://treatment.plazi.org/id/7DEC3FE67FE7401A399E147A10FB66D9" lastPageId="19" lastPageNumber="41" pageId="18" pageNumber="41">
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<subSubSection pageId="18" pageNumber="41" type="nomenclature">
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<paragraph pageId="18" pageNumber="41">
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<taxonomicName authority="Moriwaki, Toy. Sato & Tsukib." class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum boninense" order="Glomerellales" pageId="18" pageNumber="41" phylum="Ascomycota" rank="species" species="boninense">Colletotrichum boninense Moriwaki, Toy. Sato & Tsukib.</taxonomicName>
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<bibRefCitation author="Damm, U" journalOrPublisher="Studies in Mycology" pageId="21" pageNumber="44" pagination="1 - 36" title="The Colletotrichumboninense species complex." url="https://doi.org/10.3114/sim0002" volume="73" year="2012 a">For an illustrated description please refer Damm et al. (2012a).</bibRefCitation>
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</paragraph>
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</subSubSection>
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<subSubSection lastPageId="19" lastPageNumber="42" pageId="18" pageNumber="41" type="notes">
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<paragraph pageId="18" pageNumber="41">Notes.</paragraph>
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<paragraph lastPageId="19" lastPageNumber="42" pageId="18" pageNumber="41">
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Strains MFLUCC 14-0086, MFLUCC 14-0124 and MFLUCC 15-0261 grouped with
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<taxonomicName lsidName="C. boninense" pageId="18" pageNumber="41" rank="species" species="boninense">C. boninense</taxonomicName>
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and MFLUCC 14-0128. All have very similar sequences as those as the ex-type of with
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<taxonomicName lsidName="C. boninense" pageId="18" pageNumber="41" rank="species" species="boninense">C. boninense</taxonomicName>
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(only 2bp difference), while there was 11 base pair deviations between these strains and
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<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum doitungense" order="Botryosphaeriales" pageId="18" pageNumber="41" phylum="Ascomycota" rank="species" species="doitungense">Colletotrichum doitungense</taxonomicName>
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sp. nov. Blastn researches with ITS sequences of them result in 100% identity with ITS sequence of endophytic
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<taxonomicName lsidName="C. boninense" pageId="18" pageNumber="41" rank="species" species="boninense">C. boninense</taxonomicName>
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strain SL-ML18 (GenBank KP900269) isolated from
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<taxonomicName class="Lycopodiopsida" family="Lycopodiaceae" genus="Huperzia" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Huperzia serrate" order="Lycopodiales" pageId="18" pageNumber="41" phylum="Tracheophyta" rank="species" species="serrate">Huperzia serrate</taxonomicName>
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in China (
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<bibRefCitation author="Wang, Y" journalOrPublisher="World Journal of Microbiology & Biotechnology" pageId="26" pageNumber="49" pagination=": 20" title="Isolation, diversity and acetylcholinesterase inhibitory activity of the culturable endophytic fungi harboured in Huperziaserrata from Jinggang Mountain, China." url="https://doi.org/10.1007/s11274-015-1966-3" volume="32" year="2016">Wang et al. 2016</bibRefCitation>
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) and strain CGMCC 3.15168 (GenBank KC244158) as mentioned above. GAPDH and ACT sequences of them are 97% identity with
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<taxonomicName lsidName="C. boninense" pageId="18" pageNumber="41" rank="species" species="boninense">C. boninense</taxonomicName>
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CGMCC 3.15168 (GenBank KC843491) and 100% identity
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<pageBreakToken pageId="19" pageNumber="42" start="start">with</pageBreakToken>
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<taxonomicName lsidName="C. fructicola" pageId="19" pageNumber="42" rank="species" species="fructicola">C. fructicola</taxonomicName>
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strain 1104-7 (GenBank KX885159) isoalted from
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<taxonomicName class="Magnoliopsida" family="Rosaceae" genus="Malus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Malus domestica" order="Rosales" pageId="19" pageNumber="42" phylum="Tracheophyta" rank="species" species="domestica">Malus domestica</taxonomicName>
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in China (
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<bibRefCitation author="Liang, X" journalOrPublisher="BMC Genomics" pageId="23" pageNumber="46" pagination=": 171" title="Comparative analysis of the mitochondrial genomes of Colletotrichumgloeosporioides sensu lato: insights into the evolution of a fungal species complex interacting with diverse plants." url="https://doi.org/10.1186/s12864-016-3480-x" volume="18" year="2017">Liang et al. 2017</bibRefCitation>
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). TUB2 blastn result are 99% identity with
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<taxonomicName lsidName="C. fructicola" pageId="19" pageNumber="42" rank="species" species="fructicola">C. fructicola</taxonomicName>
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strain AV24 (GenBank KX786459) and
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<taxonomicName lsidName="C. gloeosporioides" pageId="19" pageNumber="42" rank="species" species="gloeosporioides">C. gloeosporioides</taxonomicName>
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strain TL-2 (GenBank KC913205) as mentioned above. Here we identify these three strains isolated from leaves of
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<taxonomicName lsidName="D. catenatum" pageId="19" pageNumber="42" rank="species" species="catenatum">D. catenatum</taxonomicName>
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and
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<taxonomicName class="Liliopsida" family="Orchidaceae" genus="Dendrobium" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Dendrobium" order="Asparagales" pageId="19" pageNumber="42" phylum="Tracheophyta" rank="genus">Dendrobium</taxonomicName>
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sp. 1, stem of
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<taxonomicName genus="D." lsidName="D." pageId="19" pageNumber="42" rank="genus">D.</taxonomicName>
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sp. 2 respectively as
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<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum boninense" order="Glomerellales" pageId="19" pageNumber="42" phylum="Ascomycota" rank="species" species="boninense">Colletotrichum boninense</taxonomicName>
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.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |