136 lines
11 KiB
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136 lines
11 KiB
XML
<document ID-DOI="http://dx.doi.org/10.3897/zookeys.757.24453" ID-GBIF-Dataset="495b8780-01c0-4cd6-a7db-b523d65c59b6" ID-PMC="PMC5958176" ID-Pensoft-Pub="1313-2970-757-85" ID-PubMed="29780268" ID-ZBK="559E4F4F7C35438089D5BA42A5D38004" ModsDocAuthor="" ModsDocDate="2018" ModsDocID="1313-2970-757-85" ModsDocOrigin="ZooKeys 757" ModsDocTitle="Filling the BINs of life: Report of an amphibian and reptile survey of the Tanintharyi (Tenasserim) Region of Myanmar, with DNA barcode data" checkinTime="1526014213240" checkinUser="pensoft" docAuthor="Mulcahy, Daniel G., Lee, Justin L., Miller, Aryeh H., Chand, Mia, Thura, Myint Kyaw & Zug, George R." docDate="2018" docId="7C77EB246C441857A4633ADF9A6B8AAC" docLanguage="en" docName="ZooKeys 757: 85-152" docOrigin="ZooKeys 757" docSource="http://dx.doi.org/10.3897/zookeys.757.24453" docTitle="Fejervarya sp. ' hp 2 ' (Clade 21 of Kotaki et al. 2010" docType="treatment" docVersion="4" lastPageNumber="85" masterDocId="56646A55FA2FE008FFFC774CFFE4FFFF" masterDocTitle="Filling the BINs of life: Report of an amphibian and reptile survey of the Tanintharyi (Tenasserim) Region of Myanmar, with DNA barcode data" masterLastPageNumber="152" masterPageNumber="85" pageNumber="85" updateTime="1668165782586" updateUser="ExternalLinkService">
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<mods:title>Filling the BINs of life: Report of an amphibian and reptile survey of the Tanintharyi (Tenasserim) Region of Myanmar, with DNA barcode data</mods:title>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Mulcahy, Daniel G.</mods:namePart>
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<mods:name type="personal">
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Lee, Justin L.</mods:namePart>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Miller, Aryeh H.</mods:namePart>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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<mods:namePart>Chand, Mia</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Thura, Myint Kyaw</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Zug, George R.</mods:namePart>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:title>ZooKeys</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2018</mods:date>
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<mods:detail type="volume">
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<mods:number>757</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>85</mods:start>
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<mods:end>152</mods:end>
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<mods:url>http://dx.doi.org/10.3897/zookeys.757.24453</mods:url>
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</mods:location>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">http://dx.doi.org/10.3897/zookeys.757.24453</mods:identifier>
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<mods:identifier type="Pensoft-Pub">1313-2970-757-85</mods:identifier>
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<mods:identifier type="ZBK">559E4F4F7C35438089D5BA42A5D38004</mods:identifier>
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<mods:identifier type="ZooBank">559E4F4F7C35438089D5BA42A5D38004</mods:identifier>
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</mods:mods>
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<treatment ID-GBIF-Taxon="143935102" LSID="urn:lsid:plazi:treatment:7C77EB246C441857A4633ADF9A6B8AAC" httpUri="http://treatment.plazi.org/id/7C77EB246C441857A4633ADF9A6B8AAC" lastPageNumber="85" pageId="0" pageNumber="85">
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<subSubSection pageId="0" pageNumber="85" type="nomenclature">
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<paragraph pageId="0" pageNumber="85">
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<taxonomicName authority="sp. ' hp 2 ' (Clade 21 of Kotaki et al. 2010)" class="Amphibia" family="Dicroglossidae" genus="Fejervarya" higherTaxonomySource="CoL" kingdom="Animalia" lsidName="Fejervarya" order="Anura" pageId="0" pageNumber="85" phylum="Chordata" rank="genus">
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Fejervarya sp.
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<normalizedToken originalValue="‘hp2’">'hp2'</normalizedToken>
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(Clade 21 of Kotaki et al. 2010)
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</taxonomicName>
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="85" type="description">
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<paragraph pageId="0" pageNumber="85">Description.</paragraph>
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<paragraph pageId="0" pageNumber="85">Medium-sized morph, adult females (7) 41.1-55.3 mm, adult males (16) 38.5-45.0 mm SVL.</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="85" type="natural history">
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<paragraph pageId="0" pageNumber="85">Natural history notes.</paragraph>
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<paragraph pageId="0" pageNumber="85">These frogs occur in a variety of human-modified habitats from drainage ditch to rice fields. All females are gravid and bear a mix of pigmented ova and small developing follicles, although only one had a full complement of pigmented ova. Presumably the other females had bred and deposited about half of their mature ova.</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="85" type="distribution">
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<paragraph pageId="0" pageNumber="85">General Distribution.</paragraph>
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<paragraph pageId="0" pageNumber="85">Western Thailand, Bangkok to Mae Hong Son and Three Pagoda Pass, to Yangon, Bago, and Tanintharyi, Myanmar.</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="85" type="molecular data">
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<paragraph pageId="0" pageNumber="85">Molecular Data.</paragraph>
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<paragraph pageId="0" pageNumber="85">
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In addition to the specimens collected in Tanintharyi, we sequenced three other individuals from Magway (USNM 587309), Yangon (MBM-JBS 19825), and Bago (USNM 587079). Our specimens were placed into two COIBINs, one containing all of the Tanintharyi specimens, and one containing the rest. The Tanintharyi specimens were placed in a pre-existing BIN (ACT3129) identified as
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<taxonomicName lsidName="F. triora" pageId="0" pageNumber="85" rank="species" species="triora">F. triora</taxonomicName>
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. The specimens in that BIN do not appear to be publicly available, though they appear to be from
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<bibRefCitation author="Grosjean, S" journalOrPublisher="Comptes Rendus Biologies" pageId="0" pageNumber="85" pagination="351 - 361" title="Improving biodiversity assessment of anuran amphibians using DNA barcoding of tadpoles. Case studies from Southeast Asia." url="http://dx.doi.org/10.1016/j.crvi.2015.03.015" volume="338" year="2015 b">Grosjean et al. (2015b)</bibRefCitation>
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. The other BIN (ADG3054) comprising our Magway, Yangon, and Bago specimens is novel. Our specimens were placed in a 16S clade with a specimen identified as
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<taxonomicName class="Amphibia" family="Dicroglossidae" genus="Fejervarya" higherTaxonomySource="CoL" kingdom="Animalia" lsidName="Fejervarya limnocharis" order="Anura" pageId="0" pageNumber="85" phylum="Chordata" rank="species" species="limnocharis">Fejervarya limnocharis</taxonomicName>
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hp2, Clade 21 from Thailand (AB277299,
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<bibRefCitation author="Kotaki, M" journalOrPublisher="Zoological Science" pageId="0" pageNumber="85" pagination="386 - 395" title="Molecular phylogeny of the diversified frogs of genus Fejervarya (Anura: Dicroglossidae)." url="http://dx.doi.org/10.2108/zsj.27.386.s1" volume="27" year="2010">Kotaki et al. 2010</bibRefCitation>
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), as well as another specimen identified as
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<taxonomicName class="Amphibia" family="Dicroglossidae" genus="Fejervarya" higherTaxonomySource="CoL" kingdom="Animalia" lsidName="Fejervarya limnocharis" order="Anura" pageId="0" pageNumber="85" phylum="Chordata" rank="species" species="limnocharis">Fejervarya limnocharis</taxonomicName>
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(AB162444,
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<bibRefCitation author="Sumida, M" journalOrPublisher="Zoological Science" pageId="0" pageNumber="85" pagination="547 - 562" title="Evolutionary relationships and reproductive isolating mechanisms in the Rice Frog (Fejervaryalimnocharis) species complex from Sri Lanka, Thailand, Taiwan and Japan, inferred from mtDNA gene sequences, allozymes, and crossing experiments." url="https://doi.org/10.2108/zsj.24.547" volume="24" year="2007">Sumida et al. 2007</bibRefCitation>
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), and specimens identified as
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<taxonomicName lsidName="F. triora" pageId="0" pageNumber="85" rank="species" species="triora">F. triora</taxonomicName>
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(
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<bibRefCitation author="Grosjean, S" journalOrPublisher="Comptes Rendus Biologies" pageId="0" pageNumber="85" pagination="351 - 361" title="Improving biodiversity assessment of anuran amphibians using DNA barcoding of tadpoles. Case studies from Southeast Asia." url="http://dx.doi.org/10.1016/j.crvi.2015.03.015" volume="338" year="2015 b">Grosjean et al. 2015b</bibRefCitation>
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, KR827756-61), all from Thailand. One of the paratypes of
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<taxonomicName lsidName="F. triora" pageId="0" pageNumber="85" rank="species" species="triora">F. triora</taxonomicName>
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(FMNH 266160), an additional specimen (FMNH 266337) from the type description (DQ860094-95,
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<bibRefCitation author="Stuart, BL" journalOrPublisher="Biology Letters" pageId="0" pageNumber="85" url="http://dx.doi.org/10.3158/0015-0754(2006)187[1:TNSOFA]2.0.CO;2" year="2006 b">Stuart et al. 2006b</bibRefCitation>
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), and a third individual (AB488883) identified as
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<taxonomicName lsidName="F. triora" pageId="0" pageNumber="85" rank="species" species="triora">F. triora</taxonomicName>
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are placed elsewhere in the phylogeny (Suppl. material 1: Fig. 3). Thus, it appears the specimens from
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<bibRefCitation author="Grosjean, S" journalOrPublisher="Comptes Rendus Biologies" pageId="0" pageNumber="85" pagination="351 - 361" title="Improving biodiversity assessment of anuran amphibians using DNA barcoding of tadpoles. Case studies from Southeast Asia." url="http://dx.doi.org/10.1016/j.crvi.2015.03.015" volume="338" year="2015 b">Grosjean et al. (2015b)</bibRefCitation>
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appear to be mis-identified, including the COIBINBOLD:ACT3129. We refer to this clade as "Fejervarya sp. hp2," belonging to the
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<normalizedToken originalValue="‘hp2,’">'hp2,'</normalizedToken>
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Clade 21 of
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<bibRefCitation author="Kotaki, M" journalOrPublisher="Zoological Science" pageId="0" pageNumber="85" pagination="386 - 395" title="Molecular phylogeny of the diversified frogs of genus Fejervarya (Anura: Dicroglossidae)." url="http://dx.doi.org/10.2108/zsj.27.386.s1" volume="27" year="2010">Kotaki et al. (2010)</bibRefCitation>
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.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="85" type="comments">
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<paragraph pageId="0" pageNumber="85">Comments.</paragraph>
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<paragraph pageId="0" pageNumber="85">Our material extends the range of this clade from Mae Hong Son and Bangkok, Thailand to the Tanintharyi, Myanmar.</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="85" type="materials_examined">
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<paragraph pageId="0" pageNumber="85">Specimens examined.</paragraph>
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<paragraph pageId="0" pageNumber="85">MBM-JBS 19825, USNM 587079, USNM 587309, USNM 587313, USNM 586880-903.</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="85" type="red list status">
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<paragraph pageId="0" pageNumber="85">Red List status.</paragraph>
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<paragraph pageId="0" pageNumber="85">NE (Not Evaluated).</paragraph>
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</subSubSection>
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</treatment>
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</document> |