144 lines
14 KiB
XML
144 lines
14 KiB
XML
<document id="6B80E2B0811B023CFF7ED22CEE2C3332" ID-CLB-Dataset="31867" ID-DOI="http://dx.doi.org/10.3897/zookeys.707.13042" ID-GBIF-Dataset="77aa16c7-25ee-4130-a594-57ed6e914df1" ID-PMC="PMC5674146" ID-Pensoft-Pub="1313-2970-707-1" ID-PubMed="29118626" ID-ZooBank="6A0BCD992749450C874B440D0C0A232C" ModsDocAuthor="" ModsDocDate="2017" ModsDocID="1313-2970-707-1" ModsDocOrigin="ZooKeys 707" ModsDocTitle="Abyssal fauna of the UK-1 polymetallic nodule exploration area, Clarion-Clipperton Zone, central Pacific Ocean: Mollusca" checkinTime="1507668034441" checkinUser="pensoft" docAuthor="Wiklund, Helena, Taylor, John D., Dahlgren, Thomas G., Todt, Christiane, Ikebe, Chiho, Rabone, Muriel & Glover, Adrian G." docDate="2017" docId="7291E21BF2CF8E6EE68AC07B1E3B32FF" docLanguage="en" docName="ZooKeys 707: 1-46" docOrigin="ZooKeys 707" docSource="http://dx.doi.org/10.3897/zookeys.707.13042" docTitle="Nucula profundorum Smith 1885" docType="treatment" docVersion="8" lastPageNumber="12" masterDocId="FFC7FFE8482EB03042654660FFF4EB7D" masterDocTitle="Abyssal fauna of the UK- 1 polymetallic nodule exploration area, Clarion-Clipperton Zone, central Pacific Ocean: Mollusca" masterLastPageNumber="46" masterPageNumber="1" pageNumber="10" updateTime="1732602783877" updateUser="ExternalLinkService">
|
||
<mods:mods id="6447DE9AEE0AE7908C5616AD322A6445" xmlns:mods="http://www.loc.gov/mods/v3">
|
||
<mods:titleInfo id="8B68AEE753B6D8B5ABCE1E75AECDC404">
|
||
<mods:title id="CA92009935F7625AD53EEDDCF68176A9">Abyssal fauna of the UK- 1 polymetallic nodule exploration area, Clarion-Clipperton Zone, central Pacific Ocean: Mollusca</mods:title>
|
||
</mods:titleInfo>
|
||
<mods:name id="C096D59CA6E80944161838856356A7A1" type="personal">
|
||
<mods:role id="53FF2339A074B42271E41611FDB967B8">
|
||
<mods:roleTerm id="60748FFD9553314AD5EFA6EF7BE929C2">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="08F0AC7E94E4CE34902F09E1A4592DBE">Wiklund, Helena</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="BDF63EAB84C92CA6D250C2FEB8618485" type="personal">
|
||
<mods:role id="F44FBBA1C2413FD84AED3D410FEEB863">
|
||
<mods:roleTerm id="DDF9D83BF487A2194858600BBA20914E">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="34562CB7F8D241AA29914A10C9EFDD8F">Taylor, John D.</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="47BB444897A5B9D71B3E2390F159A1FE" type="personal">
|
||
<mods:role id="15F4155D22988B9A3FBEA1EF30A69740">
|
||
<mods:roleTerm id="1E63CBF930C3CF336AB346F8AACB6396">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="07BE03666F71E68F89A59E5A22FE9338">Dahlgren, Thomas G.</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="F0A20917E3DA2E74AC85BC4142EFEB3D" type="personal">
|
||
<mods:role id="7177869209E7AAAC623F08038C525597">
|
||
<mods:roleTerm id="EB61FCA3F3552FCDC6A4EE55C39E4EA5">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="BD2DCE42E9BD9B3930536E72B52A6F55">Todt, Christiane</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="5C8835EA1D4A407CE6719630712468E1" type="personal">
|
||
<mods:role id="1EE564379929D132A751E8EC7DE989A2">
|
||
<mods:roleTerm id="B2DA33290DF7AB0512645DC50BD0AC8A">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="E7E54D4E01C4A57A3907199AE8744727">Ikebe, Chiho</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="67E064AB9C662F9BB30D49ABCAF1245E" type="personal">
|
||
<mods:role id="728819449630CBB195228BF495CB3C30">
|
||
<mods:roleTerm id="80EC7B72C653BDA3905A228656490336">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="F3A8AA836D710EAA5389C7761C977EB3">Rabone, Muriel</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="9430EC59A036DF650040573F42F4645F" type="personal">
|
||
<mods:role id="BEA3BEE624F45F902689AF915DAD8F44">
|
||
<mods:roleTerm id="7EE4D0CCAE91A8DA43B210F9D8C61D62">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="C8EA828C9E5728A331D609E33B7E9BE4">Glover, Adrian G.</mods:namePart>
|
||
</mods:name>
|
||
<mods:typeOfResource id="39898DF05D653A9E4EE871CA2516C223">text</mods:typeOfResource>
|
||
<mods:relatedItem id="7A2BB5ADEDD7149E636243B659865DBA" type="host">
|
||
<mods:titleInfo id="7736EB618AE22A0B79FF373DA0073C6E">
|
||
<mods:title id="160F2E6F0E7BBBC6EB00CFC0C8A612AE">ZooKeys</mods:title>
|
||
</mods:titleInfo>
|
||
<mods:part id="FD0382625A495F76D6EE398FE93997E3">
|
||
<mods:date id="4C84BFC330F1E7902DE6B526C57553E6">2017</mods:date>
|
||
<mods:detail id="DE7BAEA5C4043B8929CC80BC60FAE345" type="volume">
|
||
<mods:number id="BDA5CE45BA1C5DFCD2FE28C8ED8ACA2F">707</mods:number>
|
||
</mods:detail>
|
||
<mods:extent id="0C34698497EE14CFC068E845A2DF4834" unit="page">
|
||
<mods:start id="7E341C1C465B6585C50749C990AF013A">1</mods:start>
|
||
<mods:end id="E168B8CCE6D35E56A63C8AC026E0BA3F">46</mods:end>
|
||
</mods:extent>
|
||
</mods:part>
|
||
</mods:relatedItem>
|
||
<mods:location id="E99E94E8468072BB47905A620311DAD2">
|
||
<mods:url id="9DAE9A040820087EF1AD6E2B8DD7DE67">http://dx.doi.org/10.3897/zookeys.707.13042</mods:url>
|
||
</mods:location>
|
||
<mods:classification id="4EA422A70B7BB0867BC60DF7156362E3">journal article</mods:classification>
|
||
<mods:identifier id="F7C7933AB0CEECE927A32A025E7E0BFF" type="DOI">http://dx.doi.org/10.3897/zookeys.707.13042</mods:identifier>
|
||
<mods:identifier id="4387D4A855BC5402F212C56F17F20571" type="Pensoft-Pub">1313-2970-707-1</mods:identifier>
|
||
<mods:identifier id="36765258D077568DF272801937E287EE" type="ZooBank">6A0BCD992749450C874B440D0C0A232C</mods:identifier>
|
||
</mods:mods>
|
||
<treatment id="7291E21BF2CF8E6EE68AC07B1E3B32FF" ID-GBIF-Taxon="135489993" LSID="urn:lsid:plazi:treatment:7291E21BF2CF8E6EE68AC07B1E3B32FF" httpUri="http://treatment.plazi.org/id/7291E21BF2CF8E6EE68AC07B1E3B32FF" lastPageId="11" lastPageNumber="12" pageId="9" pageNumber="10" scope_class="Bivalvia" scope_family="Nuculidae" scope_order="Nuculanoida" scope_phylum="Mollusca" scope_subClass="Protobranchia">
|
||
<subSubSection id="12D78423F33A3179719DBBA9D3F34A96" pageId="9" pageNumber="10" type="nomenclature">
|
||
<paragraph id="980F5E2FDFE9E102EC30C22E871B6AAB" pageId="9" pageNumber="10">
|
||
<taxonomicName id="CE39D60599AC058F8787CF4A95DDC4A2" authority="Smith, 1885" authorityName="Smith" authorityYear="1885" family="Nuculidae" genus="Nucula" higherTaxonomySource="treatment-meta" kingdom="Animalia" lsidName="Nucula profundorum" order="Pholadomyoida" pageId="9" pageNumber="10" rank="species" species="profundorum">Nucula profundorum Smith, 1885</taxonomicName>
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="D566EB5301519EF76B33570AD6C68646" pageId="9" pageNumber="10" type="materials_examined">
|
||
<paragraph id="2E4155D58D5F711D0A1CD0F66501AD13" pageId="9" pageNumber="10">Material examined.</paragraph>
|
||
<paragraph id="B8AA674F52BFADD82039192BCFADF7A2" pageId="9" pageNumber="10">NHM_141 NHMUK 20170051, collected 2013-10-11, 13.75833 -116.69852, 4080 m. http://data.nhm.ac.uk/object/f2133256-1cad-4255-a5cb-bd5331417127</paragraph>
|
||
<paragraph id="07E45D07D786DFFEA0742378440140EE" pageId="9" pageNumber="10">NHM_274A NHMUK 20170052, collected 2013-10-17, 13.75583 -116.48667, 4076 m. http://data.nhm.ac.uk/object/f96a470e-237e-46b4-ba85-4c6196106071</paragraph>
|
||
<paragraph id="049C9062FA411DCE6A8485DC5504281C" pageId="9" pageNumber="10">NHM_378 NHMUK 20170053.1-2, collected 2013-10-19, 13.93307 -116.71628, 4182 m. http://data.nhm.ac.uk/object/65f8d1ed-dd6a-4265-90d2-daf07491cd76</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="2882D8A53A245939D91ADCA0DEC4B533" pageId="9" pageNumber="10" type="description">
|
||
<paragraph id="206E73FB3CB0212DD8BAF2092505B9EE" pageId="9" pageNumber="10">Description.</paragraph>
|
||
<paragraph id="838069D5182FCB407150A40F1998DE0E" pageId="9" pageNumber="10">Small, trigonal- subovate. Periostracum light brown, shiny. Sculpture of fine radial lirae. Resilifer small. Hinge teeth: 5 anterior, 4 posterior. Inner shell margin finely denticulate. Voucher NHM_274A width 2 mm, height 1.8 mm (Fig. 9).</paragraph>
|
||
<caption id="1DCA91766BBCBB9C8B636C6EE779A4BF" pageId="9" pageNumber="10">
|
||
<paragraph id="8ACC771685661A6EC1F80513DC853B22" pageId="9" pageNumber="10">
|
||
Figure 9.
|
||
<taxonomicName id="F7264AD6CDAAE6D09C7B3E224F58916F" class="Bivalvia" family="Nuculidae" genus="Nucula" higherTaxonomySource="CoL" kingdom="Animalia" lsidName="Nucula profundorum" order="Nuculida" pageId="9" pageNumber="10" phylum="Mollusca" rank="species" species="profundorum">Nucula profundorum</taxonomicName>
|
||
Smith, 1885 A Live specimen NHM_141 (for which 18S, CO1 and 16S sequences were obtained) B Live specimens NHM_274 (4 specimens from same sample) C Open shell from single individual NHM_274A with tissue sample taken for DNA sequencing
|
||
<normalizedToken id="872D00E2F9D475C56CCF4212B9A423E0" originalValue="D–E">D-E</normalizedToken>
|
||
SEM of NHM_378 valve showing hinge teeth. Scale bars: 1.5 mm (B); 0.5 mm (C). Image attribution Glover, Taylor, Dahlgren & Wiklund, 2017.
|
||
</paragraph>
|
||
</caption>
|
||
</subSubSection>
|
||
<subSubSection id="5F080B541D8654552B63B17965FB9C49" pageId="9" pageNumber="10" type="genetic data">
|
||
<paragraph id="8D9933B6BD43AFD975952A04CFF79E15" pageId="9" pageNumber="10">Genetic data.</paragraph>
|
||
<paragraph id="867D87B24835C8885A427D8B181BD70D" pageId="9" pageNumber="10">GenBank NHM_141 16S-MF157457, 18S-MF157473, COI-MF157503; NHM_274A COI-MF157512; NHM_378 16S-MF157464, COI-MF157520.</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="507BD47855D53EDF783657915FF33FCC" lastPageId="11" lastPageNumber="12" pageId="10" pageNumber="11" type="remarks">
|
||
<paragraph id="C4711EAA64FBD8DD236ECCD515665BF1" pageId="10" pageNumber="11">
|
||
<pageBreakToken id="411B20673B7AF60FB526847130B9B865" pageId="10" pageNumber="11" start="start">Remarks</pageBreakToken>
|
||
.
|
||
</paragraph>
|
||
<paragraph id="1D9FADC4ACC86C4D2F20AFE83616C2BF" lastPageId="11" lastPageNumber="12" pageId="10" pageNumber="11">
|
||
Morphologically matches
|
||
<taxonomicName id="13DD60A590A03E0E8B355309E3948AD4" class="Bivalvia" family="Nuculidae" genus="Nucula" higherTaxonomySource="CoL" kingdom="Animalia" lsidName="Nucula profundorum" order="Nuculida" pageId="10" pageNumber="11" phylum="Mollusca" rank="species" species="profundorum">Nucula profundorum</taxonomicName>
|
||
Smith, 1885 based on examination of the syntype specimens [NHMUK 1887.2.9.2919]. In the molecular analysis of nuculoid protobranchs (Fig. 12)
|
||
<taxonomicName id="B248C008993C75EC5A718A75D7E595B4" class="Bivalvia" family="Nuculidae" genus="Nucula" higherTaxonomySource="CoL" kingdom="Animalia" lsidName="Nucula profundorum" order="Nuculida" pageId="10" pageNumber="11" phylum="Mollusca" rank="species" species="profundorum">Nucula profundorum</taxonomicName>
|
||
and the Atlantic
|
||
<taxonomicName id="15CA82CFA63BCAFF513C209216EF869B" class="Bivalvia" family="Nuculidae" genus="Nucula" higherTaxonomySource="CoL" kingdom="Animalia" lsidName="Nucula atacellana" order="Nuculida" pageId="10" pageNumber="11" phylum="Mollusca" rank="species" species="atacellana">Nucula atacellana</taxonomicName>
|
||
Schenck, 1939 are well supported sister species. However the
|
||
<taxonomicName id="13ED104E48AF5106B5A90F510FC5C247" lsidName="N. profundorum" pageId="10" pageNumber="11" rank="species" species="profundorum">N. profundorum</taxonomicName>
|
||
identified from the present samples differs genetically from the
|
||
<taxonomicName id="348FF4ACD7EE342ABAD1602B4918BA56" lsidName="N. profundorum" pageId="10" pageNumber="11" rank="species" species="profundorum">N. profundorum</taxonomicName>
|
||
record in GenBank (accession nr KJ950274;
|
||
<bibRefCitation id="2AF4F129B2979D2F2E855079BB4350EB" author="Jennings, RM" journalOrPublisher="Polish Polar Research" pageId="30" pageNumber="31" pagination="261 - 278" title="Phylogeographic estimates of colonization of the deep Atlantic by the protobranch bivalve Nuculaatacellana." url="https://doi.org/10.2478/popore-2014-0017" volume="35" year="2014">Jennings and Etter 2014</bibRefCitation>
|
||
) which we believe may be misassigned. That sample came from 1045 m in the north eastern
|
||
<pageBreakToken id="3945AFC72D46FAA8EEED0EFD47878693" pageId="11" pageNumber="12" start="start">Pacific</pageBreakToken>
|
||
off San Diego (Figure 10). The shell illustrated by
|
||
<bibRefCitation id="59E53937BE39370E91F8AB9B7FDD7096" author="Coan, EV" journalOrPublisher="Santa Barbara Museum of Natural History Monographs" pageId="29" pageNumber="30" pagination="1 - 1258" title="Bivalve seashells of tropical west America: Marine bivalves from Baja California to northern Peru." volume="6" year="2012">Coan and Valentich-Scott (2012</bibRefCitation>
|
||
pl 12) as
|
||
<taxonomicName id="A7ED0424C6FDC5B200A122157A42E8E5" lsidName="N. profundorum" pageId="11" pageNumber="12" rank="species" species="profundorum">N. profundorum</taxonomicName>
|
||
has more hinge teeth. There may be a complex of morphologically similar species in the eastern Pacific. No genetic matches on GenBank.
|
||
</paragraph>
|
||
<caption id="F82F93E005F8176277062336B27B5D8A" pageId="11" pageNumber="12">
|
||
<paragraph id="03124256E4FBEF2A3B91D0955A8DCCA9" pageId="11" pageNumber="12">
|
||
Figure 10.
|
||
<taxonomicName id="8D0051AFF3826431FB8E063D5F7EA152" class="Bivalvia" family="Nuculidae" genus="Nucula" higherTaxonomySource="CoL" kingdom="Animalia" lsidName="Nucula profundorum" order="Nuculida" pageId="11" pageNumber="12" phylum="Mollusca" rank="species" species="profundorum">Nucula profundorum</taxonomicName>
|
||
Smith, 1885.
|
||
<normalizedToken id="F2008B5426C6550E0EDB37E142264344" originalValue="A–D">A-D</normalizedToken>
|
||
Syntype BMNH 1887.2.9.2919, scalebars 1mm E Type locality (red) of
|
||
<taxonomicName id="0081D4A310E5BAF08294619803204144" lsidName="N. profundorum" pageId="11" pageNumber="12" rank="species" species="profundorum">N. profundorum</taxonomicName>
|
||
from Challenger Expedition in relation to ABYSSLINE sampling location (green) and GenBank voucher specimen sampling location (white). Bathymetric data (D) from NOAA.
|
||
</paragraph>
|
||
</caption>
|
||
</subSubSection>
|
||
<subSubSection id="80C0609AFF337A025BE0E1FF1E6623C3" pageId="11" pageNumber="12" type="ecology">
|
||
<paragraph id="BAD0E0E78A1BC5FC8A4D8835D775B6AC" pageId="11" pageNumber="12">Ecology.</paragraph>
|
||
<paragraph id="2215DDDFF35320949C122090C633E192" pageId="11" pageNumber="12">The most abundant bivalve mollusc recorded in the ABYSSLINE sampling programme, frequently found in epibenthic sledge and box core samples from region of sediment and polymetallic nodules.</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |