235 lines
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235 lines
21 KiB
XML
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<mods:title id="BFA916579C082FCB2232E39AB2C454FF">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
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<mods:namePart id="F66D0F2C6D9A7CBC7E31A381849FBFB9">Zheng, Jinshui</mods:namePart>
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<mods:namePart id="FE5B6CF8416564DC0F8D194F61C44F59">Watanabe, Koichi</mods:namePart>
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<mods:title id="6CCDF2CF397209274AD1079E9CD76556">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<treatment id="0389878AFF952169DA0BFCF2FA2D6794" ID-DOI="http://doi.org/10.5281/zenodo.6309633" ID-Zenodo-Dep="6309633" LSID="urn:lsid:plazi:treatment:0389878AFF952169DA0BFCF2FA2D6794" httpUri="http://treatment.plazi.org/id/0389878AFF952169DA0BFCF2FA2D6794" lastPageNumber="2806" pageId="24" pageNumber="2806">
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<emphasis id="B954EA8EFF952169DA0BFCF2FB6C61C1" bold="true" pageId="24" pageNumber="2806">
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DESCRIPTION OF
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<taxonomicName id="4C204D1FFF952169DD02FCF2FBB961C1" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" class="Bacilli" family="Lactobacillaceae" genus="Companilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="24" pageNumber="2806" phylum="Firmicutes" rank="species" species="metriopterae" status="comb. nov.">
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<taxonomicNameLabel id="A26757F5FF952169DD29FC1FFB6C61C1" box="[1054,1219,905,934]" pageId="24" pageNumber="2806" rank="species">COMB. NOV.</taxonomicNameLabel>
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<taxonomicName id="4C204D1FFF952169DA0BFC25FB0B61AC" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[828,1188,947,971]" class="Bacilli" family="Lactobacillaceae" genus="Companilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="24" pageNumber="2806" phylum="Firmicutes" rank="species" species="metriopterae">
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<emphasis id="B954EA8EFF952169DA0BFC25FB0B61AC" box="[828,1188,947,971]" italics="true" pageId="24" pageNumber="2806">Companilactobacillus metriopterae</emphasis>
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</taxonomicName>
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(me.tri.o.pte’rae. N.L. fem. gen. n.
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<taxonomicName id="4C204D1FFF952169DAB1FC45FBA5618D" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[902,1034,979,1002]" class="Bacilli" family="Lactobacillaceae" genus="Companilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="24" pageNumber="2806" phylum="Firmicutes" rank="species" species="metriopterae">
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<emphasis id="B954EA8EFF952169DAB1FC45FBA5618D" box="[902,1034,979,1002]" italics="true" pageId="24" pageNumber="2806">metriopterae</emphasis>
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of
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<emphasis id="B954EA8EFF952169DD1FFC45FB0C618D" box="[1064,1187,979,1002]" italics="true" pageId="24" pageNumber="2806">Metrioptera</emphasis>
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, the genus of grasshoppers from which the
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<typeStatus id="549B883EFF952169DAD3FC67FBBD666E" box="[996,1042,1009,1033]" pageId="24" pageNumber="2806">type</typeStatus>
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strain was isolated).
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</paragraph>
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<paragraph id="8B9F369CFF952169DA0BFB89FB636613" blockId="24.[826,1473,868,1523]" pageId="24" pageNumber="2806">
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Basonym:
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<taxonomicName id="4C204D1FFF952169DA90FB88FB1B6651" authority="Chiba et al. 2018" box="[935,1204,1054,1078]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="24" pageNumber="2806" phylum="Firmicutes" rank="species" species="metriopterae">
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<emphasis id="B954EA8EFF952169DA90FB88FB1B6651" box="[935,1204,1054,1078]" italics="true" pageId="24" pageNumber="2806">Lactobacillus metriopterae</emphasis>
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</taxonomicName>
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<collectingRegion id="49E4F87EFF952169DD8EFB88FB576651" box="[1209,1272,1054,1078]" country="Japan" name="Chiba" pageId="24" pageNumber="2806">Chiba</collectingRegion>
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<emphasis id="B954EA8EFF952169DDCAFB89FA816651" box="[1277,1326,1054,1078]" italics="true" pageId="24" pageNumber="2806">et al.</emphasis>
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2018, 1486
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<superScript id="7C559BD4FF952169DC96FB8BFA1B664C" attach="none" box="[1441,1460,1053,1067]" fontSize="6" pageId="24" pageNumber="2806">VP</superScript>
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; the species includes strains previously described as
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<taxonomicName id="4C204D1FFF952169DC69FBABFBF46613" authority="Kim et al. 2018" authorityName="Kim" authorityYear="2018" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="24" pageNumber="2806" phylum="Firmicutes" rank="species" species="terrae">
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<emphasis id="B954EA8EFF952169DC69FBABFC1B6613" italics="true" pageId="24" pageNumber="2806">Lactobacillus terrae</emphasis>
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Kim
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<emphasis id="B954EA8EFF952169DAC7FBCBFB8C6613" box="[1008,1059,1116,1140]" italics="true" pageId="24" pageNumber="2806">et al.</emphasis>
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2018
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</taxonomicName>
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[
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<bibRefCitation id="EFB14B6DFF952169DD5FFBCAFB3D6613" author="Zhao W & Gu CT" box="[1128,1170,1116,1140]" pageId="24" pageNumber="2806" pagination="1597 - 1600" refId="ref65541" refString="135. Zhao W, Gu CT. Lactobacillus terrae is a later heterotypic synonym of Lactobacillus metriopterae. Int J Syst Evol Microbiol 2019; 69: 1597 - 1600." type="journal article" year="2019">135</bibRefCitation>
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,
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<bibRefCitation id="EFB14B6DFF952169DDAAFBCAFB696613" author="Chiba M & Itabashi T & Hirai K & Sakamoto M & Ohkuma M" box="[1181,1222,1116,1140]" pageId="24" pageNumber="2806" pagination="1484 - 1489" refId="ref65573" refString="136. Chiba M, Itabashi T, Hirai K, Sakamoto M, Ohkuma M et al. Lactobacillus metriopterae sp. nov., a novel lactic acid bacterium isolated from the gut of grasshopper Metrioptera engelhardti. Int J Syst Evol Microbiol 2018; 68: 1484 - 1489." type="journal article" year="2018">136</bibRefCitation>
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]
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</paragraph>
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<paragraph id="8B9F369CFF952169DA0BFB1CFA89677B" blockId="24.[826,1473,868,1523]" pageId="24" pageNumber="2806">
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<taxonomicName id="4C204D1FFF952169DA0BFB1CFC4F66C6" box="[828,992,1162,1185]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="24" pageNumber="2806" phylum="Firmicutes" rank="species" species="metriopterae">
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<emphasis id="B954EA8EFF952169DA0BFB1CFC4F66C6" box="[828,992,1162,1185]" italics="true" pageId="24" pageNumber="2806">C. metriopterae</emphasis>
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||
forms an outgroup of
|
||
<taxonomicName id="4C204D1FFF952169DDEEFB1CFA1466C5" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" box="[1241,1467,1162,1186]" class="Bacilli" family="Lactobacillaceae" genus="Companilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="24" pageNumber="2806" phylum="Firmicutes" rank="genus">
|
||
<emphasis id="B954EA8EFF952169DDEEFB1CFA1466C5" box="[1241,1467,1162,1186]" italics="true" pageId="24" pageNumber="2806">Companilactobacillus</emphasis>
|
||
</taxonomicName>
|
||
and has the smallest genome size (1.50 Mbp) and mol% G+C content (32.8); it seems to transition to an insect associated lifestyle.
|
||
<taxonomicName id="4C204D1FFF952169DAAAFB70FBEA6699" box="[925,1093,1254,1278]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="24" pageNumber="2806" phylum="Firmicutes" rank="species" species="metriopterae">
|
||
<emphasis id="B954EA8EFF952169DAAAFB70FBEA6699" box="[925,1093,1254,1278]" italics="true" pageId="24" pageNumber="2806">C. metriopterae</emphasis>
|
||
</taxonomicName>
|
||
is pigmented and ferments fewer carbohydrates than other companilactobacilli.
|
||
</paragraph>
|
||
<paragraph id="8B9F369CFF952169DA0BFAA4FB7E670E" blockId="24.[826,1473,868,1523]" pageId="24" pageNumber="2806">
|
||
Isolated from the gut of grasshopper
|
||
<emphasis id="B954EA8EFF952169DD88FAA5FA1B672D" box="[1215,1460,1330,1354]" italics="true" pageId="24" pageNumber="2806">Metrioptera engelhardti</emphasis>
|
||
, other isolates were obtained from soil.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C33A6517FF952169DA0BFAE9FA0F67F1" box="[828,1440,1406,1431]" pageId="24" pageNumber="2806" type="materials_examined">
|
||
<paragraph id="8B9F369CFF952169DA0BFAE9FA0F67F1" blockId="24.[826,1473,868,1523]" box="[828,1440,1406,1431]" pageId="24" pageNumber="2806">
|
||
<materialsCitation id="3B483CC1FF952169DA0BFAE9FA3567EB" accessionNumber="JCM 31635" box="[828,1434,1406,1431]" collectionCode="T, JCM" pageId="24" pageNumber="2806" specimenCode="DSM 103730" specimenCount="1" typeStatus="holotype">
|
||
The
|
||
<typeStatus id="549B883EFF952169DA5DFAE9FC3767F0" box="[874,920,1407,1431]" pageId="24" pageNumber="2806">type</typeStatus>
|
||
strain is Hime 5-1
|
||
<superScript id="7C559BD4FF952169DD6AFAE8FBC867EB" attach="none" box="[1117,1127,1406,1420]" fontSize="6" pageId="24" pageNumber="2806">
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||
<collectionCode id="ED31AE59FF952169DD6AFAE8FBC867EB" box="[1117,1127,1406,1420]" name="Tavera, Department of Geology and Geophysics" pageId="24" pageNumber="2806">T</collectionCode>
|
||
</superScript>
|
||
=
|
||
<collectionCode id="ED31AE59FF952169DD43FAE9FB0767F0" box="[1140,1192,1407,1431]" country="Japan" httpUri="http://grbio.org/cool/iyky-md37" name="Japan Collection of Microorganisms" pageId="24" pageNumber="2806">JCM</collectionCode>
|
||
31635
|
||
<superScript id="7C559BD4FF952169DDD9FAE8FB5767EB" attach="none" box="[1262,1272,1406,1420]" fontSize="6" pageId="24" pageNumber="2806">
|
||
<collectionCode id="ED31AE59FF952169DDD9FAE8FB5767EB" box="[1262,1272,1406,1420]" name="Tavera, Department of Geology and Geophysics" pageId="24" pageNumber="2806">T</collectionCode>
|
||
</superScript>
|
||
=
|
||
<specimenCode id="DB869EE7FF952169DC31FAE9FA3D67F0" box="[1286,1426,1407,1431]" collectionCode="DSM" country="Germany" httpUri="http://grbio.org/cool/4644-42cg" name="Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH" pageId="24" pageNumber="2806">DSM 103730</specimenCode>
|
||
<superScript id="7C559BD4FF952169DCA5FAE8FA3567EB" attach="none" box="[1426,1434,1406,1420]" fontSize="6" pageId="24" pageNumber="2806">
|
||
<collectionCode id="ED31AE59FF952169DCA5FAE8FA3567EB" box="[1426,1434,1406,1420]" name="Tavera, Department of Geology and Geophysics" pageId="24" pageNumber="2806">T</collectionCode>
|
||
</superScript>
|
||
</materialsCitation>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C33A6517FF952169DA0BFA3BFAD067A2" box="[828,1407,1453,1477]" pageId="24" pageNumber="2806" type="description">
|
||
<paragraph id="8B9F369CFF952169DA0BFA3BFAD067A2" blockId="24.[826,1473,868,1523]" box="[828,1407,1453,1477]" pageId="24" pageNumber="2806">Genome sequence accession number: RSTD00000000.</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C33A6517FF952169DA0BFA4DFA2D6794" box="[828,1410,1499,1523]" pageId="24" pageNumber="2806" type="materials_examined">
|
||
<paragraph id="8B9F369CFF952169DA0BFA4DFA2D6794" blockId="24.[826,1473,868,1523]" box="[828,1410,1499,1523]" pageId="24" pageNumber="2806">
|
||
16S RNA gene sequence accession number:
|
||
<accessionNumber id="9473AB7FFF952169DC39FA4DFAD16794" box="[1294,1406,1499,1523]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/LC190736" pageId="24" pageNumber="2806">LC190736</accessionNumber>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |