A DNA sequence-based identification checklist for Taiwanese chondrichthyans
Author
Straube, Nicolas
Author
White, William T.
Author
Ho, Hsuan-Ching
Author
Rochel, Elisabeth
Author
Corrigan, Shannon
Author
Li, Chenhong
Author
Naylor, Gavin J. P.
text
Zootaxa
2013
3752
1
256
278
journal article
10.11646/zootaxa.3752.1.16
0486185a-4e5f-4536-8486-78389f2699d7
1175-5326
285357
5CC7B1D8-3538-4218-997C-254FAFEA27E5
Squaliolus aliae
Teng, 1959
Type
locality: Tongkang,
Taiwan
.
The four Taiwanese samples included in this analysis formed two very similar sub-clusters (Supplementary Material 1). The difference between these two sub-clusters is very small and likely due to sub-population differences or haplotype polymorphism (Supplementary Material 1).
Squalus acanthias
Chile
Pacific Ocean GN2399
Deania
cf.
profundorum
Portugal
Atlantic Ocean GN6544
100
Deania calcea
southwestern Indian Ocean GN4946
91.33
Deania quadrispinosum
1
Australia
Pacific Ocean GN2619
Deania profundorum
Japan
Pacific Ocean GN7456 100 100
Deania quadrispinosum
2
Australia
Pacific Ocean GN2543 83.33
DeaniaDeania
cfcf..
profundorumprofundorum
GN10112 HOHO225225 100
DeaniaDeania
cf.
profundorumprofundorum
GN10076 HO189
Centrophorus
cf.
zeehaani
Portugal
Atlantic Ocean GN6515 100
Centrophorus zeehaani
Australia
Indian Ocean GN4933
100
Centrophorusp
moluccensis
Australia
Indian Ocean GN4922 100
CentrophorusCentrophorus moluccensismoluccensis
GN10053 HO166
52 84
CentrophorusCentrophorus moluccensismoluccensis
GN10171 HO284
97.33
Centrophorus
cf.
lusitanicus
Madagascar
Indian Ocean GN2011
Centrophorus
sp.1
Jamaica
Atlantic Ocean GN1966
100
Centrophorus harrissoni
Australia
Pacific Ocean GN4943
65.33
Centrophorus isodon
Philippines
Pacific Ocean GN4392
84
Centrophorus
sp.3
Philippines
Pacific Ocean GN4348
100
CentrophorusCentrophorus
cf.
lusitanicuslusitanicus
GN10190 HOHO20110718ck00220110718ck0 0 2 93.33
Centrophorus
sp.2
Taiwan
Pacific Ocean GN974
94.67 96.67
CentrophorusCentrophorus
cfcf..
lusitanicuslusitanicus
GN10189 HOHO20110730ck00320110730ck003
CentrophorusCentrophorus squamosussquamosus
GN10052 HO165
100
CentrophorusCentrophorus squamosussquamosus
GN10051 HO164
100
CentrophorusCentrophorus squamosussquamosus
GN10050 HO163
100
Centrophorus squamosus
Portugal
Atlantic Ocean GN6514 100
CentrophorusCentrophorus squamosussquamosus
GN10049 HO162
Centrophorus granulosus
Portugal
Atlantic Ocean GN6615
57.33
100
CentrophorusCentrophorus granulosusgranulosus
GN10206 HOHO20110730ck01120110730ck0 11 70.67
CentrophorusCentrophorus granulosusgranulosus
GN10204 HOHO20110730ck00920110730ck0 0 9 88.67
CentrophorusCentrophorus granulosusgranulosus
GN10191 HO20110303ck003 88.67
CentrophorusCentrophorus granulosusgranulosus
GN10196 HO20110718ck007 100
CentrophorusCentrophorus granulosusgranulosus
GN10200 HO20110718ck022 53.33
CentrophorusCentrophorus granulosusgranulosus
GN10194 HO20110718ck005 64
CentrophorusCentrophorus granulosusgranulosus
GN10202 HO20110730ck007
CentrophorusCentrophorus granulosusgranulosus
GN10207 HO20110730ck012 76.67
Centrophorus granulosus
Japan
Pacific Ocean GN7425
CentrophorusCentrophorus granulosusgranulosus
GN10193 HO20110718ck004
CentrophorusCentrophorus granulosusgranulosus
GN10195 HOHO20110718ck00620110718ck0 0 6 60
CentrophorusCentrophorus granulosusgranulosus
GN10197 HOHO20110718ck01520110718ck0 15
CentrophorusCentrophorus granulosusgranulosus
GN10201 HOHO20110730ck00620110730ck0 0 6
CentrophorusCentrophorus granulosusgranulosus
GN10203 HOHO20110730ck00820110730ck0 0 8
0.04