Exploring ascomycete diversity in Yunnan II: Introducing three novel species in the suborder Massarineae (Dothideomycetes, Pleosporales) from fern and grasses
Author
Phookamsak, Rungtiwa
https://orcid.org/0000-0002-6321-8416
Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand & Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan Province, China & Honghe Center for Mountain Futures, Kunming Institute of Botany, Chinese Academy of Sciences, Honghe, 654400, Yunnan Province, China
Author
Hongsanan, Sinang
https://orcid.org/0000-0003-0550-3152
Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand & Shenzhen Key Laboratory of Microbial Genetic Engineering, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China
Author
Bhat, Darbhe Jayarama
https://orcid.org/0000-0002-3800-5910
Department of Botany and Microbiology, College of Science, King Saud University, P. O. Box 2455, Riyadh 11451, Saudi Arabia & Vishnugupta Vishwavidyapeetam, Ashoke, Gokarna 581326, India
Author
Wanasinghe, Dhanushka N.
https://orcid.org/0000-0003-1759-3933
Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan Province, China & Honghe Center for Mountain Futures, Kunming Institute of Botany, Chinese Academy of Sciences, Honghe, 654400, Yunnan Province, China & CIFOR-ICRAF China Program, World Agroforestry (ICRAF), Kunming 650201, Yunnan Province, China & Center for Mountain Futures (CMF), Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan Province, China
Author
Promputtha, Itthayakorn
https://orcid.org/0000-0003-3376-4376
Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand
Author
Suwannarach, Nakarin
https://orcid.org/0000-0002-2653-1913
Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand
Author
Kumla, Jaturong
https://orcid.org/0000-0002-3673-6541
Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand
Author
Xie, Ning
https://orcid.org/0000-0002-5866-8535
Shenzhen Key Laboratory of Microbial Genetic Engineering, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China
Author
Dawoud, Turki M.
https://orcid.org/0000-0002-1444-4185
Department of Botany and Microbiology, College of Science, King Saud University, P. O. Box 2455, Riyadh 11451, Saudi Arabia
Author
Mortimer, Peter E.
https://orcid.org/0000-0002-8507-7407
Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan Province, China & Honghe Center for Mountain Futures, Kunming Institute of Botany, Chinese Academy of Sciences, Honghe, 654400, Yunnan Province, China
Author
Xu, Jianchu
https://orcid.org/0000-0002-2485-2254
Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan Province, China & Honghe Center for Mountain Futures, Kunming Institute of Botany, Chinese Academy of Sciences, Honghe, 654400, Yunnan Province, China & CIFOR-ICRAF China Program, World Agroforestry (ICRAF), Kunming 650201, Yunnan Province, China & Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan Province, China
jxu@mail.kib.ac.cn
Author
Lumyong, Saisamorn
https://orcid.org/0000-0002-6485-414X
Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand & Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand
scboi009@gmail.com
text
MycoKeys
2024
2024-04-16
104
9
50
http://dx.doi.org/10.3897/mycokeys.104.112149
journal article
http://dx.doi.org/10.3897/mycokeys.104.112149
1314-4049-104-9
BA6C35A352D8524293F9CFED6D649F88
Bambusicola hongheensis Phookamsak, Bhat & Hongsanan
sp. nov.
Fig. 4
Etymology.
The specific epithet "
hongheensis
" refers to the locality, Honghe Hani and Yi Autonomous Prefecture (Yunnan, China), where the holotype was collected.
Figure 4.
Bambusicola hongheensis
(KUN-HKAS 129042, holotype)
A
the appearance of ascomata on the host surface
B
vertical section of an ascoma
C, D
peridia
E
pseudoparaphyses
F, G
asci embedded in pseudoparaphyses
H-K
ascospores
L, M
ascospores stained in India Ink show a thin mucilaginous sheath surrounding ascospores. Scale bars: 100
μm
(
B
); 20
μm
(
C-G
); 10
μm
(
H-M
).
Holotype.
KUN-HKAS 129042.
Description.
Saprobic on dead culm of bamboo in terrestrial habitats, visible as black, shiny, gnarled on the host surface.
Sexual morph
:
Ascomata
225-350
μm
high, 340-590
μm
diam., scattered, sometimes forming stroma with a clustered 1-3 ascomata, gregarious, semi-immersed, raised, becoming superficial, dark brown, dome-shaped to subconical or subglobose, glabrous, coriaceous, ostiolate with inconspicuous papilla.
Peridium
40-80(-130)
μm
wide at sides towards the apex, 10-25
μm
wide at the base, composed of several layers of small, dark brown pseudoparenchymatous cells, outer layer fused with host cells, arranged in
textura angularis
to
textura globulosa
, inner layer composed of 1-3 strata of flattened cells, of
textura globulosa
to
textura prismatica
, with thick, palisade-like cells at the sides.
Hamathecium
composed of 1-3
μm
wide, filiform, dense, septate, branched, pseudoparaphyses, anastomosed between and above the asci, embedded in a gelatinous matrix.
Asci
(58-)70-90(-105)(-119)
x
12-15(-17)
μm
(
x̄
= 80.5
x
13.5
μm
, SD =
+/-
13.2
x
1.8, n = 25), 8-spored, bitunicate, fissitunicate, cylindrical-clavate, shortly pedicellate, apically rounded with well-developed ocular chamber.
Ascospores
22-26(-30)
x
4.5-7
μm
(
x̄
= 24.6
x
5.4
μm
, SD =
+/-
2.3
x
0.5, n = 30), overlapping 1-3-seriate, hyaline, fusiform, slightly curved, 1-septate, occasionally 2-3-septate, slightly constricted at the septum, the upper cell slightly larger than the lower cell, smooth-walled, surrounded by a thin, indistinct, mucilaginous sheath.
Asexual morph
: Undetermined.
Distribution.
China (Yunnan).
Specimen examined.
China. Yunnan Province: Honghe Hani and Yi Autonomous Prefecture, Honghe County, rice terraces, on dead culm of bamboo, 26 Jan 2021, R. Phookamsak BN06 (KUN-HKAS 129042,
holotype
).
Notes
: As the axenic culture is not active, the sequences of SSU and
rpb2
were obtained from genomic DNA extracted from ascomata and dried culture.
Notes.
Based on the NCBI nucleotide BLAST search of ITS sequence,
Bambusicola hongheensis
(KUN-HKAS 129042) has the closest match with
B. triseptatispora
(MFLUCC 11-0166, ex-type strain) with 98.71% similarity (Identities = 535/542 with no gap) and is similar to
B. loculata
(MFLU 15-0056, ex-type strain) with 98.69% similarity (Identities = 528/535 with 1 gap) and
B. splendida
(MFLUCC 11-0611) with 98.25% similarity (Identities = 392/399 with no gap). The NCBI nucleotide BLAST search of LSU sequence indicated that
B. hongheensis
has the closest match with
B. triseptatispora
(MFLUCC 11-0166, ex-type strain) and
B. didymospora
(MFLUCC 10-0557, ex-type strain) with 100% similarity (Identities = 802/802 with no gap) and is similar to
B. loculata
(MFLU 15-0056, ex-type strain) with 99.75% similarity (Identities = 813/815 with 2 gaps) and
B. nanensis
(MFLUCC 21-0063, ex-type strain) with 99.49% similarity (Identities = 785/789 with no gap). The NCBI nucleotide BLAST search of
rpb2
sequence indicated that
B. hongheensis
has the closest match with
B. loculata
(MFLU 15-0056, ex-type strain) with 99.90% similarity (Identities = 1042/1043 with no gaps) and is also similar to
B. triseptatispora
(MFLUCC 11-0166, ex-type strain) with 97.92% similarity (Identities = 990/1011 with no gap) and
B. massarinia
(voucher MFLU 11-0389) with 93.57% similarity (Identities = 975/1042 with 4 gaps).
Phylogenetic analyses of a concatenated ITS, LSU,
rpb2
, SSU and
tef1-α
sequence dataset demonstrated that
Bambusicola hongheensis
formed a separate branch (85% ML, 1.00 PP; Fig.
1
), and clustered with
B. loculata
and
B. triseptatispora
with high support (100% ML, 1.00 PP; Fig.
1
) and also clustered with the generic type of
Bambusicola
,
B. massarinia
with significant support (73% ML, 0.99 PP; Fig.
1
). A nucleotide pairwise comparison of ITS sequence indicated that
B. hongheensis
differs from
B. triseptatispora
in 35/600 bp (5.83%), differs from
B. loculata
in 16/547 bp (2.92%) and differs from
B. massarinia
in 72/608 bp (11.84%). Whereas the nucleotide pairwise comparison of LSU sequence indicated that
B. hongheensis
is consistent with
B. triseptatispora
(0/802 bp) and
B. loculata
(1/816 bp), but differs from
B. massarinia
in 7/803 bp (0.87%). Furthermore, the nucleotide pairwise comparison of
rpb2
sequence indicated
B. hongheensis
is not significantly different from
B. loculata
(1/1043 bp), but differs from
B. triseptatispora
in 21/1012 bp (2.07%) and differs from
B. massarinia
in 68/1042 bp (6.52%).
Morphologically,
Bambusicola hongheensis
resembles
B. loculata
and
B. triseptatispora
in terms of the size range of ascomata, asci and ascospores. However,
B. hongheensis
has comparatively smaller ascomata (340-590
μm
diam. of
B. hongheensis
vs. 350-600
μm
diam. of
B. loculata
vs. 470-730
μm
diam. of
B. triseptatispora
), shorter and wider asci ((58-)70-90(-105)(-119)
x
12-15(-17)
μm
vs. 80-105
x
8-13
μm
vs. (78-)80-100(-110)
x
10-12(-14)
μm
, respectively) and sharing the size range of ascospores (22-26(-30)
x
4.5-7
μm
vs. 22-26.5
x
5-6
μm
vs. (25-)26-30(-31)
x
4-6
μm
, respectively). The ascospores of
B. hongheensis
are typically hyaline, 1-septate, whereas
B. triseptatispora
has hyaline to pale brown and 3-septate ascospores (
Dai et al. 2017
). Distinguishing
B. loculata
from
B. hongheensis
, based on morphological characteristics alone is challenging, but
B. loculata
can be differentiated by its larger ascomata and asci (
Dai et al. 2015
). However, a clear differentiation is achieved through phylogenetic evidence (Fig.
2
) and nucleotide pairwise comparison of ITS gene region (2.92% difference).