Streptomyces reniochalinae sp. nov. and Streptomyces diacarni sp. nov., from marine sponges
Author
Li, Lei
Author
Wang, Jie
Author
Zhou, Yong-jun
Author
Lin, Hou-wen
Author
Lu, Yan-hua
text
International Journal of Systematic and Evolutionary Microbiology
2019
2019-01-01
69
1
99
104
http://dx.doi.org/10.1099/ijsem.0.003109
journal article
20676
10.1099/ijsem.0.003109
c3dc5f9c-9f76-4923-8268-e788461dedd5
1466-5034
6048642
DESCRIPTION OF
STREPTOMYCES RENIOCHALINAE
SP. NOV.
Streptomyces reniochalinae
(re.ni.o.cha′ li.nae. N.L. gen. n.
reniochalinae
of the marine sponge
Reniochalina stalagmitis
).
Aerobic, Gram-stain-positive, non-motile, non-acid–alcohol-fast actinomycete that forms extensively branched substrate mycelia and white aerial hyphae which differentiated into chains of smooth-surfaced spores. Growths occurs at 20–40
Ǫ
C and at pH 6.0–11.0 with 0–15% NaCl. Gelatin, and Tweens 40 and 60 are degraded, but CMC, aesculin and Tween 80 are not. Degradation of Tween 20 and starch are weakly positive. Milk coagulation, peptonization and nitrate reduction are positive. Utilizes
L-
arabinose,
D-
arabinose, cellobiose, D- fructose, D- galactose, D- glucose, glycerol, lactose, maltose, D- mannitol, D- mannose, melibiose, L- rhamnose, D-ribose, trehalose,
D-
xylose, sodium acetate, sodium pyruvate and sodium citrate as sole carbon sources; weakly utilizes inositol and raffinose, but not dulcitol,
D-
sorbitol, sucrose or D- xylitol. Utilizes L- glutamine, L- lysine, L- proline, L- serine and L- threoninexanthine as sole nitrogen sources; weakly utilizes L- alanine, L- arginine, L- asparagine, glycine, L- histidine, hypoxanthine, L- hydroxyproline and L- leucine, but not adenine, L- aspartic acid, L- cystenine, L- glutamic acid, L-methionine, L- phenylalanine, L- tryptophan, L- tyrosine or L-valine. The cell wall contains LL- diaminopimelic acid and the whole-cell sugars are galactose, glucose and ribose. Diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylinositol are the predominant polar lipids. The menaquinone system contains MK-9(H
6
) as a major component, and MK-9(H
4
) and MK-9(H
8
) as minorities. The major fatty acids are iso-C
16: 0
, anteiso-C
15: 0
and anteiso-C
17: 0
. The G+C content is 71.9 mol% of the 7.6 Mb draft genome.
Fig. 3.
Neighbour-joining tree based on five-gene concatenated sequences (
atpD
,
gyrB
,
recA
,
rpoB
and
trpB
, 2454 nt) showing the relationships between strains LHW50302
T
, LHW51701
T
and related members of the genus
Streptomyces
.
Kitasatospora aburaviensis
NRRL
B-2218
T
was used as an outgroup. Numbers at nodes indicate levels of bootstrap support (%) based on neighbour-joining analysis of 1000 resampled datasets; only values above 50 % are shown. Asterisks (*) and crosses (‡) indicate branches that were also found using the maximum-likelihood method and the maximum-parsimony method, respectively. Bar, 0.02 substitutions per site.
The
type
strain, LHW50302
T
(=DSM 106194
T
=CCTCC AA 2018013
T
), was isolated from a
Reniochalina stalagmitis
marine sponge collected in the South
China
Sea. The GenBank accession number for the 16S rRNA gene sequence and the draft genome sequence of the type strain are
KX347891
and QOIM00000000, respectively
.